Rorug05G0299600

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003793
Physical Location & Seq
Reverse (-)
34666097 .. 34668177
2081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0299600.1

Sequence Viewer

Length: 1794 bp
ATGAAGAGCAGGAGCCGTTTCAATCTGTTTCTCAAGGGCCTGATATTCATTGGAGTCCTTTCCTTCTGCACTGCGGTATGTAAGGGAGGTGAGTCATCGGAATTTGAATCATTGCTGAGGTTCATTAGAGCTGTTGATCCTAAACATGTATTGAATATTGGCCACAATATGCCATATTCCTGCAAGCATAAGTTGAAAGGTGTGGAATGCAACCCCGAGGGTAATAGCATAACAGAAATAAGGCTTCAAAATCTGCATCTTAGTGGCACACTTGATGTAGATTCACTATGCAAGCTCCCGAATCTACAAGTTGTTAGCTTAGCAAGAAACCGCATCCGAGGAACTATTTCTAACTCCATAGTGCACTGCACAAGACTAGCCTATTTGGATCTAAGCAACAATCTTCTGAGTGGAAGTGTGCCTAGGGCTCTGAATAAACTGAAATATCAAAGGAGATTGTACATCTCCAACAATTATTTTACTAGGGACATCCCAAGTTCGAGAGAGGAATATCAGCTTCATCCACATTTCAAGGAATCAAAGACATTACAGAGATACGGTGCCATGGACAAAGAAGAGGCAGGGCATCCAATGCGGATAATGACAGAGTCTGGGAGCCCTAGTTCTCCTCCTAAACCTGATGGTAAAAAGTGGTACAAGAGCATATTACCAGTAGTTTGTGTGATAGGACTATTTCTGGTGTTCATATTCTTTGCGGGAAGGAAGGCTGCTAATTTAGCTACTCAGAGGGAGATTCTGAAGTCACTTCAAGAGTACTCTACTCCGAAATCACCTCCAGCTAAGGTTCGACAGGAAGAGAAGCCAGTAGAGAATCAGTCAGAGCTCGTGTTCTTTGTTGAAGAGCATGAAAGTTTCAAGTTGGAGGACCTGTTTGAAGCCACAGCAGACTTGAGAAACCAGAGTTTCTGCAGCAGCCTTTACAAGGTAATACTCAAAAACAATGAACTGTATGCAGTCAAAAGGCTGAAGAAGTTGCAGGTACCCTTTGAGGAGTTTGGCCAAGCAATGAATCAGATAGGGAACATAAAGCATCCCAACATTCTGCCTCTTGTTGGTTACAATTGTACCAACGACGAAAAGCTTGTGATATATAAGTATCAAAACAATGGGAGTCTGCTAAACCTGCTTCAGGATTACACAGAAGGAAAGAGGGATTTCCCATGGAGGGTGCGGCTGTCCATAGCACACGGAATTGCAAGGGGCTTAGATTTCATATACCAGAGGTCTGATGAGTGCATCCCTCATGGGAACCTAAAGCTTTCGAACATCCTTCTTGATGAAAAGGATGAACCACTGATCAGTGAGTATGGAATTTCAAAGTTCTTTGACCCCCTGAAAGGATGTGTCATCATCTCCAATGGTTATACAGCCCCGGAGAAAGATTTATCTGAGAAAGGCGATGTTTATAGTTTTGGAGTGATTCTTCTTGAGTTACTGACTGGCAAAACTGTAGAAACAAGTGGGATGGACCTTCCTAAGTGGGTTACTGCCATGGTTAAGGAGGAGTGGACTGGTGAAGTCTTTGACAAGGAGGTTGCTAAAGCTGCAAAAGAGTGGGCATTTCCTTTGCTCAACATTGCTCTCAAGTGTGTATCAGCATTGCCACAAAATCGGCCGAGTGTAGCAGAAATTTATAAGAAGATTGAAGAGGTTATGCAGGATAATTTGAATACATCAGATTGTACTGTTGAGTGTGGAACCGATGAAGACAACTTTTGTATGCTTCACTCCATCATACCTGAGACCTGGGATACTCCTGGATCAAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

597

Amino Acids

67.71

Weight (kDa)

7.5

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 100 - 159 3.6e-07 Leucine rich repeat
Pkinase PF00069 312 - 553 4.3e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 320 - 554 3.8e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1656
