Zinc finger, C3HC4 type (RING finger)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27950 AT2G27950 AT2G27950 |
| fragaria_vesca | FvH4_3g30470 FvH4_3g30470 FvH4_3g30470 FvH4_3g30470 FvH4_3g30470 FvH4_3g30470 FvH4_3g30470 |
| malus_domestica | MD03G1127700.v1.1 MD11G1149900.v1.1 |
| prunus_persica | Prupe.6G114200_v2.0.a1 Prupe.6G114200_v2.0.a1 Prupe.6G114200_v2.0.a1 |
| pyrus_communis | pycom11g12270 |
| rosa_chinensis | RchiOBHm_Chr5g0056421 |
| rosa_laevigata | RLG00000035097 |
| rosa_multiflora | Rmu_sc0000317.1_g000039 |
| rosa_roxburghii | Rroxscaffold_1G00023890 |
| rosa_rugosa | Rorug05G0299300 Rorug05G0299400 Rorug05G0299500 Rorug05G0299600 Rorug05G0299700 Rorug05G0299700 Rorug05G0299800 Rorug05G0299900 |
| rosa_samantha | Rh5AG370300 Rh5BG381500 Rh5BG381700 Rh5CG404500 Rh5DG394500 |
| rosa_wichuraiana | Rw5G034690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 506 |
| Acc36I | ACCTGC | 1 cut(s) | 580 |
| AccB1I | GGYRCC | 1 cut(s) | 2079 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1510, 1642, 1944 |
| AccI | GTMKAC | 2 cut(s) | 16, 84 |
| AciI | CCGC | 4 cut(s) | 778, 784, 1935, 2072 |
| AclWI | GGATC | 1 cut(s) | 1521 |
| AcoI | YGGCCR | 2 cut(s) | 1009, 2105 |
| AcsI | RAATTY | 4 cut(s) | 387, 660, 1474, 2164 |
| AcuI | CTGAAG | 2 cut(s) | 1710, 1998 |
| AfaI | GTAC | 1 cut(s) | 519 |
| AfeI | AGCGCT | 1 cut(s) | 2129 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 947, 1510, 1642, 1944 |
| AgsI | TTSAA | 9 cut(s) | 459, 737, 984, 1262, 1373, 1481, 1718, 1730, 2012 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 896 |
| AjnI | CCWGG | 5 cut(s) | 240, 1542, 1635, 1755, 2082 |
| AluBI | AGCT | 9 cut(s) | 57, 142, 686, 963, 1121, 1408, 1553, 1828, 1961 |
| AluI | AGCT | 9 cut(s) | 57, 142, 686, 963, 1121, 1408, 1553, 1828, 1961 |
| Alw21I | GWGCWC | 3 cut(s) | 36, 73, 753 |
| Alw26I | GTCTC | 6 cut(s) | 376, 673, 838, 904, 1533, 1861 |
| Alw44I | GTGCAC | 1 cut(s) | 69 |
| AlwI | GGATC | 1 cut(s) | 1521 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 902 |
| Ama87I | CYCGRG | 2 cut(s) | 108, 173 |
| Aor51HI | AGCGCT | 1 cut(s) | 2129 |
| AoxI | GGCC | 5 cut(s) | 98, 634, 1009, 1745, 2105 |
| ApaLI | GTGCAC | 1 cut(s) | 69 |
| ApeKI | GCWGC | 3 cut(s) | 960, 963, 1121 |
| ApoI | RAATTY | 4 cut(s) | 387, 660, 1474, 2164 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1206, 2168 |
| AspLEI | GCGC | 1 cut(s) | 2130 |
| AspS9I | GGNCC | 3 cut(s) | 282, 1632, 1745 |
| AsuC2I | CCSGG | 2 cut(s) | 109, 110 |
| AvaI | CYCGRG | 2 cut(s) | 108, 173 |
| AvaII | GGWCC | 2 cut(s) | 282, 1632 |
| BaeGI | GKGCMC | 1 cut(s) | 73 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1090, 1123 |
