Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003736

Physical Location & Seq

Genomic Coordinates Reverse (-)

85253445 .. 85257389

Gene Structure 3945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G049170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGAGTGCAAAGGTCGATATGTCTGCATCGGGAACTGGTGGCCAAAAGGTCTCCAAGTTTGCTGCTAAGTCTGGATTTGTTATACCAAAAAACAAGTTATCAGGTTCACTCGTGCCCATCTTCCGGGGAGACAAAAATGTTGGAGTCAGTGATCATGGTGGTGGAGAAAGTAAGAAACAGGTTCAGAGGAAAACGAAATGGGGTGCTGATCTGACTCAAGATGCTTCTGTTAGAAAGGGAAGAGCATTAGCTTATCAGACTCGGGTGGATCAAATTACACAACAGCTGAAATCTGGAATATCAGAGTTTGGAAACAATGAGAACGTGCCATCACCATCTCAGGATCCAGACCACGTATCCTCTACATATCAAGTTGACAAGGAGGGTGCAGAACAATTGGAACTGGAAAAGCGGGAAGCCATAGGTGAAATACTAAAGTTGAATCCAAATTACAAGGCTCCAGCTGATTATAAACCTTTGTTGAAAGAGGCAACAGTTGCTATTCCTGTCAATGAATACCCAACATACAATATTCTTGGTCTGATATATGGGCCTGGAGGTGATAATCAGAAGCAATTAGAAAAGGAAACAGGAGCTAAGATTCAAGTCTATGGGACCAAAGCAGAGACGGGAGAGAAGGCTGAAATAAAACAATATGCTGGGAGTGAAATCCAGGCTGAATATGAAAAGTTATATGTTCATGTATCAGCTGACACATTTGAGAAAGTAGATGCAGCTGTTGCTGTAATCGAACTACTAGTCACCTCTGTATCTGGAAATCTGTCGGCCGTTGCCAAAACAGCTTTGGGTGATAATAATGCTCAAGTTCCTAGTCAAGGCCAGGACAGTACCACCTCAGATATGGTTCCAACTACTATGGTAAACCAAGGACCGGTGCAACCAGCGACAGGACCTACACAAACTCCACCGCATGTGCAGTTTCAGTACCCTGGTCCATTTTTCTCCACAGGCCAACCTGGCAGTCCAATGAATCTACCGGGCTTCACACCAATGAATTCTCAAAGGCCTATTCTCAACAGTGCTGCCCATCCATCAACATCACCTTTCAACTTGACAAACCTGCCGTCATTATTTGGGCCTCCACCAGCTCTTTTTCCCCAGACACAACACCTACCACCAGCGGTTTTGCAGCATACATATATGCCTCAGACCAGTCCTGGTTCTCTTGGCACACCAAGAGACTTCTCTATGATGGCTTCCCAGCCTTCATCAGTTCAAACTAATGTTTCAGCTCCAGTTACATTCTTGGGAAATCGACCCCCAACAGGCCAAAGTAATCATCCCCTTGAATCAATACCTGACTGGCAACTGACACCTGCTGGAAGCTCTGCTGGATGGAGCAGACCACCGACATCTGCGGGTTTCAGTAATAATATGCACATGGCACCTAATCCTCTAAATCATCTCAATGCAGCTCCAACTTTTACTGCTGTGCCACAACCTCAAATTGGCCTTCCTTCTACTTTACCAATGCCAGCACTTGCTCAACCCAAACCATATATGAGCCCTATGTCAGGTTCTGCTCCAGCTCCTTCACCTGGTGTAGTTACATCTTTACATCCACCTCAGCCACCAAGAGTCCCTAGTTCTGTTTCGGGAAATGTACCAAATTTCAGTCCTATAAAACCACTGACAACTCCAAGTCCTGGTGATTTCACTTTCCAGCCTCACCGACCGCAAAATCCAGCCTTTCAAACAGTTCCCCAACAAAGCAATCAGTTTTCAGTTCACAATGCTCACCCAGCTGGACCAATGGTGCGACCACAGGTACCATCTTTGCAGTTGCCTGTGCGACATATGACTCCTCAGCCAGGCAATCAGGTGTTATCAAGGCCACAGGTTGGTGACCAGATGAGTCAACCTTCAGCTCATATAAATGCTGTCCAGTTTGCTAGAAATTCAACTGCCATTTCAGTTCCTCCCAGACTTGCAACATTTCTGGACATCAATCCTGTTGCACCTAGAACGTCACTCCTGCCAATGAGACAGGGGAACTTTAATCAAGCTCACCAAATGCCCAATTTGCCCAGTCCTTTGCCTCCAAGGCCACGAGGTCATATTCAAATTCAGCACAGTTATCCTGCTCAATTGGCCCCAAATCAACAGTTCATCAACAATCCATTTGCATCTGGTAAGTCGTCTAATGCTGGAGGACACCAACTTTATGATCCATTCTCGCCCACTTCTGACTCAACAGCAAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 SF1-HH

Protein Analysis

742

Amino Acids

79.25

Weight (kDa)

9.31

Isoelectric Point (pI)

53.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	57 - 158	5.9e-08	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	172 - 254	6.9e-14	KHDC4/BBP-like, KH-domain type I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G32940
fragaria_vesca	FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840 FvH4_3g44840
malus_domestica	MD03G1008800.v1.1 MD03G1008900.v1.1 MD03G1009300.v1.1 MD03G1009900.v1.1 MD03G1010000.v1.1 MD03G1010200.v1.1
prunus_persica	Prupe.6G010100_v2.0.a1
pyrus_communis	pycom03g00890 pycom03g00910 pycom11g00730 pycom11g00740 pycom11g00780
rosa_chinensis	RchiOBHm_Chr5g0081541
rosa_laevigata	RLG00000036946
rosa_multiflora	Rmu_co8214750.1_g000001 Rmu_co8505191.1_g000001 Rmu_sc0028842.1_g000001 Rmu_sc0038011.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002010
rosa_rugosa	Rorug05G0477200
rosa_samantha	Rh5AG528500 Rh5BG553300 Rh5CG576100 Rh5DG563400
rosa_wichuraiana	Rw5G049170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	471
AarI	CACCTGC	1 cut(s)	1345
Acc36I	ACCTGC	2 cut(s)	1089, 1345
Acc65I	GGTACC	1 cut(s)	1789
AccB1I	GGYRCC	2 cut(s)	1405, 1789
AccB7I	CCANNNNNTGG	2 cut(s)	1667, 1862
AciI	CCGC	5 cut(s)	412, 929, 1142, 1379, 1697
AclWI	GGATC	4 cut(s)	276, 338, 351, 2183
AcoI	YGGCCR	2 cut(s)	40, 786
AcsI	RAATTY	4 cut(s)	1015, 1630, 1918, 2085
AcuI	CTGAAG	1 cut(s)	1869
AdeI	CACNNNGTG	1 cut(s)	1562
AfaI	GTAC	4 cut(s)	850, 947, 1626, 1791
AgeI	ACCGGT	1 cut(s)	892
AgsI	TTSAA	9 cut(s)	442, 484, 605, 1069, 1238, 1310, 1715, 1923, 2084
AhlI	ACTAGT	1 cut(s)	757
AjnI	CCWGG	9 cut(s)	553, 672, 840, 949, 976, 1177, 1558, 1666, 1831
Alw26I	GTCTC	5 cut(s)	55, 123, 620, 1194, 1999
AlwI	GGATC	4 cut(s)	276, 338, 351, 2183
AlwNI	CAGNNNCTG	1 cut(s)	1541
Ama87I	CYCGRG	1 cut(s)	261
ApeKI	GCWGC	5 cut(s)	62, 734, 1043, 1150, 1433
