Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003736

Physical Location & Seq

Genomic Coordinates Reverse (-)

86771576 .. 86776201

Gene Structure 4626 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036946

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGATACTTGGACTGAGACCCGGCCCATGTTCATCTGCCCTGTTGTAACTTCATTAGGTTCTCATAAAAGTTTAGAAGAAACCTCAAGAACAGTTCGACTCCAAACGCAGGTTGAGGCGACTTGGAGGAAGCTTAAGGAAAATAAAGAATTGGAGTTCTTTGAATTAAGGCCACTCAATTGTAGTGGGCATTGGGTAGAGGGGATGAGTGCAAAGGTCGATACGTCTGCATCGGGAACTGGTGGCCAAAAGGTCTCCAAGTTTGCTGCTAAGTCTGGATTTGTTATACCGAAAAACAAGTTATCAGGTTCACTGGTGCCCATCTTCCGGGGAGACAAAAATGTTGGAGCCAGTGATCATGGTGGTGGAGAAAGTAAGAAACAGGTTCAGAGGAAAACAAAATGGGGTGCTGATCTGACTCAAGATGCTTCTGTTAGAAAGGGAAGAGCATTAGCTTATCAGACTCGGGTGGATCAAATTACACAACAGCTGAAATCTGGAATATCAGAGTTTGGAAACAATGAGAACGTGCCATCACCATCTCAGGATCCAGATCACATATCCTCTACATATCAAGTTGACAAGGAGGGTGCAGAACAATTGGAACTGGAAAAGCGGGAAGCCATAGGTGAAATACTAAAGTTGAATCCAAATTACAAGGCTCCAGCTGATTATAAACCTTTGTTGAAAGAGGCAACAGTTCCTATTCCTGTCAATGAATACCCAACATACAATATTCTTGGTCTGATATATGGGCCTGGAGGTGATAATCAGAAGCAATTAGAAAAGGAAACAGGAGCTAAGATTCAAGTCTATGGTACCAAAGCAGAGACGGGAGAGAAGGCTGAAATAAAACAATATGCTGGGAGTGAAATCCAGGCTGAATATGAAAAGTTATATGTTCATGTATCAGCAGACACATTTGAGAAAGTAGATGCAGCTGTTGCTGTAATCGAACTACTAGTCACCTCTGTATCTGGAAATCTGTCGGCCGTTGCCAAAACAGCTTTGGGTGATAATAATGCTCAAGTTCCTAGTCAAGGCCAGGACAGAACCACCTCAGATATGGTTCCAACTACAATGGTAGACCAAGGACCGATACAACCAGCGACAGGACCTACACAAACTCCACCGCATGTGCAGTTTCAGTACCCTGGTCCATTTTTCTCCACAGGCCAACCTGGCAGTCCAATGAATCTACCGGGCTTCACACCAATGAATTCTCAAAGGCCTATTCTCAACAATGCTGCCCATCCATCAACATCACCTTTCAACTCGACAAACCTGCCGTCATTATTTGGGCCTCCACCAGCTCTTTTTCCCCAGACACAACACCTACCACCAGTGGTTTTGCAGCATACATATATGCCTCAGACCAGTCCTGGTTCTCTTGGCGCACCAAGAAACTTCTCCATGATGACTTCCCAGCCTTCATCAGTTCAAACTAATGTTTCAGCTCCAGTTACATTCTTGGGAAATCGACCCCCAACAGGCCAAAGTAACCATCCCCTTGAATCAATACCTGACTGGCAACTGACACCTGCTGGAAGCTCTGCTGGATGGAGCAGACCACCGACATCTGCAGGTTTCAGTAATAATATGCACATGGCACCTAATCCTCTAAATCATCTCAATGCAGCTCCAACTTTTACTGCTGTGCCACAAGCTCAAGTTGGCCTTCCTTCTACTTTACCAATGCCAGCACTTGCTCAACCCAAACCATATATGAGCCCTATGTCAGGTTCCGCTCCAGCTCCTTCACCGGGCGTAGTTACATCTTTACATCCACCTCAGCCACCAAGAGTCCCTAGTTCTGTTTCAGGAAATGTACCAAATTTCAGTCCCATTAAGCCACTGACAACTCCAAGTCCTGGTGATTTCACTTTCCAGCCTCACCGACCGCAAAATCCAGCCTTTCAAACAGTTCCCCAACAAAGCAATCAGTTTTCAGTTCACAATGCTCACCCAGCTGGACCAATGGTGCGATCACAGGTACCATCTTTGCAGTTGCCTGTGCGACATATGACTCCTCAGCCAGGCAATCAGGTGTTATCAAGGCCACAGGTTGGTGACCAGATTAGTCAACCTTCAGCTCATATAAATGCTGTCCAGTTTGCTAGAAATTCAACTGCCATTTCAGTTCCTCCCAGACTTGCAACATTTCCGGACATCAATCCTGTTGCATCTAGAACGTCACTCCTGCCAATGAGACCGGGGAACTTTAATCAAGCTCACCAAATGCCCAATTTGCCCAGTCCTTTGCCTCCAAGGCCAGGAGGTCATATTCAAATTCAGCACAGTTATCCTGCTCAATTGGCCCCAAATCAACAGTTCATCAACAATCCATTTGCATCTGGTAAGTCGTCTAATCCTGGAGGACACCAACTTTATGATCCATTCTCGCCCACTTCTGACTCAACAGCAAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 SF1-HH

Protein Analysis

811

Amino Acids

87.12

Weight (kDa)

9.11

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	125 - 226	9.3e-08	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	240 - 322	7.8e-14	KHDC4/BBP-like, KH-domain type I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G32940
fragaria_vesca	FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840
malus_domestica	MD03G1008800.v1.1 MD03G1008900.v1.1 MD03G1009300.v1.1 MD03G1009900.v1.1 MD03G1010000.v1.1 MD03G1010200.v1.1
prunus_persica	Prupe.6G010100_v2.0.a1
pyrus_communis	pycom03g00890 pycom03g00910 pycom11g00730 pycom11g00740 pycom11g00780
rosa_chinensis	RchiOBHm_Chr5g0081541
rosa_laevigata	RLG00000036946
rosa_multiflora	Rmu_co8214750.1_g000001 Rmu_co8505191.1_g000001 Rmu_sc0028842.1_g000001 Rmu_sc0038011.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002010
rosa_rugosa	Rorug05G0477200
rosa_samantha	Rh5AG528500 Rh5BG553300 Rh5CG576100 Rh5DG563400
rosa_wichuraiana	Rw5G049170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	675
AarI	CACCTGC	1 cut(s)	1549
Acc36I	ACCTGC	4 cut(s)	100, 1293, 1549, 1574
Acc65I	GGTACC	2 cut(s)	818, 1993
AccB1I	GGYRCC	4 cut(s)	316, 818, 1609, 1993
AccB7I	CCANNNNNTGG	2 cut(s)	1871, 2066
AccBSI	CCGCTC	1 cut(s)	1748
AccI	GTMKAC	1 cut(s)	1086
AccIII	TCCGGA	1 cut(s)	2164
AciI	CCGC	4 cut(s)	616, 1133, 1746, 1901
AclWI	GGATC	4 cut(s)	480, 542, 555, 2387
AcoI	YGGCCR	2 cut(s)	244, 990
AcsI	RAATTY	4 cut(s)	1219, 1834, 2122, 2289
AcuI	CTGAAG	1 cut(s)	2073
AfaI	GTAC	4 cut(s)	820, 1151, 1830, 1995
AflII	CTTAAG	1 cut(s)	134
AhlI	ACTAGT	1 cut(s)	961
Alw26I	GTCTC	5 cut(s)	11, 259, 327, 824, 2203
AlwI	GGATC	4 cut(s)	480, 542, 555, 2387
Ama87I	CYCGRG	1 cut(s)	465
Aor13HI	TCCGGA	1 cut(s)	2164
