Homeobox protein knotted-1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23380 AT1G23380 AT1G70510 AT1G70510 |
| fragaria_vesca | FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_5g05530 FvH4_5g05530 |
| malus_domestica | MD06G1171700.v1.1 MD13G1095800.v1.1 MD14G1177200.v1.1 MD16G1097200.v1.1 |
| prunus_persica | Prupe.1G249600_v2.0.a1 Prupe.5G171100_v2.0.a1 |
| pyrus_communis | pycom06g15280 pycom13g08340 pycom14g14800 pycom16g08280 |
| rosa_chinensis | RchiOBHm_Chr4g0433571 RchiOBHm_Chr7g0193251 |
| rosa_laevigata | RLG00000004283 RLG00000006743 |
| rosa_multiflora | Rmu_sc0017266.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00262250 Rroxscaffold_5G00375060 |
| rosa_rugosa | Rorug04G0269800 Rorug07G0008500 Rorug07G0008600 |
| rosa_samantha | Rh4AG324700 Rh4BG332400 Rh4CG347700 Rh4DG328800 Rh7AG134100 Rh7BG135100 Rh7CG138100 Rh7DG136100 |
| rosa_wichuraiana | Rw4G028100 Rw7G011470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 180 |
| AccB1I | GGYRCC | 4 cut(s) | 154, 208, 248, 701 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 322 |
| AccI | GTMKAC | 1 cut(s) | 36 |
| AccII | CGCG | 2 cut(s) | 144, 225 |
| AccIII | TCCGGA | 3 cut(s) | 131, 334, 913 |
| AciI | CCGC | 6 cut(s) | 29, 142, 225, 388, 556, 609 |
| AclWI | GGATC | 4 cut(s) | 91, 165, 178, 422 |
| AcoI | YGGCCR | 1 cut(s) | 800 |
| AcuI | CTGAAG | 1 cut(s) | 758 |
| AcvI | CACGTG | 1 cut(s) | 414 |
| AcyI | GRCGYC | 2 cut(s) | 83, 177 |
| AfaI | GTAC | 7 cut(s) | 14, 191, 479, 627, 959, 1024, 1039 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 28, 106, 322, 1032 |
| AflIII | ACRYGT | 2 cut(s) | 413, 946 |
| AgsI | TTSAA | 3 cut(s) | 526, 536, 709 |
| AluBI | AGCT | 9 cut(s) | 56, 137, 282, 348, 436, 544, 635, 712, 745 |
| AluI | AGCT | 9 cut(s) | 56, 137, 282, 348, 436, 544, 635, 712, 745 |
| Alw21I | GWGCWC | 1 cut(s) | 438 |
| Alw26I | GTCTC | 3 cut(s) | 225, 390, 864 |
| AlwI | GGATC | 4 cut(s) | 91, 165, 178, 422 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 121 |
| Ama87I | CYCGRG | 1 cut(s) | 431 |
| Aor13HI | TCCGGA | 3 cut(s) | 131, 334, 913 |
| AoxI | GGCC | 5 cut(s) | 72, 300, 423, 497, 800 |
| ApaI | GGGCCC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 3 cut(s) | 401, 541, 584 |
| AspLEI | GCGC | 2 cut(s) | 225, 331 |
| AspS9I | GGNCC | 4 cut(s) | 72, 73, 423, 916 |
| AsuHPI | GGTGA | 1 cut(s) | 626 |
| AsuII | TTCGAA | 1 cut(s) | 562 |
| AvaI | CYCGRG | 1 cut(s) | 431 |
| AvaII | GGWCC | 1 cut(s) | 916 |
