MD03G1009900.v1.1

K homology RNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0003736
Physical Location & Seq
Forward (+)
758924 .. 763802
4879 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1009900.v1.1.491

Sequence Viewer

Length: 2115 bp
ATGTCTGGTACAACGATGACACCTGCATCATCAGCTGGTACACAAAAGGTCTCCATGTTTGCTGCCAAGGCTGGGTTTGTTATACCGAAAAACAAGCTGTCGGGTTCACTTGTGCCTGTCTTTCGCGGAAGTAAAAACCTAGGAGCCGGTGATGCAGGTAGTGGAGAAAGTAAGAAACAGATTCAGAGGAAAACAAAATGGGGTCCTGATCTCACCCAAGATGCTTCTGTCAAAAAGGGAAGATCTTTAGCTTATCAGACTCGGGTGGATCAAATTACACAACAGCTGAAATCTGGAATGTTAGAGGATGAGAATGATGAGATTGAGGACTTACTATCAGCACCTCAAGATCTGCACCACAAATCCTCTAAGCATCAAATTGATACAAAGGATGTCGACCAGTTGGAACTTGAAAAGCGGGAAGCCATAGGTGAGATATTAAAGTTAAATCCAAGCTACAAGGCCCCACCTGATTATATACCTTTGTTGAAAGAGGCTACAGTCCCTATTCCTGTGAAAGAATATCCTAAATACAATTTTGTTGGCCTGATATATGGTCCTGGAAGTGATAACCAGAAACAATTAGAAAAGGAAACCGGAGCCAAGATTCAAGTCTATGGTACCAAAGCAGGGACAGGACAGAAGGCTGAAATAAAACCATCTGATGGGAGTGAAATCCATGGTGAATATGAAAACTTATATGTTCATATATCAGCTGACACATTTGAGAAAGTAGATGCAGCGGTTGCTGTGATTGAGCTCTTAGTCACCTCTGTATCAGGCAATCTGGCAGCGGTTAGCAGTACAGGTGCTTCAGTTTCTGCTGATAATGCTCATGTTCCTAATCAAGTCCAGGACACTACCACCTCTAATATGGTTCCAACTACTGTGGTAAATCAGGGAATGGTACAACCACTGCCAGGACTGGCACAAACTCCACTGGATGGGCAGTTTCAGTACCGTGGTCCATTTCTCTCGAGGGGCCCATCTTCCACTCCCATGTATATGCCTGGCTTCACTCCTCTGAATTCTTCGAGACCAAACCTCAACAATCCTTCCCATCTTTCAACATCACCTTTCAACCCTGCGTACCTGCCTTCATCATTTGGGCTTCCGCCATCTCTTGTTTCCCCTAGACAAAATCCACCAACAACACAATTTTTGCCGCATACATATATGGCTCCCCAGCCTGCATCAGTGCAAACTAATGTTTCAGCTCCTCTCACATTCATGGGAAACCGACCACTGCCTGCTGGGAGCTCTACTGGATGGTCAAGCGGTCCACCAGCTCCACAACCAGGTGTTGCGTCCATGCCACCACCTTCAAATATACCAACGGGGAATATGGTATCTTCTGTAAACCATCCTATTGCAGCACCAAGTTCTATTTTTATTCCACTGCCTCAAGCAGGACTTCCTTCTACATCTCTGCAAGCAAGAGTTCCAAGTTCTGTTTCTGGAAGTGTTCCAAATATTGCTCCCCTAAAACCACCAATGATGACGGCTCAAAGCCCTGGCGATTTCACTTTTCAGCCGCATCGACCACAGAATCCATCCTTCCAAACAGTTCCCCAACCAAGCAGTCACTTTTCAGCCCATAACGCTTCTCTTGCCAGACCAATGTTGCCGTCTCCAGCACCTCAAGCACCGTCTTTCCAGTTTCCTCAGCCAGGCAGTCAGGTGTTATCGAGACCACAACTCGGTGACCACATGGGTCAGCATCCATCAGCTCATATGTCTGCTGCTCCCTATGCCAGAAATTCAACTGCCACCTCAGTTCCTCCCAGACTTGCAACATTTCTAGAATCCAGTACCGTTCTACCTCAGACGCCACACCCACCAATGAGACCGAGTAACTTCAATCCACCTCACCGGATGCCCAATTTGCCAGGTCCTCTGCCTCCAAGGCCAGGAAATTACATTCAAATTCAGCAAAGCTATCCTGCTCACGCAACTAGACCTGAGATCCCACGTGCTCCAAATCAACAGTTCAACAACCTTGCATTTTCCTCTGGCAAGTCGGCATCTGGTCCTGGAGGAGGACAGCAACTTTATGATCCATTCTCACCCACTTCCGCGAATCAACAGCAGGGAGGTAATCCAGTAAAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1 SF1-HH