ApeKI	GCWGC	5 cut(s)	266, 938, 1247, 1354, 1637
ApoI	RAATTY	4 cut(s)	1219, 1834, 2122, 2289
ArsI	GACNNNNNNTTYG	4 cut(s)	948, 980, 1274, 1306
Asp718I	GGTACC	2 cut(s)	818, 1993
AspLEI	GCGC	1 cut(s)	1397
AspS9I	GGNCC	8 cut(s)	24, 755, 1094, 1115, 1157, 1301, 1973, 2317
AsuC2I	CCSGG	5 cut(s)	22, 329, 1203, 1764, 2214
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	4 cut(s)	1094, 1115, 1157, 1973
BaeGI	GKGCMC	1 cut(s)	321
BaeI	ACNNNNGTAYC	2 cut(s)	957, 990
BalI	TGGCCA	1 cut(s)	246
BamHI	GGATCC	1 cut(s)	547
BanI	GGYRCC	4 cut(s)	316, 818, 1609, 1993
BanII	GRGCYC	1 cut(s)	1733
BbvCI	CCTCAGC	2 cut(s)	1791, 2031
BbvI	GCAGC	5 cut(s)	253, 950, 1234, 1366, 1649
BccI	CCATC	8 cut(s)	329, 541, 547, 1260, 1264, 1512, 1554, 2005
BceAI	ACGGC	2 cut(s)	977, 1273
BcgI	CGANNNNNNTGC	4 cut(s)	209, 243, 1267, 1301
BclI	TGATCA	1 cut(s)	355
BcnI	CCSGG	5 cut(s)	22, 329, 1203, 1764, 2214
BcoDI	GTCTC	5 cut(s)	11, 259, 327, 824, 2203
BcuI	ACTAGT	1 cut(s)	961
BfaI	CTAG	5 cut(s)	962, 1035, 1809, 2118, 2187
BfmI	CTRYAG	1 cut(s)	1581
BfrI	CTTAAG	1 cut(s)	134
BfuAI	ACCTGC	4 cut(s)	100, 1293, 1549, 1574
BglI	GCCNNNNNGGC	2 cut(s)	1182, 2269
BisI	GCNGC	5 cut(s)	267, 939, 1248, 1355, 1638
BlsI	GCNGC	5 cut(s)	268, 940, 1249, 1356, 1639
Bme18I	GGWCC	4 cut(s)	1094, 1115, 1157, 1973
BmeT110I	CYCGRG	1 cut(s)	465
BmgT120I	GGNCC	8 cut(s)	24, 755, 1094, 1115, 1157, 1301, 1973, 2317
BmrI	ACTGGG	1 cut(s)	2247
BmsI	GCATC	5 cut(s)	239, 415, 925, 2192, 2360
BmuI	ACTGGG	1 cut(s)	2247
BpmI	CTGGAG	5 cut(s)	648, 780, 1443, 1734, 2394
Bpu10I	CCTNAGC	2 cut(s)	1791, 2031
BpuEI	CTTGAG	4 cut(s)	70, 405, 1011, 1653
BpuMI	CCSGG	5 cut(s)	22, 329, 1203, 1764, 2214
BsaBI	GATNNNNATC	1 cut(s)	552
BsaI	GGTCTC	3 cut(s)	11, 259, 2203
BsaJI	CCNNGG	5 cut(s)	328, 1090, 1153, 2213, 2267
BsaWI	WCCGGW	1 cut(s)	2164
BsaXI	ACNNNNNCTCC	2 cut(s)	1111, 1141
Bse8I	GATNNNNATC	1 cut(s)	552
BseAI	TCCGGA	1 cut(s)	2164
BseDI	CCNNGG	5 cut(s)	328, 1090, 1153, 2213, 2267
BseGI	GGATG	5 cut(s)	210, 1252, 1504, 1565, 1783
BseJI	GATNNNNATC	1 cut(s)	552
BseMII	CTCAG	6 cut(s)	6, 557, 1074, 1385, 1805, 2045
BseRI	GAGGAG	1 cut(s)	2019
BseSI	GKGCMC	1 cut(s)	321
BseX3I	CGGCCG	1 cut(s)	990
BseXI	GCAGC	5 cut(s)	253, 950, 1234, 1366, 1649
BseYI	CCCAGC	3 cut(s)	863, 1425, 1966
BsgI	GTGCAG	2 cut(s)	612, 1160
