K homology RNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G32940 |
| fragaria_vesca | FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 |
| malus_domestica | MD03G1008800.v1.1 MD03G1008900.v1.1 MD03G1009300.v1.1 MD03G1009900.v1.1 MD03G1010000.v1.1 MD03G1010200.v1.1 |
| prunus_persica | Prupe.6G010100_v2.0.a1 |
| pyrus_communis | pycom03g00890 pycom03g00910 pycom11g00730 pycom11g00740 pycom11g00780 |
| rosa_chinensis | RchiOBHm_Chr5g0081541 |
| rosa_laevigata | RLG00000036946 |
| rosa_multiflora | Rmu_co8214750.1_g000001 Rmu_co8505191.1_g000001 Rmu_sc0028842.1_g000001 Rmu_sc0038011.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00002010 |
| rosa_rugosa | Rorug05G0477200 |
| rosa_samantha | Rh5AG528500 Rh5BG553300 Rh5CG576100 Rh5DG563400 |
| rosa_wichuraiana | Rw5G049170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1839 |
| AarI | CACCTGC | 1 cut(s) | 2713 |
| Acc36I | ACCTGC | 4 cut(s) | 733, 1264, 2457, 2713 |
| Acc65I | GGTACC | 1 cut(s) | 3157 |
| AccB1I | GGYRCC | 3 cut(s) | 343, 2773, 3157 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3035, 3230 |
| AccI | GTMKAC | 1 cut(s) | 240 |
| AccII | CGCG | 1 cut(s) | 1013 |
| AccIII | TCCGGA | 1 cut(s) | 593 |
| AclI | AACGTT | 1 cut(s) | 408 |
| AclWI | GGATC | 5 cut(s) | 48, 1644, 1706, 1719, 3551 |
| AcoI | YGGCCR | 3 cut(s) | 207, 1408, 2154 |
| AcsI | RAATTY | 5 cut(s) | 1072, 2383, 2998, 3286, 3453 |
| AcuI | CTGAAG | 1 cut(s) | 3237 |
| AcyI | GRCGYC | 1 cut(s) | 344 |
| AdeI | CACNNNGTG | 2 cut(s) | 263, 2930 |
| AfaI | GTAC | 8 cut(s) | 275, 440, 554, 581, 2218, 2315, 2994, 3159 |
| AflIII | ACRYGT | 1 cut(s) | 181 |
| AgeI | ACCGGT | 1 cut(s) | 2260 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 65 |
| AhlI | ACTAGT | 1 cut(s) | 2125 |
| Alw21I | GWGCWC | 1 cut(s) | 763 |
| Alw26I | GTCTC | 8 cut(s) | 9, 539, 833, 1423, 1491, 1988, 2562, 3367 |
| AlwI | GGATC | 5 cut(s) | 48, 1644, 1706, 1719, 3551 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2909 |
| Ama87I | CYCGRG | 2 cut(s) | 830, 1629 |
| Aor13HI | TCCGGA | 1 cut(s) | 593 |
| ApeKI | GCWGC | 9 cut(s) | 476, 1079, 1208, 1244, 1430, 2102, 2411, 2518, 2801 |
| ApoI | RAATTY | 5 cut(s) | 1072, 2383, 2998, 3286, 3453 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2112, 2144, 2438, 2470 |
| AsiGI | ACCGGT | 1 cut(s) | 2260 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 932 |