Acc36I ACCTGC 2 cut(s) 988, 1152
Acc65I GGTACC 1 cut(s) 1000
AccB1I GGYRCC 2 cut(s) 560, 1000
AciI CCGC 5 cut(s) 74, 331, 595, 716, 1192
AclWI GGATC 3 cut(s) 131, 396, 1789
AcoI YGGCCR 3 cut(s) 160, 1018, 1634
AcsI RAATTY 3 cut(s) 101, 1332, 1650
AcuI CTGAAG 3 cut(s) 779, 1007, 1133
AfaI GTAC 6 cut(s) 461, 656, 776, 1002, 1087, 1705
AfiI CCNNNNNNNGG 5 cut(s) 943, 1073, 1150, 1186, 1358
AflIII ACRYGT 1 cut(s) 145
AjnI CCWGG 2 cut(s) 1766, 1777
AloI GAACNNNNNNTCC 2 cut(s) 607, 639
Alw21I GWGCWC 2 cut(s) 366, 846
Alw26I GTCTC 1 cut(s) 1757
Alw44I GTGCAC 1 cut(s) 362
AlwI GGATC 3 cut(s) 131, 396, 1789
AlwNI CAGNNNCTG 1 cut(s) 611
Ama87I CYCGRG 1 cut(s) 215
AoxI GGCC 4 cut(s) 37, 160, 1018, 1634
ApaLI GTGCAC 1 cut(s) 362
ApeKI GCWGC 4 cut(s) 728, 930, 933, 1565
ApoI RAATTY 3 cut(s) 101, 1332, 1650
Asp700I GAANNNNTTC 1 cut(s) 346
Asp718I GGTACC 1 cut(s) 1000
AspA2I CCTAGG 1 cut(s) 422
AspS9I GGNCC 3 cut(s) 37, 886, 1489
AsuC2I CCSGG 1 cut(s) 1394
AsuHPI GGTGA 3 cut(s) 101, 783, 1547
AsuII TTCGAA 1 cut(s) 1283
AvaI CYCGRG 1 cut(s) 215
AvaII GGWCC 2 cut(s) 886, 1489
AvrII CCTAGG 1 cut(s) 422
BaeGI GKGCMC 1 cut(s) 366
BaeI ACNNNNGTAYC 2 cut(s) 1069, 1102
BalI TGGCCA 2 cut(s) 162, 1020
BanI GGYRCC 2 cut(s) 560, 1000
BanII GRGCYC 3 cut(s) 430, 620, 846
BauI CACGAG 1 cut(s) 845
BbsI GAAGAC 1 cut(s) 1734
Bbv12I GWGCWC 2 cut(s) 366, 846
BbvCI CCTCAGC 1 cut(s) 116
BbvI GCAGC 4 cut(s) 715, 942, 945, 1552
BccI CCATC 3 cut(s) 635, 1480, 1760
BciT130I CCWGG 2 cut(s) 1768, 1779
BciVI GTATCC 1 cut(s) 1765
BclI TGATCA 1 cut(s) 1317
BcnI CCSGG 1 cut(s) 1394
BcoDI GTCTC 1 cut(s) 1757
BfaI CTAG 4 cut(s) 377, 423, 483, 621
BfmI CTRYAG 2 cut(s) 928, 1470
BfuAI ACCTGC 2 cut(s) 988, 1152
BfuI GTATCC 1 cut(s) 1765
BisI GCNGC 5 cut(s) 729, 931, 934, 1193, 1566
BlnI CCTAGG 1 cut(s) 422
BlpI GCTNAGC 1 cut(s) 319
BlsI GCNGC 5 cut(s) 730, 932, 935, 1194, 1567
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 3 cut(s) 1394, 1768, 1779
Bme18I GGWCC 2 cut(s) 886, 1489
BmeT110I CYCGRG 1 cut(s) 215
BmgT120I GGNCC 3 cut(s) 37, 886, 1489
BmiI GGNNCC 6 cut(s) 14, 562, 617, 1002, 1271, 1720
BmrFI CCNGG 3 cut(s) 1394, 1768, 1779
BmsI GCATC 5 cut(s) 265, 342, 595, 1060, 1266
BpiI GAAGAC 1 cut(s) 1734
BpmI CTGGAG 1 cut(s) 780
Bpu10I CCTNAGC 2 cut(s) 116, 801
Bpu1102I GCTNAGC 1 cut(s) 319