Protein Analysis

705

Amino Acids

74.82

Weight (kDa)

9.3

Isoelectric Point (pI)

53.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH-I_KHDC4-BBP PF22675 174 - 256 2.8e-14 KHDC4/BBP-like, KH-domain type I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
Acc36I ACCTGC 3 cut(s) 31, 146, 1101
Acc65I GGTACC 1 cut(s) 620
AccB1I GGYRCC 1 cut(s) 620
AccB7I CCANNNNNTGG 2 cut(s) 665, 944
AccI GTMKAC 1 cut(s) 396
AccII CGCG 2 cut(s) 126, 2078
AciI CCGC 9 cut(s) 126, 418, 743, 794, 1115, 1166, 1278, 1535, 2076
AclWI GGATC 3 cut(s) 276, 1960, 2051
AcsI RAATTY 3 cut(s) 1027, 1759, 1926
AcuI CTGAAG 1 cut(s) 798
AcvI CACGTG 1 cut(s) 1973
AcyI GRCGYC 1 cut(s) 1829
AfaI GTAC 8 cut(s) 10, 40, 622, 805, 909, 959, 1091, 1813
AjuI GAANNNNNNNTTGG 2 cut(s) 1438, 1470
Alw21I GWGCWC 3 cut(s) 762, 1262, 1978
Alw26I GTCTC 5 cut(s) 55, 1030, 1635, 1684, 1840
AlwI GGATC 3 cut(s) 276, 1960, 2051
AlwNI CAGNNNCTG 1 cut(s) 821
Ama87I CYCGRG 2 cut(s) 261, 976
AoxI GGCC 4 cut(s) 462, 544, 982, 1907
ApaI GGGCCC 1 cut(s) 986
ApeKI GCWGC 5 cut(s) 62, 740, 791, 1373, 1742
ApoI RAATTY 3 cut(s) 1027, 1759, 1926
Asp718I GGTACC 1 cut(s) 620
AspA2I CCTAGG 1 cut(s) 139
AspS9I GGNCC 9 cut(s) 203, 463, 557, 965, 982, 983, 1280, 1892, 2030
AsuHPI GGTGA 9 cut(s) 161, 205, 443, 695, 760, 1065, 1715, 1862, 2058
AvaI CYCGRG 2 cut(s) 261, 976
AvaII GGWCC 6 cut(s) 203, 557, 965, 1280, 1892, 2030
AvrII CCTAGG 1 cut(s) 139
BaeGI GKGCMC 1 cut(s) 986
BaeI ACNNNNGTAYC 2 cut(s) 759, 792
BanI GGYRCC 1 cut(s) 620
BanII GRGCYC 3 cut(s) 762, 986, 1262
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BbrPI CACGTG 1 cut(s) 1973
Bbv12I GWGCWC 3 cut(s) 762, 1262, 1978
BbvCI CCTCAGC 1 cut(s) 1665
BbvI GCAGC 5 cut(s) 49, 752, 803, 1385, 1729
BceAI ACGGC 2 cut(s) 1518, 1612
BcoDI GTCTC 5 cut(s) 55, 1030, 1635, 1684, 1840
BfaI CTAG 4 cut(s) 140, 1134, 1802, 1956
BfmI CTRYAG 1 cut(s) 498
BfuAI ACCTGC 3 cut(s) 31, 146, 1101
BglI GCCNNNNNGGC 1 cut(s) 1906
BglII AGATCT 2 cut(s) 242, 349
BisI GCNGC 7 cut(s) 63, 741, 792, 1166, 1374, 1535, 1743
BlnI CCTAGG 1 cut(s) 139
BlsI GCNGC 7 cut(s) 64, 742, 793, 1167, 1375, 1536, 1744
Bme18I GGWCC 6 cut(s) 203, 557, 965, 1280, 1892, 2030
BmeT110I CYCGRG 2 cut(s) 261, 976
BmgT120I GGNCC 9 cut(s) 203, 463, 557, 965, 982, 983, 1280, 1892, 2030
BmiI GGNNCC 9 cut(s) 145, 204, 465, 601, 622, 879, 983, 984, 1182
BpmI CTGGAG 2 cut(s) 1617, 2055
Bpu10I CCTNAGC 1 cut(s) 1665
BpuEI CTTGAG 3 cut(s) 330, 1389, 1626
BsaAI YACGTR 1 cut(s) 1973
BsaHI GRCGYC 1 cut(s) 1829