| Asp718I | GGTACC | 1 cut(s) | 3157 |
| AspLEI | GCGC | 1 cut(s) | 346 |
| AsuC2I | CCSGG | 2 cut(s) | 1493, 2367 |
| AsuII | TTCGAA | 1 cut(s) | 250 |
| AvaI | CYCGRG | 2 cut(s) | 830, 1629 |
| AvaII | GGWCC | 8 cut(s) | 93, 466, 645, 1983, 2258, 2279, 2321, 3137 |
| BaeGI | GKGCMC | 1 cut(s) | 1485 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2121, 2154 |
| BalI | TGGCCA | 1 cut(s) | 1410 |
| BamHI | GGATCC | 1 cut(s) | 1711 |
| BanI | GGYRCC | 3 cut(s) | 343, 2773, 3157 |
| BanII | GRGCYC | 3 cut(s) | 763, 857, 2897 |
| BauI | CACGAG | 2 cut(s) | 1478, 3438 |
| Bbv12I | GWGCWC | 1 cut(s) | 763 |
| BbvCI | CCTCAGC | 3 cut(s) | 101, 2955, 3195 |
| BbvI | GCAGC | 9 cut(s) | 488, 1066, 1195, 1256, 1417, 2114, 2398, 2530, 2813 |
| BceAI | ACGGC | 3 cut(s) | 194, 2141, 2437 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 101, 135, 1373, 1407 |
| BciVI | GTATCC | 4 cut(s) | 260, 806, 1187, 1735 |
| BclI | TGATCA | 4 cut(s) | 166, 399, 1137, 1519 |
| BcnI | CCSGG | 2 cut(s) | 1493, 2367 |
| BcoDI | GTCTC | 8 cut(s) | 9, 539, 833, 1423, 1491, 1988, 2562, 3367 |
| BcuI | ACTAGT | 1 cut(s) | 2125 |
| BfaI | CTAG | 7 cut(s) | 65, 2126, 2199, 2973, 3282, 3317, 3351 |
| BfoI | RGCGCY | 1 cut(s) | 347 |
| BfuAI | ACCTGC | 4 cut(s) | 733, 1264, 2457, 2713 |
| BfuI | GTATCC | 4 cut(s) | 260, 806, 1187, 1735 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 215, 2346, 3433 |
| Bme18I | GGWCC | 8 cut(s) | 93, 466, 645, 1983, 2258, 2279, 2321, 3137 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 65 |
| BmeT110I | CYCGRG | 2 cut(s) | 830, 1629 |
| BmiI | GGNNCC | 9 cut(s) | 95, 345, 1713, 1827, 1984, 2235, 2775, 3159, 3483 |
| BmrI | ACTGGG | 2 cut(s) | 919, 3411 |
| BmsI | GCATC | 7 cut(s) | 694, 700, 977, 1403, 1579, 2089, 3524 |
| BmuI | ACTGGG | 2 cut(s) | 919, 3411 |
| BpmI | CTGGAG | 5 cut(s) | 1812, 1944, 2607, 2898, 3558 |
| Bpu10I | CCTNAGC | 3 cut(s) | 101, 2955, 3195 |
| Bpu14I | TTCGAA | 1 cut(s) | 250 |
| BpuEI | CTTGAG | 4 cut(s) | 736, 1117, 1569, 2175 |
| BpuMI | CCSGG | 2 cut(s) | 1493, 2367 |
| BsaAI | YACGTR | 1 cut(s) | 1723 |
| BsaHI | GRCGYC | 1 cut(s) | 344 |
| BsaI | GGTCTC | 1 cut(s) | 1423 |
| BsaJI | CCNNGG | 6 cut(s) | 199, 857, 1492, 2254, 2317, 3431 |
| BsaWI | WCCGGW | 3 cut(s) | 355, 593, 2260 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 536, 566, 2275, 2305 |
| Bse118I | RCCGGY | 1 cut(s) | 2260 |
