ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g10222 |
| pyrus_communis | pycom05g03820 pycom13g14160 |
| rosa_chinensis | RchiOBHm_Chr3g0481911 RchiOBHm_Chr7g0230761 |
| rosa_multiflora | Rmu_co8504529.1_g000002 Rmu_sc0001350.1_g000011 Rmu_sc0001847.1_g000004 Rmu_sc0006323.1_g000012 Rmu_sc0007994.1_g000004 Rmu_sc0010800.1_g000001 Rmu_sc0013801.1_g000003 Rmu_sc0018646.1_g000004 Rmu_sc0024195.1_g000003 Rmu_sc0037386.1_g000001 Rmu_sc0040395.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00233950 Rroxscaffold_3G00238590 Rroxscaffold_5G00334460 Rroxscaffold_7G00177700 Rroxscaffold_7G00178180 |
| rosa_rugosa | Rorug07G0126600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 323 |
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 1 cut(s) | 149 |
| AclWI | GGATC | 2 cut(s) | 111, 178 |
| AdeI | CACNNNGTG | 1 cut(s) | 139 |
| AflII | CTTAAG | 1 cut(s) | 359 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 268 |
| AluBI | AGCT | 2 cut(s) | 27, 355 |
| AluI | AGCT | 2 cut(s) | 27, 355 |
| AlwI | GGATC | 2 cut(s) | 111, 178 |
| AoxI | GGCC | 1 cut(s) | 192 |
| ApeKI | GCWGC | 1 cut(s) | 19 |
| AsuHPI | GGTGA | 1 cut(s) | 243 |
| AsuII | TTCGAA | 2 cut(s) | 87, 245 |
| BauI | CACGAG | 1 cut(s) | 188 |
| BbvI | GCAGC | 1 cut(s) | 31 |
| BccI | CCATC | 1 cut(s) | 9 |
| BceAI | ACGGC | 1 cut(s) | 219 |
| BfaI | CTAG | 3 cut(s) | 42, 255, 348 |
| BfrI | CTTAAG | 1 cut(s) | 359 |
| BisI | GCNGC | 1 cut(s) | 20 |
| BlsI | GCNGC | 1 cut(s) | 21 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 268 |
| BmsI | GCATC | 2 cut(s) | 225, 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 326, 358 |
| Bpu10I | CCTNAGC | 1 cut(s) | 207 |
| Bpu14I | TTCGAA | 2 cut(s) | 87, 245 |
| BseGI | GGATG | 2 cut(s) | 238, 319 |
| BseMII | CTCAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| BshFI | GGCC | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 194 |
| Bsp119I | TTCGAA | 2 cut(s) | 87, 245 |
| Bsp143I | GATC | 3 cut(s) | 51, 103, 183 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspANI | GGCC | 1 cut(s) | 194 |
| BspCNI | CTCAG | 1 cut(s) | 24 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspPI | GGATC | 2 cut(s) | 111, 178 |
| BspT104I | TTCGAA | 2 cut(s) | 87, 245 |
| BspTI | CTTAAG | 1 cut(s) | 359 |
| BssMI | GATC | 3 cut(s) | 51, 103, 183 |
| BssNAI | GTATAC | 1 cut(s) | 324 |
| BssSI | CACGAG | 1 cut(s) | 188 |
| Bst1107I | GTATAC | 1 cut(s) | 324 |
| Bst2BI | CACGAG | 1 cut(s) | 188 |
| Bst4CI | ACNGT | 1 cut(s) | 328 |
| BstAFI | CTTAAG | 1 cut(s) | 359 |
| BstBI | TTCGAA | 2 cut(s) | 87, 245 |
| BstDEI | CTNAG | 3 cut(s) | 11, 207, 411 |
| BstF5I | GGATG | 2 cut(s) | 238, 319 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstKTI | GATC | 3 cut(s) | 54, 106, 186 |
| BstMBI | GATC | 3 cut(s) | 51, 103, 183 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 31 |
| BstX2I | RGATCY | 1 cut(s) | 183 |
| BstYI | RGATCY | 1 cut(s) | 183 |
| BstZ17I | GTATAC | 1 cut(s) | 324 |
| BsuRI | GGCC | 1 cut(s) | 194 |
| BtsCI | GGATG | 2 cut(s) | 238, 319 |
| CseI | GACGC | 1 cut(s) | 155 |
| CviAII | CATG | 1 cut(s) | 107 |
| CviJI | RGCY | 6 cut(s) | 27, 157, 194, 206, 355, 409 |
| CviKI_1 | RGCY | 6 cut(s) | 27, 157, 194, 206, 355, 409 |
| DdeI | CTNAG | 3 cut(s) | 11, 207, 411 |
| DpnI | GATC | 3 cut(s) | 53, 105, 185 |
| DpnII | GATC | 3 cut(s) | 51, 103, 183 |