| BalI | TGGCCA | 2 cut(s) | 1011, 2107 |
| BanI | GGYRCC | 1 cut(s) | 2079 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 997, 1029 |
| BauI | CACGAG | 1 cut(s) | 597 |
| BbsI | GAAGAC | 1 cut(s) | 339 |
| Bbv12I | GWGCWC | 3 cut(s) | 36, 73, 753 |
| BbvI | GCAGC | 3 cut(s) | 950, 972, 1108 |
| BccI | CCATC | 9 cut(s) | 206, 602, 850, 908, 1265, 1406, 1445, 1567, 1756 |
| BciT130I | CCWGG | 5 cut(s) | 242, 1544, 1637, 1757, 2084 |
| BciVI | GTATCC | 1 cut(s) | 1091 |
| BclI | TGATCA | 2 cut(s) | 1669, 1894 |
| BcnI | CCSGG | 2 cut(s) | 109, 110 |
| BcoDI | GTCTC | 6 cut(s) | 376, 673, 838, 904, 1533, 1861 |
| BfaI | CTAG | 2 cut(s) | 75, 1125 |
| BfmI | CTRYAG | 1 cut(s) | 1360 |
| BfoI | RGCGCY | 1 cut(s) | 2131 |
| BfuAI | ACCTGC | 1 cut(s) | 580 |
| BfuI | GTATCC | 1 cut(s) | 1091 |
| BisI | GCNGC | 4 cut(s) | 961, 964, 1122, 1935 |
| BlsI | GCNGC | 4 cut(s) | 962, 965, 1123, 1936 |
| Bme1390I | CCNGG | 7 cut(s) | 109, 110, 242, 1544, 1637, 1757, 2084 |
| Bme18I | GGWCC | 2 cut(s) | 282, 1632 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 896 |
| BmeT110I | CYCGRG | 2 cut(s) | 108, 173 |
| BmgT120I | GGNCC | 3 cut(s) | 282, 1632, 1745 |
| BmiI | GGNNCC | 4 cut(s) | 284, 1378, 1634, 2081 |
| BmrFI | CCNGG | 7 cut(s) | 109, 110, 242, 1544, 1637, 1757, 2084 |
| BmrI | ACTGGG | 1 cut(s) | 1954 |
| BmsI | GCATC | 5 cut(s) | 238, 437, 1339, 1964, 2131 |
| BmuI | ACTGGG | 1 cut(s) | 1954 |
| BpiI | GAAGAC | 1 cut(s) | 339 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 670, 702 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1829 |
| BpuEI | CTTGAG | 2 cut(s) | 164, 1484 |
| BpuMI | CCSGG | 2 cut(s) | 109, 110 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1602 |
| BsaI | GGTCTC | 3 cut(s) | 838, 1533, 1861 |
| BsaJI | CCNNGG | 4 cut(s) | 108, 286, 1093, 1635 |
| BsaWI | WCCGGW | 1 cut(s) | 651 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1530, 1560, 1979, 2009 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 947, 1510, 1642, 1944 |
| Bse118I | RCCGGY | 1 cut(s) | 636 |
| Bse1I | ACTGG | 3 cut(s) | 696, 1380, 1949 |
| Bse3DI | GCAATG | 2 cut(s) | 794, 1241 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1602 |
| BseBI | CCWGG | 5 cut(s) | 242, 1544, 1637, 1757, 2084 |
| BseDI | CCNNGG | 4 cut(s) | 108, 286, 1093, 1635 |
| BseJI | GATNNNNATC | 1 cut(s) | 1602 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 947, 1510, 1642, 1944 |
| BseMI | GCAATG | 2 cut(s) | 794, 1241 |
| BseNI | ACTGG | 3 cut(s) | 696, 1380, 1949 |
| BseSI | GKGCMC | 1 cut(s) | 73 |
| BseXI | GCAGC | 3 cut(s) | 950, 972, 1108 |
| BsgI | GTGCAG | 1 cut(s) | 292 |
| BshFI | GGCC | 5 cut(s) | 100, 636, 1011, 1747, 2107 |
