Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003736

Physical Location & Seq

Genomic Coordinates Reverse (-)

37313475 .. 37318525

Gene Structure 5051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g44840.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGAGTGCAAAGGTTGATACATCTGCATCAGCAACTGGTGGCCAAAAGGTCTCCAAGTTTGCTGCTAAGGCTGGATTTGTTATACCGAAAAACAAGTTGTCGGGTTCACTGGTGCCCATCTCTCGGGGAGGTAAAAATGTTGGTGCTAGTGATTATGGTAGTGGAGAGAGTAAGAAACAGGTTCAGAGGAAAACGAAATGGGGTGCTGATCTGTCACAAGATGCTTCTGTTAGAAAGGGAAGAGCCTTAGCTTATCAGACTCGGGTGGATCAAATTACACAACAGCTGAAATCGGGAATGTCAGAGTTTGGTAACAATGAGAACATGCCATCAGCAACTCAGGATCCAGACCACAGATCCTTTACGTATCAAGTTGACAAGGAGGGTGCAGAACAATTGGAACTTGAAAAGCGGGAAGCCATAGGTGAGATACTAAAGCTGAATCCAAGTTACAAGGCTCCATCTGATTACAAACCTTTGTTGAAAGAGGCTACAGTTCCTGTTCCTGTCAAAGAATATCCTACATACAATATTCTTGGTCTGATATATGGGCCTGGAGGTGATAATCAGAAGCAATTAGAAAAGGAAACAGGAGCTAAGATTCAAGTCTACGGTACCAAAGCAGTGACAGGAGAAAAGGCTGAAATAAAACAGTATGCTGGGAGTGAAATCCAGGCTGAATATGAAAAGTTATATGTTCATGTATCAGCTGATACATTTGAGAAAGTAGATGCAGCTGTTGCTGTAATCGAACTGCTAGTCACCTCTGTATCTGGAAATATGTCGGCCATTATGGGTGATAATGCTCATGTTCCTAGTCAAGGCCAGGACACAACCACCTCAGATATGGTTCCTACTACTATCATAGACCAAGGACCGGTGCTACCAGCAACAGGACATACACAAACTCTACCAAATGGGCAGTTTCAGTATCCTGGTTCATTTTACTCTACAGGCCAACCTGGCAGTCCAATGAATCAACTTGGCTTCACACCAATGAATTCTCAAATGCCAATTCTAAACAATGCTGCCCATCCATCAACACCTCCTTTTAATTCAACAATGCCAGCTCTTCTTCCCCATATACAACACCTACCACCATCAGTTTTGCAGCATACATATATGCCTCAGACCAGTCCTGGTTCTCATGGCGCACCAAGAAACTTCTCTATGATGGCTTCCCAGCCTTCATCAGTTCAATCTAATGTTTCAGCTCCAGTTACATTCTTGGGAAACCAACCCCCACCAACAGGCCAAAGTAATCATCCCCTTGCAAGAATATCTGACTGGCAACAGGCACCTGCTGGAAGCTCTGGTGGATGGAGCATACCACCGACATCTGCAGGTTTCAGTAATAATATGCATATGGCACCTAATCCTCTAAATCATCTCAATGCAGCTCCAACTTTTACTTCTTTGCCGCAACCTCACCCTCCTACTTTACCAATACTGGCACTTGCTCAACCCCAACCATTTATAAGCCCTATGTCAGGCTCTGCTCCAGCTCCTTCTTCAGGCCTAGTTACATCTCTACCTCCTCCTCATCAATCAAGAGTCCCTACTTCGGTCTCGGGAAGTGTACAAAATTTCAATCCTATAAAACCACCAATACTGACAGCTCCAAGTCCTGGTGACTTCACTTTCCAGCCTCACCGACCGCAAAGTCCAGCCTTTCAAGCAGTTCCCCAACAAAGCAATCAGTTTTCAGTTCACAATGCTCACCCGGCTGGACCAATGGGGCGACCTCAGGTAATGTCTCTACAGTTGCCTGTGCGACATATGACTCCTCAACCTTGCAATCAGGTGTTACCAGGGCCACAGGTGGGTGACCAGATTAGTCAACCTTCAGCTCATATTTCTCCTATTCAGTTTGCCAGAAATTCAACAGTTCCTCCCAGACTGGAAATGTTTCCAGATGTCAATCCTGTTGCACCTAGAATGTCACTCTTGCCAATGAGACCAGGGAACTTCAATCAAGCTCACCAAATGCCCAATTTGCGCAGTCCTTTGCCTCCAATGCCAGGAAGTCGTAATCAGTTTCAGCAAAGTTATCCTGCTCAATTGGCTCCAAATCAACAGTTCATCAACAATCCATATGCATCTGGCAAGTTGTCTAATCCTGGAGGACACCAACTTTATGATCCATTCTCTCCCAATTCTGACTCAACAGCAAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 SF1-HH

Protein Analysis

727

Amino Acids

77.74

Weight (kDa)

9.19

Isoelectric Point (pI)

57.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	52 - 158	6.3e-07	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	172 - 254	6.6e-14	KHDC4/BBP-like, KH-domain type I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G32940
fragaria_vesca	FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840
malus_domestica	MD03G1008800.v1.1 MD03G1008900.v1.1 MD03G1009300.v1.1 MD03G1009900.v1.1 MD03G1010000.v1.1 MD03G1010200.v1.1
prunus_persica	Prupe.6G010100_v2.0.a1
pyrus_communis	pycom03g00890 pycom03g00910 pycom11g00730 pycom11g00740 pycom11g00780
rosa_chinensis	RchiOBHm_Chr5g0081541
rosa_laevigata	RLG00000036946
rosa_multiflora	Rmu_co8214750.1_g000001 Rmu_co8505191.1_g000001 Rmu_sc0028842.1_g000001 Rmu_sc0038011.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002010
rosa_rugosa	Rorug05G0477200
rosa_samantha	Rh5AG528500 Rh5BG553300 Rh5CG576100 Rh5DG563400
rosa_wichuraiana	Rw5G049170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1478
AarI	CACCTGC	1 cut(s)	1309
AasI	GACNNNNNNGTC	1 cut(s)	1662
Acc16I	TGCGCA	1 cut(s)	2000
Acc36I	ACCTGC	2 cut(s)	1309, 1334
Acc65I	GGTACC	1 cut(s)	614
AccB1I	GGYRCC	4 cut(s)	112, 614, 1297, 1369
AccB7I	CCANNNNNTGG	1 cut(s)	1628
AccI	GTMKAC	1 cut(s)	609
AciI	CCGC	3 cut(s)	412, 1421, 1658
AclWI	GGATC	5 cut(s)	276, 338, 351, 351, 2135
AcoI	YGGCCR	2 cut(s)	40, 786
AcsI	RAATTY	3 cut(s)	1000, 1585, 1879
AcuI	CTGAAG	2 cut(s)	1497, 1830
AfaI	GTAC	2 cut(s)	616, 1581
AgeI	ACCGGT	1 cut(s)	877
AgsI	TTSAA	9 cut(s)	407, 484, 605, 1059, 1199, 1591, 1676, 1884, 1972
AjuI	GAANNNNNNNTTGG	2 cut(s)	1396, 1428
Alw26I	GTCTC	4 cut(s)	55, 1573, 1761, 1951
AlwI	GGATC	5 cut(s)	276, 338, 351, 351, 2135
AlwNI	CAGNNNCTG	3 cut(s)	35, 500, 1496
Ama87I	CYCGRG	3 cut(s)	123, 261, 1570
