ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g10222 |
| pyrus_communis | pycom05g03820 pycom13g14160 |
| rosa_chinensis | RchiOBHm_Chr3g0481911 RchiOBHm_Chr7g0230761 |
| rosa_multiflora | Rmu_co8504529.1_g000002 Rmu_sc0001350.1_g000011 Rmu_sc0001847.1_g000004 Rmu_sc0006323.1_g000012 Rmu_sc0007994.1_g000004 Rmu_sc0010800.1_g000001 Rmu_sc0013801.1_g000003 Rmu_sc0018646.1_g000004 Rmu_sc0024195.1_g000003 Rmu_sc0037386.1_g000001 Rmu_sc0040395.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00233950 Rroxscaffold_3G00238590 Rroxscaffold_5G00334460 Rroxscaffold_7G00177700 Rroxscaffold_7G00178180 |
| rosa_rugosa | Rorug07G0126600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 154 |
| AciI | CCGC | 1 cut(s) | 346 |
| AcsI | RAATTY | 4 cut(s) | 4, 130, 163, 447 |
| AfaI | GTAC | 1 cut(s) | 178 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| AflII | CTTAAG | 1 cut(s) | 494 |
| AgsI | TTSAA | 1 cut(s) | 478 |
| AjnI | CCWGG | 1 cut(s) | 79 |
| AluBI | AGCT | 4 cut(s) | 321, 425, 461, 499 |
| AluI | AGCT | 4 cut(s) | 321, 425, 461, 499 |
| Aor13HI | TCCGGA | 1 cut(s) | 154 |
| ApoI | RAATTY | 4 cut(s) | 4, 130, 163, 447 |
| AspS9I | GGNCC | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 1 cut(s) | 305 |
| AvaII | GGWCC | 1 cut(s) | 83 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 387, 420 |
| BccI | CCATC | 3 cut(s) | 83, 88, 242 |
| BceAI | ACGGC | 1 cut(s) | 204 |
| BciT130I | CCWGG | 1 cut(s) | 81 |
| BciVI | GTATCC | 2 cut(s) | 75, 246 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BfmI | CTRYAG | 3 cut(s) | 33, 192, 420 |
| BfrI | CTTAAG | 1 cut(s) | 494 |
| BfuI | GTATCC | 2 cut(s) | 75, 246 |
| Bme1390I | CCNGG | 1 cut(s) | 81 |
| Bme18I | GGWCC | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 1 cut(s) | 83 |
| BmrFI | CCNGG | 1 cut(s) | 81 |
| BmsI | GCATC | 1 cut(s) | 89 |
| BpuEI | CTTGAG | 1 cut(s) | 384 |
| BsaJI | CCNNGG | 1 cut(s) | 79 |
| BsaWI | WCCGGW | 3 cut(s) | 85, 154, 244 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| Bse3DI | GCAATG | 1 cut(s) | 439 |
| BseAI | TCCGGA | 1 cut(s) | 154 |
| BseBI | CCWGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 79 |
| BseGI | GGATG | 5 cut(s) | 94, 99, 104, 253, 289 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| BseMI | GCAATG | 1 cut(s) | 439 |
| BsiSI | CCGG | 3 cut(s) | 86, 155, 245 |
| BslFI | GGGAC | 2 cut(s) | 61, 475 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 85, 244 |
| BsmFI | GGGAC | 2 cut(s) | 61, 475 |
| Bsp13I | TCCGGA | 1 cut(s) | 154 |
| BspACI | CCGC | 1 cut(s) | 346 |
| BspEI | TCCGGA | 1 cut(s) | 154 |
| BspTI | CTTAAG | 1 cut(s) | 494 |
| BsrDI | GCAATG | 1 cut(s) | 439 |
| BssECI | CCNNGG | 1 cut(s) | 79 |
| Bst2UI | CCWGG | 1 cut(s) | 81 |
| BstAFI | CTTAAG | 1 cut(s) | 494 |
| BstDEI | CTNAG | 3 cut(s) | 72, 231, 579 |
| BstF5I | GGATG | 5 cut(s) | 94, 99, 104, 253, 289 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstNI | CCWGG | 1 cut(s) | 81 |
| BstSCI | CCNGG | 1 cut(s) | 79 |
| BstSFI | CTRYAG | 3 cut(s) | 33, 192, 420 |
| BsuI | GTATCC | 2 cut(s) | 75, 246 |
| BtsCI | GGATG | 5 cut(s) | 94, 99, 104, 253, 289 |
| Cfr13I | GGNCC | 1 cut(s) | 83 |