Bpu14I TTCGAA 1 cut(s) 1283
BpuEI CTTGAG 4 cut(s) 17, 931, 1469, 1589
BpuMI CCSGG 1 cut(s) 1394
BsaI GGTCTC 1 cut(s) 1757
BsaJI CCNNGG 8 cut(s) 216, 337, 422, 564, 1181, 1392, 1512, 1767
BsaXI ACNNNNNCTCC 4 cut(s) 607, 637, 875, 905
Bsc4I CCNNNNNNNGG 5 cut(s) 943, 1073, 1150, 1186, 1358
Bse1I ACTGG 4 cut(s) 671, 824, 1465, 1537
Bse3DI GCAATG 4 cut(s) 110, 1032, 1596, 1619
BseBI CCWGG 2 cut(s) 1768, 1779
BseDI CCNNGG 8 cut(s) 216, 337, 422, 564, 1181, 1392, 1512, 1767
BseLI CCNNNNNNNGG 5 cut(s) 943, 1073, 1150, 1186, 1358
BseMI GCAATG 4 cut(s) 110, 1032, 1596, 1619
BseMII CTCAG 5 cut(s) 107, 398, 758, 1401, 1752
BseNI ACTGG 4 cut(s) 671, 824, 1465, 1537
BseRI GAGGAG 3 cut(s) 618, 1025, 1538
BseSI GKGCMC 1 cut(s) 366
BseX3I CGGCCG 1 cut(s) 1634
BseXI GCAGC 4 cut(s) 715, 942, 945, 1552
BsgI GTGCAG 2 cut(s) 52, 352
Bsh1285I CGRYCG 1 cut(s) 1637
BshFI GGCC 4 cut(s) 39, 162, 1020, 1636
BshNI GGYRCC 2 cut(s) 560, 1000
BsiEI CGRYCG 1 cut(s) 1637
BsiHKAI GWGCWC 2 cut(s) 366, 846
BsiHKCI CYCGRG 1 cut(s) 215
BsiSI CCGG 1 cut(s) 1394
BslFI GGGAC 1 cut(s) 500
BslI CCNNNNNNNGG 5 cut(s) 943, 1073, 1150, 1186, 1358
BsmAI GTCTC 1 cut(s) 1757
BsmFI GGGAC 1 cut(s) 500
BsmI GAATGC 1 cut(s) 212
BsnI GGCC 4 cut(s) 39, 162, 1020, 1636
Bso31I GGTCTC 1 cut(s) 1757
BsoBI CYCGRG 1 cut(s) 215
Bsp119I TTCGAA 1 cut(s) 1283
Bsp1286I GDGCHC 4 cut(s) 366, 430, 620, 846
Bsp1407I TGTACA 1 cut(s) 459
Bsp143I GATC 4 cut(s) 136, 388, 1317, 1781
Bsp1720I GCTNAGC 1 cut(s) 319
Bsp19I CCATGG 3 cut(s) 564, 1181, 1512
BspACI CCGC 5 cut(s) 74, 331, 595, 716, 1192
BspANI GGCC 4 cut(s) 39, 162, 1020, 1636
BspCNI CTCAG 5 cut(s) 108, 399, 757, 1402, 1753
BspLI GGNNCC 6 cut(s) 14, 562, 617, 1002, 1271, 1720
BspMAI CTGCAG 1 cut(s) 932
BspMI ACCTGC 2 cut(s) 988, 1152
BspPI GGATC 3 cut(s) 131, 396, 1789
BspQI GCTCTTC 1 cut(s) 855
BspT104I TTCGAA 1 cut(s) 1283
BspT107I GGYRCC 2 cut(s) 560, 1000
BspTNI GGTCTC 1 cut(s) 1757
BsrDI GCAATG 4 cut(s) 110, 1032, 1596, 1619
BsrGI TGTACA 1 cut(s) 459
BsrI ACTGG 4 cut(s) 671, 824, 1465, 1537
BssECI CCNNGG 8 cut(s) 216, 337, 422, 564, 1181, 1392, 1512, 1767
BssMI GATC 4 cut(s) 136, 388, 1317, 1781
BssSI CACGAG 1 cut(s) 845
BssT1I CCWWGG 4 cut(s) 422, 564, 1181, 1512
Bst2BI CACGAG 1 cut(s) 845
Bst2UI CCWGG 2 cut(s) 1768, 1779
Bst4CI ACNGT 4 cut(s) 560, 969, 1471, 1708
Bst6I CTCTTC 4 cut(s) 570, 810, 855, 1662