AoxI	GGCC	8 cut(s)	40, 551, 786, 823, 955, 1252, 1516, 1814
ApeKI	GCWGC	5 cut(s)	62, 734, 1028, 1111, 1397
ApoI	RAATTY	3 cut(s)	1000, 1585, 1879
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AsiGI	ACCGGT	1 cut(s)	877
Asp700I	GAANNNNTTC	1 cut(s)	1908
Asp718I	GGTACC	1 cut(s)	614
AspLEI	GCGC	2 cut(s)	1154, 2001
AspS9I	GGNCC	4 cut(s)	551, 875, 1730, 1814
AsuC2I	CCSGG	1 cut(s)	1724
AvaI	CYCGRG	3 cut(s)	123, 261, 1570
AvaII	GGWCC	2 cut(s)	875, 1730
AxyI	CCTNAGG	1 cut(s)	1746
BaeGI	GKGCMC	1 cut(s)	117
BaeI	ACNNNNGTAYC	2 cut(s)	753, 786
BalI	TGGCCA	1 cut(s)	42
BamHI	GGATCC	1 cut(s)	343
BanI	GGYRCC	4 cut(s)	112, 614, 1297, 1369
BbvI	GCAGC	5 cut(s)	49, 746, 1015, 1123, 1409
BccI	CCATC	8 cut(s)	125, 337, 469, 1041, 1045, 1108, 1168, 1314
BciVI	GTATCC	1 cut(s)	942
BcnI	CCSGG	1 cut(s)	1724
BcoDI	GTCTC	4 cut(s)	55, 1573, 1761, 1951
BfaI	CTAG	5 cut(s)	147, 758, 816, 1520, 1935
BfmI	CTRYAG	4 cut(s)	492, 951, 1341, 1760
BfuAI	ACCTGC	2 cut(s)	1309, 1334
BfuI	GTATCC	1 cut(s)	942
BglI	GCCNNNNNGGC	1 cut(s)	963
BisI	GCNGC	6 cut(s)	63, 735, 1029, 1112, 1398, 1421
BlsI	GCNGC	6 cut(s)	64, 736, 1030, 1113, 1399, 1422
Bme18I	GGWCC	2 cut(s)	875, 1730
BmeT110I	CYCGRG	3 cut(s)	123, 261, 1570
BmgT120I	GGNCC	4 cut(s)	551, 875, 1730, 1814
BmiI	GGNNCC	8 cut(s)	114, 345, 459, 616, 852, 1299, 1371, 2067
BmsI	GCATC	4 cut(s)	35, 211, 721, 2108
BpmI	CTGGAG	4 cut(s)	576, 1200, 1485, 2142
Bpu10I	CCTNAGC	2 cut(s)	66, 247
BpuMI	CCSGG	1 cut(s)	1724
BsaAI	YACGTR	1 cut(s)	366
BsaBI	GATNNNNATC	1 cut(s)	1920
BsaI	GGTCTC	3 cut(s)	55, 1573, 1951
BsaJI	CCNNGG	3 cut(s)	871, 1811, 1961
BsaWI	WCCGGW	1 cut(s)	877
BsaXI	ACNNNNNCTCC	2 cut(s)	1876, 1906
Bse118I	RCCGGY	1 cut(s)	877
Bse1I	ACTGG	7 cut(s)	40, 114, 1134, 1217, 1292, 1455, 1905
Bse21I	CCTNAGG	1 cut(s)	1746
Bse8I	GATNNNNATC	1 cut(s)	1920
BseDI	CCNNGG	3 cut(s)	871, 1811, 1961
BseGI	GGATG	3 cut(s)	1033, 1264, 1325
BseJI	GATNNNNATC	1 cut(s)	1920
BseMII	CTCAG	4 cut(s)	353, 855, 1142, 1760
BseNI	ACTGG	7 cut(s)	40, 114, 1134, 1217, 1292, 1455, 1905
BseRI	GAGGAG	3 cut(s)	1527, 1530, 1776
BseSI	GKGCMC	1 cut(s)	117
BseXI	GCAGC	5 cut(s)	49, 746, 1015, 1123, 1409
BseYI	CCCAGC	2 cut(s)	659, 1182
BsgI	GTGCAG	1 cut(s)	408
Bsh1285I	CGRYCG	1 cut(s)	1658