| BshNI | GGYRCC | 1 cut(s) | 2079 |
| BsiHKAI | GWGCWC | 3 cut(s) | 36, 73, 753 |
| BsiHKCI | CYCGRG | 2 cut(s) | 108, 173 |
| BsiSI | CCGG | 3 cut(s) | 109, 637, 652 |
| BslFI | GGGAC | 6 cut(s) | 153, 268, 374, 1312, 1618, 1670 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 947, 1510, 1642, 1944 |
| BsmAI | GTCTC | 6 cut(s) | 376, 673, 838, 904, 1533, 1861 |
| BsmFI | GGGAC | 6 cut(s) | 153, 268, 374, 1312, 1618, 1670 |
| BsmI | GAATGC | 2 cut(s) | 786, 2023 |
| BsnI | GGCC | 5 cut(s) | 100, 636, 1011, 1747, 2107 |
| Bso31I | GGTCTC | 3 cut(s) | 838, 1533, 1861 |
| BsoBI | CYCGRG | 2 cut(s) | 108, 173 |
| Bsp1286I | GDGCHC | 3 cut(s) | 36, 73, 753 |
| Bsp143I | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| BspACI | CCGC | 4 cut(s) | 778, 784, 1935, 2072 |
| BspANI | GGCC | 5 cut(s) | 100, 636, 1011, 1747, 2107 |
| BspLI | GGNNCC | 4 cut(s) | 284, 1378, 1634, 2081 |
| BspMI | ACCTGC | 1 cut(s) | 580 |
| BspPI | GGATC | 1 cut(s) | 1521 |
| BspT107I | GGYRCC | 1 cut(s) | 2079 |
| BspTNI | GGTCTC | 3 cut(s) | 838, 1533, 1861 |
| BsrDI | GCAATG | 2 cut(s) | 794, 1241 |
| BsrFI | RCCGGY | 1 cut(s) | 636 |
| BsrI | ACTGG | 3 cut(s) | 696, 1380, 1949 |
| BssAI | RCCGGY | 1 cut(s) | 636 |
| BssECI | CCNNGG | 4 cut(s) | 108, 286, 1093, 1635 |
| BssMI | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| BssSI | CACGAG | 1 cut(s) | 597 |
| BssT1I | CCWWGG | 1 cut(s) | 286 |
| Bst2BI | CACGAG | 1 cut(s) | 597 |
| Bst2UI | CCWGG | 5 cut(s) | 242, 1544, 1637, 1757, 2084 |
| Bst4CI | ACNGT | 6 cut(s) | 365, 410, 455, 898, 1364, 1908 |
| Bst6I | CTCTTC | 1 cut(s) | 1197 |
| BstC8I | GCNNGC | 4 cut(s) | 533, 1232, 1551, 1779 |
| BstEII | GGTNACC | 1 cut(s) | 236 |
| BstH2I | RGCGCY | 1 cut(s) | 2131 |
| BstHHI | GCGC | 1 cut(s) | 2130 |
| BstKTI | GATC | 4 cut(s) | 1516, 1606, 1672, 1897 |
| BstMAI | GTCTC | 6 cut(s) | 376, 673, 838, 904, 1533, 1861 |
| BstMBI | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 257, 333, 1127, 1236, 1405 |
| BstNI | CCWGG | 5 cut(s) | 242, 1544, 1637, 1757, 2084 |
| BstNSI | RCATGY | 1 cut(s) | 2122 |
| BstPI | GGTNACC | 1 cut(s) | 236 |
| BstSCI | CCNGG | 7 cut(s) | 107, 108, 240, 1542, 1635, 1755, 2082 |
| BstSFI | CTRYAG | 1 cut(s) | 1360 |
| BstSLI | GKGCMC | 1 cut(s) | 73 |
| BstV1I | GCAGC | 3 cut(s) | 950, 972, 1108 |
| BstV2I | GAAGAC | 1 cut(s) | 339 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 856, 1506 |
| BsuI | GTATCC | 1 cut(s) | 1091 |
| BsuRI | GGCC | 5 cut(s) | 100, 636, 1011, 1747, 2107 |
| BtsI | GCAGTG | 3 cut(s) | 343, 1311, 1879 |
| BtsIMutI | CAGTG | 4 cut(s) | 343, 1311, 1387, 1879 |
| BveI | ACCTGC | 1 cut(s) | 580 |