Bsh1285I	CGRYCG	2 cut(s)	993, 1901
BshNI	GGYRCC	4 cut(s)	316, 818, 1609, 1993
BsiEI	CGRYCG	2 cut(s)	993, 1901
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	6 cut(s)	22, 328, 1202, 1763, 2165, 2213
BslFI	GGGAC	2 cut(s)	1790, 1827
BsmAI	GTCTC	5 cut(s)	11, 259, 327, 824, 2203
BsmBI	CGTCTC	1 cut(s)	824
BsmFI	GGGAC	2 cut(s)	1790, 1827
Bso31I	GGTCTC	3 cut(s)	11, 259, 2203
BsoBI	CYCGRG	1 cut(s)	465
Bsp1286I	GDGCHC	2 cut(s)	321, 1733
Bsp13I	TCCGGA	1 cut(s)	2164
Bsp143I	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
BspACI	CCGC	4 cut(s)	616, 1133, 1746, 1901
BspCNI	CTCAG	6 cut(s)	7, 556, 1073, 1384, 1804, 2044
BspEI	TCCGGA	1 cut(s)	2164
BspMAI	CTGCAG	1 cut(s)	1585
BspMI	ACCTGC	4 cut(s)	100, 1293, 1549, 1574
BspPI	GGATC	4 cut(s)	480, 542, 555, 2387
BspQI	GCTCTTC	1 cut(s)	439
BspT107I	GGYRCC	4 cut(s)	316, 818, 1609, 1993
BspTI	CTTAAG	1 cut(s)	134
BspTNI	GGTCTC	3 cut(s)	11, 259, 2203
BsrBI	CCGCTC	1 cut(s)	1748
BssECI	CCNNGG	5 cut(s)	328, 1090, 1153, 2213, 2267
BssMI	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
BssT1I	CCWWGG	2 cut(s)	1090, 2267
Bst4CI	ACNGT	5 cut(s)	94, 700, 1924, 2300, 2331
Bst6I	CTCTTC	1 cut(s)	439
BstAFI	CTTAAG	1 cut(s)	134
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstC8I	GCNNGC	1 cut(s)	1701
BstDEI	CTNAG	8 cut(s)	15, 270, 543, 801, 1060, 1371, 1791, 2031
BstEII	GGTNACC	1 cut(s)	2069
BstENI	CCTNNNNNAGG	3 cut(s)	1038, 1737, 2034
BstF5I	GGATG	5 cut(s)	210, 1252, 1504, 1565, 1783
BstHHI	GCGC	1 cut(s)	1397
BstKTI	GATC	7 cut(s)	358, 415, 475, 550, 556, 1988, 2395
BstMAI	GTCTC	5 cut(s)	11, 259, 327, 824, 2203
BstMBI	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
BstMCI	CGRYCG	2 cut(s)	993, 1901
BstMWI	GCNNNNNNNGC	7 cut(s)	944, 1004, 1182, 1967, 2248, 2269, 2315
BstNSI	RCATGY	1 cut(s)	1139
BstPI	GGTNACC	1 cut(s)	2069
BstSFI	CTRYAG	1 cut(s)	1581
BstSLI	GKGCMC	1 cut(s)	321
BstV1I	GCAGC	5 cut(s)	253, 950, 1234, 1366, 1649
BstX2I	RGATCY	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	547
BstZI	CGGCCG	1 cut(s)	990
BtsCI	GGATG	5 cut(s)	210, 1252, 1504, 1565, 1783
BtsIMutI	CAGTG	4 cut(s)	311, 358, 1350, 1853
BveI	ACCTGC	4 cut(s)	100, 1293, 1549, 1574
Cac8I	GCNNGC	1 cut(s)	1701
CfoI	GCGC	1 cut(s)	1397
Cfr13I	GGNCC	8 cut(s)	24, 755, 1094, 1115, 1157, 1301, 1973, 2317
