Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0003736

Physical Location & Seq

Genomic Coordinates Forward (+)

705386 .. 709478

Gene Structure 4093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g00890.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGTCTGGTACAACGATGACACCTGCATCATCAGCTGGTACACAAAAGGTCTCCATGTTTGCTGCCAAGGCTGGATTTGTTATACCAAAAAACAAGCTGTCGGGTTCACTTGTGCCTGTCTTTCGCGGAAGTAAAAACCTAGGAGCCGGTGATGCAGTTAGTGGAGAAAGTAAGAAACAGATTCAGAGGAAAACTAAATGGGGCCCTGATCTCACCCAGGATGCTTCTGTCAAAAAGGGAAGAGCTTTAGCTTATCAGACTCGGGTGGATCGAATCGCACAACAGCTGAACTCTGGAATGTTAGAGGATGAGAATGATGAGGACTTACTATCAGCACCTCAAGATCCGCACCACAAATCCTCTAAGCATCAAATTGACACAAACGACGTCAACCGGTTGGAACTTGAAAAGCGGGAAGCCATAGGTGAGATATTAAAGTTAAATCCAAGCTACAAGACCCCACCTGAGTATAAACCTTTGTTGAAAGAGGCTACAGTCCCTATTCCTGTGAAAGAATATCCTAAATACAATTTTGTTGGCCTAATATATGGTCCTGGAAGTGATAACCAGAAACAATTAGAAAAGGTAAGAGAAACCGGAGCCAAGATTCAAGTCTATGGTACCAAAGCAGGGACAGGACAGAAGGCTGAAATAAAACCATCTGATGGGAGTGAAATCCATGGTGAATATGAAAACTTATATGTTCATATATCAGCTGACACATTTGAGAAAGTAGATGCAGCGGTTGCTGTAATTGAACTGTTAGTCACCTCTGTATCAGGAAATCTGGCAGCGGTTAGCAGTACAGGTGCTTCAGTTTCTGCTGATAATGCTCATGTTCCTAGTCAAGTCCAGGACACTACAACCTCTAATATGGTTCCGACTACTGTGGTAAATCAGGGAATGGTACAACCACTGCCAGGACTTGCACAAACTCCACTGGATGGGCAGTTTCAGTACCCTGGTCCATTTTTCCCAAGGGGCCCATCTTCTGCTCCCATGAGTATGCCTGGCTTCACTCCACTGAATTCTTCGAGACCAGTTCTCAATAATCCTTCCCATCTTTCAACTTCACCTTTCAACCCTGGATACCTGCCTTCATCATTGGGTCTTCCGCCATCTCTTGTTTCCCCTAGACAAAATCCACCAACACCACATTTTTTGCCGCATGCATATATGGCTCCCCAGCCTGCATCAGTTCAAACTAATGTTTCAGCTCCACTCATATTCATAGGAAACCGACCACTGCCTGCTGGGAGCTCTACTGGATGGTCAAGCAGTCCACCAGCTCCACAACCAGGTGTTGCGTCCATGCCACCACCTTCAAATATATCAATGGCGAATATGGTGTCTTCTCTAAACCATCCTATTGCAGCAATTTCTTTTCCACGGCCTCAAGCGGGACTTCCTTCTACATCGCTATCCACATCTCTGCAAGCAAGAATTCCAAGTTCTGTTTCTGGAAGTGTTCCAAATTTCGCTCCCCTAAAACCACCAATGATGACGGCTCAAAGCCCTGGTGATTTCACTTTTCAGCCTCATCGACCACAGAATCCATCCTTCCAAACAGTTCCCCAGCCAAGCAGTCACTTTTCAGCACACAACGCTTCTCTTGCCAGACCAATGTTGCCATCTCCAGCACCTCAAGCACCGTCTTTCCAGTTTCCTCAGCCAGGCAGTCAGGTGTTATCGAGACCACAACTCAGTGACCACATGGGTCAGCATCCATCAGCTCATATTTCTGCTGCTCCCTATGCCAGAAATTCAACTGCCATCTCAGTTCCTCCCAGACTCGCAACATTTCTAGAATCCAGTACCGTTCTACCTCGGACGCCACACCCACCAATGAGACCGAGTAACTTCAATCCACCCCACCAGATGCCCAATTTGCCAGGTCCTCTGCCTCCGAGGCCAGGAAATTATATTCAAATTCAGCAAAACTATCCTGCTCACGCAACTCGACCTGAGATCCCACGTGCTCCAAATCAACAGTTCAGCAGCAACCTTGCATTTACCTCTGGCAAGTCGGCGTCCGGTCCTGGAGGAGGGCAACAACTGTATGATCCATTCTCACCCACTTCTGCGAATCAACAGCAGGGAGGTAATCCAGGAAAGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 SF1-HH