| Cac8I | GCNNGC | 4 cut(s) | 533, 1232, 1551, 1779 |
| CaiI | CAGNNNCTG | 1 cut(s) | 902 |
| CfoI | GCGC | 1 cut(s) | 2130 |
| Cfr10I | RCCGGY | 1 cut(s) | 636 |
| Cfr13I | GGNCC | 3 cut(s) | 282, 1632, 1745 |
| Cfr9I | CCCGGG | 1 cut(s) | 108 |
| CsiI | ACCWGGT | 1 cut(s) | 1542 |
| Csp6I | GTAC | 1 cut(s) | 518 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1090, 1125, 1300, 1335 |
| CviQI | GTAC | 1 cut(s) | 518 |
| DpnI | GATC | 4 cut(s) | 1515, 1605, 1671, 1896 |
| DpnII | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| DriI | GACNNNNNGTC | 1 cut(s) | 896 |
| EaeI | YGGCCR | 2 cut(s) | 1009, 2105 |
| Eam1104I | CTCTTC | 1 cut(s) | 1197 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 896 |
| EarI | CTCTTC | 1 cut(s) | 1197 |
| Eco130I | CCWWGG | 1 cut(s) | 286 |
| Eco31I | GGTCTC | 3 cut(s) | 838, 1533, 1861 |
| Eco32I | GATATC | 1 cut(s) | 2197 |
| Eco47I | GGWCC | 2 cut(s) | 282, 1632 |
| Eco47III | AGCGCT | 1 cut(s) | 2129 |
| Eco57I | CTGAAG | 2 cut(s) | 1710, 1998 |
| Eco88I | CYCGRG | 2 cut(s) | 108, 173 |
| Eco91I | GGTNACC | 1 cut(s) | 236 |
| EcoO65I | GGTNACC | 1 cut(s) | 236 |
| EcoRI | GAATTC | 2 cut(s) | 660, 2164 |
| EcoRII | CCWGG | 5 cut(s) | 240, 1542, 1635, 1755, 2082 |
| EcoRV | GATATC | 1 cut(s) | 2197 |
| EcoT14I | CCWWGG | 1 cut(s) | 286 |
| EcoT22I | ATGCAT | 1 cut(s) | 2124 |
| ErhI | CCWWGG | 1 cut(s) | 286 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 529, 561 |
| FaqI | GGGAC | 6 cut(s) | 153, 268, 374, 1312, 1618, 1670 |
| FauNDI | CATATG | 3 cut(s) | 156, 444, 1912 |
| FbaI | TGATCA | 2 cut(s) | 1669, 1894 |
| FblI | GTMKAC | 2 cut(s) | 16, 84 |
| Fnu4HI | GCNGC | 4 cut(s) | 961, 964, 1122, 1935 |
| Fsp4HI | GCNGC | 4 cut(s) | 961, 964, 1122, 1935 |
| FspBI | CTAG | 2 cut(s) | 75, 1125 |
| GlaI | GCGC | 1 cut(s) | 2129 |
| GluI | GCNGC | 4 cut(s) | 961, 964, 1122, 1935 |
| HaeII | RGCGCY | 1 cut(s) | 2131 |
| HaeIII | GGCC | 5 cut(s) | 100, 636, 1011, 1747, 2107 |
| HapII | CCGG | 3 cut(s) | 109, 637, 652 |
| HhaI | GCGC | 1 cut(s) | 2130 |
| Hin6I | GCGC | 1 cut(s) | 2128 |
| HinP1I | GCGC | 1 cut(s) | 2128 |
| HincII | GTYRAC | 1 cut(s) | 622 |
| HindII | GTYRAC | 1 cut(s) | 622 |
| HpaI | GTTAAC | 1 cut(s) | 622 |
| HpaII | CCGG | 3 cut(s) | 109, 637, 652 |
| Hpy166II | GTNNAC | 5 cut(s) | 17, 71, 85, 622, 2147 |
| Hpy188III | TCNNGA | 9 cut(s) | 175, 395, 605, 1154, 1211, 1481, 1718, 1799, 1967 |
| Hpy8I | GTNNAC | 5 cut(s) | 17, 71, 85, 622, 2147 |
| HpyAV | CCTTC | 7 cut(s) | 72, 86, 700, 1529, 1736, 1845, 2073 |
| HpyCH4III | ACNGT | 6 cut(s) | 365, 410, 455, 898, 1364, 1908 |
| HpyCH4IV | ACGT | 1 cut(s) | 1994 |