Csp6I	GTAC	4 cut(s)	819, 1150, 1829, 1994
CspCI	CAANNNNNGTGG	2 cut(s)	166, 201
CviAII	CATG	6 cut(s)	28, 359, 905, 1136, 1414, 1606
CviQI	GTAC	4 cut(s)	819, 1150, 1829, 1994
DdeI	CTNAG	8 cut(s)	15, 270, 543, 801, 1060, 1371, 1791, 2031
DpnI	GATC	7 cut(s)	357, 414, 474, 549, 555, 1987, 2394
DpnII	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
EaeI	YGGCCR	2 cut(s)	244, 990
EagI	CGGCCG	1 cut(s)	990
Eam1104I	CTCTTC	1 cut(s)	439
EarI	CTCTTC	1 cut(s)	439
EclXI	CGGCCG	1 cut(s)	990
Eco130I	CCWWGG	2 cut(s)	1090, 2267
Eco147I	AGGCCT	1 cut(s)	1231
Eco24I	GRGCYC	1 cut(s)	1733
Eco31I	GGTCTC	3 cut(s)	11, 259, 2203
Eco47I	GGWCC	4 cut(s)	1094, 1115, 1157, 1973
Eco52I	CGGCCG	1 cut(s)	990
Eco57I	CTGAAG	1 cut(s)	2073
Eco88I	CYCGRG	1 cut(s)	465
Eco91I	GGTNACC	1 cut(s)	2069
EcoNI	CCTNNNNNAGG	3 cut(s)	1038, 1737, 2034
EcoO109I	RGGNCCY	1 cut(s)	1115
EcoO65I	GGTNACC	1 cut(s)	2069
EcoRI	GAATTC	1 cut(s)	1219
EcoT14I	CCWWGG	2 cut(s)	1090, 2267
EcoT38I	GRGCYC	1 cut(s)	1733
ErhI	CCWWGG	2 cut(s)	1090, 2267
Esp3I	CGTCTC	1 cut(s)	824
FaeI	CATG	6 cut(s)	31, 362, 908, 1139, 1417, 1609
FalI	AAGNNNNNCTT	2 cut(s)	1662, 1694
FaqI	GGGAC	2 cut(s)	1790, 1827
FatI	CATG	6 cut(s)	27, 358, 904, 1135, 1413, 1605
FauI	CCCGC	1 cut(s)	609
FauNDI	CATATG	1 cut(s)	2022
FbaI	TGATCA	1 cut(s)	355
FblI	GTMKAC	1 cut(s)	1086
Fnu4HI	GCNGC	5 cut(s)	267, 939, 1248, 1355, 1638
FokI	GGATG	5 cut(s)	217, 1239, 1491, 1572, 1770
FriOI	GRGCYC	1 cut(s)	1733
Fsp4HI	GCNGC	5 cut(s)	267, 939, 1248, 1355, 1638
FspBI	CTAG	5 cut(s)	962, 1035, 1809, 2118, 2187
GlaI	GCGC	1 cut(s)	1396
GluI	GCNGC	5 cut(s)	267, 939, 1248, 1355, 1638
GsaI	CCCAGC	3 cut(s)	867, 1429, 1970
GsuI	CTGGAG	5 cut(s)	648, 780, 1443, 1734, 2394
HapII	CCGG	6 cut(s)	22, 328, 1202, 1763, 2165, 2213
HhaI	GCGC	1 cut(s)	1397
Hin1II	CATG	6 cut(s)	31, 362, 908, 1139, 1417, 1609
Hin6I	GCGC	1 cut(s)	1395
HinP1I	GCGC	1 cut(s)	1395
HincII	GTYRAC	2 cut(s)	580, 2084
HindII	GTYRAC	2 cut(s)	580, 2084
HindIII	AAGCTT	1 cut(s)	131
HpaII	CCGG	6 cut(s)	22, 328, 1202, 1763, 2165, 2213
Hpy166II	GTNNAC	5 cut(s)	311, 580, 1087, 1954, 2084
Hpy188I	TCNGA	9 cut(s)	390, 417, 462, 508, 747, 774, 1063, 1374, 2413
Hpy8I	GTNNAC	5 cut(s)	311, 580, 1087, 1954, 2084
HpyAV	CCTTC	6 cut(s)	835, 1440, 1688, 1692, 1767, 2097