| BaeGI | GKGCMC | 1 cut(s) | 76 |
| BalI | TGGCCA | 1 cut(s) | 802 |
| BamHI | GGATCC | 1 cut(s) | 170 |
| BanI | GGYRCC | 4 cut(s) | 154, 208, 248, 701 |
| BanII | GRGCYC | 3 cut(s) | 76, 438, 818 |
| BbrPI | CACGTG | 1 cut(s) | 414 |
| Bbv12I | GWGCWC | 1 cut(s) | 438 |
| BbvI | GCAGC | 3 cut(s) | 388, 553, 571 |
| BccI | CCATC | 5 cut(s) | 100, 156, 260, 282, 882 |
| BceAI | ACGGC | 1 cut(s) | 880 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 563, 597 |
| BclI | TGATCA | 1 cut(s) | 988 |
| BcoDI | GTCTC | 3 cut(s) | 225, 390, 864 |
| BfaI | CTAG | 2 cut(s) | 288, 642 |
| BfoI | RGCGCY | 1 cut(s) | 332 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 71 |
| BglII | AGATCT | 1 cut(s) | 658 |
| BisI | GCNGC | 3 cut(s) | 402, 542, 585 |
| BlpI | GCTNAGC | 1 cut(s) | 545 |
| BlsI | GCNGC | 3 cut(s) | 403, 543, 586 |
| Bme18I | GGWCC | 1 cut(s) | 916 |
| BmeT110I | CYCGRG | 1 cut(s) | 431 |
| BmgT120I | GGNCC | 4 cut(s) | 72, 73, 423, 916 |
| BmiI | GGNNCC | 7 cut(s) | 74, 156, 172, 210, 250, 424, 703 |
| BpmI | CTGGAG | 2 cut(s) | 734, 888 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 545 |
| Bpu14I | TTCGAA | 1 cut(s) | 562 |
| Bsa29I | ATCGAT | 1 cut(s) | 309 |
| BsaAI | YACGTR | 2 cut(s) | 414, 680 |
| BsaBI | GATNNNNATC | 3 cut(s) | 22, 657, 993 |
| BsaHI | GRCGYC | 2 cut(s) | 83, 177 |
| BsaI | GGTCTC | 1 cut(s) | 864 |
| BsaJI | CCNNGG | 1 cut(s) | 204 |
| BsaWI | WCCGGW | 5 cut(s) | 131, 211, 334, 913, 1032 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 28, 106, 322, 1032 |
| Bse1I | ACTGG | 2 cut(s) | 844, 871 |
| Bse8I | GATNNNNATC | 3 cut(s) | 22, 657, 993 |
| BseAI | TCCGGA | 3 cut(s) | 131, 334, 913 |
| BseCI | ATCGAT | 1 cut(s) | 309 |
| BseDI | CCNNGG | 1 cut(s) | 204 |
| BseGI | GGATG | 1 cut(s) | 274 |
| BseJI | GATNNNNATC | 3 cut(s) | 22, 657, 993 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 28, 106, 322, 1032 |
| BseMII | CTCAG | 2 cut(s) | 559, 650 |
| BseNI | ACTGG | 2 cut(s) | 844, 871 |
| BseRI | GAGGAG | 4 cut(s) | 243, 611, 614, 965 |
| BseSI | GKGCMC | 1 cut(s) | 76 |
| BseXI | GCAGC | 3 cut(s) | 388, 553, 571 |
| Bsh1236I | CGCG | 2 cut(s) | 144, 225 |
| BshFI | GGCC | 5 cut(s) | 74, 302, 425, 499, 802 |
| BshNI | GGYRCC | 4 cut(s) | 154, 208, 248, 701 |
| BshVI | ATCGAT | 1 cut(s) | 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 438 |
| BsiHKCI | CYCGRG | 1 cut(s) | 431 |
| BsiSI | CCGG | 6 cut(s) | 86, 132, 212, 335, 914, 1033 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 28, 106, 322, 1032 |