BshFI	GGCC	8 cut(s)	42, 553, 788, 825, 957, 1254, 1518, 1816
BshNI	GGYRCC	4 cut(s)	112, 614, 1297, 1369
BshTI	ACCGGT	1 cut(s)	877
BsiEI	CGRYCG	1 cut(s)	1658
BsiHKCI	CYCGRG	3 cut(s)	123, 261, 1570
BsiSI	CCGG	2 cut(s)	878, 1724
BslFI	GGGAC	1 cut(s)	1541
BsmAI	GTCTC	4 cut(s)	55, 1573, 1761, 1951
BsmFI	GGGAC	1 cut(s)	1541
BsnI	GGCC	8 cut(s)	42, 553, 788, 825, 957, 1254, 1518, 1816
Bso31I	GGTCTC	3 cut(s)	55, 1573, 1951
BsoBI	CYCGRG	3 cut(s)	123, 261, 1570
Bsp1286I	GDGCHC	1 cut(s)	117
Bsp1407I	TGTACA	1 cut(s)	1579
Bsp143I	GATC	5 cut(s)	208, 268, 343, 356, 2140
BspACI	CCGC	3 cut(s)	412, 1421, 1658
BspANI	GGCC	8 cut(s)	42, 553, 788, 825, 957, 1254, 1518, 1816
BspCNI	CTCAG	4 cut(s)	352, 854, 1141, 1759
BspLI	GGNNCC	8 cut(s)	114, 345, 459, 616, 852, 1299, 1371, 2067
BspMAI	CTGCAG	1 cut(s)	1345
BspMI	ACCTGC	2 cut(s)	1309, 1334
BspPI	GGATC	5 cut(s)	276, 338, 351, 351, 2135
BspQI	GCTCTTC	2 cut(s)	235, 1077
BspT107I	GGYRCC	4 cut(s)	112, 614, 1297, 1369
BspTNI	GGTCTC	3 cut(s)	55, 1573, 1951
BsrFI	RCCGGY	1 cut(s)	877
BsrGI	TGTACA	1 cut(s)	1579
BsrI	ACTGG	7 cut(s)	40, 114, 1134, 1217, 1292, 1455, 1905
BssAI	RCCGGY	1 cut(s)	877
BssECI	CCNNGG	3 cut(s)	871, 1811, 1961
BssMI	GATC	5 cut(s)	208, 268, 343, 356, 2140
BssT1I	CCWWGG	1 cut(s)	871
Bst4CI	ACNGT	6 cut(s)	496, 614, 654, 1764, 1888, 2079
Bst6I	CTCTTC	2 cut(s)	235, 1077
BstAPI	GCANNNNNTGC	1 cut(s)	740
BstAUI	TGTACA	1 cut(s)	1579
BstBAI	YACGTR	1 cut(s)	366
BstC8I	GCNNGC	1 cut(s)	1068
BstDEI	CTNAG	7 cut(s)	66, 247, 339, 597, 841, 1128, 1746
BstEII	GGTNACC	1 cut(s)	1826
BstENI	CCTNNNNNAGG	3 cut(s)	819, 1488, 1512
BstF5I	GGATG	3 cut(s)	1033, 1264, 1325
BstHHI	GCGC	2 cut(s)	1154, 2001
BstKTI	GATC	5 cut(s)	211, 271, 346, 359, 2143
BstMAI	GTCTC	4 cut(s)	55, 1573, 1761, 1951
BstMBI	GATC	5 cut(s)	208, 268, 343, 356, 2140
BstMCI	CGRYCG	1 cut(s)	1658
BstMWI	GCNNNNNNNGC	8 cut(s)	68, 740, 963, 1676, 1724, 1996, 2017, 2063
BstNSI	RCATGY	1 cut(s)	328
BstPI	GGTNACC	1 cut(s)	1826
BstSFI	CTRYAG	4 cut(s)	492, 951, 1341, 1760
BstSLI	GKGCMC	1 cut(s)	117
BstSNI	TACGTA	1 cut(s)	366
BstV1I	GCAGC	5 cut(s)	49, 746, 1015, 1123, 1409
BstX2I	RGATCY	2 cut(s)	343, 356
BstYI	RGATCY	2 cut(s)	343, 356
Bsu36I	CCTNAGG	1 cut(s)	1746