HpyCH4III	ACNGT	5 cut(s)	94, 700, 1924, 2300, 2331
HpyCH4IV	ACGT	3 cut(s)	224, 528, 2192
HpyF10VI	GCNNNNNNNGC	7 cut(s)	944, 1004, 1182, 1967, 2248, 2269, 2315
HpyF3I	CTNAG	8 cut(s)	15, 270, 543, 801, 1060, 1371, 1791, 2031
HpySE526I	ACGT	3 cut(s)	224, 528, 2192
Hsp92II	CATG	6 cut(s)	31, 362, 908, 1139, 1417, 1609
HspAI	GCGC	1 cut(s)	1395
Kpn2I	TCCGGA	1 cut(s)	2164
KpnI	GGTACC	2 cut(s)	822, 1997
Ksp22I	TGATCA	1 cut(s)	355
Kzo9I	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
LguI	GCTCTTC	1 cut(s)	439
LmnI	GCTCC	8 cut(s)	347, 667, 797, 1462, 1563, 1645, 1753, 1759
Lsp1109I	GCAGC	5 cut(s)	253, 950, 1234, 1366, 1649
LweI	GCATC	5 cut(s)	239, 415, 925, 2192, 2360
MaeI	CTAG	5 cut(s)	962, 1035, 1809, 2118, 2187
MaeII	ACGT	3 cut(s)	224, 528, 2192
MaeIII	GTNAC	7 cut(s)	46, 964, 1462, 1499, 1771, 2069, 2193
MalI	GATC	7 cut(s)	357, 414, 474, 549, 555, 1987, 2394
MbiI	CCGCTC	1 cut(s)	1748
MboI	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
MboII	GAAGA	3 cut(s)	89, 316, 456
MfeI	CAATTG	3 cut(s)	178, 599, 2312
MflI	RGATCY	1 cut(s)	547
MhlI	GDGCHC	2 cut(s)	321, 1733
MlsI	TGGCCA	1 cut(s)	246
MluNI	TGGCCA	1 cut(s)	246
MlyI	GAGTC	6 cut(s)	93, 412, 457, 1812, 2020, 2408
MmeI	TCCRAC	3 cut(s)	325, 1097, 1667
Mox20I	TGGCCA	1 cut(s)	246
MroI	TCCGGA	1 cut(s)	2164
MscI	TGGCCA	1 cut(s)	246
MseI	TTAA	4 cut(s)	135, 167, 1848, 2223
MslI	CAYNNNNRTG	4 cut(s)	363, 1214, 1632, 2100
Msp20I	TGGCCA	1 cut(s)	246
MspA1I	CMGCKG	4 cut(s)	490, 668, 941, 1970
MspCI	CTTAAG	1 cut(s)	134
MspI	CCGG	6 cut(s)	22, 328, 1202, 1763, 2165, 2213
MunI	CAATTG	3 cut(s)	178, 599, 2312
MwoI	GCNNNNNNNGC	7 cut(s)	944, 1004, 1182, 1967, 2248, 2269, 2315
NciI	CCSGG	5 cut(s)	22, 329, 1203, 1764, 2214
NdeI	CATATG	1 cut(s)	2022
NdeII	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
NlaIII	CATG	6 cut(s)	31, 362, 908, 1139, 1417, 1609
NmuCI	GTSAC	3 cut(s)	964, 2069, 2193
NspI	RCATGY	1 cut(s)	1139
PaqCI	CACCTGC	1 cut(s)	1549
PceI	AGGCCT	1 cut(s)	1231
PciSI	GCTCTTC	1 cut(s)	439
PfeI	GAWTC	4 cut(s)	646, 805, 1195, 1514
PflMI	CCANNNNNTGG	2 cut(s)	1871, 2066
PfoI	TCCNGGA	1 cut(s)	2371
PkrI	GCNGC	5 cut(s)	268, 940, 1249, 1356, 1639
PleI	GAGTC	6 cut(s)	93, 412, 457, 1811, 2020, 2408
PpsI	GAGTC	6 cut(s)	93, 412, 457, 1811, 2020, 2408
PpuMI	RGGWCCY	1 cut(s)	1115