Protein Analysis

707

Amino Acids

75.0

Weight (kDa)

9.54

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G32940
fragaria_vesca	FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840
malus_domestica	MD03G1008800.v1.1 MD03G1008900.v1.1 MD03G1009300.v1.1 MD03G1009900.v1.1 MD03G1010000.v1.1 MD03G1010200.v1.1
prunus_persica	Prupe.6G010100_v2.0.a1
pyrus_communis	pycom03g00890 pycom03g00910 pycom11g00730 pycom11g00740 pycom11g00780
rosa_chinensis	RchiOBHm_Chr5g0081541
rosa_laevigata	RLG00000036946
rosa_multiflora	Rmu_co8214750.1_g000001 Rmu_co8505191.1_g000001 Rmu_sc0028842.1_g000001 Rmu_sc0038011.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002010
rosa_rugosa	Rorug05G0477200
rosa_samantha	Rh5AG528500 Rh5BG553300 Rh5CG576100 Rh5DG563400
rosa_wichuraiana	Rw5G049170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	31
AatII	GACGTC	1 cut(s)	390
Acc36I	ACCTGC	2 cut(s)	31, 1101
Acc65I	GGTACC	1 cut(s)	620
AccB1I	GGYRCC	1 cut(s)	620
AccB7I	CCANNNNNTGG	2 cut(s)	665, 944
AccII	CGCG	1 cut(s)	126
AciI	CCGC	8 cut(s)	126, 347, 412, 743, 794, 1115, 1166, 1400
AclWI	GGATC	4 cut(s)	276, 338, 1963, 2057
AcsI	RAATTY	5 cut(s)	1027, 1443, 1474, 1762, 1929
AcuI	CTGAAG	1 cut(s)	798
AcvI	CACGTG	1 cut(s)	1976
AcyI	GRCGYC	3 cut(s)	387, 1832, 2030
AfaI	GTAC	7 cut(s)	10, 40, 622, 805, 909, 959, 1816
AfiI	CCNNNNNNNGG	9 cut(s)	630, 665, 920, 944, 1298, 1400, 1673, 1913, 2045
AgeI	ACCGGT	1 cut(s)	393
AjuI	GAANNNNNNNTTGG	2 cut(s)	1441, 1473
Alw21I	GWGCWC	2 cut(s)	1262, 1981
Alw26I	GTCTC	4 cut(s)	55, 1030, 1687, 1843
AlwI	GGATC	4 cut(s)	276, 338, 1963, 2057
AlwNI	CAGNNNCTG	1 cut(s)	821
Ama87I	CYCGRG	1 cut(s)	261
AoxI	GGCC	5 cut(s)	202, 538, 982, 1391, 1910
ApaI	GGGCCC	2 cut(s)	206, 986
ApeKI	GCWGC	6 cut(s)	62, 740, 791, 1373, 1745, 1998
ApoI	RAATTY	5 cut(s)	1027, 1443, 1474, 1762, 1929
ArsI	GACNNNNNNTTYG	2 cut(s)	1334, 1366
AsiGI	ACCGGT	1 cut(s)	393
Asp718I	GGTACC	1 cut(s)	620
AspA2I	CCTAGG	1 cut(s)	139
AspS9I	GGNCC	8 cut(s)	202, 203, 551, 965, 982, 983, 1895, 2036
AsuHPI	GGTGA	8 cut(s)	161, 205, 437, 695, 760, 1065, 1532, 2064
AvaI	CYCGRG	1 cut(s)	261
AvaII	GGWCC	4 cut(s)	551, 965, 1895, 2036
AvrII	CCTAGG	1 cut(s)	139
BaeGI	GKGCMC	2 cut(s)	206, 986
BaeI	ACNNNNGTAYC	2 cut(s)	759, 792
BanI	GGYRCC	1 cut(s)	620
BanII	GRGCYC	3 cut(s)	206, 986, 1262
BarI	GAAGNNNNNNTAC	2 cut(s)	796, 828
BbrPI	CACGTG	1 cut(s)	1976
BbsI	GAAGAC	2 cut(s)	1103, 1344
Bbv12I	GWGCWC	2 cut(s)	1262, 1981
BbvCI	CCTCAGC	1 cut(s)	1668
BbvI	GCAGC	6 cut(s)	49, 752, 803, 1385, 1732, 2010
BceAI	ACGGC	2 cut(s)	1406, 1521
BciVI	GTATCC	1 cut(s)	1082
BcoDI	GTCTC	4 cut(s)	55, 1030, 1687, 1843
BfaI	CTAG	4 cut(s)	140, 843, 1134, 1805
BfmI	CTRYAG	1 cut(s)	492
BfuAI	ACCTGC	2 cut(s)	31, 1101
BfuI	GTATCC	1 cut(s)	1082
BglI	GCCNNNNNGGC	1 cut(s)	1909
BisI	GCNGC	7 cut(s)	63, 741, 792, 1166, 1374, 1746, 1999
BlnI	CCTAGG	1 cut(s)	139
BlsI	GCNGC	7 cut(s)	64, 742, 793, 1167, 1375, 1747, 2000
Bme18I	GGWCC	4 cut(s)	551, 965, 1895, 2036
BmeT110I	CYCGRG	1 cut(s)	261
BmgT120I	GGNCC	8 cut(s)	202, 203, 551, 965, 982, 983, 1895, 2036
BmiI	GGNNCC	9 cut(s)	145, 203, 204, 601, 622, 879, 983, 984, 1182
BmsI	GCATC	8 cut(s)	35, 142, 211, 376, 727, 1202, 1732, 1869
BpiI	GAAGAC	2 cut(s)	1103, 1344
BpmI	CTGGAG	2 cut(s)	1620, 2061
Bpu10I	CCTNAGC	1 cut(s)	1668
BpuEI	CTTGAG	3 cut(s)	324, 1380, 1629
BsaAI	YACGTR	1 cut(s)	1976
BsaHI	GRCGYC	3 cut(s)	387, 1832, 2030
BsaI	GGTCTC	4 cut(s)	55, 1030, 1687, 1843
BsaWI	WCCGGW	3 cut(s)	393, 596, 2033
Bsc4I	CCNNNNNNNGG	9 cut(s)	630, 665, 920, 944, 1298, 1400, 1673, 1913, 2045
Bse118I	RCCGGY	2 cut(s)	146, 393
Bse1I	ACTGG	5 cut(s)	945, 1040, 1270, 1660, 1812
BseGI	GGATG	7 cut(s)	226, 313, 949, 1274, 1363, 1556, 1723
BseLI	CCNNNNNNNGG	9 cut(s)	630, 665, 920, 944, 1298, 1400, 1673, 1913, 2045
BseMII	CTCAG	5 cut(s)	456, 1682, 1717, 1791, 1956
BseNI	ACTGG	5 cut(s)	945, 1040, 1270, 1660, 1812
BseRI	GAGGAG	1 cut(s)	2058
BseSI	GKGCMC	2 cut(s)	206, 986
BseXI	GCAGC	6 cut(s)	49, 752, 803, 1385, 1732, 2010
BseYI	CCCAGC	3 cut(s)	1185, 1253, 1575
Bsh1236I	CGCG	1 cut(s)	126
BshFI	GGCC	5 cut(s)	204, 540, 984, 1393, 1912
BshNI	GGYRCC	1 cut(s)	620
BshTI	ACCGGT	1 cut(s)	393
BsiHKAI	GWGCWC	2 cut(s)	1262, 1981
BsiHKCI	CYCGRG	1 cut(s)	261
BsiSI	CCGG	4 cut(s)	147, 394, 597, 2034
BslFI	GGGAC	3 cut(s)	482, 646, 1416
BslI	CCNNNNNNNGG	9 cut(s)	630, 665, 920, 944, 1298, 1400, 1673, 1913, 2045