| HpyCH4V | TGCA | 9 cut(s) | 71, 273, 428, 596, 1082, 1342, 1448, 1549, 2122 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 257, 333, 1127, 1236, 1405 |
| HpySE526I | ACGT | 1 cut(s) | 1994 |
| HspAI | GCGC | 1 cut(s) | 2128 |
| Ksp22I | TGATCA | 2 cut(s) | 1669, 1894 |
| KspAI | GTTAAC | 1 cut(s) | 622 |
| Kzo9I | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| LmnI | GCTCC | 4 cut(s) | 748, 1186, 1376, 1987 |
| Lsp1109I | GCAGC | 3 cut(s) | 950, 972, 1108 |
| LweI | GCATC | 5 cut(s) | 238, 437, 1339, 1964, 2131 |
| MabI | ACCWGGT | 1 cut(s) | 1542 |
| MaeI | CTAG | 2 cut(s) | 75, 1125 |
| MaeII | ACGT | 1 cut(s) | 1994 |
| MaeIII | GTNAC | 5 cut(s) | 236, 551, 760, 1364, 2088 |
| MalI | GATC | 4 cut(s) | 1515, 1605, 1671, 1896 |
| MboI | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| MhlI | GDGCHC | 3 cut(s) | 36, 73, 753 |
| MlsI | TGGCCA | 2 cut(s) | 1011, 2107 |
| MluNI | TGGCCA | 2 cut(s) | 1011, 2107 |
| MlyI | GAGTC | 6 cut(s) | 172, 917, 983, 1493, 2038, 2096 |
| MmeI | TCCRAC | 3 cut(s) | 223, 726, 2172 |
| Mox20I | TGGCCA | 2 cut(s) | 1011, 2107 |
| Mph1103I | ATGCAT | 1 cut(s) | 2124 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1206, 2168 |
| MscI | TGGCCA | 2 cut(s) | 1011, 2107 |
| MseI | TTAA | 2 cut(s) | 621, 701 |
| MslI | CAYNNNNRTG | 6 cut(s) | 854, 1347, 1449, 1504, 1596, 2154 |
| Msp20I | TGGCCA | 2 cut(s) | 1011, 2107 |
| MspA1I | CMGCKG | 3 cut(s) | 963, 1121, 2074 |
| MspI | CCGG | 3 cut(s) | 109, 637, 652 |
| MspR9I | CCNGG | 7 cut(s) | 109, 110, 242, 1544, 1637, 1757, 2084 |
| Mva1269I | GAATGC | 2 cut(s) | 786, 2023 |
| MvaI | CCWGG | 5 cut(s) | 242, 1544, 1637, 1757, 2084 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 257, 333, 1127, 1236, 1405 |
| NciI | CCSGG | 2 cut(s) | 109, 110 |
| NdeI | CATATG | 3 cut(s) | 156, 444, 1912 |
| NdeII | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| NlaIV | GGNNCC | 4 cut(s) | 284, 1378, 1634, 2081 |
| NmuCI | GTSAC | 3 cut(s) | 236, 551, 2088 |
| NsiI | ATGCAT | 1 cut(s) | 2124 |
| NspI | RCATGY | 1 cut(s) | 2122 |
| PaeR7I | CTCGAG | 1 cut(s) | 173 |
| PctI | GAATGC | 2 cut(s) | 786, 2023 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1206, 2168 |
| PfeI | GAWTC | 6 cut(s) | 38, 1163, 1172, 1207, 1760, 1766 |
| PflFI | GACNNNGTC | 1 cut(s) | 280 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1510, 1642, 1944 |
| PkrI | GCNGC | 4 cut(s) | 962, 965, 1123, 1936 |
| PleI | GAGTC | 6 cut(s) | 171, 917, 982, 1492, 2037, 2095 |
| PpsI | GAGTC | 6 cut(s) | 171, 917, 982, 1492, 2037, 2095 |
| PsiI | TTATAA | 1 cut(s) | 506 |
| Psp6I | CCWGG | 5 cut(s) | 240, 1542, 1635, 1755, 2082 |
| PspEI | GGTNACC | 1 cut(s) | 236 |
| PspGI | CCWGG | 5 cut(s) | 240, 1542, 1635, 1755, 2082 |