BstAPI GCANNNNNTGC 1 cut(s) 592
BstAUI TGTACA 1 cut(s) 459
BstBI TTCGAA 1 cut(s) 1283
BstC8I GCNNGC 2 cut(s) 185, 293
BstDSI CCRYGG 3 cut(s) 564, 1181, 1512
BstENI CCTNNNNNAGG 2 cut(s) 941, 1148
BstKTI GATC 4 cut(s) 139, 391, 1320, 1784
BstMAI GTCTC 1 cut(s) 1757
BstMBI GATC 4 cut(s) 136, 388, 1317, 1781
BstMCI CGRYCG 1 cut(s) 1637
BstMWI GCNNNNNNNGC 4 cut(s) 592, 737, 1144, 1565
BstNI CCWGG 2 cut(s) 1768, 1779
BstNSI RCATGY 1 cut(s) 149
BstSCI CCNGG 3 cut(s) 1392, 1766, 1777
BstSFI CTRYAG 2 cut(s) 928, 1470
BstSLI GKGCMC 1 cut(s) 366
BstV1I GCAGC 4 cut(s) 715, 942, 945, 1552
BstV2I GAAGAC 1 cut(s) 1734
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BstZI CGGCCG 1 cut(s) 1634
BsuI GTATCC 1 cut(s) 1765
BsuRI GGCC 4 cut(s) 39, 162, 1020, 1636
BtgI CCRYGG 3 cut(s) 564, 1181, 1512
BtgZI GCGATG 1 cut(s) 1434
BtsI GCAGTG 2 cut(s) 69, 364
BtsIMutI CAGTG 4 cut(s) 69, 364, 1313, 1327
BveI ACCTGC 2 cut(s) 988, 1152
Cac8I GCNNGC 2 cut(s) 185, 293
CaiI CAGNNNCTG 1 cut(s) 611
Cfr13I GGNCC 3 cut(s) 37, 886, 1489
Csp6I GTAC 6 cut(s) 460, 655, 775, 1001, 1086, 1704
CviAII CATG 6 cut(s) 146, 565, 866, 1182, 1265, 1513
CviQI GTAC 6 cut(s) 460, 655, 775, 1001, 1086, 1704
DpnI GATC 4 cut(s) 138, 390, 1319, 1783
DpnII GATC 4 cut(s) 136, 388, 1317, 1781
EaeI YGGCCR 3 cut(s) 160, 1018, 1634
EagI CGGCCG 1 cut(s) 1634
Eam1104I CTCTTC 4 cut(s) 570, 810, 855, 1662
EarI CTCTTC 4 cut(s) 570, 810, 855, 1662
Ecl136II GAGCTC 1 cut(s) 844
EclXI CGGCCG 1 cut(s) 1634
Eco130I CCWWGG 4 cut(s) 422, 564, 1181, 1512
Eco24I GRGCYC 3 cut(s) 430, 620, 846
Eco31I GGTCTC 1 cut(s) 1757
Eco47I GGWCC 2 cut(s) 886, 1489
Eco52I CGGCCG 1 cut(s) 1634
Eco53kI GAGCTC 1 cut(s) 844
Eco57I CTGAAG 3 cut(s) 779, 1007, 1133
Eco88I CYCGRG 1 cut(s) 215
EcoICRI GAGCTC 1 cut(s) 844
EcoNI CCTNNNNNAGG 2 cut(s) 941, 1148
EcoO109I RGGNCCY 2 cut(s) 37, 886
EcoRII CCWGG 2 cut(s) 1766, 1777
EcoT14I CCWWGG 4 cut(s) 422, 564, 1181, 1512
EcoT38I GRGCYC 3 cut(s) 430, 620, 846
ErhI CCWWGG 4 cut(s) 422, 564, 1181, 1512
FaeI CATG 6 cut(s) 149, 568, 869, 1185, 1268, 1516
FaqI GGGAC 1 cut(s) 500
FatI CATG 6 cut(s) 145, 564, 865, 1181, 1264, 1512
FauI CCCGC 1 cut(s) 709
FbaI TGATCA 1 cut(s) 1317
Fnu4HI GCNGC 5 cut(s) 729, 931, 934, 1193, 1566
FriOI GRGCYC 3 cut(s) 430, 620, 846
Fsp4HI GCNGC 5 cut(s) 729, 931, 934, 1193, 1566
FspBI CTAG 4 cut(s) 377, 423, 483, 621