| Bse1I | ACTGG | 9 cut(s) | 914, 969, 1408, 1776, 2541, 2624, 2696, 3274, 3417 |
| Bse3DI | GCAATG | 1 cut(s) | 744 |
| BseAI | TCCGGA | 1 cut(s) | 593 |
| BseDI | CCNNGG | 6 cut(s) | 199, 857, 1492, 2254, 2317, 3431 |
| BseGI | GGATG | 7 cut(s) | 81, 151, 1374, 2416, 2668, 2729, 2947 |
| BseMI | GCAATG | 1 cut(s) | 744 |
| BseMII | CTCAG | 8 cut(s) | 115, 462, 1053, 1721, 2238, 2549, 2969, 3209 |
| BseNI | ACTGG | 9 cut(s) | 914, 969, 1408, 1776, 2541, 2624, 2696, 3274, 3417 |
| BseRI | GAGGAG | 5 cut(s) | 89, 293, 1079, 1296, 3183 |
| BseSI | GKGCMC | 1 cut(s) | 1485 |
| BseX3I | CGGCCG | 2 cut(s) | 207, 2154 |
| BseXI | GCAGC | 9 cut(s) | 488, 1066, 1195, 1256, 1417, 2114, 2398, 2530, 2813 |
| BseYI | CCCAGC | 3 cut(s) | 2027, 2589, 3130 |
| BsgI | GTGCAG | 4 cut(s) | 105, 1292, 1776, 2324 |
| Bsh1236I | CGCG | 1 cut(s) | 1013 |
| Bsh1285I | CGRYCG | 3 cut(s) | 210, 2157, 3065 |
| BshNI | GGYRCC | 3 cut(s) | 343, 2773, 3157 |
| BshTI | ACCGGT | 1 cut(s) | 2260 |
| BsiEI | CGRYCG | 3 cut(s) | 210, 2157, 3065 |
| BsiHKAI | GWGCWC | 1 cut(s) | 763 |
| BsiHKCI | CYCGRG | 2 cut(s) | 830, 1629 |
| BsiSI | CCGG | 5 cut(s) | 356, 594, 1492, 2261, 2366 |
| BslFI | GGGAC | 4 cut(s) | 245, 313, 1996, 2954 |
| BsmAI | GTCTC | 8 cut(s) | 9, 539, 833, 1423, 1491, 1988, 2562, 3367 |
| BsmBI | CGTCTC | 1 cut(s) | 1988 |
| BsmFI | GGGAC | 4 cut(s) | 245, 313, 1996, 2954 |
| BsmI | GAATGC | 2 cut(s) | 607, 660 |
| Bso31I | GGTCTC | 1 cut(s) | 1423 |
| BsoBI | CYCGRG | 2 cut(s) | 830, 1629 |
| Bsp119I | TTCGAA | 1 cut(s) | 250 |
| Bsp1286I | GDGCHC | 4 cut(s) | 763, 857, 1485, 2897 |
| Bsp13I | TCCGGA | 1 cut(s) | 593 |
| Bsp1407I | TGTACA | 1 cut(s) | 438 |
| Bsp143I | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| BspCNI | CTCAG | 8 cut(s) | 114, 461, 1054, 1720, 2237, 2548, 2968, 3208 |
| BspEI | TCCGGA | 1 cut(s) | 593 |
| BspFNI | CGCG | 1 cut(s) | 1013 |
| BspLI | GGNNCC | 9 cut(s) | 95, 345, 1713, 1827, 1984, 2235, 2775, 3159, 3483 |
| BspMI | ACCTGC | 4 cut(s) | 733, 1264, 2457, 2713 |
| BspPI | GGATC | 5 cut(s) | 48, 1644, 1706, 1719, 3551 |
| BspQI | GCTCTTC | 1 cut(s) | 1603 |
| BspT104I | TTCGAA | 1 cut(s) | 250 |
| BspT107I | GGYRCC | 3 cut(s) | 343, 2773, 3157 |
| BspTNI | GGTCTC | 1 cut(s) | 1423 |
| BsrDI | GCAATG | 1 cut(s) | 744 |
| BsrFI | RCCGGY | 1 cut(s) | 2260 |
| BsrGI | TGTACA | 1 cut(s) | 438 |
