pycom14g14800

ELK

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
17492722 .. 17500028
7307 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g14800.2

Sequence Viewer

Length: 1047 bp
ATGATGGAGGATCTGTACGGCCTCGCCGGCTCATCGTCAACGCCTTCAGCTGGTTTCAGCTCTGATCTATACTACTCTTCGTCAATGGCTGATATGCCTTTCTCGGCGAATACGACGGTTCCTGATCATCAGTTGGACTACTACTGCACCTACAGGAGCAGGAGCGCCAGCTTTGAGCCTTTAGCGGCGGCTTTGGGGGAGCAGCGGATACCCGGGACGATGAGACCGGACCAGATGTTTTCAGGGTCGTCGTCCGGAGTGTCGGACGCTGCTTCGGTGGTGGCTGCTGGGATTCAAAGACGAGGAGGAGGGGAAGGAGGTTGGGGAGAGGAGGTTTCTTGTCAAATGAATGAGATGATCGCTTCACATCCTCTATACCCTAAGCTTCTTCAAGCTTACATCGATTGCCAAAAGGTGGGGGCGCCGCCAGAAATAGCAAGTGTGTTGGACGAAATCCGGCCGCAAAGTGATCATCTAATTTCCAGGAGACCCACCGCTTCAACTTGCATGGCTACTGCCGATCCTGACCTCGATCTCTTCATGGAAAGTTACTGCGATATATTGTTCAAGTACAAATCGGATCTTACTAGGCCATTCGATGAAGCAATTACCTTCTTGAACAAGATGGAGACGCAGCTCAACGCGCTCGCCAATAATACCAACGATGCTGCTGGTTCATCAGACGAAGGAGACTGGAGTGGAGGAGAGATAGAGGCACAAGACTCTCCGCGGACAAATGAAGATCATGAGCTAAAGGATAAACTGTTGCGTAGATACAGTGGCTATATAAGCACTCTTAAACGTGAGTTTACCAAGAAGAAGAAGAATGGAAAGCTCCCGAGAGAAGCAAGGAAAATTCTCTTTGATTGGTGGAACCTTCACGATAAATGGCCTTACCCAACGGAAGCTGATAAAATTAGTCTTGCCCAAGTGACTCGACTGGATCAGAAACAAATAAACAATTGGTTTATAAATCAAAGGAAGCGCCATTGGAAGCCATCAGAGAACATGCAATATGCTGTTATGGACAGTCTTTGTGGACCATGA

Protein Analysis

349

Amino Acids

38.98

Weight (kDa)