BsaI GGTCTC 4 cut(s) 55, 1030, 1684, 1840
BsaJI CCNNGG 6 cut(s) 66, 139, 679, 961, 1513, 1904
BsaWI WCCGGW 2 cut(s) 596, 1872
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 7 cut(s) 400, 930, 945, 1270, 1657, 1809, 2102
BseDI CCNNGG 6 cut(s) 66, 139, 679, 961, 1513, 1904
BseGI GGATG 8 cut(s) 313, 397, 949, 1274, 1363, 1553, 1720, 1881
BseMII CTCAG 4 cut(s) 1679, 1788, 1838, 1953
BseNI ACTGG 7 cut(s) 400, 930, 945, 1270, 1657, 1809, 2102
BseRI GAGGAG 3 cut(s) 1011, 1209, 2052
BseSI GKGCMC 1 cut(s) 986
BseXI GCAGC 5 cut(s) 49, 752, 803, 1385, 1729
BseYI CCCAGC 3 cut(s) 71, 1185, 1253
BsgI GTGCAG 1 cut(s) 338
Bsh1236I CGCG 2 cut(s) 126, 2078
BshFI GGCC 4 cut(s) 464, 546, 984, 1909
BshNI GGYRCC 1 cut(s) 620
BsiHKAI GWGCWC 3 cut(s) 762, 1262, 1978
BsiHKCI CYCGRG 2 cut(s) 261, 976
BsiSI CCGG 3 cut(s) 147, 597, 1873
BslFI GGGAC 2 cut(s) 488, 646
BsmAI GTCTC 5 cut(s) 55, 1030, 1635, 1684, 1840
BsmBI CGTCTC 1 cut(s) 1635
BsmFI GGGAC 2 cut(s) 488, 646
BsnI GGCC 4 cut(s) 464, 546, 984, 1909
Bso31I GGTCTC 4 cut(s) 55, 1030, 1684, 1840
BsoBI CYCGRG 2 cut(s) 261, 976
Bsp120I GGGCCC 1 cut(s) 982
Bsp1286I GDGCHC 4 cut(s) 762, 986, 1262, 1978
Bsp143I GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
Bsp19I CCATGG 1 cut(s) 679
BspACI CCGC 9 cut(s) 126, 418, 743, 794, 1115, 1166, 1278, 1535, 2076
BspANI GGCC 4 cut(s) 464, 546, 984, 1909
BspCNI CTCAG 4 cut(s) 1678, 1787, 1837, 1954
BspFNI CGCG 2 cut(s) 126, 2078
BspLI GGNNCC 9 cut(s) 145, 204, 465, 601, 622, 879, 983, 984, 1182
BspMI ACCTGC 3 cut(s) 31, 146, 1101
BspPI GGATC 3 cut(s) 276, 1960, 2051
BspT107I GGYRCC 1 cut(s) 620
BspTNI GGTCTC 4 cut(s) 55, 1030, 1684, 1840
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 7 cut(s) 400, 930, 945, 1270, 1657, 1809, 2102
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 6 cut(s) 66, 139, 679, 961, 1513, 1904
BssMI GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
BssNI GRCGYC 1 cut(s) 1829
BssT1I CCWWGG 4 cut(s) 66, 139, 679, 1904
Bst4CI ACNGT 7 cut(s) 502, 889, 962, 1567, 1650, 1816, 1989
BstACI GRCGYC 1 cut(s) 1829
BstAPI GCANNNNNTGC 1 cut(s) 746
BstBAI YACGTR 1 cut(s) 1973
BstC8I GCNNGC 3 cut(s) 1191, 1251, 1434
BstDEI CTNAG 6 cut(s) 369, 763, 1665, 1774, 1824, 1962
BstDSI CCRYGG 2 cut(s) 679, 961
BstEII GGTNACC 1 cut(s) 1703
BstENI CCTNNNNNAGG 3 cut(s) 1407, 1668, 2037
BstF5I GGATG 8 cut(s) 313, 397, 949, 1274, 1363, 1553, 1720, 1881
BstFNI CGCG 2 cut(s) 126, 2078
BstKTI GATC 6 cut(s) 211, 245, 271, 352, 1968, 2059