| PspN4I | GGNNCC | 4 cut(s) | 284, 1378, 1634, 2081 |
| PspPI | GGNCC | 3 cut(s) | 282, 1632, 1745 |
| PstNI | CAGNNNCTG | 1 cut(s) | 902 |
| PsyI | GACNNNGTC | 1 cut(s) | 280 |
| PvuII | CAGCTG | 2 cut(s) | 963, 1121 |
| RsaI | GTAC | 1 cut(s) | 519 |
| RsaNI | GTAC | 1 cut(s) | 518 |
| RseI | CAYNNNNRTG | 6 cut(s) | 854, 1347, 1449, 1504, 1596, 2154 |
| SaqAI | TTAA | 2 cut(s) | 621, 701 |
| SatI | GCNGC | 4 cut(s) | 961, 964, 1122, 1935 |
| Sau3AI | GATC | 4 cut(s) | 1513, 1603, 1669, 1894 |
| Sau96I | GGNCC | 3 cut(s) | 282, 1632, 1745 |
| SchI | GAGTC | 6 cut(s) | 172, 917, 983, 1493, 2038, 2096 |
| ScrFI | CCNGG | 7 cut(s) | 109, 110, 242, 1544, 1637, 1757, 2084 |
| SduI | GDGCHC | 3 cut(s) | 36, 73, 753 |
| SexAI | ACCWGGT | 1 cut(s) | 1542 |
| SfaNI | GCATC | 5 cut(s) | 238, 437, 1339, 1964, 2131 |
| SfcI | CTRYAG | 1 cut(s) | 1360 |
| Sfr274I | CTCGAG | 1 cut(s) | 173 |
| SinI | GGWCC | 2 cut(s) | 282, 1632 |
| SlaI | CTCGAG | 1 cut(s) | 173 |
| SmaI | CCCGGG | 1 cut(s) | 110 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 854, 1347, 1449, 1504, 1596, 2154 |
| SmlI | CTYRAG | 3 cut(s) | 143, 173, 1463 |
| SmoI | CTYRAG | 3 cut(s) | 143, 173, 1463 |
| SsiI | CCGC | 4 cut(s) | 778, 784, 1935, 2072 |
| SspMI | CTAG | 2 cut(s) | 75, 1125 |
| StyD4I | CCNGG | 7 cut(s) | 107, 108, 240, 1542, 1635, 1755, 2082 |
| StyI | CCWWGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 6 cut(s) | 365, 410, 455, 898, 1364, 1908 |
| TaiI | ACGT | 1 cut(s) | 1997 |
| TaqI | TCGA | 4 cut(s) | 36, 174, 802, 854 |
| TaqII | GACCGA | 1 cut(s) | 1107 |
| TauI | GCSGC | 1 cut(s) | 1937 |
| TfiI | GAWTC | 6 cut(s) | 38, 1163, 1172, 1207, 1760, 1766 |
| Tru1I | TTAA | 2 cut(s) | 621, 701 |
| Tru9I | TTAA | 2 cut(s) | 621, 701 |
| TscAI | CASTG | 4 cut(s) | 343, 1318, 1387, 1879 |
| TseFI | GTSAC | 3 cut(s) | 236, 551, 2088 |
| TseI | GCWGC | 3 cut(s) | 960, 963, 1121 |
| Tsp45I | GTSAC | 3 cut(s) | 236, 551, 2088 |
| TspGWI | ACGGA | 1 cut(s) | 1871 |
| TspMI | CCCGGG | 1 cut(s) | 108 |
| TspRI | CASTG | 4 cut(s) | 343, 1318, 1387, 1879 |
| Tth111I | GACNNNGTC | 1 cut(s) | 280 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1510, 1642, 1944 |
| VneI | GTGCAC | 1 cut(s) | 69 |
| VpaK11BI | GGWCC | 2 cut(s) | 282, 1632 |
| XapI | RAATTY | 4 cut(s) | 387, 660, 1474, 2164 |
| XceI | RCATGY | 1 cut(s) | 2122 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 293 |
| XhoI | CTCGAG | 1 cut(s) | 173 |
| XmaI | CCCGGG | 1 cut(s) | 108 |
| XmiI | GTMKAC | 2 cut(s) | 16, 84 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1206, 2168 |
| XspI | CTAG | 2 cut(s) | 75, 1125 |
| Zsp2I | ATGCAT | 1 cut(s) | 2124 |