| BsmAI | GTCTC | 3 cut(s) | 225, 390, 864 |
| BsmBI | CGTCTC | 2 cut(s) | 225, 390 |
| BsmI | GAATGC | 1 cut(s) | 558 |
| BsnI | GGCC | 5 cut(s) | 74, 302, 425, 499, 802 |
| Bso31I | GGTCTC | 1 cut(s) | 864 |
| BsoBI | CYCGRG | 1 cut(s) | 431 |
| Bsp119I | TTCGAA | 1 cut(s) | 562 |
| Bsp120I | GGGCCC | 1 cut(s) | 72 |
| Bsp1286I | GDGCHC | 3 cut(s) | 76, 438, 818 |
| Bsp13I | TCCGGA | 3 cut(s) | 131, 334, 913 |
| Bsp1407I | TGTACA | 1 cut(s) | 1037 |
| Bsp143I | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 545 |
| BspACI | CCGC | 6 cut(s) | 29, 142, 225, 388, 556, 609 |
| BspANI | GGCC | 5 cut(s) | 74, 302, 425, 499, 802 |
| BspCNI | CTCAG | 2 cut(s) | 558, 649 |
| BspDI | ATCGAT | 1 cut(s) | 309 |
| BspEI | TCCGGA | 3 cut(s) | 131, 334, 913 |
| BspFNI | CGCG | 2 cut(s) | 144, 225 |
| BspHI | TCATGA | 3 cut(s) | 78, 978, 985 |
| BspLI | GGNNCC | 7 cut(s) | 74, 156, 172, 210, 250, 424, 703 |
| BspPI | GGATC | 4 cut(s) | 91, 165, 178, 422 |
| BspT104I | TTCGAA | 1 cut(s) | 562 |
| BspT107I | GGYRCC | 4 cut(s) | 154, 208, 248, 701 |
| BspTNI | GGTCTC | 1 cut(s) | 864 |
| BsrGI | TGTACA | 1 cut(s) | 1037 |
| BsrI | ACTGG | 2 cut(s) | 844, 871 |
| BssECI | CCNNGG | 1 cut(s) | 204 |
| BssMI | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| BssNI | GRCGYC | 2 cut(s) | 83, 177 |
| BstACI | GRCGYC | 2 cut(s) | 83, 177 |
| BstAUI | TGTACA | 1 cut(s) | 1037 |
| BstBAI | YACGTR | 2 cut(s) | 414, 680 |
| BstBI | TTCGAA | 1 cut(s) | 562 |
| BstC8I | GCNNGC | 2 cut(s) | 122, 346 |
| BstDEI | CTNAG | 2 cut(s) | 545, 636 |
| BstF5I | GGATG | 1 cut(s) | 274 |
| BstFNI | CGCG | 2 cut(s) | 144, 225 |
| BstH2I | RGCGCY | 1 cut(s) | 332 |
| BstHHI | GCGC | 2 cut(s) | 225, 331 |
| BstKTI | GATC | 8 cut(s) | 99, 173, 430, 490, 655, 661, 822, 991 |
| BstMAI | GTCTC | 3 cut(s) | 225, 390, 864 |
| BstMBI | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 62, 71, 257, 266, 555, 764 |
| BstNSI | RCATGY | 2 cut(s) | 888, 950 |
| BstSLI | GKGCMC | 1 cut(s) | 76 |
| BstSNI | TACGTA | 1 cut(s) | 680 |
| BstUI | CGCG | 2 cut(s) | 144, 225 |
| BstV1I | GCAGC | 3 cut(s) | 388, 553, 571 |
| BstX2I | RGATCY | 2 cut(s) | 170, 658 |
| BstYI | RGATCY | 2 cut(s) | 170, 658 |
| Bsu15I | ATCGAT | 1 cut(s) | 309 |
| BsuRI | GGCC | 5 cut(s) | 74, 302, 425, 499, 802 |
| BsuTUI | ATCGAT | 1 cut(s) | 309 |
| BtsCI | GGATG | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 2 cut(s) | 782, 864 |
| Cac8I | GCNNGC | 2 cut(s) | 122, 346 |