BsuI	GTATCC	1 cut(s)	942
BsuRI	GGCC	8 cut(s)	42, 553, 788, 825, 957, 1254, 1518, 1816
BtsCI	GGATG	3 cut(s)	1033, 1264, 1325
BtsI	GCAGTG	1 cut(s)	630
BtsIMutI	CAGTG	2 cut(s)	107, 630
BveI	ACCTGC	2 cut(s)	1309, 1334
Cac8I	GCNNGC	1 cut(s)	1068
CaiI	CAGNNNCTG	3 cut(s)	35, 500, 1496
CfoI	GCGC	2 cut(s)	1154, 2001
Cfr10I	RCCGGY	1 cut(s)	877
Cfr13I	GGNCC	4 cut(s)	551, 875, 1730, 1814
Csp6I	GTAC	2 cut(s)	615, 1580
CspAI	ACCGGT	1 cut(s)	877
CviAII	CATG	4 cut(s)	325, 701, 809, 1148
CviQI	GTAC	2 cut(s)	615, 1580
DdeI	CTNAG	7 cut(s)	66, 247, 339, 597, 841, 1128, 1746
DpnI	GATC	5 cut(s)	210, 270, 345, 358, 2142
DpnII	GATC	5 cut(s)	208, 268, 343, 356, 2140
DrdI	GACNNNNNNGTC	1 cut(s)	1662
DseDI	GACNNNNNNGTC	1 cut(s)	1662
EaeI	YGGCCR	2 cut(s)	40, 786
Eam1104I	CTCTTC	2 cut(s)	235, 1077
EarI	CTCTTC	2 cut(s)	235, 1077
Eco105I	TACGTA	1 cut(s)	366
Eco130I	CCWWGG	1 cut(s)	871
Eco147I	AGGCCT	1 cut(s)	1518
Eco31I	GGTCTC	3 cut(s)	55, 1573, 1951
Eco47I	GGWCC	2 cut(s)	875, 1730
Eco57I	CTGAAG	2 cut(s)	1497, 1830
Eco81I	CCTNAGG	1 cut(s)	1746
Eco88I	CYCGRG	3 cut(s)	123, 261, 1570
Eco91I	GGTNACC	1 cut(s)	1826
EcoNI	CCTNNNNNAGG	3 cut(s)	819, 1488, 1512
EcoO65I	GGTNACC	1 cut(s)	1826
EcoRI	GAATTC	1 cut(s)	1000
EcoT14I	CCWWGG	1 cut(s)	871
EcoT22I	ATGCAT	2 cut(s)	1365, 2101
ErhI	CCWWGG	1 cut(s)	871
FaeI	CATG	4 cut(s)	328, 704, 812, 1151
FaqI	GGGAC	1 cut(s)	1541
FatI	CATG	4 cut(s)	324, 700, 808, 1147
FauI	CCCGC	1 cut(s)	405
FauNDI	CATATG	3 cut(s)	1365, 1779, 2095
FblI	GTMKAC	1 cut(s)	609
Fnu4HI	GCNGC	6 cut(s)	63, 735, 1029, 1112, 1398, 1421
FokI	GGATG	3 cut(s)	1020, 1251, 1332
Fsp4HI	GCNGC	6 cut(s)	63, 735, 1029, 1112, 1398, 1421
FspBI	CTAG	5 cut(s)	147, 758, 816, 1520, 1935
FspI	TGCGCA	1 cut(s)	2000
GlaI	GCGC	2 cut(s)	1153, 2000
GluI	GCNGC	6 cut(s)	63, 735, 1029, 1112, 1398, 1421
GsaI	CCCAGC	2 cut(s)	663, 1186
GsuI	CTGGAG	4 cut(s)	576, 1200, 1485, 2142
HaeIII	GGCC	8 cut(s)	42, 553, 788, 825, 957, 1254, 1518, 1816
HapII	CCGG	2 cut(s)	878, 1724
HhaI	GCGC	2 cut(s)	1154, 2001
Hin1II	CATG	4 cut(s)	328, 704, 812, 1151
Hin6I	GCGC	2 cut(s)	1152, 1999
HinP1I	GCGC	2 cut(s)	1152, 1999
HincII	GTYRAC	2 cut(s)	376, 1841
HindII	GTYRAC	2 cut(s)	376, 1841
HinfI	GANTC	7 cut(s)	259, 442, 601, 976, 1554, 1783, 2162