5.21

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 971
AccB1I GGYRCC 1 cut(s) 421
AccB7I CCANNNNNTGG 1 cut(s) 415
AccII CGCG 2 cut(s) 644, 730
AccIII TCCGGA 1 cut(s) 254
AciI CCGC 8 cut(s) 185, 188, 205, 425, 461, 495, 728, 730
AclWI GGATC 4 cut(s) 18, 515, 588, 951
AcoI YGGCCR 1 cut(s) 458
AcsI RAATTY 1 cut(s) 855
AcuI CTGAAG 1 cut(s) 30
AcyI GRCGYC 1 cut(s) 422
AfaI GTAC 2 cut(s) 17, 572
AfiI CCNNNNNNNGG 2 cut(s) 50, 415
AgsI TTSAA 5 cut(s) 296, 392, 501, 568, 619
AjnI CCWGG 1 cut(s) 482
AluBI AGCT 9 cut(s) 50, 60, 171, 385, 395, 637, 751, 835, 908
AluI AGCT 9 cut(s) 50, 60, 171, 385, 395, 637, 751, 835, 908
Alw26I GTCTC 4 cut(s) 217, 481, 623, 684
AlwI GGATC 4 cut(s) 18, 515, 588, 951
Ama87I CYCGRG 2 cut(s) 212, 838
Aor13HI TCCGGA 1 cut(s) 254
AoxI GGCC 4 cut(s) 19, 458, 590, 890
ApeKI GCWGC 5 cut(s) 202, 269, 284, 634, 668
ApoI RAATTY 1 cut(s) 855
AspLEI GCGC 4 cut(s) 167, 424, 646, 987
AspS9I GGNCC 2 cut(s) 229, 1040
AsuC2I CCSGG 2 cut(s) 213, 214
AvaI CYCGRG 2 cut(s) 212, 838
AvaII GGWCC 2 cut(s) 229, 1040
BanI GGYRCC 1 cut(s) 421
BbvI GCAGC 5 cut(s) 214, 256, 271, 646, 655
BccI CCATC 2 cut(s) 619, 1006
BceAI ACGGC 1 cut(s) 34
BciT130I CCWGG 1 cut(s) 484
BciVI GTATCC 1 cut(s) 201
BclI TGATCA 2 cut(s) 124, 469
BcnI CCSGG 2 cut(s) 213, 214
BcoDI GTCTC 4 cut(s) 217, 481, 623, 684
BfaI CTAG 1 cut(s) 588
BfmI CTRYAG 1 cut(s) 151
BfoI RGCGCY 3 cut(s) 168, 425, 988
BfuI GTATCC 1 cut(s) 201
BglI GCCNNNNNGGC 1 cut(s) 27
BisI GCNGC 9 cut(s) 186, 189, 203, 270, 285, 425, 461, 635, 669
BlsI GCNGC 9 cut(s) 187, 190, 204, 271, 286, 426, 462, 636, 670
Bme1390I CCNGG 3 cut(s) 213, 214, 484
Bme18I GGWCC 2 cut(s) 229, 1040
BmeT110I CYCGRG 2 cut(s) 212, 838
BmgT120I GGNCC 2 cut(s) 229, 1040
BmiI GGNNCC 3 cut(s) 120, 423, 875
BmrFI CCNGG 3 cut(s) 213, 214, 484
BmsI GCATC 1 cut(s) 655
BpmI CTGGAG 1 cut(s) 715
Bpu10I CCTNAGC 1 cut(s) 381
BpuMI CCSGG 2 cut(s) 213, 214
Bsa29I ATCGAT 1 cut(s) 402
BsaHI GRCGYC 1 cut(s) 422
BsaI GGTCTC 2 cut(s) 217, 481
BsaJI CCNNGG 2 cut(s) 212, 728
BsaWI WCCGGW 2 cut(s) 226, 254
BsaXI ACNNNNNCTCC 3 cut(s) 29, 318, 348
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 415
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 2 cut(s) 698, 945
BseAI TCCGGA 1 cut(s) 254
BseBI CCWGG 1 cut(s) 484
BseCI ATCGAT 1 cut(s) 402
BseDI CCNNGG 2 cut(s) 212, 728
BseGI GGATG 1 cut(s) 367
BseLI CCNNNNNNNGG 2 cut(s) 50, 415