BstMAI GTCTC 5 cut(s) 55, 1030, 1635, 1684, 1840
BstMBI GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
BstPI GGTNACC 1 cut(s) 1703
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 1 cut(s) 986
BstUI CGCG 2 cut(s) 126, 2078
BstV1I GCAGC 5 cut(s) 49, 752, 803, 1385, 1729
BstX2I RGATCY 3 cut(s) 242, 349, 1965
BstYI RGATCY 3 cut(s) 242, 349, 1965
BsuRI GGCC 4 cut(s) 464, 546, 984, 1909
BtgI CCRYGG 2 cut(s) 679, 961
BtsCI GGATG 8 cut(s) 313, 397, 949, 1274, 1363, 1553, 1720, 1881
BtsI GCAGTG 3 cut(s) 914, 1244, 1397
BtsIMutI CAGTG 5 cut(s) 914, 938, 1203, 1244, 1397
BveI ACCTGC 3 cut(s) 31, 146, 1101
Cac8I GCNNGC 3 cut(s) 1191, 1251, 1434
CaiI CAGNNNCTG 1 cut(s) 821
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 9 cut(s) 203, 463, 557, 965, 982, 983, 1280, 1892, 2030
CseI GACGC 2 cut(s) 1296, 1837
CsiI ACCWGGT 1 cut(s) 1297
Csp6I GTAC 8 cut(s) 9, 39, 621, 804, 908, 958, 1090, 1812
CspCI CAANNNNNGTGG 2 cut(s) 870, 905
CviAII CATG 7 cut(s) 55, 680, 836, 1000, 1231, 1312, 1711
CviQI GTAC 8 cut(s) 9, 39, 621, 804, 908, 958, 1090, 1812
DdeI CTNAG 6 cut(s) 369, 763, 1665, 1774, 1824, 1962
DpnI GATC 6 cut(s) 210, 244, 270, 351, 1967, 2058
DpnII GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
EciI GGCGGA 1 cut(s) 1104
Ecl136II GAGCTC 2 cut(s) 760, 1260
Eco130I CCWWGG 4 cut(s) 66, 139, 679, 1904
Eco24I GRGCYC 3 cut(s) 762, 986, 1262
Eco31I GGTCTC 4 cut(s) 55, 1030, 1684, 1840
Eco47I GGWCC 6 cut(s) 203, 557, 965, 1280, 1892, 2030
Eco53kI GAGCTC 2 cut(s) 760, 1260
Eco57I CTGAAG 1 cut(s) 798
Eco72I CACGTG 1 cut(s) 1973
Eco88I CYCGRG 2 cut(s) 261, 976
Eco91I GGTNACC 1 cut(s) 1703
EcoICRI GAGCTC 2 cut(s) 760, 1260
EcoNI CCTNNNNNAGG 3 cut(s) 1407, 1668, 2037
EcoO109I RGGNCCY 4 cut(s) 203, 463, 982, 1892
EcoO65I GGTNACC 1 cut(s) 1703
EcoRI GAATTC 1 cut(s) 1027
EcoT14I CCWWGG 4 cut(s) 66, 139, 679, 1904
EcoT38I GRGCYC 3 cut(s) 762, 986, 1262
ErhI CCWWGG 4 cut(s) 66, 139, 679, 1904
Esp3I CGTCTC 1 cut(s) 1635
FaeI CATG 7 cut(s) 58, 683, 839, 1003, 1234, 1315, 1714
FalI AAGNNNNNCTT 2 cut(s) 1398, 1430
FaqI GGGAC 2 cut(s) 488, 646
FatI CATG 7 cut(s) 54, 679, 835, 999, 1230, 1311, 1710
FauI CCCGC 1 cut(s) 411
FauNDI CATATG 1 cut(s) 1734
FblI GTMKAC 1 cut(s) 396
Fnu4HI GCNGC 7 cut(s) 63, 741, 792, 1166, 1374, 1535, 1743
FokI GGATG 8 cut(s) 320, 404, 956, 1281, 1350, 1540, 1707, 1888
FriOI GRGCYC 3 cut(s) 762, 986, 1262
Fsp4HI GCNGC 7 cut(s) 63, 741, 792, 1166, 1374, 1535, 1743
FspBI CTAG 4 cut(s) 140, 1134, 1802, 1956