HpaII	CCGG	2 cut(s)	878, 1724
Hpy166II	GTNNAC	6 cut(s)	107, 376, 610, 1580, 1711, 1841
Hpy188III	TCNNGA	7 cut(s)	294, 341, 347, 774, 1551, 1572, 1913
Hpy8I	GTNNAC	6 cut(s)	107, 376, 610, 1580, 1711, 1841
HpyAV	CCTTC	3 cut(s)	1197, 1518, 1854
HpyCH4III	ACNGT	6 cut(s)	496, 614, 654, 1764, 1888, 2079
HpyCH4IV	ACGT	1 cut(s)	365
HpyF10VI	GCNNNNNNNGC	8 cut(s)	68, 740, 963, 1676, 1724, 1996, 2017, 2063
HpyF3I	CTNAG	7 cut(s)	66, 247, 339, 597, 841, 1128, 1746
HpySE526I	ACGT	1 cut(s)	365
Hsp92II	CATG	4 cut(s)	328, 704, 812, 1151
HspAI	GCGC	2 cut(s)	1152, 1999
KpnI	GGTACC	1 cut(s)	618
Kzo9I	GATC	5 cut(s)	208, 268, 343, 356, 2140
LguI	GCTCTTC	2 cut(s)	235, 1077
LmnI	GCTCC	9 cut(s)	463, 593, 1219, 1323, 1405, 1504, 1510, 1624, 2071
Lsp1109I	GCAGC	5 cut(s)	49, 746, 1015, 1123, 1409
LweI	GCATC	4 cut(s)	35, 211, 721, 2108
MaeI	CTAG	5 cut(s)	147, 758, 816, 1520, 1935
MaeII	ACGT	1 cut(s)	365
MalI	GATC	5 cut(s)	210, 270, 345, 358, 2142
MboI	GATC	5 cut(s)	208, 268, 343, 356, 2140
MboII	GAAGA	4 cut(s)	252, 1064, 1067, 1503
MfeI	CAATTG	2 cut(s)	395, 2060
MflI	RGATCY	2 cut(s)	343, 356
MhlI	GDGCHC	1 cut(s)	117
MlsI	TGGCCA	1 cut(s)	42
MluNI	TGGCCA	1 cut(s)	42
MlyI	GAGTC	4 cut(s)	253, 1563, 1777, 2156
MmeI	TCCRAC	1 cut(s)	1427
Mox20I	TGGCCA	1 cut(s)	42
Mph1103I	ATGCAT	2 cut(s)	1365, 2101
MroXI	GAANNNNTTC	1 cut(s)	1908
MscI	TGGCCA	1 cut(s)	42
MseI	TTAA	1 cut(s)	1053
MslI	CAYNNNNRTG	2 cut(s)	995, 1392
Msp20I	TGGCCA	1 cut(s)	42
MspA1I	CMGCKG	3 cut(s)	286, 710, 737
MspI	CCGG	2 cut(s)	878, 1724
MunI	CAATTG	2 cut(s)	395, 2060
MwoI	GCNNNNNNNGC	8 cut(s)	68, 740, 963, 1676, 1724, 1996, 2017, 2063
NciI	CCSGG	1 cut(s)	1724
NdeI	CATATG	3 cut(s)	1365, 1779, 2095
NdeII	GATC	5 cut(s)	208, 268, 343, 356, 2140
NlaIII	CATG	4 cut(s)	328, 704, 812, 1151
NlaIV	GGNNCC	8 cut(s)	114, 345, 459, 616, 852, 1299, 1371, 2067
NmuCI	GTSAC	6 cut(s)	213, 625, 760, 1631, 1826, 1941
NsbI	TGCGCA	1 cut(s)	2000
NsiI	ATGCAT	2 cut(s)	1365, 2101
NspI	RCATGY	1 cut(s)	328
PaqCI	CACCTGC	1 cut(s)	1309
PceI	AGGCCT	1 cut(s)	1518
PciSI	GCTCTTC	2 cut(s)	235, 1077
PdmI	GAANNNNTTC	1 cut(s)	1908
PfeI	GAWTC	3 cut(s)	442, 601, 976
PflMI	CCANNNNNTGG	1 cut(s)	1628
PfoI	TCCNGGA	1 cut(s)	2119