| CaiI | CAGNNNCTG | 1 cut(s) | 121 |
| CciI | TCATGA | 3 cut(s) | 78, 978, 985 |
| CfoI | GCGC | 2 cut(s) | 225, 331 |
| Cfr13I | GGNCC | 4 cut(s) | 72, 73, 423, 916 |
| ClaI | ATCGAT | 1 cut(s) | 309 |
| CseI | GACGC | 3 cut(s) | 91, 407, 576 |
| Csp6I | GTAC | 7 cut(s) | 13, 190, 478, 626, 958, 1023, 1038 |
| CviAII | CATG | 7 cut(s) | 79, 448, 885, 947, 979, 986, 1041 |
| CviQI | GTAC | 7 cut(s) | 13, 190, 478, 626, 958, 1023, 1038 |
| DdeI | CTNAG | 2 cut(s) | 545, 636 |
| DpnI | GATC | 8 cut(s) | 98, 172, 429, 489, 654, 660, 821, 990 |
| DpnII | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| EaeI | YGGCCR | 1 cut(s) | 800 |
| Ecl136II | GAGCTC | 1 cut(s) | 436 |
| Eco105I | TACGTA | 1 cut(s) | 680 |
| Eco147I | AGGCCT | 2 cut(s) | 302, 499 |
| Eco24I | GRGCYC | 3 cut(s) | 76, 438, 818 |
| Eco31I | GGTCTC | 1 cut(s) | 864 |
| Eco47I | GGWCC | 1 cut(s) | 916 |
| Eco53kI | GAGCTC | 1 cut(s) | 436 |
| Eco57I | CTGAAG | 1 cut(s) | 758 |
| Eco72I | CACGTG | 1 cut(s) | 414 |
| Eco88I | CYCGRG | 1 cut(s) | 431 |
| EcoICRI | GAGCTC | 1 cut(s) | 436 |
| EcoO109I | RGGNCCY | 2 cut(s) | 72, 73 |
| EcoT38I | GRGCYC | 3 cut(s) | 76, 438, 818 |
| Esp3I | CGTCTC | 2 cut(s) | 225, 390 |
| FaeI | CATG | 7 cut(s) | 82, 451, 888, 950, 982, 989, 1044 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 657, 689, 729, 761, 756, 788 |
| FatI | CATG | 7 cut(s) | 78, 447, 884, 946, 978, 985, 1040 |
| FauI | CCCGC | 1 cut(s) | 381 |
| FbaI | TGATCA | 1 cut(s) | 988 |
| FblI | GTMKAC | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 3 cut(s) | 402, 542, 585 |
| FokI | GGATG | 1 cut(s) | 261 |
| FriOI | GRGCYC | 3 cut(s) | 76, 438, 818 |
| Fsp4HI | GCNGC | 3 cut(s) | 402, 542, 585 |
| FspBI | CTAG | 2 cut(s) | 288, 642 |
| GlaI | GCGC | 2 cut(s) | 224, 330 |
| GluI | GCNGC | 3 cut(s) | 402, 542, 585 |
| GsuI | CTGGAG | 2 cut(s) | 734, 888 |
| HaeII | RGCGCY | 1 cut(s) | 332 |
| HaeIII | GGCC | 5 cut(s) | 74, 302, 425, 499, 802 |
| HapII | CCGG | 6 cut(s) | 86, 132, 212, 335, 914, 1033 |
| HgaI | GACGC | 3 cut(s) | 91, 407, 576 |
| HhaI | GCGC | 2 cut(s) | 225, 331 |
| Hin1I | GRCGYC | 2 cut(s) | 83, 177 |
| Hin1II | CATG | 7 cut(s) | 82, 451, 888, 950, 982, 989, 1044 |
| Hin6I | GCGC | 2 cut(s) | 223, 329 |
| HinP1I | GCGC | 2 cut(s) | 223, 329 |
| HincII | GTYRAC | 1 cut(s) | 37 |
| HindII | GTYRAC | 1 cut(s) | 37 |
| HindIII | AAGCTT | 1 cut(s) | 743 |
| HinfI | GANTC | 4 cut(s) | 18, 91, 291, 982 |
| HpaII | CCGG | 6 cut(s) | 86, 132, 212, 335, 914, 1033 |