ApoI	RAATTY	4 cut(s)	1015, 1630, 1918, 2085
ArsI	GACNNNNNNTTYG	4 cut(s)	744, 776, 1070, 1102
AsiGI	ACCGGT	1 cut(s)	892
Asp718I	GGTACC	1 cut(s)	1789
AspS9I	GGNCC	8 cut(s)	551, 615, 890, 911, 953, 1097, 1769, 2113
AsuC2I	CCSGG	2 cut(s)	125, 999
AvaI	CYCGRG	1 cut(s)	261
AvaII	GGWCC	5 cut(s)	615, 890, 911, 953, 1769
BaeGI	GKGCMC	1 cut(s)	117
BaeI	ACNNNNGTAYC	2 cut(s)	753, 786
BalI	TGGCCA	1 cut(s)	42
BamHI	GGATCC	1 cut(s)	343
BanI	GGYRCC	2 cut(s)	1405, 1789
BanII	GRGCYC	1 cut(s)	1529
BauI	CACGAG	2 cut(s)	110, 2070
BbvCI	CCTCAGC	2 cut(s)	1587, 1827
BbvI	GCAGC	5 cut(s)	49, 746, 1030, 1162, 1445
BccI	CCATC	8 cut(s)	125, 337, 343, 1056, 1060, 1207, 1350, 1801
BceAI	ACGGC	2 cut(s)	773, 1069
BcgI	CGANNNNNNTGC	2 cut(s)	5, 39
BciT130I	CCWGG	9 cut(s)	555, 674, 842, 951, 978, 1179, 1560, 1668, 1833
BciVI	GTATCC	1 cut(s)	367
BclI	TGATCA	1 cut(s)	151
BcnI	CCSGG	2 cut(s)	125, 999
BcoDI	GTCTC	5 cut(s)	55, 123, 620, 1194, 1999
BcuI	ACTAGT	1 cut(s)	757
BfaI	CTAG	5 cut(s)	758, 831, 1605, 1914, 1983
BfuAI	ACCTGC	2 cut(s)	1089, 1345
BfuI	GTATCC	1 cut(s)	367
BglI	GCCNNNNNGGC	2 cut(s)	978, 2065
BisI	GCNGC	5 cut(s)	63, 735, 1044, 1151, 1434
BlsI	GCNGC	5 cut(s)	64, 736, 1045, 1152, 1435
Bme18I	GGWCC	5 cut(s)	615, 890, 911, 953, 1769
BmeT110I	CYCGRG	1 cut(s)	261
BmgT120I	GGNCC	8 cut(s)	551, 615, 890, 911, 953, 1097, 1769, 2113
BmiI	GGNNCC	7 cut(s)	345, 459, 616, 867, 1407, 1791, 2115
BmrI	ACTGGG	1 cut(s)	2043
BmsI	GCATC	4 cut(s)	35, 211, 721, 2156
BmuI	ACTGGG	1 cut(s)	2043
BpmI	CTGGAG	5 cut(s)	444, 576, 1239, 1530, 2190
Bpu10I	CCTNAGC	2 cut(s)	1587, 1827
BpuEI	CTTGAG	2 cut(s)	201, 807
BpuMI	CCSGG	2 cut(s)	125, 999
BsaAI	YACGTR	1 cut(s)	355
BsaI	GGTCTC	1 cut(s)	55
BsaJI	CCNNGG	4 cut(s)	124, 886, 949, 2063
BsaWI	WCCGGW	1 cut(s)	892
BsaXI	ACNNNNNCTCC	2 cut(s)	907, 937
Bse118I	RCCGGY	1 cut(s)	892
Bse1I	ACTGG	7 cut(s)	40, 408, 1173, 1256, 1328, 1906, 2049
BseBI	CCWGG	9 cut(s)	555, 674, 842, 951, 978, 1179, 1560, 1668, 1833
BseDI	CCNNGG	4 cut(s)	124, 886, 949, 2063
BseGI	GGATG	4 cut(s)	1048, 1300, 1361, 1579
BseMII	CTCAG	5 cut(s)	353, 870, 1181, 1601, 1841
BseNI	ACTGG	7 cut(s)	40, 408, 1173, 1256, 1328, 1906, 2049
BseRI	GAGGAG	1 cut(s)	1815
BseSI	GKGCMC	1 cut(s)	117
BseX3I	CGGCCG	1 cut(s)	786