BsmAI	GTCTC	4 cut(s)	55, 1030, 1687, 1843
BsmFI	GGGAC	3 cut(s)	482, 646, 1416
BsnI	GGCC	5 cut(s)	204, 540, 984, 1393, 1912
Bso31I	GGTCTC	4 cut(s)	55, 1030, 1687, 1843
BsoBI	CYCGRG	1 cut(s)	261
Bsp120I	GGGCCC	2 cut(s)	202, 982
Bsp1286I	GDGCHC	4 cut(s)	206, 986, 1262, 1981
Bsp143I	GATC	5 cut(s)	208, 268, 343, 1968, 2062
Bsp19I	CCATGG	1 cut(s)	679
BspACI	CCGC	8 cut(s)	126, 347, 412, 743, 794, 1115, 1166, 1400
BspANI	GGCC	5 cut(s)	204, 540, 984, 1393, 1912
BspCNI	CTCAG	5 cut(s)	457, 1681, 1716, 1790, 1957
BspFNI	CGCG	1 cut(s)	126
BspLI	GGNNCC	9 cut(s)	145, 203, 204, 601, 622, 879, 983, 984, 1182
BspMI	ACCTGC	2 cut(s)	31, 1101
BspPI	GGATC	4 cut(s)	276, 338, 1963, 2057
BspQI	GCTCTTC	1 cut(s)	235
BspT107I	GGYRCC	1 cut(s)	620
BspTNI	GGTCTC	4 cut(s)	55, 1030, 1687, 1843
BsrFI	RCCGGY	2 cut(s)	146, 393
BsrI	ACTGG	5 cut(s)	945, 1040, 1270, 1660, 1812
BssAI	RCCGGY	2 cut(s)	146, 393
BssMI	GATC	5 cut(s)	208, 268, 343, 1968, 2062
BssNI	GRCGYC	3 cut(s)	387, 1832, 2030
BssT1I	CCWWGG	4 cut(s)	66, 139, 679, 977
Bst4CI	ACNGT	8 cut(s)	496, 762, 889, 1570, 1653, 1819, 1992, 2058
Bst6I	CTCTTC	1 cut(s)	235
BstACI	GRCGYC	3 cut(s)	387, 1832, 2030
BstAPI	GCANNNNNTGC	1 cut(s)	746
BstBAI	YACGTR	1 cut(s)	1976
BstC8I	GCNNGC	4 cut(s)	1170, 1191, 1251, 1437
BstDEI	CTNAG	6 cut(s)	363, 465, 1668, 1703, 1777, 1965
BstDSI	CCRYGG	2 cut(s)	679, 1388
BstENI	CCTNNNNNAGG	2 cut(s)	1671, 2043
BstF5I	GGATG	7 cut(s)	226, 313, 949, 1274, 1363, 1556, 1723
BstFNI	CGCG	1 cut(s)	126
BstKTI	GATC	5 cut(s)	211, 271, 346, 1971, 2065
BstMAI	GTCTC	4 cut(s)	55, 1030, 1687, 1843
BstMBI	GATC	5 cut(s)	208, 268, 343, 1968, 2062
BstNSI	RCATGY	1 cut(s)	1172
BstSFI	CTRYAG	1 cut(s)	492
BstSLI	GKGCMC	2 cut(s)	206, 986
BstUI	CGCG	1 cut(s)	126
BstV1I	GCAGC	6 cut(s)	49, 752, 803, 1385, 1732, 2010
BstV2I	GAAGAC	2 cut(s)	1103, 1344
BstX2I	RGATCY	2 cut(s)	343, 1968
BstYI	RGATCY	2 cut(s)	343, 1968
BsuI	GTATCC	1 cut(s)	1082
BsuRI	GGCC	5 cut(s)	204, 540, 984, 1393, 1912
BtgI	CCRYGG	2 cut(s)	679, 1388
BtgZI	GCGATG	1 cut(s)	1401
BtsCI	GGATG	7 cut(s)	226, 313, 949, 1274, 1363, 1556, 1723
BtsI	GCAGTG	2 cut(s)	914, 1244
BtsIMutI	CAGTG	5 cut(s)	914, 938, 1022, 1244, 1711
BveI	ACCTGC	2 cut(s)	31, 1101
Cac8I	GCNNGC	4 cut(s)	1170, 1191, 1251, 1437
CaiI	CAGNNNCTG	1 cut(s)	821
Cfr10I	RCCGGY	2 cut(s)	146, 393