GluI GCNGC 7 cut(s) 63, 741, 792, 1166, 1374, 1535, 1743
GsaI CCCAGC 3 cut(s) 75, 1189, 1257
GsuI CTGGAG 2 cut(s) 1617, 2055
HaeIII GGCC 4 cut(s) 464, 546, 984, 1909
HapII CCGG 3 cut(s) 147, 597, 1873
HgaI GACGC 2 cut(s) 1296, 1837
Hin1I GRCGYC 1 cut(s) 1829
Hin1II CATG 7 cut(s) 58, 683, 839, 1003, 1234, 1315, 1714
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HinfI GANTC 6 cut(s) 181, 259, 607, 1549, 1805, 2080
HpaII CCGG 3 cut(s) 147, 597, 1873
HphI GGTGA 9 cut(s) 161, 205, 443, 695, 760, 1065, 1715, 1862, 2058
Hpy166II GTNNAC 5 cut(s) 41, 107, 397, 1283, 1360
Hpy188I TCNGA 5 cut(s) 186, 258, 664, 1026, 1827
Hpy188III TCNNGA 8 cut(s) 206, 294, 347, 976, 1035, 1458, 1689, 1802
Hpy8I GTNNAC 5 cut(s) 41, 107, 397, 1283, 1360
HpyAV CCTTC 6 cut(s) 637, 1065, 1107, 1332, 1428, 1567
HpyCH4III ACNGT 7 cut(s) 502, 889, 962, 1567, 1650, 1816, 1989
HpyCH4IV ACGT 1 cut(s) 1972
HpyF3I CTNAG 6 cut(s) 369, 763, 1665, 1774, 1824, 1962
HpySE526I ACGT 1 cut(s) 1972
Hsp92I GRCGYC 1 cut(s) 1829
Hsp92II CATG 7 cut(s) 58, 683, 839, 1003, 1234, 1315, 1714
KpnI GGTACC 1 cut(s) 624
Kzo9I GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
LmnI GCTCC 9 cut(s) 143, 599, 1186, 1222, 1257, 1294, 1483, 1750, 1981
Lsp1109I GCAGC 5 cut(s) 49, 752, 803, 1385, 1729
MabI ACCWGGT 1 cut(s) 1297
MaeI CTAG 4 cut(s) 140, 1134, 1802, 1956
MaeII ACGT 1 cut(s) 1972
MaeIII GTNAC 4 cut(s) 766, 1583, 1703, 1853
MalI GATC 6 cut(s) 210, 244, 270, 351, 1967, 2058
MboI GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
MboII GAAGA 4 cut(s) 252, 981, 1023, 1344
MflI RGATCY 3 cut(s) 242, 349, 1965
MhlI GDGCHC 4 cut(s) 762, 986, 1262, 1978
MlyI GAGTC 1 cut(s) 253
MmeI TCCRAC 2 cut(s) 384, 905
MseI TTAA 2 cut(s) 440, 446
MslI CAYNNNNRTG 3 cut(s) 998, 1004, 1229
MspA1I CMGCKG 5 cut(s) 35, 286, 716, 743, 794
MspI CCGG 3 cut(s) 147, 597, 1873
MvnI CGCG 2 cut(s) 126, 2078
NcoI CCATGG 1 cut(s) 679
NdeI CATATG 1 cut(s) 1734
NdeII GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
NlaIII CATG 7 cut(s) 58, 683, 839, 1003, 1234, 1315, 1714
NlaIV GGNNCC 9 cut(s) 145, 204, 465, 601, 622, 879, 983, 984, 1182
NmuCI GTSAC 3 cut(s) 766, 1583, 1703
PaeR7I CTCGAG 1 cut(s) 976
PaqCI CACCTGC 1 cut(s) 31
PfeI GAWTC 5 cut(s) 181, 607, 1549, 1805, 2080
PflMI CCANNNNNTGG 2 cut(s) 665, 944
PfoI TCCNGGA 3 cut(s) 559, 852, 2032
PkrI GCNGC 7 cut(s) 64, 742, 793, 1167, 1375, 1536, 1744
PleI GAGTC 1 cut(s) 253
PmaCI CACGTG 1 cut(s) 1973
PmlI CACGTG 1 cut(s) 1973
PpsI GAGTC 1 cut(s) 253
Ppu21I YACGTR 1 cut(s) 1973