BseXI	GCAGC	5 cut(s)	49, 746, 1030, 1162, 1445
BseYI	CCCAGC	3 cut(s)	659, 1221, 1762
BsgI	GTGCAG	2 cut(s)	408, 956
Bsh1285I	CGRYCG	2 cut(s)	789, 1697
BshNI	GGYRCC	2 cut(s)	1405, 1789
BshTI	ACCGGT	1 cut(s)	892
BsiEI	CGRYCG	2 cut(s)	789, 1697
BsiHKCI	CYCGRG	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	124, 893, 998
BslFI	GGGAC	2 cut(s)	628, 1586
BsmAI	GTCTC	5 cut(s)	55, 123, 620, 1194, 1999
BsmBI	CGTCTC	1 cut(s)	620
BsmFI	GGGAC	2 cut(s)	628, 1586
Bso31I	GGTCTC	1 cut(s)	55
BsoBI	CYCGRG	1 cut(s)	261
Bsp1286I	GDGCHC	2 cut(s)	117, 1529
Bsp143I	GATC	5 cut(s)	151, 208, 268, 343, 2188
BspACI	CCGC	5 cut(s)	412, 929, 1142, 1379, 1697
BspCNI	CTCAG	5 cut(s)	352, 869, 1180, 1600, 1840
BspLI	GGNNCC	7 cut(s)	345, 459, 616, 867, 1407, 1791, 2115
BspMI	ACCTGC	2 cut(s)	1089, 1345
BspPI	GGATC	4 cut(s)	276, 338, 351, 2183
BspQI	GCTCTTC	1 cut(s)	235
BspT107I	GGYRCC	2 cut(s)	1405, 1789
BspTNI	GGTCTC	1 cut(s)	55
BsrFI	RCCGGY	1 cut(s)	892
BsrI	ACTGG	7 cut(s)	40, 408, 1173, 1256, 1328, 1906, 2049
BssAI	RCCGGY	1 cut(s)	892
BssECI	CCNNGG	4 cut(s)	124, 886, 949, 2063
BssMI	GATC	5 cut(s)	151, 208, 268, 343, 2188
BssSI	CACGAG	2 cut(s)	110, 2070
BssT1I	CCWWGG	2 cut(s)	886, 2063
Bst2BI	CACGAG	2 cut(s)	110, 2070
Bst2UI	CCWGG	9 cut(s)	555, 674, 842, 951, 978, 1179, 1560, 1668, 1833
Bst4CI	ACNGT	6 cut(s)	496, 848, 1040, 1720, 2096, 2127
Bst6I	CTCTTC	1 cut(s)	235
BstAPI	GCANNNNNTGC	2 cut(s)	497, 740
BstBAI	YACGTR	1 cut(s)	355
BstC8I	GCNNGC	1 cut(s)	1497
BstDEI	CTNAG	7 cut(s)	66, 339, 597, 856, 1167, 1587, 1827
BstEII	GGTNACC	1 cut(s)	1865
BstENI	CCTNNNNNAGG	3 cut(s)	834, 1533, 1830
BstF5I	GGATG	4 cut(s)	1048, 1300, 1361, 1579
BstKTI	GATC	5 cut(s)	154, 211, 271, 346, 2191
BstMAI	GTCTC	5 cut(s)	55, 123, 620, 1194, 1999
BstMBI	GATC	5 cut(s)	151, 208, 268, 343, 2188
BstMCI	CGRYCG	2 cut(s)	789, 1697
BstMWI	GCNNNNNNNGC	8 cut(s)	497, 740, 800, 978, 1763, 2044, 2065, 2111
BstNI	CCWGG	9 cut(s)	555, 674, 842, 951, 978, 1179, 1560, 1668, 1833
BstNSI	RCATGY	1 cut(s)	935
BstPI	GGTNACC	1 cut(s)	1865
BstSLI	GKGCMC	1 cut(s)	117
BstV1I	GCAGC	5 cut(s)	49, 746, 1030, 1162, 1445
BstX2I	RGATCY	1 cut(s)	343
BstYI	RGATCY	1 cut(s)	343
BstZI	CGGCCG	1 cut(s)	786
BsuI	GTATCC	1 cut(s)	367
BtsCI	GGATG	4 cut(s)	1048, 1300, 1361, 1579