| BsrI | ACTGG | 9 cut(s) | 914, 969, 1408, 1776, 2541, 2624, 2696, 3274, 3417 |
| BssAI | RCCGGY | 1 cut(s) | 2260 |
| BssECI | CCNNGG | 6 cut(s) | 199, 857, 1492, 2254, 2317, 3431 |
| BssMI | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| BssNI | GRCGYC | 1 cut(s) | 344 |
| BssSI | CACGAG | 2 cut(s) | 1478, 3438 |
| BssT1I | CCWWGG | 2 cut(s) | 2254, 3431 |
| Bst2BI | CACGAG | 2 cut(s) | 1478, 3438 |
| Bst6I | CTCTTC | 1 cut(s) | 1603 |
| BstACI | GRCGYC | 1 cut(s) | 344 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1865, 2108 |
| BstAUI | TGTACA | 1 cut(s) | 438 |
| BstBAI | YACGTR | 1 cut(s) | 1723 |
| BstBI | TTCGAA | 1 cut(s) | 250 |
| BstC8I | GCNNGC | 4 cut(s) | 220, 624, 726, 2865 |
| BstEII | GGTNACC | 1 cut(s) | 3233 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2202, 2901, 3198 |
| BstF5I | GGATG | 7 cut(s) | 81, 151, 1374, 2416, 2668, 2729, 2947 |
| BstFNI | CGCG | 1 cut(s) | 1013 |
| BstH2I | RGCGCY | 1 cut(s) | 347 |
| BstHHI | GCGC | 1 cut(s) | 346 |
| BstKTI | GATC | 9 cut(s) | 56, 169, 402, 1140, 1522, 1579, 1639, 1714, 3559 |
| BstMAI | GTCTC | 8 cut(s) | 9, 539, 833, 1423, 1491, 1988, 2562, 3367 |
| BstMBI | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| BstMCI | CGRYCG | 3 cut(s) | 210, 2157, 3065 |
| BstNSI | RCATGY | 3 cut(s) | 185, 1271, 2303 |
| BstPI | GGTNACC | 1 cut(s) | 3233 |
| BstSLI | GKGCMC | 1 cut(s) | 1485 |
| BstUI | CGCG | 1 cut(s) | 1013 |
| BstV1I | GCAGC | 9 cut(s) | 488, 1066, 1195, 1256, 1417, 2114, 2398, 2530, 2813 |
| BstX2I | RGATCY | 1 cut(s) | 1711 |
| BstYI | RGATCY | 1 cut(s) | 1711 |
| BstZI | CGGCCG | 2 cut(s) | 207, 2154 |
| BsuI | GTATCC | 4 cut(s) | 260, 806, 1187, 1735 |
| BtgZI | GCGATG | 1 cut(s) | 954 |
| BtsCI | GGATG | 7 cut(s) | 81, 151, 1374, 2416, 2668, 2729, 2947 |
| BtsIMutI | CAGTG | 3 cut(s) | 241, 1522, 3017 |
| BveI | ACCTGC | 4 cut(s) | 733, 1264, 2457, 2713 |
| Cac8I | GCNNGC | 4 cut(s) | 220, 624, 726, 2865 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2909 |
| CfoI | GCGC | 1 cut(s) | 346 |
| Cfr10I | RCCGGY | 1 cut(s) | 2260 |
| CsiI | ACCWGGT | 1 cut(s) | 2926 |
| Csp6I | GTAC | 8 cut(s) | 274, 439, 553, 580, 2217, 2314, 2993, 3158 |
| CspAI | ACCGGT | 1 cut(s) | 2260 |
| CviAII | CATG | 9 cut(s) | 182, 470, 1052, 1264, 1268, 1523, 2069, 2300, 2770 |
| CviQI | GTAC | 8 cut(s) | 274, 439, 553, 580, 2217, 2314, 2993, 3158 |