BseNI ACTGG 2 cut(s) 698, 945
BseRI GAGGAG 4 cut(s) 318, 321, 344, 717
BseX3I CGGCCG 1 cut(s) 458
BseXI GCAGC 5 cut(s) 214, 256, 271, 646, 655
BseYI CCCAGC 1 cut(s) 287
BsgI GTGCAG 1 cut(s) 130
Bsh1236I CGCG 2 cut(s) 644, 730
Bsh1285I CGRYCG 1 cut(s) 461
BshFI GGCC 4 cut(s) 21, 460, 592, 892
BshNI GGYRCC 1 cut(s) 421
BshVI ATCGAT 1 cut(s) 402
BsiEI CGRYCG 1 cut(s) 461
BsiHKCI CYCGRG 2 cut(s) 212, 838
BsiSI CCGG 5 cut(s) 27, 213, 227, 255, 457
BslFI GGGAC 1 cut(s) 229
BslI CCNNNNNNNGG 2 cut(s) 50, 415
BsmAI GTCTC 4 cut(s) 217, 481, 623, 684
BsmBI CGTCTC 1 cut(s) 623
BsmFI GGGAC 1 cut(s) 229
BsnI GGCC 4 cut(s) 21, 460, 592, 892
Bso31I GGTCTC 2 cut(s) 217, 481
BsoBI CYCGRG 2 cut(s) 212, 838
Bsp13I TCCGGA 1 cut(s) 254
BspACI CCGC 8 cut(s) 185, 188, 205, 425, 461, 495, 728, 730
BspANI GGCC 4 cut(s) 21, 460, 592, 892
BspDI ATCGAT 1 cut(s) 402
BspEI TCCGGA 1 cut(s) 254
BspFNI CGCG 2 cut(s) 644, 730
BspHI TCATGA 1 cut(s) 745
BspLI GGNNCC 3 cut(s) 120, 423, 875
BspPI GGATC 4 cut(s) 18, 515, 588, 951
BspT107I GGYRCC 1 cut(s) 421
BspTNI GGTCTC 2 cut(s) 217, 481
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 2 cut(s) 698, 945
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 2 cut(s) 212, 728
BssNI GRCGYC 1 cut(s) 422
Bst2UI CCWGG 1 cut(s) 484
Bst4CI ACNGT 4 cut(s) 118, 765, 779, 1031
Bst6I CTCTTC 2 cut(s) 82, 542
BstACI GRCGYC 1 cut(s) 422
BstC8I GCNNGC 3 cut(s) 28, 169, 648
BstDEI CTNAG 1 cut(s) 381
BstDSI CCRYGG 1 cut(s) 728
BstF5I GGATG 1 cut(s) 367
BstFNI CGCG 2 cut(s) 644, 730
BstH2I RGCGCY 3 cut(s) 168, 425, 988
BstHHI GCGC 4 cut(s) 167, 424, 646, 987
BstMAI GTCTC 4 cut(s) 217, 481, 623, 684
BstMCI CGRYCG 1 cut(s) 461
BstMWI GCNNNNNNNGC 3 cut(s) 27, 643, 789
BstNI CCWGG 1 cut(s) 484
BstNSI RCATGY 1 cut(s) 1012
BstSCI CCNGG 3 cut(s) 211, 212, 482
BstSFI CTRYAG 1 cut(s) 151
BstUI CGCG 2 cut(s) 644, 730
BstV1I GCAGC 5 cut(s) 214, 256, 271, 646, 655
BstX2I RGATCY 2 cut(s) 10, 580
BstYI RGATCY 2 cut(s) 10, 580
BstZI CGGCCG 1 cut(s) 458
Bsu15I ATCGAT 1 cut(s) 402
BsuI GTATCC 1 cut(s) 201
BsuRI GGCC 4 cut(s) 21, 460, 592, 892
BsuTUI ATCGAT 1 cut(s) 402
BtgI CCRYGG 1 cut(s) 728
BtsCI GGATG 1 cut(s) 367
BtsIMutI CAGTG 1 cut(s) 784
Cac8I GCNNGC 3 cut(s) 28, 169, 648
CciI TCATGA 1 cut(s) 745
CfoI GCGC 4 cut(s) 167, 424, 646, 987
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 229, 1040
Cfr42I CCGCGG 1 cut(s) 731
Cfr9I CCCGGG 1 cut(s) 212