BtsIMutI	CAGTG	3 cut(s)	154, 1045, 1649
BveI	ACCTGC	2 cut(s)	1089, 1345
Cac8I	GCNNGC	1 cut(s)	1497
CaiI	CAGNNNCTG	1 cut(s)	1541
Cfr10I	RCCGGY	1 cut(s)	892
Cfr13I	GGNCC	8 cut(s)	551, 615, 890, 911, 953, 1097, 1769, 2113
CsiI	ACCWGGT	1 cut(s)	1558
Csp6I	GTAC	4 cut(s)	849, 946, 1625, 1790
CspAI	ACCGGT	1 cut(s)	892
CviAII	CATG	4 cut(s)	155, 701, 932, 1402
CviQI	GTAC	4 cut(s)	849, 946, 1625, 1790
DdeI	CTNAG	7 cut(s)	66, 339, 597, 856, 1167, 1587, 1827
DpnI	GATC	5 cut(s)	153, 210, 270, 345, 2190
DpnII	GATC	5 cut(s)	151, 208, 268, 343, 2188
DraIII	CACNNNGTG	1 cut(s)	1562
EaeI	YGGCCR	2 cut(s)	40, 786
EagI	CGGCCG	1 cut(s)	786
Eam1104I	CTCTTC	1 cut(s)	235
EarI	CTCTTC	1 cut(s)	235
EclXI	CGGCCG	1 cut(s)	786
Eco130I	CCWWGG	2 cut(s)	886, 2063
Eco147I	AGGCCT	1 cut(s)	1027
Eco24I	GRGCYC	1 cut(s)	1529
Eco31I	GGTCTC	1 cut(s)	55
Eco47I	GGWCC	5 cut(s)	615, 890, 911, 953, 1769
Eco52I	CGGCCG	1 cut(s)	786
Eco57I	CTGAAG	1 cut(s)	1869
Eco88I	CYCGRG	1 cut(s)	261
Eco91I	GGTNACC	1 cut(s)	1865
EcoNI	CCTNNNNNAGG	3 cut(s)	834, 1533, 1830
EcoO109I	RGGNCCY	1 cut(s)	911
EcoO65I	GGTNACC	1 cut(s)	1865
EcoRI	GAATTC	1 cut(s)	1015
EcoRII	CCWGG	9 cut(s)	553, 672, 840, 949, 976, 1177, 1558, 1666, 1831
EcoT14I	CCWWGG	2 cut(s)	886, 2063
EcoT38I	GRGCYC	1 cut(s)	1529
ErhI	CCWWGG	2 cut(s)	886, 2063
Esp3I	CGTCTC	1 cut(s)	620
FaeI	CATG	4 cut(s)	158, 704, 935, 1405
FaqI	GGGAC	2 cut(s)	628, 1586
FatI	CATG	4 cut(s)	154, 700, 931, 1401
FauI	CCCGC	2 cut(s)	405, 1372
FauNDI	CATATG	1 cut(s)	1818
FbaI	TGATCA	1 cut(s)	151
Fnu4HI	GCNGC	5 cut(s)	63, 735, 1044, 1151, 1434
FokI	GGATG	4 cut(s)	1035, 1287, 1368, 1566
FriOI	GRGCYC	1 cut(s)	1529
Fsp4HI	GCNGC	5 cut(s)	63, 735, 1044, 1151, 1434
FspBI	CTAG	5 cut(s)	758, 831, 1605, 1914, 1983
GluI	GCNGC	5 cut(s)	63, 735, 1044, 1151, 1434
GsaI	CCCAGC	3 cut(s)	663, 1225, 1766
GsuI	CTGGAG	5 cut(s)	444, 576, 1239, 1530, 2190
HapII	CCGG	3 cut(s)	124, 893, 998
Hin1II	CATG	4 cut(s)	158, 704, 935, 1405
HincII	GTYRAC	2 cut(s)	376, 1880
HindII	GTYRAC	2 cut(s)	376, 1880
HpaII	CCGG	3 cut(s)	124, 893, 998
Hpy166II	GTNNAC	5 cut(s)	107, 376, 883, 1750, 1880
Hpy188I	TCNGA	9 cut(s)	186, 213, 258, 304, 543, 570, 859, 1170, 2209
Hpy188III	TCNNGA	9 cut(s)	30, 72, 218, 294, 341, 347, 774, 1617, 1961