| DinI | GGCGCC | 1 cut(s) | 345 |
| DpnI | GATC | 9 cut(s) | 55, 168, 401, 1139, 1521, 1578, 1638, 1713, 3558 |
| DpnII | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| DraIII | CACNNNGTG | 2 cut(s) | 263, 2930 |
| DriI | GACNNNNNGTC | 1 cut(s) | 65 |
| EaeI | YGGCCR | 3 cut(s) | 207, 1408, 2154 |
| EagI | CGGCCG | 2 cut(s) | 207, 2154 |
| Eam1104I | CTCTTC | 1 cut(s) | 1603 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 65 |
| EarI | CTCTTC | 1 cut(s) | 1603 |
| EciI | GGCGGA | 1 cut(s) | 106 |
| Ecl136II | GAGCTC | 1 cut(s) | 761 |
| EclXI | CGGCCG | 2 cut(s) | 207, 2154 |
| Eco130I | CCWWGG | 2 cut(s) | 2254, 3431 |
| Eco147I | AGGCCT | 1 cut(s) | 2395 |
| Eco24I | GRGCYC | 3 cut(s) | 763, 857, 2897 |
| Eco31I | GGTCTC | 1 cut(s) | 1423 |
| Eco47I | GGWCC | 8 cut(s) | 93, 466, 645, 1983, 2258, 2279, 2321, 3137 |
| Eco52I | CGGCCG | 2 cut(s) | 207, 2154 |
| Eco53kI | GAGCTC | 1 cut(s) | 761 |
| Eco57I | CTGAAG | 1 cut(s) | 3237 |
| Eco88I | CYCGRG | 2 cut(s) | 830, 1629 |
| Eco91I | GGTNACC | 1 cut(s) | 3233 |
| EcoICRI | GAGCTC | 1 cut(s) | 761 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2202, 2901, 3198 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2279 |
| EcoO65I | GGTNACC | 1 cut(s) | 3233 |
| EcoRI | GAATTC | 1 cut(s) | 2383 |
| EcoT14I | CCWWGG | 2 cut(s) | 2254, 3431 |
| EcoT22I | ATGCAT | 2 cut(s) | 693, 1269 |
| EcoT38I | GRGCYC | 3 cut(s) | 763, 857, 2897 |
| EgeI | GGCGCC | 1 cut(s) | 345 |
| EheI | GGCGCC | 1 cut(s) | 345 |
| ErhI | CCWWGG | 2 cut(s) | 2254, 3431 |
| Esp3I | CGTCTC | 1 cut(s) | 1988 |
| FaeI | CATG | 9 cut(s) | 185, 473, 1055, 1267, 1271, 1526, 2072, 2303, 2773 |
| FaqI | GGGAC | 4 cut(s) | 245, 313, 1996, 2954 |
| FatI | CATG | 9 cut(s) | 181, 469, 1051, 1263, 1267, 1522, 2068, 2299, 2769 |
| FauI | CCCGC | 3 cut(s) | 338, 1773, 2740 |
| FauNDI | CATATG | 1 cut(s) | 3186 |
| FbaI | TGATCA | 4 cut(s) | 166, 399, 1137, 1519 |
| FblI | GTMKAC | 1 cut(s) | 240 |
| FokI | GGATG | 7 cut(s) | 68, 138, 1381, 2403, 2655, 2736, 2934 |
| FriOI | GRGCYC | 3 cut(s) | 763, 857, 2897 |
| FspBI | CTAG | 7 cut(s) | 65, 2126, 2199, 2973, 3282, 3317, 3351 |
| GlaI | GCGC | 1 cut(s) | 345 |
| GsaI | CCCAGC | 3 cut(s) | 2031, 2593, 3134 |
| GsuI | CTGGAG | 5 cut(s) | 1812, 1944, 2607, 2898, 3558 |
| HaeII | RGCGCY | 1 cut(s) | 347 |
| HapII | CCGG | 5 cut(s) | 356, 594, 1492, 2261, 2366 |