| DraIII | CACNNNGTG | 1 cut(s) | 139 |
| DriI | GACNNNNNGTC | 1 cut(s) | 268 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 268 |
| EcoT22I | ATGCAT | 1 cut(s) | 240 |
| FaeI | CATG | 1 cut(s) | 110 |
| FaiI | YATR | 7 cut(s) | 99, 101, 108, 269, 324, 379, 381 |
| FatI | CATG | 1 cut(s) | 106 |
| FauNDI | CATATG | 1 cut(s) | 379 |
| FblI | GTMKAC | 1 cut(s) | 323 |
| Fnu4HI | GCNGC | 1 cut(s) | 20 |
| FokI | GGATG | 2 cut(s) | 225, 326 |
| Fsp4HI | GCNGC | 1 cut(s) | 20 |
| FspBI | CTAG | 3 cut(s) | 42, 255, 348 |
| GluI | GCNGC | 1 cut(s) | 20 |
| HaeIII | GGCC | 1 cut(s) | 194 |
| HgaI | GACGC | 1 cut(s) | 155 |
| Hin1II | CATG | 1 cut(s) | 110 |
| HindIII | AAGCTT | 1 cut(s) | 353 |
| HinfI | GANTC | 1 cut(s) | 391 |
| HphI | GGTGA | 1 cut(s) | 243 |
| Hpy166II | GTNNAC | 1 cut(s) | 324 |
| Hpy188I | TCNGA | 2 cut(s) | 14, 396 |
| Hpy188III | TCNNGA | 5 cut(s) | 65, 172, 232, 260, 295 |
| Hpy8I | GTNNAC | 1 cut(s) | 324 |
| Hpy99I | CGWCG | 1 cut(s) | 149 |
| HpyAV | CCTTC | 4 cut(s) | 40, 140, 252, 391 |
| HpyCH4III | ACNGT | 1 cut(s) | 328 |
| HpyCH4IV | ACGT | 1 cut(s) | 264 |
| HpyCH4V | TGCA | 1 cut(s) | 238 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 207, 411 |
| HpySE526I | ACGT | 1 cut(s) | 264 |
| Hsp92II | CATG | 1 cut(s) | 110 |
| Kzo9I | GATC | 3 cut(s) | 51, 103, 183 |
| LmnI | GCTCC | 1 cut(s) | 32 |
| LpnPI | CCDG | 3 cut(s) | 245, 273, 280 |
| Lsp1109I | GCAGC | 1 cut(s) | 31 |
| LweI | GCATC | 2 cut(s) | 225, 247 |
| MaeI | CTAG | 3 cut(s) | 42, 255, 348 |
| MaeII | ACGT | 1 cut(s) | 264 |
| MaeIII | GTNAC | 3 cut(s) | 6, 65, 139 |
| MalI | GATC | 3 cut(s) | 53, 105, 185 |
| MboI | GATC | 3 cut(s) | 51, 103, 183 |
| MflI | RGATCY | 1 cut(s) | 183 |
| MluCI | AATT | 2 cut(s) | 71, 365 |
| MnlI | CCTC | 4 cut(s) | 197, 205, 205, 304 |
| Mph1103I | ATGCAT | 1 cut(s) | 240 |
| MseI | TTAA | 2 cut(s) | 360, 402 |
| MspCI | CTTAAG | 1 cut(s) | 359 |
| MvnI | CGCG | 1 cut(s) | 149 |
| NdeI | CATATG | 1 cut(s) | 379 |
| NdeII | GATC | 3 cut(s) | 51, 103, 183 |
| NlaIII | CATG | 1 cut(s) | 110 |
| NmuCI | GTSAC | 2 cut(s) | 65, 139 |
| NsiI | ATGCAT | 1 cut(s) | 240 |
| NspV | TTCGAA | 2 cut(s) | 87, 245 |
| PfeI | GAWTC | 1 cut(s) | 391 |
| PkrI | GCNGC | 1 cut(s) | 21 |
| PsuI | RGATCY | 1 cut(s) | 183 |
| SaqAI | TTAA | 2 cut(s) | 360, 402 |
| SatI | GCNGC | 1 cut(s) | 20 |
| Sau3AI | GATC | 3 cut(s) | 51, 103, 183 |
| SetI | ASST | 6 cut(s) | 29, 216, 256, 267, 357, 402 |
| SfaNI | GCATC | 2 cut(s) | 225, 247 |
| SfuI | TTCGAA | 2 cut(s) | 87, 245 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 2 cut(s) | 71, 365 |
| SsiI | CCGC | 1 cut(s) | 149 |
| SspI | AATATT | 1 cut(s) | 301 |
| SspMI | CTAG | 3 cut(s) | 42, 255, 348 |
| TaaI | ACNGT | 1 cut(s) | 328 |
| TaiI | ACGT | 1 cut(s) | 267 |
| TaqI | TCGA | 3 cut(s) | 87, 171, 245 |
| TaqII | GACCGA | 1 cut(s) | 158 |
| TasI | AATT | 2 cut(s) | 71, 365 |
| TfiI | GAWTC | 1 cut(s) | 391 |
| Tru1I | TTAA | 2 cut(s) | 360, 402 |
| Tru9I | TTAA | 2 cut(s) | 360, 402 |
| TseFI | GTSAC | 2 cut(s) | 65, 139 |
| TseI | GCWGC | 1 cut(s) | 19 |
| Tsp45I | GTSAC | 2 cut(s) | 65, 139 |
| TspDTI | ATGAA | 1 cut(s) | 191 |
| TspGWI | ACGGA | 1 cut(s) | 127 |
| Vha464I | CTTAAG | 1 cut(s) | 359 |
| XmiI | GTMKAC | 1 cut(s) | 323 |
| XspI | CTAG | 3 cut(s) | 42, 255, 348 |
| Zsp2I | ATGCAT | 1 cut(s) | 240 |