PinAI	ACCGGT	1 cut(s)	877
PkrI	GCNGC	6 cut(s)	64, 736, 1030, 1113, 1399, 1422
PleI	GAGTC	4 cut(s)	253, 1562, 1777, 2156
PpsI	GAGTC	4 cut(s)	253, 1562, 1777, 2156
Ppu21I	YACGTR	1 cut(s)	366
PsiI	TTATAA	1 cut(s)	1478
PspEI	GGTNACC	1 cut(s)	1826
PspFI	CCCAGC	2 cut(s)	659, 1182
PspN4I	GGNNCC	8 cut(s)	114, 345, 459, 616, 852, 1299, 1371, 2067
PspPI	GGNCC	4 cut(s)	551, 875, 1730, 1814
PstI	CTGCAG	1 cut(s)	1345
PstNI	CAGNNNCTG	3 cut(s)	35, 500, 1496
PsuI	RGATCY	2 cut(s)	343, 356
PvuII	CAGCTG	3 cut(s)	286, 710, 737
RsaI	GTAC	2 cut(s)	616, 1581
RsaNI	GTAC	2 cut(s)	615, 1580
RseI	CAYNNNNRTG	2 cut(s)	995, 1392
SapI	GCTCTTC	2 cut(s)	235, 1077
SaqAI	TTAA	1 cut(s)	1053
SatI	GCNGC	6 cut(s)	63, 735, 1029, 1112, 1398, 1421
Sau3AI	GATC	5 cut(s)	208, 268, 343, 356, 2140
Sau96I	GGNCC	4 cut(s)	551, 875, 1730, 1814
SchI	GAGTC	4 cut(s)	253, 1563, 1777, 2156
SduI	GDGCHC	1 cut(s)	117
SfaNI	GCATC	4 cut(s)	35, 211, 721, 2108
SfcI	CTRYAG	4 cut(s)	492, 951, 1341, 1760
SinI	GGWCC	2 cut(s)	875, 1730
SmiMI	CAYNNNNRTG	2 cut(s)	995, 1392
SnaBI	TACGTA	1 cut(s)	366
SseBI	AGGCCT	1 cut(s)	1518
SsiI	CCGC	3 cut(s)	412, 1421, 1658
SspI	AATATT	1 cut(s)	532
SspMI	CTAG	5 cut(s)	147, 758, 816, 1520, 1935
StuI	AGGCCT	1 cut(s)	1518
StyI	CCWWGG	1 cut(s)	871
TaaI	ACNGT	6 cut(s)	496, 614, 654, 1764, 1888, 2079
TaiI	ACGT	1 cut(s)	368
TaqI	TCGA	1 cut(s)	750
TaqII	GACCGA	1 cut(s)	1555
TatI	WGTACW	1 cut(s)	1579
TauI	GCSGC	1 cut(s)	1423
TfiI	GAWTC	3 cut(s)	442, 601, 976
Tru1I	TTAA	1 cut(s)	1053
Tru9I	TTAA	1 cut(s)	1053
TscAI	CASTG	2 cut(s)	114, 630
TseFI	GTSAC	6 cut(s)	213, 625, 760, 1631, 1826, 1941
TseI	GCWGC	5 cut(s)	62, 734, 1028, 1111, 1397
Tsp45I	GTSAC	6 cut(s)	213, 625, 760, 1631, 1826, 1941
TspDTI	ATGAA	7 cut(s)	689, 699, 930, 989, 1013, 1179, 2071
TspRI	CASTG	2 cut(s)	114, 630
Van91I	CCANNNNNTGG	1 cut(s)	1628
VpaK11BI	GGWCC	2 cut(s)	875, 1730
XagI	CCTNNNNNAGG	3 cut(s)	819, 1488, 1512
XapI	RAATTY	3 cut(s)	1000, 1585, 1879
XceI	RCATGY	1 cut(s)	328
XcmI	CCANNNNNNNNNTGG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	609
XmnI	GAANNNNTTC	1 cut(s)	1908
XspI	CTAG	5 cut(s)	147, 758, 816, 1520, 1935
Zsp2I	ATGCAT	2 cut(s)	1365, 2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.