ClaI ATCGAT 1 cut(s) 402
CseI GACGC 2 cut(s) 275, 640
Csp6I GTAC 2 cut(s) 16, 571
CviAII CATG 5 cut(s) 508, 541, 746, 1009, 1044
CviQI GTAC 2 cut(s) 16, 571
DdeI CTNAG 1 cut(s) 381
DinI GGCGCC 1 cut(s) 423
EaeI YGGCCR 1 cut(s) 458
EagI CGGCCG 1 cut(s) 458
Eam1104I CTCTTC 2 cut(s) 82, 542
EarI CTCTTC 2 cut(s) 82, 542
EclXI CGGCCG 1 cut(s) 458
Eco31I GGTCTC 2 cut(s) 217, 481
Eco47I GGWCC 2 cut(s) 229, 1040
Eco52I CGGCCG 1 cut(s) 458
Eco57I CTGAAG 1 cut(s) 30
Eco88I CYCGRG 2 cut(s) 212, 838
EcoRII CCWGG 1 cut(s) 482
EgeI GGCGCC 1 cut(s) 423
EheI GGCGCC 1 cut(s) 423
Esp3I CGTCTC 1 cut(s) 623
FaeI CATG 5 cut(s) 511, 544, 749, 1012, 1047
FaqI GGGAC 1 cut(s) 229
FatI CATG 5 cut(s) 507, 540, 745, 1008, 1043
FbaI TGATCA 2 cut(s) 124, 469
Fnu4HI GCNGC 9 cut(s) 186, 189, 203, 270, 285, 425, 461, 635, 669
FokI GGATG 1 cut(s) 354
Fsp4HI GCNGC 9 cut(s) 186, 189, 203, 270, 285, 425, 461, 635, 669
FspBI CTAG 1 cut(s) 588
GlaI GCGC 4 cut(s) 166, 423, 645, 986
GluI GCNGC 9 cut(s) 186, 189, 203, 270, 285, 425, 461, 635, 669
GsaI CCCAGC 1 cut(s) 291
GsuI CTGGAG 1 cut(s) 715
HaeII RGCGCY 3 cut(s) 168, 425, 988
HaeIII GGCC 4 cut(s) 21, 460, 592, 892
HapII CCGG 5 cut(s) 27, 213, 227, 255, 457
HgaI GACGC 2 cut(s) 275, 640
HhaI GCGC 4 cut(s) 167, 424, 646, 987
Hin1I GRCGYC 1 cut(s) 422
Hin1II CATG 5 cut(s) 511, 544, 749, 1012, 1047
Hin6I GCGC 4 cut(s) 165, 422, 644, 985
HinP1I GCGC 4 cut(s) 165, 422, 644, 985
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HindIII AAGCTT 2 cut(s) 383, 393
HinfI GANTC 3 cut(s) 292, 722, 934
HpaII CCGG 5 cut(s) 27, 213, 227, 255, 457
Hpy166II GTNNAC 3 cut(s) 39, 810, 1040
Hpy188I TCNGA 6 cut(s) 64, 265, 580, 682, 948, 1003
Hpy188III TCNNGA 7 cut(s) 122, 255, 524, 616, 746, 838, 881
Hpy8I GTNNAC 3 cut(s) 39, 810, 1040
Hpy99I CGWCG 2 cut(s) 118, 253
HpyAV CCTTC 5 cut(s) 54, 308, 622, 680, 887
HpyCH4III ACNGT 4 cut(s) 118, 765, 779, 1031
HpyCH4IV ACGT 1 cut(s) 802
HpyCH4V TGCA 3 cut(s) 147, 507, 1012
HpyF10VI GCNNNNNNNGC 3 cut(s) 27, 643, 789
HpyF3I CTNAG 1 cut(s) 381
HpySE526I ACGT 1 cut(s) 802
Hsp92I GRCGYC 1 cut(s) 422
Hsp92II CATG 5 cut(s) 511, 544, 749, 1012, 1047
HspAI GCGC 4 cut(s) 165, 422, 644, 985
KasI GGCGCC 1 cut(s) 421
Kpn2I TCCGGA 1 cut(s) 254
KroI GCCGGC 1 cut(s) 26
KroNI GCCGGC 1 cut(s) 28
Ksp22I TGATCA 2 cut(s) 124, 469
KspI CCGCGG 1 cut(s) 731
LmnI GCTCC 4 cut(s) 156, 162, 199, 840
