ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g10222 |
| pyrus_communis | pycom05g03820 pycom13g14160 |
| rosa_chinensis | RchiOBHm_Chr3g0481911 RchiOBHm_Chr7g0230761 |
| rosa_multiflora | Rmu_co8504529.1_g000002 Rmu_sc0001350.1_g000011 Rmu_sc0001847.1_g000004 Rmu_sc0006323.1_g000012 Rmu_sc0007994.1_g000004 Rmu_sc0010800.1_g000001 Rmu_sc0013801.1_g000003 Rmu_sc0018646.1_g000004 Rmu_sc0024195.1_g000003 Rmu_sc0037386.1_g000001 Rmu_sc0040395.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00233950 Rroxscaffold_3G00238590 Rroxscaffold_5G00334460 Rroxscaffold_7G00177700 Rroxscaffold_7G00178180 |
| rosa_rugosa | Rorug07G0126600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 279 |
| AciI | CCGC | 1 cut(s) | 163 |
| AcoI | YGGCCR | 2 cut(s) | 41, 164 |
| AcsI | RAATTY | 1 cut(s) | 22 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AgsI | TTSAA | 1 cut(s) | 226 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 218, 250 |
| Alw21I | GWGCWC | 1 cut(s) | 275 |
| Alw26I | GTCTC | 1 cut(s) | 253 |
| AoxI | GGCC | 2 cut(s) | 41, 164 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| AseI | ATTAAT | 1 cut(s) | 102 |
| AsuHPI | GGTGA | 1 cut(s) | 243 |
| AxyI | CCTNAGG | 1 cut(s) | 129 |
| Bbv12I | GWGCWC | 1 cut(s) | 275 |
| BccI | CCATC | 1 cut(s) | 139 |
| BcoDI | GTCTC | 1 cut(s) | 253 |
| BfaI | CTAG | 1 cut(s) | 56 |
| BglII | AGATCT | 1 cut(s) | 231 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 231, 261 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| Bse21I | CCTNAGG | 1 cut(s) | 129 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseGI | GGATG | 1 cut(s) | 52 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BshFI | GGCC | 2 cut(s) | 43, 166 |
| BsiHKAI | GWGCWC | 1 cut(s) | 275 |
| BsiSI | CCGG | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsmAI | GTCTC | 1 cut(s) | 253 |
| BsnI | GGCC | 2 cut(s) | 43, 166 |
| Bsp1286I | GDGCHC | 1 cut(s) | 275 |
| Bsp143I | GATC | 2 cut(s) | 231, 284 |
| BspACI | CCGC | 1 cut(s) | 163 |
| BspANI | GGCC | 2 cut(s) | 43, 166 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BssMI | GATC | 2 cut(s) | 231, 284 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 159 |
| BstDEI | CTNAG | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 52 |
| BstKTI | GATC | 2 cut(s) | 234, 287 |
| BstMAI | GTCTC | 1 cut(s) | 253 |
| BstMBI | GATC | 2 cut(s) | 231, 284 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstX2I | RGATCY | 1 cut(s) | 231 |
| BstYI | RGATCY | 1 cut(s) | 231 |
| Bsu36I | CCTNAGG | 1 cut(s) | 129 |
| BsuRI | GGCC | 2 cut(s) | 43, 166 |
| BtsCI | GGATG | 1 cut(s) | 52 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 4 cut(s) | 43, 71, 84, 166 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 71, 84, 166 |
| DdeI | CTNAG | 1 cut(s) | 129 |
| DpnI | GATC | 2 cut(s) | 233, 286 |
| DpnII | GATC | 2 cut(s) | 231, 284 |
| DraI | TTTAAA | 1 cut(s) | 75 |
| EaeI | YGGCCR | 2 cut(s) | 41, 164 |
| Eco81I | CCTNAGG | 1 cut(s) | 129 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 4 cut(s) | 108, 114, 152, 178 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 218, 250 |
| FatI | CATG | 1 cut(s) | 112 |
| FblI | GTMKAC | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| FokI | GGATG | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| FspBI | CTAG | 1 cut(s) | 56 |
| GluI | GCNGC | 1 cut(s) | 164 |
| HaeIII | GGCC | 2 cut(s) | 43, 166 |
| HapII | CCGG | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HpaII | CCGG | 1 cut(s) | 44 |
| HphI | GGTGA | 1 cut(s) | 243 |
| Hpy166II | GTNNAC | 1 cut(s) | 280 |
| Hpy188I | TCNGA | 2 cut(s) | 21, 144 |
| Hpy188III | TCNNGA | 2 cut(s) | 95, 288 |
| Hpy8I | GTNNAC | 1 cut(s) | 280 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 159 |
| HpyCH4V | TGCA | 2 cut(s) | 180, 258 |
| HpyF3I | CTNAG | 1 cut(s) | 129 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| Kzo9I | GATC | 2 cut(s) | 231, 284 |
| LmnI | GCTCC | 1 cut(s) | 206 |
| LpnPI | CCDG | 3 cut(s) | 57, 66, 205 |
| MaeI | CTAG | 1 cut(s) | 56 |
| MaeIII | GTNAC | 1 cut(s) | 115 |
| MalI | GATC | 2 cut(s) | 233, 286 |
| MboI | GATC | 2 cut(s) | 231, 284 |
| MboII | GAAGA | 2 cut(s) | 238, 241 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MflI | RGATCY | 1 cut(s) | 231 |
| MhlI | GDGCHC | 1 cut(s) | 275 |
| MluCI | AATT | 3 cut(s) | 22, 103, 168 |
| MnlI | CCTC | 1 cut(s) | 61 |
| MseI | TTAA | 3 cut(s) | 63, 74, 102 |
| MspI | CCGG | 1 cut(s) | 44 |
| MunI | CAATTG | 1 cut(s) | 168 |
| NdeII | GATC | 2 cut(s) | 231, 284 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| PshBI | ATTAAT | 1 cut(s) | 102 |
| PsuI | RGATCY | 1 cut(s) | 231 |
| SaqAI | TTAA | 3 cut(s) | 63, 74, 102 |
| SatI | GCNGC | 1 cut(s) | 164 |
| Sau3AI | GATC | 2 cut(s) | 231, 284 |
| SduI | GDGCHC | 1 cut(s) | 275 |
| SetI | ASST | 3 cut(s) | 135, 224, 256 |
| Sse9I | AATT | 3 cut(s) | 22, 103, 168 |
| SsiI | CCGC | 1 cut(s) | 163 |
| SspMI | CTAG | 1 cut(s) | 56 |
| TaaI | ACNGT | 2 cut(s) | 38, 159 |
| TaqI | TCGA | 1 cut(s) | 289 |
| TasI | AATT | 3 cut(s) | 22, 103, 168 |
| TauI | GCSGC | 1 cut(s) | 166 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| Tru1I | TTAA | 3 cut(s) | 63, 74, 102 |
| Tru9I | TTAA | 3 cut(s) | 63, 74, 102 |
| VspI | ATTAAT | 1 cut(s) | 102 |
| XapI | RAATTY | 1 cut(s) | 22 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XmiI | GTMKAC | 1 cut(s) | 279 |
| XspI | CTAG | 1 cut(s) | 56 |