Cfr13I	GGNCC	8 cut(s)	202, 203, 551, 965, 982, 983, 1895, 2036
CseI	GACGC	3 cut(s)	1296, 1840, 2019
CsiI	ACCWGGT	1 cut(s)	1297
Csp6I	GTAC	7 cut(s)	9, 39, 621, 804, 908, 958, 1815
CspAI	ACCGGT	1 cut(s)	393
CspCI	CAANNNNNGTGG	2 cut(s)	1143, 1178
CviAII	CATG	7 cut(s)	55, 680, 836, 1000, 1169, 1312, 1714
CviQI	GTAC	7 cut(s)	9, 39, 621, 804, 908, 958, 1815
DdeI	CTNAG	6 cut(s)	363, 465, 1668, 1703, 1777, 1965
DpnI	GATC	5 cut(s)	210, 270, 345, 1970, 2064
DpnII	GATC	5 cut(s)	208, 268, 343, 1968, 2062
Eam1104I	CTCTTC	1 cut(s)	235
EarI	CTCTTC	1 cut(s)	235
EciI	GGCGGA	1 cut(s)	1104
Ecl136II	GAGCTC	1 cut(s)	1260
Eco130I	CCWWGG	4 cut(s)	66, 139, 679, 977
Eco24I	GRGCYC	3 cut(s)	206, 986, 1262
Eco31I	GGTCTC	4 cut(s)	55, 1030, 1687, 1843
Eco47I	GGWCC	4 cut(s)	551, 965, 1895, 2036
Eco53kI	GAGCTC	1 cut(s)	1260
Eco57I	CTGAAG	1 cut(s)	798
Eco72I	CACGTG	1 cut(s)	1976
Eco88I	CYCGRG	1 cut(s)	261
EcoICRI	GAGCTC	1 cut(s)	1260
EcoNI	CCTNNNNNAGG	2 cut(s)	1671, 2043
EcoO109I	RGGNCCY	4 cut(s)	202, 203, 982, 1895
EcoRI	GAATTC	2 cut(s)	1027, 1443
EcoT14I	CCWWGG	4 cut(s)	66, 139, 679, 977
EcoT22I	ATGCAT	1 cut(s)	1174
EcoT38I	GRGCYC	3 cut(s)	206, 986, 1262
ErhI	CCWWGG	4 cut(s)	66, 139, 679, 977
FaeI	CATG	7 cut(s)	58, 683, 839, 1003, 1172, 1315, 1717
FalI	AAGNNNNNCTT	2 cut(s)	1389, 1421
FaqI	GGGAC	3 cut(s)	482, 646, 1416
FatI	CATG	7 cut(s)	54, 679, 835, 999, 1168, 1311, 1713
FauI	CCCGC	2 cut(s)	405, 1393
Fnu4HI	GCNGC	7 cut(s)	63, 741, 792, 1166, 1374, 1746, 1999
FokI	GGATG	7 cut(s)	233, 320, 956, 1281, 1350, 1543, 1710
FriOI	GRGCYC	3 cut(s)	206, 986, 1262
Fsp4HI	GCNGC	7 cut(s)	63, 741, 792, 1166, 1374, 1746, 1999
FspBI	CTAG	4 cut(s)	140, 843, 1134, 1805
GluI	GCNGC	7 cut(s)	63, 741, 792, 1166, 1374, 1746, 1999
GsaI	CCCAGC	3 cut(s)	1189, 1257, 1579
GsuI	CTGGAG	2 cut(s)	1620, 2061
HaeIII	GGCC	5 cut(s)	204, 540, 984, 1393, 1912
HapII	CCGG	4 cut(s)	147, 394, 597, 2034
HgaI	GACGC	3 cut(s)	1296, 1840, 2019
Hin1I	GRCGYC	3 cut(s)	387, 1832, 2030
Hin1II	CATG	7 cut(s)	58, 683, 839, 1003, 1172, 1315, 1717
HincII	GTYRAC	1 cut(s)	391
HindII	GTYRAC	1 cut(s)	391
HinfI	GANTC	8 cut(s)	181, 259, 273, 607, 1552, 1791, 1808, 2086
HpaII	CCGG	4 cut(s)	147, 394, 597, 2034
HphI	GGTGA	8 cut(s)	161, 205, 437, 695, 760, 1065, 1532, 2064
Hpy166II	GTNNAC	4 cut(s)	41, 107, 391, 1283