Hpy8I	GTNNAC	5 cut(s)	107, 376, 883, 1750, 1880
HpyAV	CCTTC	6 cut(s)	631, 1236, 1484, 1488, 1563, 1893
HpyCH4III	ACNGT	6 cut(s)	496, 848, 1040, 1720, 2096, 2127
HpyCH4IV	ACGT	3 cut(s)	324, 354, 1988
HpyF10VI	GCNNNNNNNGC	8 cut(s)	497, 740, 800, 978, 1763, 2044, 2065, 2111
HpyF3I	CTNAG	7 cut(s)	66, 339, 597, 856, 1167, 1587, 1827
HpySE526I	ACGT	3 cut(s)	324, 354, 1988
Hsp92II	CATG	4 cut(s)	158, 704, 935, 1405
KpnI	GGTACC	1 cut(s)	1793
Ksp22I	TGATCA	1 cut(s)	151
Kzo9I	GATC	5 cut(s)	151, 208, 268, 343, 2188
LguI	GCTCTTC	1 cut(s)	235
LmnI	GCTCC	7 cut(s)	463, 593, 1258, 1359, 1441, 1549, 1555
Lsp1109I	GCAGC	5 cut(s)	49, 746, 1030, 1162, 1445
LweI	GCATC	4 cut(s)	35, 211, 721, 2156
MabI	ACCWGGT	1 cut(s)	1558
MaeI	CTAG	5 cut(s)	758, 831, 1605, 1914, 1983
MaeII	ACGT	3 cut(s)	324, 354, 1988
MaeIII	GTNAC	5 cut(s)	760, 1258, 1567, 1865, 1989
MalI	GATC	5 cut(s)	153, 210, 270, 345, 2190
MboI	GATC	5 cut(s)	151, 208, 268, 343, 2188
MboII	GAAGA	2 cut(s)	112, 252
MfeI	CAATTG	2 cut(s)	395, 2108
MflI	RGATCY	1 cut(s)	343
MhlI	GDGCHC	2 cut(s)	117, 1529
MlsI	TGGCCA	1 cut(s)	42
MluNI	TGGCCA	1 cut(s)	42
MlyI	GAGTC	7 cut(s)	153, 208, 253, 1608, 1816, 1885, 2204
MmeI	TCCRAC	3 cut(s)	121, 893, 1463
Mox20I	TGGCCA	1 cut(s)	42
MscI	TGGCCA	1 cut(s)	42
MseI	TTAA	1 cut(s)	2019
MslI	CAYNNNNRTG	4 cut(s)	159, 1010, 1428, 1896
Msp20I	TGGCCA	1 cut(s)	42
MspA1I	CMGCKG	6 cut(s)	286, 464, 710, 737, 1142, 1766
MspI	CCGG	3 cut(s)	124, 893, 998
MunI	CAATTG	2 cut(s)	395, 2108
MvaI	CCWGG	9 cut(s)	555, 674, 842, 951, 978, 1179, 1560, 1668, 1833
MwoI	GCNNNNNNNGC	8 cut(s)	497, 740, 800, 978, 1763, 2044, 2065, 2111
NciI	CCSGG	2 cut(s)	125, 999
NdeI	CATATG	1 cut(s)	1818
NdeII	GATC	5 cut(s)	151, 208, 268, 343, 2188
NlaIII	CATG	4 cut(s)	158, 704, 935, 1405
NlaIV	GGNNCC	7 cut(s)	345, 459, 616, 867, 1407, 1791, 2115
NmuCI	GTSAC	3 cut(s)	760, 1865, 1989
NspI	RCATGY	1 cut(s)	935
PaqCI	CACCTGC	1 cut(s)	1345
PceI	AGGCCT	1 cut(s)	1027
PciSI	GCTCTTC	1 cut(s)	235
PfeI	GAWTC	4 cut(s)	442, 601, 991, 1310
PflMI	CCANNNNNTGG	2 cut(s)	1667, 1862
PinAI	ACCGGT	1 cut(s)	892
PkrI	GCNGC	5 cut(s)	64, 736, 1045, 1152, 1435
PleI	GAGTC	7 cut(s)	152, 208, 253, 1607, 1816, 1884, 2204
PpsI	GAGTC	7 cut(s)	152, 208, 253, 1607, 1816, 1884, 2204
Ppu21I	YACGTR	1 cut(s)	355