PsiI	TTATAA	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	1115
PspEI	GGTNACC	1 cut(s)	2069
PspFI	CCCAGC	3 cut(s)	863, 1425, 1966
PspPI	GGNCC	8 cut(s)	24, 755, 1094, 1115, 1157, 1301, 1973, 2317
PspPPI	RGGWCCY	1 cut(s)	1115
PstI	CTGCAG	1 cut(s)	1585
PsuI	RGATCY	1 cut(s)	547
PvuII	CAGCTG	4 cut(s)	490, 668, 941, 1970
RsaI	GTAC	4 cut(s)	820, 1151, 1830, 1995
RsaNI	GTAC	4 cut(s)	819, 1150, 1829, 1994
RseI	CAYNNNNRTG	4 cut(s)	363, 1214, 1632, 2100
SapI	GCTCTTC	1 cut(s)	439
SaqAI	TTAA	4 cut(s)	135, 167, 1848, 2223
SatI	GCNGC	5 cut(s)	267, 939, 1248, 1355, 1638
Sau3AI	GATC	7 cut(s)	355, 412, 472, 547, 553, 1985, 2392
Sau96I	GGNCC	8 cut(s)	24, 755, 1094, 1115, 1157, 1301, 1973, 2317
SchI	GAGTC	6 cut(s)	93, 412, 457, 1812, 2020, 2408
SduI	GDGCHC	2 cut(s)	321, 1733
SfaNI	GCATC	5 cut(s)	239, 415, 925, 2192, 2360
SfcI	CTRYAG	1 cut(s)	1581
SinI	GGWCC	4 cut(s)	1094, 1115, 1157, 1973
SmiMI	CAYNNNNRTG	4 cut(s)	363, 1214, 1632, 2100
SmlI	CTYRAG	5 cut(s)	85, 134, 420, 1026, 1668
SmoI	CTYRAG	5 cut(s)	85, 134, 420, 1026, 1668
SpeI	ACTAGT	1 cut(s)	961
SseBI	AGGCCT	1 cut(s)	1231
SsiI	CCGC	4 cut(s)	616, 1133, 1746, 1901
SspI	AATATT	1 cut(s)	736
SspMI	CTAG	5 cut(s)	962, 1035, 1809, 2118, 2187
StuI	AGGCCT	1 cut(s)	1231
StyI	CCWWGG	2 cut(s)	1090, 2267
TaaI	ACNGT	5 cut(s)	94, 700, 1924, 2300, 2331
TaiI	ACGT	3 cut(s)	227, 531, 2195
TaqI	TCGA	5 cut(s)	97, 219, 954, 1277, 1480
TaqII	GACCGA	1 cut(s)	1111
TfiI	GAWTC	4 cut(s)	646, 805, 1195, 1514
Tru1I	TTAA	4 cut(s)	135, 167, 1848, 2223
Tru9I	TTAA	4 cut(s)	135, 167, 1848, 2223
TscAI	CASTG	4 cut(s)	318, 358, 1350, 1860
TseFI	GTSAC	3 cut(s)	964, 2069, 2193
TseI	GCWGC	5 cut(s)	266, 938, 1247, 1354, 1637
Tsp45I	GTSAC	3 cut(s)	964, 2069, 2193
TspDTI	ATGAA	9 cut(s)	22, 42, 732, 893, 903, 1208, 1232, 1422, 2323
TspRI	CASTG	4 cut(s)	318, 358, 1350, 1860
Van91I	CCANNNNNTGG	2 cut(s)	1871, 2066
Vha464I	CTTAAG	1 cut(s)	134
VpaK11BI	GGWCC	4 cut(s)	1094, 1115, 1157, 1973
XagI	CCTNNNNNAGG	3 cut(s)	1038, 1737, 2034
XapI	RAATTY	4 cut(s)	1219, 1834, 2122, 2289
XbaI	TCTAGA	1 cut(s)	2186
XceI	RCATGY	1 cut(s)	1139
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1006, 1063
XmiI	GTMKAC	1 cut(s)	1086
XspI	CTAG	5 cut(s)	962, 1035, 1809, 2118, 2187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.