| HphI | GGTGA | 1 cut(s) | 626 |
| Hpy166II | GTNNAC | 4 cut(s) | 37, 411, 790, 1038 |
| Hpy188III | TCNNGA | 9 cut(s) | 79, 132, 335, 431, 523, 656, 914, 979, 986 |
| Hpy8I | GTNNAC | 4 cut(s) | 37, 411, 790, 1038 |
| Hpy99I | CGWCG | 5 cut(s) | 179, 182, 369, 443, 814 |
| HpyAV | CCTTC | 3 cut(s) | 313, 572, 745 |
| HpyCH4IV | ACGT | 3 cut(s) | 177, 413, 679 |
| HpyCH4V | TGCA | 2 cut(s) | 888, 928 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 62, 71, 257, 266, 555, 764 |
| HpyF3I | CTNAG | 2 cut(s) | 545, 636 |
| HpySE526I | ACGT | 3 cut(s) | 177, 413, 679 |
| Hsp92I | GRCGYC | 2 cut(s) | 83, 177 |
| Hsp92II | CATG | 7 cut(s) | 82, 451, 888, 950, 982, 989, 1044 |
| HspAI | GCGC | 2 cut(s) | 223, 329 |
| Kpn2I | TCCGGA | 3 cut(s) | 131, 334, 913 |
| Ksp22I | TGATCA | 1 cut(s) | 988 |
| Kzo9I | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| LmnI | GCTCC | 2 cut(s) | 134, 326 |
| Lsp1109I | GCAGC | 3 cut(s) | 388, 553, 571 |
| MaeI | CTAG | 2 cut(s) | 288, 642 |
| MaeII | ACGT | 3 cut(s) | 177, 413, 679 |
| MaeIII | GTNAC | 1 cut(s) | 692 |
| MalI | GATC | 8 cut(s) | 98, 172, 429, 489, 654, 660, 821, 990 |
| MboI | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| MboII | GAAGA | 5 cut(s) | 248, 662, 739, 742, 745 |
| MflI | RGATCY | 2 cut(s) | 170, 658 |
| MhlI | GDGCHC | 3 cut(s) | 76, 438, 818 |
| MlsI | TGGCCA | 1 cut(s) | 802 |
| MluCI | AATT | 3 cut(s) | 264, 617, 889 |
| MluNI | TGGCCA | 1 cut(s) | 802 |
| MlyI | GAGTC | 1 cut(s) | 285 |
| MmeI | TCCRAC | 2 cut(s) | 198, 388 |
| Mox20I | TGGCCA | 1 cut(s) | 802 |
| MroI | TCCGGA | 3 cut(s) | 131, 334, 913 |
| MscI | TGGCCA | 1 cut(s) | 802 |
| MseI | TTAA | 1 cut(s) | 1028 |
| Msp20I | TGGCCA | 1 cut(s) | 802 |
| MspA1I | CMGCKG | 3 cut(s) | 29, 56, 609 |
| MspI | CCGG | 6 cut(s) | 86, 132, 212, 335, 914, 1033 |
| Mva1269I | GAATGC | 1 cut(s) | 558 |
| MvnI | CGCG | 2 cut(s) | 144, 225 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 62, 71, 257, 266, 555, 764 |
| NdeII | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| NlaIII | CATG | 7 cut(s) | 82, 451, 888, 950, 982, 989, 1044 |
| NlaIV | GGNNCC | 7 cut(s) | 74, 156, 172, 210, 250, 424, 703 |
| NmeAIII | GCCGAG | 1 cut(s) | 185 |
| NmuCI | GTSAC | 1 cut(s) | 692 |
| NspI | RCATGY | 2 cut(s) | 888, 950 |
| NspV | TTCGAA | 1 cut(s) | 562 |
| PagI | TCATGA | 3 cut(s) | 78, 978, 985 |
| PceI | AGGCCT | 2 cut(s) | 302, 499 |
| PciI | ACATGT | 1 cut(s) | 946 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 174 |