| HhaI | GCGC | 1 cut(s) | 346 |
| Hin1I | GRCGYC | 1 cut(s) | 344 |
| Hin1II | CATG | 9 cut(s) | 185, 473, 1055, 1267, 1271, 1526, 2072, 2303, 2773 |
| Hin6I | GCGC | 1 cut(s) | 344 |
| HinP1I | GCGC | 1 cut(s) | 344 |
| HincII | GTYRAC | 2 cut(s) | 1744, 3248 |
| HindII | GTYRAC | 2 cut(s) | 1744, 3248 |
| HpaII | CCGG | 5 cut(s) | 356, 594, 1492, 2261, 2366 |
| Hpy166II | GTNNAC | 7 cut(s) | 241, 1092, 1475, 1744, 2251, 3118, 3248 |
| Hpy8I | GTNNAC | 7 cut(s) | 241, 1092, 1475, 1744, 2251, 3118, 3248 |
| Hpy99I | CGWCG | 1 cut(s) | 215 |
| HpyAV | CCTTC | 7 cut(s) | 457, 1999, 2604, 2852, 2856, 2931, 3261 |
| HpyCH4IV | ACGT | 6 cut(s) | 159, 246, 408, 1692, 1722, 3356 |
| HpySE526I | ACGT | 6 cut(s) | 159, 246, 408, 1692, 1722, 3356 |
| Hsp92I | GRCGYC | 1 cut(s) | 344 |
| Hsp92II | CATG | 9 cut(s) | 185, 473, 1055, 1267, 1271, 1526, 2072, 2303, 2773 |
| HspAI | GCGC | 1 cut(s) | 344 |
| KasI | GGCGCC | 1 cut(s) | 343 |
| Kpn2I | TCCGGA | 1 cut(s) | 593 |
| KpnI | GGTACC | 1 cut(s) | 3161 |
| Ksp22I | TGATCA | 4 cut(s) | 166, 399, 1137, 1519 |
| Kzo9I | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| LguI | GCTCTTC | 1 cut(s) | 1603 |
| LmnI | GCTCC | 9 cut(s) | 758, 1060, 1831, 1961, 2626, 2727, 2809, 2917, 2923 |
| Lsp1109I | GCAGC | 9 cut(s) | 488, 1066, 1195, 1256, 1417, 2114, 2398, 2530, 2813 |
| LweI | GCATC | 7 cut(s) | 694, 700, 977, 1403, 1579, 2089, 3524 |
| MabI | ACCWGGT | 1 cut(s) | 2926 |
| MaeI | CTAG | 7 cut(s) | 65, 2126, 2199, 2973, 3282, 3317, 3351 |
| MaeII | ACGT | 6 cut(s) | 159, 246, 408, 1692, 1722, 3356 |
| MaeIII | GTNAC | 6 cut(s) | 1100, 2128, 2626, 2935, 3233, 3357 |
| MalI | GATC | 9 cut(s) | 55, 168, 401, 1139, 1521, 1578, 1638, 1713, 3558 |
| MboI | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| MboII | GAAGA | 5 cut(s) | 286, 1027, 1178, 1480, 1620 |
| MfeI | CAATTG | 3 cut(s) | 999, 1763, 3476 |
| MflI | RGATCY | 1 cut(s) | 1711 |
| MhlI | GDGCHC | 4 cut(s) | 763, 857, 1485, 2897 |
| MlsI | TGGCCA | 1 cut(s) | 1410 |
| MluNI | TGGCCA | 1 cut(s) | 1410 |
| Mly113I | GGCGCC | 1 cut(s) | 344 |
| MmeI | TCCRAC | 4 cut(s) | 32, 1489, 2261, 2831 |
| Mox20I | TGGCCA | 1 cut(s) | 1410 |
| Mph1103I | ATGCAT | 2 cut(s) | 693, 1269 |
| MroI | TCCGGA | 1 cut(s) | 593 |
| MroXI | GAANNNNTTC | 1 cut(s) | 932 |
| MscI | TGGCCA | 1 cut(s) | 1410 |