PpuMI RGGWCCY 2 cut(s) 203, 1892
Psp124BI GAGCTC 2 cut(s) 762, 1262
Psp5II RGGWCCY 2 cut(s) 203, 1892
PspCI CACGTG 1 cut(s) 1973
PspEI GGTNACC 1 cut(s) 1703
PspFI CCCAGC 3 cut(s) 71, 1185, 1253
PspN4I GGNNCC 9 cut(s) 145, 204, 465, 601, 622, 879, 983, 984, 1182
PspOMI GGGCCC 1 cut(s) 982
PspPI GGNCC 9 cut(s) 203, 463, 557, 965, 982, 983, 1280, 1892, 2030
PspPPI RGGWCCY 2 cut(s) 203, 1892
PstNI CAGNNNCTG 1 cut(s) 821
PsuI RGATCY 3 cut(s) 242, 349, 1965
PvuII CAGCTG 3 cut(s) 35, 286, 716
RsaI GTAC 8 cut(s) 10, 40, 622, 805, 909, 959, 1091, 1813
RsaNI GTAC 8 cut(s) 9, 39, 621, 804, 908, 958, 1090, 1812
RseI CAYNNNNRTG 3 cut(s) 998, 1004, 1229
SacI GAGCTC 2 cut(s) 762, 1262
SalI GTCGAC 1 cut(s) 395
SaqAI TTAA 2 cut(s) 440, 446
SatI GCNGC 7 cut(s) 63, 741, 792, 1166, 1374, 1535, 1743
Sau3AI GATC 6 cut(s) 208, 242, 268, 349, 1965, 2056
Sau96I GGNCC 9 cut(s) 203, 463, 557, 965, 982, 983, 1280, 1892, 2030
SchI GAGTC 1 cut(s) 253
SduI GDGCHC 4 cut(s) 762, 986, 1262, 1978
SexAI ACCWGGT 1 cut(s) 1297
SfcI CTRYAG 1 cut(s) 498
Sfr274I CTCGAG 1 cut(s) 976
SinI GGWCC 6 cut(s) 203, 557, 965, 1280, 1892, 2030
SlaI CTCGAG 1 cut(s) 976
SmiMI CAYNNNNRTG 3 cut(s) 998, 1004, 1229
SmlI CTYRAG 4 cut(s) 345, 976, 1404, 1641
SmoI CTYRAG 4 cut(s) 345, 976, 1404, 1641
SsiI CCGC 9 cut(s) 126, 418, 743, 794, 1115, 1166, 1278, 1535, 2076
SspI AATATT 1 cut(s) 1474
SspMI CTAG 4 cut(s) 140, 1134, 1802, 1956
SstI GAGCTC 2 cut(s) 762, 1262
StyI CCWWGG 4 cut(s) 66, 139, 679, 1904
TaaI ACNGT 7 cut(s) 502, 889, 962, 1567, 1650, 1816, 1989
TaiI ACGT 1 cut(s) 1975
TaqI TCGA 5 cut(s) 396, 977, 1034, 1540, 1688
TaqII GACCGA 1 cut(s) 1864
TatI WGTACW 1 cut(s) 803
TauI GCSGC 2 cut(s) 1168, 1537
TfiI GAWTC 5 cut(s) 181, 607, 1549, 1805, 2080
Tru1I TTAA 2 cut(s) 440, 446
Tru9I TTAA 2 cut(s) 440, 446
TscAI CASTG 5 cut(s) 921, 945, 1203, 1251, 1404
TseFI GTSAC 3 cut(s) 766, 1583, 1703
TseI GCWGC 5 cut(s) 62, 740, 791, 1373, 1742
Tsp45I GTSAC 3 cut(s) 766, 1583, 1703
TspDTI ATGAA 4 cut(s) 695, 705, 1089, 1219
TspRI CASTG 5 cut(s) 921, 945, 1203, 1251, 1404
Van91I CCANNNNNTGG 2 cut(s) 665, 944
VpaK11BI GGWCC 6 cut(s) 203, 557, 965, 1280, 1892, 2030
XagI CCTNNNNNAGG 3 cut(s) 1407, 1668, 2037
XapI RAATTY 3 cut(s) 1027, 1759, 1926
XbaI TCTAGA 1 cut(s) 1801
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XhoI CTCGAG 1 cut(s) 976
XmaJI CCTAGG 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 396
XspI CTAG 4 cut(s) 140, 1134, 1802, 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.