GluI GCNGC 5 cut(s) 729, 931, 934, 1193, 1566
GsuI CTGGAG 1 cut(s) 780
HaeIII GGCC 4 cut(s) 39, 162, 1020, 1636
HapII CCGG 1 cut(s) 1394
Hin1II CATG 6 cut(s) 149, 568, 869, 1185, 1268, 1516
HindIII AAGCTT 2 cut(s) 1100, 1277
HpaII CCGG 1 cut(s) 1394
HphI GGTGA 3 cut(s) 101, 783, 1547
Hpy166II GTNNAC 2 cut(s) 364, 1530
Hpy188III TCNNGA 6 cut(s) 298, 501, 770, 1151, 1295, 1448
Hpy8I GTNNAC 2 cut(s) 364, 1530
Hpy99I CGWCG 1 cut(s) 1097
HpyAV CCTTC 6 cut(s) 73, 714, 718, 1157, 1301, 1502
HpyCH4III ACNGT 4 cut(s) 560, 969, 1471, 1708
HpyF10VI GCNNNNNNNGC 4 cut(s) 592, 737, 1144, 1565
Hsp92II CATG 6 cut(s) 149, 568, 869, 1185, 1268, 1516
KpnI GGTACC 1 cut(s) 1004
Ksp22I TGATCA 1 cut(s) 1317
Kzo9I GATC 4 cut(s) 136, 388, 1317, 1781
LguI GCTCTTC 1 cut(s) 855
LmnI GCTCC 3 cut(s) 12, 300, 615
Lsp1109I GCAGC 4 cut(s) 715, 942, 945, 1552
LweI GCATC 5 cut(s) 265, 342, 595, 1060, 1266
MaeI CTAG 4 cut(s) 377, 423, 483, 621
MaeIII GTNAC 4 cut(s) 762, 1076, 1452, 1504
MalI GATC 4 cut(s) 138, 390, 1319, 1783
MboI GATC 4 cut(s) 136, 388, 1317, 1781
MfeI CAATTG 1 cut(s) 1081
MflI RGATCY 1 cut(s) 388
MhlI GDGCHC 4 cut(s) 366, 430, 620, 846
MlsI TGGCCA 2 cut(s) 162, 1020
MluCI AATT 9 cut(s) 101, 472, 733, 1081, 1212, 1332, 1650, 1684, 1786
MluNI TGGCCA 2 cut(s) 162, 1020
MlyI GAGTC 4 cut(s) 63, 101, 617, 1141
MmeI TCCRAC 2 cut(s) 492, 861
Mox20I TGGCCA 2 cut(s) 162, 1020
MroXI GAANNNNTTC 1 cut(s) 346
MscI TGGCCA 2 cut(s) 162, 1020
MseI TTAA 1 cut(s) 1518
MslI CAYNNNNRTG 1 cut(s) 261
Msp20I TGGCCA 2 cut(s) 162, 1020
MspI CCGG 1 cut(s) 1394
MspR9I CCNGG 3 cut(s) 1394, 1768, 1779
MunI CAATTG 1 cut(s) 1081
Mva1269I GAATGC 1 cut(s) 212
MvaI CCWGG 2 cut(s) 1768, 1779
MwoI GCNNNNNNNGC 4 cut(s) 592, 737, 1144, 1565
NciI CCSGG 1 cut(s) 1394
NcoI CCATGG 3 cut(s) 564, 1181, 1512
NdeII GATC 4 cut(s) 136, 388, 1317, 1781
NlaIII CATG 6 cut(s) 149, 568, 869, 1185, 1268, 1516
NlaIV GGNNCC 6 cut(s) 14, 562, 617, 1002, 1271, 1720
NmeAIII GCCGAG 1 cut(s) 1662
NmuCI GTSAC 1 cut(s) 762
NspI RCATGY 1 cut(s) 149
NspV TTCGAA 1 cut(s) 1283
PciI ACATGT 1 cut(s) 145
PciSI GCTCTTC 1 cut(s) 855
PctI GAATGC 1 cut(s) 212
PdmI GAANNNNTTC 1 cut(s) 346
PfeI GAWTC 8 cut(s) 107, 281, 301, 536, 754, 832, 1030, 1441
PflFI GACNNNGTC 1 cut(s) 607
PfoI TCCNGGA 1 cut(s) 1777
PkrI GCNGC 5 cut(s) 730, 932, 935, 1194, 1567
PleI GAGTC 4 cut(s) 62, 100, 616, 1140