Hpy188I	TCNGA	6 cut(s)	186, 258, 664, 882, 1830, 1908
Hpy188III	TCNNGA	7 cut(s)	294, 341, 780, 1035, 1461, 1692, 1805
Hpy8I	GTNNAC	4 cut(s)	41, 107, 391, 1283
Hpy99I	CGWCG	1 cut(s)	389
HpyAV	CCTTC	6 cut(s)	637, 1065, 1107, 1332, 1419, 1570
HpyCH4III	ACNGT	8 cut(s)	496, 762, 889, 1570, 1653, 1819, 1992, 2058
HpyCH4IV	ACGT	2 cut(s)	387, 1975
HpyCH4V	TGCA	9 cut(s)	26, 155, 740, 929, 1172, 1193, 1373, 1435, 2009
HpyF3I	CTNAG	6 cut(s)	363, 465, 1668, 1703, 1777, 1965
HpySE526I	ACGT	2 cut(s)	387, 1975
Hsp92I	GRCGYC	3 cut(s)	387, 1832, 2030
Hsp92II	CATG	7 cut(s)	58, 683, 839, 1003, 1172, 1315, 1717
KpnI	GGTACC	1 cut(s)	624
Kzo9I	GATC	5 cut(s)	208, 268, 343, 1968, 2062
LguI	GCTCTTC	1 cut(s)	235
Lsp1109I	GCAGC	6 cut(s)	49, 752, 803, 1385, 1732, 2010
LweI	GCATC	8 cut(s)	35, 142, 211, 376, 727, 1202, 1732, 1869
MabI	ACCWGGT	1 cut(s)	1297
MaeI	CTAG	4 cut(s)	140, 843, 1134, 1805
MaeII	ACGT	2 cut(s)	387, 1975
MaeIII	GTNAC	4 cut(s)	766, 1586, 1706, 1856
MalI	GATC	5 cut(s)	210, 270, 345, 1970, 2064
MboI	GATC	5 cut(s)	208, 268, 343, 1968, 2062
MboII	GAAGA	5 cut(s)	252, 981, 1023, 1103, 1344
MflI	RGATCY	2 cut(s)	343, 1968
MhlI	GDGCHC	4 cut(s)	206, 986, 1262, 1981
MlyI	GAGTC	2 cut(s)	253, 1785
MmeI	TCCRAC	2 cut(s)	378, 905
Mph1103I	ATGCAT	1 cut(s)	1174
MseI	TTAA	2 cut(s)	434, 440
MslI	CAYNNNNRTG	1 cut(s)	1004
MspA1I	CMGCKG	5 cut(s)	35, 286, 716, 743, 794
MspI	CCGG	4 cut(s)	147, 394, 597, 2034
MvnI	CGCG	1 cut(s)	126
NcoI	CCATGG	1 cut(s)	679
NdeII	GATC	5 cut(s)	208, 268, 343, 1968, 2062
NlaIII	CATG	7 cut(s)	58, 683, 839, 1003, 1172, 1315, 1717
NlaIV	GGNNCC	9 cut(s)	145, 203, 204, 601, 622, 879, 983, 984, 1182
NmuCI	GTSAC	3 cut(s)	766, 1586, 1706
NsiI	ATGCAT	1 cut(s)	1174
NspI	RCATGY	1 cut(s)	1172
PaeI	GCATGC	1 cut(s)	1172
PaqCI	CACCTGC	1 cut(s)	31
PciSI	GCTCTTC	1 cut(s)	235
PcsI	WCGNNNNNNNCGW	1 cut(s)	268
PfeI	GAWTC	6 cut(s)	181, 273, 607, 1552, 1808, 2086
PflMI	CCANNNNNTGG	2 cut(s)	665, 944
PfoI	TCCNGGA	4 cut(s)	553, 852, 2038, 2107
PinAI	ACCGGT	1 cut(s)	393
PkrI	GCNGC	7 cut(s)	64, 742, 793, 1167, 1375, 1747, 2000
PleI	GAGTC	2 cut(s)	253, 1785
PmaCI	CACGTG	1 cut(s)	1976
PmlI	CACGTG	1 cut(s)	1976
PpsI	GAGTC	2 cut(s)	253, 1785
Ppu21I	YACGTR	1 cut(s)	1976
PpuMI	RGGWCCY	1 cut(s)	1895
Psp124BI	GAGCTC	1 cut(s)	1262