| MseI | TTAA | 3 cut(s) | 660, 942, 3387 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1268, 1527, 2378, 2796, 3264 |
| Msp20I | TGGCCA | 1 cut(s) | 1410 |
| MspA1I | CMGCKG | 6 cut(s) | 1654, 1832, 2078, 2105, 2510, 3134 |
| MspI | CCGG | 5 cut(s) | 356, 594, 1492, 2261, 2366 |
| MunI | CAATTG | 3 cut(s) | 999, 1763, 3476 |
| Mva1269I | GAATGC | 2 cut(s) | 607, 660 |
| MvnI | CGCG | 1 cut(s) | 1013 |
| NarI | GGCGCC | 1 cut(s) | 344 |
| NciI | CCSGG | 2 cut(s) | 1493, 2367 |
| NdeI | CATATG | 1 cut(s) | 3186 |
| NdeII | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| NlaIII | CATG | 9 cut(s) | 185, 473, 1055, 1267, 1271, 1526, 2072, 2303, 2773 |
| NlaIV | GGNNCC | 9 cut(s) | 95, 345, 1713, 1827, 1984, 2235, 2775, 3159, 3483 |
| NmeAIII | GCCGAG | 2 cut(s) | 180, 185 |
| NmuCI | GTSAC | 4 cut(s) | 1100, 2128, 3233, 3357 |
| NsiI | ATGCAT | 2 cut(s) | 693, 1269 |
| NspI | RCATGY | 3 cut(s) | 185, 1271, 2303 |
| NspV | TTCGAA | 1 cut(s) | 250 |
| PaqCI | CACCTGC | 1 cut(s) | 2713 |
| PceI | AGGCCT | 1 cut(s) | 2395 |
| PciI | ACATGT | 1 cut(s) | 181 |
| PciSI | GCTCTTC | 1 cut(s) | 1603 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 207 |
| PctI | GAATGC | 2 cut(s) | 607, 660 |
| PdmI | GAANNNNTTC | 1 cut(s) | 932 |
| PfeI | GAWTC | 8 cut(s) | 26, 252, 352, 1169, 1810, 1969, 2359, 2678 |
| PflFI | GACNNNGTC | 1 cut(s) | 236 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3035, 3230 |
| PinAI | ACCGGT | 1 cut(s) | 2260 |
| PluTI | GGCGCC | 1 cut(s) | 347 |
| Ppu21I | YACGTR | 1 cut(s) | 1723 |
| PpuMI | RGGWCCY | 1 cut(s) | 2279 |
| PscI | ACATGT | 1 cut(s) | 181 |
| PsiI | TTATAA | 1 cut(s) | 1839 |
| Psp124BI | GAGCTC | 1 cut(s) | 763 |
| Psp1406I | AACGTT | 1 cut(s) | 408 |
| Psp5II | RGGWCCY | 1 cut(s) | 2279 |
| PspEI | GGTNACC | 1 cut(s) | 3233 |
| PspFI | CCCAGC | 3 cut(s) | 2027, 2589, 3130 |
| PspN4I | GGNNCC | 9 cut(s) | 95, 345, 1713, 1827, 1984, 2235, 2775, 3159, 3483 |
| PspPPI | RGGWCCY | 1 cut(s) | 2279 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 266, 298 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2909 |
| PsuI | RGATCY | 1 cut(s) | 1711 |
| PsyI | GACNNNGTC | 1 cut(s) | 236 |
| PvuII | CAGCTG | 5 cut(s) | 1654, 1832, 2078, 2105, 3134 |
| RsaI | GTAC | 8 cut(s) | 275, 440, 554, 581, 2218, 2315, 2994, 3159 |
| RsaNI | GTAC | 8 cut(s) | 274, 439, 553, 580, 2217, 2314, 2993, 3158 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1268, 1527, 2378, 2796, 3264 |