PpsI GAGTC 4 cut(s) 62, 100, 616, 1140
PpuMI RGGWCCY 1 cut(s) 886
PscI ACATGT 1 cut(s) 145
PsiI TTATAA 1 cut(s) 1656
Psp124BI GAGCTC 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 2 cut(s) 1766, 1777
PspGI CCWGG 2 cut(s) 1766, 1777
PspN4I GGNNCC 6 cut(s) 14, 562, 617, 1002, 1271, 1720
PspPI GGNCC 3 cut(s) 37, 886, 1489
PspPPI RGGWCCY 1 cut(s) 886
PstI CTGCAG 1 cut(s) 932
PstNI CAGNNNCTG 1 cut(s) 611
PsuI RGATCY 1 cut(s) 388
PsyI GACNNNGTC 1 cut(s) 607
RsaI GTAC 6 cut(s) 461, 656, 776, 1002, 1087, 1705
RsaNI GTAC 6 cut(s) 460, 655, 775, 1001, 1086, 1704
RseI CAYNNNNRTG 1 cut(s) 261
SacI GAGCTC 1 cut(s) 846
SapI GCTCTTC 1 cut(s) 855
SaqAI TTAA 1 cut(s) 1518
SatI GCNGC 5 cut(s) 729, 931, 934, 1193, 1566
Sau3AI GATC 4 cut(s) 136, 388, 1317, 1781
Sau96I GGNCC 3 cut(s) 37, 886, 1489
ScaI AGTACT 1 cut(s) 776
SchI GAGTC 4 cut(s) 63, 101, 617, 1141
ScrFI CCNGG 3 cut(s) 1394, 1768, 1779
SduI GDGCHC 4 cut(s) 366, 430, 620, 846
SfaNI GCATC 5 cut(s) 265, 342, 595, 1060, 1266
SfcI CTRYAG 2 cut(s) 928, 1470
SfuI TTCGAA 1 cut(s) 1283
SinI GGWCC 2 cut(s) 886, 1489
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 4 cut(s) 32, 910, 1448, 1604
SmoI CTYRAG 4 cut(s) 32, 910, 1448, 1604
Sse9I AATT 9 cut(s) 101, 472, 733, 1081, 1212, 1332, 1650, 1684, 1786
SsiI CCGC 5 cut(s) 74, 331, 595, 716, 1192
SspI AATATT 1 cut(s) 157
SspMI CTAG 4 cut(s) 377, 423, 483, 621
SstI GAGCTC 1 cut(s) 846
StyD4I CCNGG 3 cut(s) 1392, 1766, 1777
StyI CCWWGG 4 cut(s) 422, 564, 1181, 1512
TaaI ACNGT 4 cut(s) 560, 969, 1471, 1708
TaqI TCGA 3 cut(s) 500, 808, 1283
TasI AATT 9 cut(s) 101, 472, 733, 1081, 1212, 1332, 1650, 1684, 1786
TatI WGTACW 3 cut(s) 459, 774, 1703
TauI GCSGC 1 cut(s) 1195
TfiI GAWTC 8 cut(s) 107, 281, 301, 536, 754, 832, 1030, 1441
Tru1I TTAA 1 cut(s) 1518
Tru9I TTAA 1 cut(s) 1518
TscAI CASTG 4 cut(s) 76, 371, 1320, 1327
TseFI GTSAC 1 cut(s) 762
TseI GCWGC 4 cut(s) 728, 930, 933, 1565
Tsp45I GTSAC 1 cut(s) 762
TspGWI ACGGA 1 cut(s) 1224
TspRI CASTG 4 cut(s) 76, 371, 1320, 1327
Tth111I GACNNNGTC 1 cut(s) 607
VneI GTGCAC 1 cut(s) 362
VpaK11BI GGWCC 2 cut(s) 886, 1489
XagI CCTNNNNNAGG 2 cut(s) 941, 1148
XapI RAATTY 3 cut(s) 101, 1332, 1650
XceI RCATGY 1 cut(s) 149
XmaJI CCTAGG 1 cut(s) 422
XmnI GAANNNNTTC 1 cut(s) 346
XspI CTAG 4 cut(s) 377, 423, 483, 621
ZrmI AGTACT 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.