| PctI | GAATGC | 1 cut(s) | 558 |
| PfeI | GAWTC | 3 cut(s) | 18, 91, 982 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 322 |
| PkrI | GCNGC | 3 cut(s) | 403, 543, 586 |
| PleI | GAGTC | 1 cut(s) | 285 |
| PmaCI | CACGTG | 1 cut(s) | 414 |
| PmlI | CACGTG | 1 cut(s) | 414 |
| PpsI | GAGTC | 1 cut(s) | 285 |
| Ppu21I | YACGTR | 2 cut(s) | 414, 680 |
| PscI | ACATGT | 1 cut(s) | 946 |
| Psp124BI | GAGCTC | 1 cut(s) | 438 |
| PspCI | CACGTG | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 7 cut(s) | 74, 156, 172, 210, 250, 424, 703 |
| PspOMI | GGGCCC | 1 cut(s) | 72 |
| PspPI | GGNCC | 4 cut(s) | 72, 73, 423, 916 |
| PstNI | CAGNNNCTG | 1 cut(s) | 121 |
| PsuI | RGATCY | 2 cut(s) | 170, 658 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| RsaI | GTAC | 7 cut(s) | 14, 191, 479, 627, 959, 1024, 1039 |
| RsaNI | GTAC | 7 cut(s) | 13, 190, 478, 626, 958, 1023, 1038 |
| SacI | GAGCTC | 1 cut(s) | 438 |
| SalI | GTCGAC | 1 cut(s) | 35 |
| SaqAI | TTAA | 1 cut(s) | 1028 |
| SatI | GCNGC | 3 cut(s) | 402, 542, 585 |
| Sau3AI | GATC | 8 cut(s) | 96, 170, 427, 487, 652, 658, 819, 988 |
| Sau96I | GGNCC | 4 cut(s) | 72, 73, 423, 916 |
| SchI | GAGTC | 1 cut(s) | 285 |
| SduI | GDGCHC | 3 cut(s) | 76, 438, 818 |
| SfuI | TTCGAA | 1 cut(s) | 562 |
| SinI | GGWCC | 1 cut(s) | 916 |
| SnaBI | TACGTA | 1 cut(s) | 680 |
| Sse9I | AATT | 3 cut(s) | 264, 617, 889 |
| SseBI | AGGCCT | 2 cut(s) | 302, 499 |
| SsiI | CCGC | 6 cut(s) | 29, 142, 225, 388, 556, 609 |
| SspMI | CTAG | 2 cut(s) | 288, 642 |
| SstI | GAGCTC | 1 cut(s) | 438 |
| StuI | AGGCCT | 2 cut(s) | 302, 499 |
| TaiI | ACGT | 3 cut(s) | 180, 416, 682 |
| TaqI | TCGA | 6 cut(s) | 36, 309, 438, 562, 655, 818 |
| TasI | AATT | 3 cut(s) | 264, 617, 889 |
| TatI | WGTACW | 4 cut(s) | 189, 477, 957, 1037 |
| TfiI | GAWTC | 3 cut(s) | 18, 91, 982 |
| Tru1I | TTAA | 1 cut(s) | 1028 |
| Tru9I | TTAA | 1 cut(s) | 1028 |
| TscAI | CASTG | 2 cut(s) | 782, 871 |
| TseFI | GTSAC | 1 cut(s) | 692 |
| TseI | GCWGC | 3 cut(s) | 401, 541, 584 |
| Tsp45I | GTSAC | 1 cut(s) | 692 |
| TspDTI | ATGAA | 5 cut(s) | 436, 522, 591, 834, 974 |
| TspGWI | ACGGA | 2 cut(s) | 30, 870 |
| TspRI | CASTG | 2 cut(s) | 782, 871 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 322 |
| VpaK11BI | GGWCC | 1 cut(s) | 916 |
| XceI | RCATGY | 2 cut(s) | 888, 950 |
| XmiI | GTMKAC | 1 cut(s) | 36 |
| XspI | CTAG | 2 cut(s) | 288, 642 |
| ZraI | GACGTC | 1 cut(s) | 178 |