PpuMI	RGGWCCY	1 cut(s)	911
PsiI	TTATAA	1 cut(s)	471
Psp5II	RGGWCCY	1 cut(s)	911
Psp6I	CCWGG	9 cut(s)	553, 672, 840, 949, 976, 1177, 1558, 1666, 1831
PspEI	GGTNACC	1 cut(s)	1865
PspFI	CCCAGC	3 cut(s)	659, 1221, 1762
PspGI	CCWGG	9 cut(s)	553, 672, 840, 949, 976, 1177, 1558, 1666, 1831
PspN4I	GGNNCC	7 cut(s)	345, 459, 616, 867, 1407, 1791, 2115
PspPI	GGNCC	8 cut(s)	551, 615, 890, 911, 953, 1097, 1769, 2113
PspPPI	RGGWCCY	1 cut(s)	911
PstNI	CAGNNNCTG	1 cut(s)	1541
PsuI	RGATCY	1 cut(s)	343
PvuII	CAGCTG	5 cut(s)	286, 464, 710, 737, 1766
RsaI	GTAC	4 cut(s)	850, 947, 1626, 1791
RsaNI	GTAC	4 cut(s)	849, 946, 1625, 1790
RseI	CAYNNNNRTG	4 cut(s)	159, 1010, 1428, 1896
SapI	GCTCTTC	1 cut(s)	235
SaqAI	TTAA	1 cut(s)	2019
SatI	GCNGC	5 cut(s)	63, 735, 1044, 1151, 1434
Sau3AI	GATC	5 cut(s)	151, 208, 268, 343, 2188
Sau96I	GGNCC	8 cut(s)	551, 615, 890, 911, 953, 1097, 1769, 2113
SchI	GAGTC	7 cut(s)	153, 208, 253, 1608, 1816, 1885, 2204
SduI	GDGCHC	2 cut(s)	117, 1529
SexAI	ACCWGGT	1 cut(s)	1558
SfaNI	GCATC	4 cut(s)	35, 211, 721, 2156
SinI	GGWCC	5 cut(s)	615, 890, 911, 953, 1769
SmiMI	CAYNNNNRTG	4 cut(s)	159, 1010, 1428, 1896
SmlI	CTYRAG	2 cut(s)	216, 822
SmoI	CTYRAG	2 cut(s)	216, 822
SpeI	ACTAGT	1 cut(s)	757
SseBI	AGGCCT	1 cut(s)	1027
SsiI	CCGC	5 cut(s)	412, 929, 1142, 1379, 1697
SspI	AATATT	1 cut(s)	532
SspMI	CTAG	5 cut(s)	758, 831, 1605, 1914, 1983
StuI	AGGCCT	1 cut(s)	1027
StyI	CCWWGG	2 cut(s)	886, 2063
TaaI	ACNGT	6 cut(s)	496, 848, 1040, 1720, 2096, 2127
TaiI	ACGT	3 cut(s)	327, 357, 1991
TaqI	TCGA	3 cut(s)	15, 750, 1276
TfiI	GAWTC	4 cut(s)	442, 601, 991, 1310
Tru1I	TTAA	1 cut(s)	2019
Tru9I	TTAA	1 cut(s)	2019
TscAI	CASTG	3 cut(s)	154, 1045, 1656
TseFI	GTSAC	3 cut(s)	760, 1865, 1989
TseI	GCWGC	5 cut(s)	62, 734, 1043, 1150, 1433
Tsp45I	GTSAC	3 cut(s)	760, 1865, 1989
TspDTI	ATGAA	7 cut(s)	528, 689, 699, 1004, 1028, 1218, 2119
TspRI	CASTG	3 cut(s)	154, 1045, 1656
Van91I	CCANNNNNTGG	2 cut(s)	1667, 1862
VpaK11BI	GGWCC	5 cut(s)	615, 890, 911, 953, 1769
XagI	CCTNNNNNAGG	3 cut(s)	834, 1533, 1830
XapI	RAATTY	4 cut(s)	1015, 1630, 1918, 2085
XceI	RCATGY	1 cut(s)	935
XcmI	CCANNNNNNNNNTGG	2 cut(s)	802, 859
XspI	CTAG	5 cut(s)	758, 831, 1605, 1914, 1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.