| SacI | GAGCTC | 1 cut(s) | 763 |
| SapI | GCTCTTC | 1 cut(s) | 1603 |
| SaqAI | TTAA | 3 cut(s) | 660, 942, 3387 |
| Sau3AI | GATC | 9 cut(s) | 53, 166, 399, 1137, 1519, 1576, 1636, 1711, 3556 |
| SduI | GDGCHC | 4 cut(s) | 763, 857, 1485, 2897 |
| SexAI | ACCWGGT | 1 cut(s) | 2926 |
| SfaNI | GCATC | 7 cut(s) | 694, 700, 977, 1403, 1579, 2089, 3524 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 215 |
| SfoI | GGCGCC | 1 cut(s) | 345 |
| SfuI | TTCGAA | 1 cut(s) | 250 |
| SinI | GGWCC | 8 cut(s) | 93, 466, 645, 1983, 2258, 2279, 2321, 3137 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1268, 1527, 2378, 2796, 3264 |
| SmlI | CTYRAG | 4 cut(s) | 715, 1096, 1584, 2190 |
| SmoI | CTYRAG | 4 cut(s) | 715, 1096, 1584, 2190 |
| SpeI | ACTAGT | 1 cut(s) | 2125 |
| SseBI | AGGCCT | 1 cut(s) | 2395 |
| SspDI | GGCGCC | 1 cut(s) | 343 |
| SspI | AATATT | 1 cut(s) | 1900 |
| SspMI | CTAG | 7 cut(s) | 65, 2126, 2199, 2973, 3282, 3317, 3351 |
| SstI | GAGCTC | 1 cut(s) | 763 |
| StuI | AGGCCT | 1 cut(s) | 2395 |
| StyI | CCWWGG | 2 cut(s) | 2254, 3431 |
| TaiI | ACGT | 6 cut(s) | 162, 249, 411, 1695, 1725, 3359 |
| TaqI | TCGA | 5 cut(s) | 213, 250, 1383, 2118, 2644 |
| TatI | WGTACW | 1 cut(s) | 438 |
| TauI | GCSGC | 1 cut(s) | 428 |
| TfiI | GAWTC | 8 cut(s) | 26, 252, 352, 1169, 1810, 1969, 2359, 2678 |
| Tru1I | TTAA | 3 cut(s) | 660, 942, 3387 |
| Tru9I | TTAA | 3 cut(s) | 660, 942, 3387 |
| TscAI | CASTG | 3 cut(s) | 241, 1522, 3024 |
| TseFI | GTSAC | 4 cut(s) | 1100, 2128, 3233, 3357 |
| TseI | GCWGC | 9 cut(s) | 476, 1079, 1208, 1244, 1430, 2102, 2411, 2518, 2801 |
| Tsp45I | GTSAC | 4 cut(s) | 1100, 2128, 3233, 3357 |
| TspGWI | ACGGA | 2 cut(s) | 755, 825 |
| TspRI | CASTG | 3 cut(s) | 241, 1522, 3024 |
| Tth111I | GACNNNGTC | 1 cut(s) | 236 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3035, 3230 |
| VpaK11BI | GGWCC | 8 cut(s) | 93, 466, 645, 1983, 2258, 2279, 2321, 3137 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2202, 2901, 3198 |
| XapI | RAATTY | 5 cut(s) | 1072, 2383, 2998, 3286, 3453 |
| XceI | RCATGY | 3 cut(s) | 185, 1271, 2303 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2170, 2227 |
| XmiI | GTMKAC | 1 cut(s) | 240 |
| XmnI | GAANNNNTTC | 1 cut(s) | 932 |
| XspI | CTAG | 7 cut(s) | 65, 2126, 2199, 2973, 3282, 3317, 3351 |
| Zsp2I | ATGCAT | 2 cut(s) | 693, 1269 |