| Csp6I | GTAC | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 412 |
| CviQI | GTAC | 1 cut(s) | 177 |
| DdeI | CTNAG | 3 cut(s) | 72, 231, 579 |
| Eco47I | GGWCC | 1 cut(s) | 83 |
| EcoRII | CCWGG | 1 cut(s) | 79 |
| FaeI | CATG | 1 cut(s) | 415 |
| FaqI | GGGAC | 2 cut(s) | 61, 475 |
| FatI | CATG | 1 cut(s) | 411 |
| FauI | CCCGC | 1 cut(s) | 339 |
| FauNDI | CATATG | 1 cut(s) | 517 |
| FokI | GGATG | 5 cut(s) | 101, 106, 111, 260, 296 |
| FspBI | CTAG | 1 cut(s) | 240 |
| HapII | CCGG | 3 cut(s) | 86, 155, 245 |
| Hin1II | CATG | 1 cut(s) | 415 |
| HindIII | AAGCTT | 2 cut(s) | 319, 497 |
| HinfI | GANTC | 1 cut(s) | 508 |
| HpaII | CCGG | 3 cut(s) | 86, 155, 245 |
| HphI | GGTGA | 1 cut(s) | 305 |
| Hpy166II | GTNNAC | 2 cut(s) | 177, 355 |
| Hpy188I | TCNGA | 3 cut(s) | 60, 219, 409 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| Hpy8I | GTNNAC | 2 cut(s) | 177, 355 |
| HpyAV | CCTTC | 1 cut(s) | 472 |
| HpyCH4V | TGCA | 1 cut(s) | 432 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| HpyF3I | CTNAG | 3 cut(s) | 72, 231, 579 |
| Hsp92II | CATG | 1 cut(s) | 415 |
| Kpn2I | TCCGGA | 1 cut(s) | 154 |
| LpnPI | CCDG | 7 cut(s) | 66, 93, 99, 168, 258, 318, 497 |
| LweI | GCATC | 1 cut(s) | 89 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MboII | GAAGA | 1 cut(s) | 332 |
| MfeI | CAATTG | 1 cut(s) | 277 |
| MluCI | AATT | 6 cut(s) | 4, 130, 163, 277, 447, 469 |
| MlyI | GAGTC | 1 cut(s) | 517 |
| MnlI | CCTC | 5 cut(s) | 113, 267, 383, 408, 538 |
| MroI | TCCGGA | 1 cut(s) | 154 |
| MseI | TTAA | 3 cut(s) | 42, 201, 495 |
| MslI | CAYNNNNRTG | 1 cut(s) | 125 |
| MspCI | CTTAAG | 1 cut(s) | 494 |
| MspI | CCGG | 3 cut(s) | 86, 155, 245 |
| MspR9I | CCNGG | 1 cut(s) | 81 |
| MunI | CAATTG | 1 cut(s) | 277 |
| MvaI | CCWGG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NdeI | CATATG | 1 cut(s) | 517 |
| NlaIII | CATG | 1 cut(s) | 415 |
| PleI | GAGTC | 1 cut(s) | 516 |
| PpsI | GAGTC | 1 cut(s) | 516 |
| Psp6I | CCWGG | 1 cut(s) | 79 |
| PspGI | CCWGG | 1 cut(s) | 79 |
| PspPI | GGNCC | 1 cut(s) | 83 |
| RsaI | GTAC | 1 cut(s) | 178 |
| RsaNI | GTAC | 1 cut(s) | 177 |
| RseI | CAYNNNNRTG | 1 cut(s) | 125 |
| SaqAI | TTAA | 3 cut(s) | 42, 201, 495 |
| Sau96I | GGNCC | 1 cut(s) | 83 |
| SchI | GAGTC | 1 cut(s) | 517 |
| ScrFI | CCNGG | 1 cut(s) | 81 |
| SetI | ASST | 7 cut(s) | 150, 259, 323, 427, 463, 501, 549 |
| SfaNI | GCATC | 1 cut(s) | 89 |
| SfcI | CTRYAG | 3 cut(s) | 33, 192, 420 |
| SinI | GGWCC | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 125 |
| SmlI | CTYRAG | 2 cut(s) | 399, 494 |
| SmoI | CTYRAG | 2 cut(s) | 399, 494 |
| Sse9I | AATT | 6 cut(s) | 4, 130, 163, 277, 447, 469 |
| SsiI | CCGC | 1 cut(s) | 346 |
| SspMI | CTAG | 1 cut(s) | 240 |
| StyD4I | CCNGG | 1 cut(s) | 79 |
| TasI | AATT | 6 cut(s) | 4, 130, 163, 277, 447, 469 |
| TatI | WGTACW | 1 cut(s) | 176 |
| Tru1I | TTAA | 3 cut(s) | 42, 201, 495 |
| Tru9I | TTAA | 3 cut(s) | 42, 201, 495 |
| TspDTI | ATGAA | 3 cut(s) | 17, 176, 542 |
| Vha464I | CTTAAG | 1 cut(s) | 494 |
| VpaK11BI | GGWCC | 1 cut(s) | 83 |
| XapI | RAATTY | 4 cut(s) | 4, 130, 163, 447 |
| XspI | CTAG | 1 cut(s) | 240 |