Psp5II	RGGWCCY	1 cut(s)	1895
PspCI	CACGTG	1 cut(s)	1976
PspFI	CCCAGC	3 cut(s)	1185, 1253, 1575
PspN4I	GGNNCC	9 cut(s)	145, 203, 204, 601, 622, 879, 983, 984, 1182
PspOMI	GGGCCC	2 cut(s)	202, 982
PspPI	GGNCC	8 cut(s)	202, 203, 551, 965, 982, 983, 1895, 2036
PspPPI	RGGWCCY	1 cut(s)	1895
PstNI	CAGNNNCTG	1 cut(s)	821
PsuI	RGATCY	2 cut(s)	343, 1968
PvuII	CAGCTG	3 cut(s)	35, 286, 716
RsaI	GTAC	7 cut(s)	10, 40, 622, 805, 909, 959, 1816
RsaNI	GTAC	7 cut(s)	9, 39, 621, 804, 908, 958, 1815
RseI	CAYNNNNRTG	1 cut(s)	1004
SacI	GAGCTC	1 cut(s)	1262
SapI	GCTCTTC	1 cut(s)	235
SaqAI	TTAA	2 cut(s)	434, 440
SatI	GCNGC	7 cut(s)	63, 741, 792, 1166, 1374, 1746, 1999
Sau3AI	GATC	5 cut(s)	208, 268, 343, 1968, 2062
Sau96I	GGNCC	8 cut(s)	202, 203, 551, 965, 982, 983, 1895, 2036
SchI	GAGTC	2 cut(s)	253, 1785
SduI	GDGCHC	4 cut(s)	206, 986, 1262, 1981
SexAI	ACCWGGT	1 cut(s)	1297
SfaNI	GCATC	8 cut(s)	35, 142, 211, 376, 727, 1202, 1732, 1869
SfcI	CTRYAG	1 cut(s)	492
SinI	GGWCC	4 cut(s)	551, 965, 1895, 2036
SmiMI	CAYNNNNRTG	1 cut(s)	1004
SmlI	CTYRAG	3 cut(s)	339, 1395, 1644
SmoI	CTYRAG	3 cut(s)	339, 1395, 1644
SphI	GCATGC	1 cut(s)	1172
SsiI	CCGC	8 cut(s)	126, 347, 412, 743, 794, 1115, 1166, 1400
SspMI	CTAG	4 cut(s)	140, 843, 1134, 1805
SstI	GAGCTC	1 cut(s)	1262
StyI	CCWWGG	4 cut(s)	66, 139, 679, 977
TaaI	ACNGT	8 cut(s)	496, 762, 889, 1570, 1653, 1819, 1992, 2058
TaiI	ACGT	2 cut(s)	390, 1978
TaqI	TCGA	5 cut(s)	271, 1034, 1543, 1691, 1960
TaqII	GACCGA	1 cut(s)	1867
TatI	WGTACW	1 cut(s)	803
TauI	GCSGC	1 cut(s)	1168
TfiI	GAWTC	6 cut(s)	181, 273, 607, 1552, 1808, 2086
Tru1I	TTAA	2 cut(s)	434, 440
Tru9I	TTAA	2 cut(s)	434, 440
TscAI	CASTG	5 cut(s)	921, 945, 1029, 1251, 1711
TseFI	GTSAC	3 cut(s)	766, 1586, 1706
TseI	GCWGC	6 cut(s)	62, 740, 791, 1373, 1745, 1998
Tsp45I	GTSAC	3 cut(s)	766, 1586, 1706
TspDTI	ATGAA	4 cut(s)	695, 705, 1089, 1219
TspRI	CASTG	5 cut(s)	921, 945, 1029, 1251, 1711
Van91I	CCANNNNNTGG	2 cut(s)	665, 944
VpaK11BI	GGWCC	4 cut(s)	551, 965, 1895, 2036
XagI	CCTNNNNNAGG	2 cut(s)	1671, 2043
XapI	RAATTY	5 cut(s)	1027, 1443, 1474, 1762, 1929
XbaI	TCTAGA	1 cut(s)	1804
XceI	RCATGY	1 cut(s)	1172
XmaJI	CCTAGG	1 cut(s)	139
XspI	CTAG	4 cut(s)	140, 843, 1134, 1805
ZraI	GACGTC	1 cut(s)	388
Zsp2I	ATGCAT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.