Lsp1109I GCAGC 5 cut(s) 214, 256, 271, 646, 655
LweI GCATC 1 cut(s) 655
MaeI CTAG 1 cut(s) 588
MaeII ACGT 1 cut(s) 802
MaeIII GTNAC 2 cut(s) 548, 931
MboII GAAGA 7 cut(s) 69, 380, 529, 752, 829, 832, 835
MfeI CAATTG 1 cut(s) 961
MflI RGATCY 2 cut(s) 10, 580
MluCI AATT 5 cut(s) 477, 606, 855, 915, 961
Mly113I GGCGCC 1 cut(s) 422
MlyI GAGTC 2 cut(s) 716, 928
MmeI TCCRAC 3 cut(s) 114, 243, 426
MroI TCCGGA 1 cut(s) 254
MroNI GCCGGC 1 cut(s) 26
MseI TTAA 1 cut(s) 798
MspA1I CMGCKG 3 cut(s) 50, 205, 730
MspI CCGG 5 cut(s) 27, 213, 227, 255, 457
MspR9I CCNGG 3 cut(s) 213, 214, 484
MunI CAATTG 1 cut(s) 961
MvaI CCWGG 1 cut(s) 484
MvnI CGCG 2 cut(s) 644, 730
MwoI GCNNNNNNNGC 3 cut(s) 27, 643, 789
NaeI GCCGGC 1 cut(s) 28
NarI GGCGCC 1 cut(s) 422
NciI CCSGG 2 cut(s) 213, 214
NgoMIV GCCGGC 1 cut(s) 26
NlaIII CATG 5 cut(s) 511, 544, 749, 1012, 1047
NlaIV GGNNCC 3 cut(s) 120, 423, 875
NmeAIII GCCGAG 1 cut(s) 83
NmuCI GTSAC 1 cut(s) 931
NspI RCATGY 1 cut(s) 1012
PagI TCATGA 1 cut(s) 745
PcsI WCGNNNNNNNCGW 1 cut(s) 110
PdiI GCCGGC 1 cut(s) 28
PfeI GAWTC 1 cut(s) 292
PflMI CCANNNNNTGG 1 cut(s) 415
PfoI TCCNGGA 1 cut(s) 482
PkrI GCNGC 9 cut(s) 187, 190, 204, 271, 286, 426, 462, 636, 670
PleI GAGTC 2 cut(s) 716, 928
PluTI GGCGCC 1 cut(s) 425
PpsI GAGTC 2 cut(s) 716, 928
PsiI TTATAA 1 cut(s) 971
Psp6I CCWGG 1 cut(s) 482
PspFI CCCAGC 1 cut(s) 287
PspGI CCWGG 1 cut(s) 482
PspN4I GGNNCC 3 cut(s) 120, 423, 875
PspPI GGNCC 2 cut(s) 229, 1040
PsuI RGATCY 2 cut(s) 10, 580
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 2 cut(s) 17, 572
RsaNI GTAC 2 cut(s) 16, 571
SacII CCGCGG 1 cut(s) 731
SaqAI TTAA 1 cut(s) 798
SatI GCNGC 9 cut(s) 186, 189, 203, 270, 285, 425, 461, 635, 669
Sau96I GGNCC 2 cut(s) 229, 1040
SchI GAGTC 2 cut(s) 716, 928
ScrFI CCNGG 3 cut(s) 213, 214, 484
SfaNI GCATC 1 cut(s) 655
SfcI CTRYAG 1 cut(s) 151
SfoI GGCGCC 1 cut(s) 423
Sfr303I CCGCGG 1 cut(s) 731
SgrBI CCGCGG 1 cut(s) 731
SinI GGWCC 2 cut(s) 229, 1040
SmaI CCCGGG 1 cut(s) 214
Sse9I AATT 5 cut(s) 477, 606, 855, 915, 961
SsiI CCGC 8 cut(s) 185, 188, 205, 425, 461, 495, 728, 730
SspDI GGCGCC 1 cut(s) 421
SspMI CTAG 1 cut(s) 588
StyD4I CCNGG 3 cut(s) 211, 212, 482
TaaI ACNGT 4 cut(s) 118, 765, 779, 1031
TaiI ACGT 1 cut(s) 805
TaqI TCGA 4 cut(s) 402, 531, 597, 937
TasI AATT 5 cut(s) 477, 606, 855, 915, 961
TatI WGTACW 1 cut(s) 570
TauI GCSGC 4 cut(s) 188, 191, 427, 463
TfiI GAWTC 1 cut(s) 292
Tru1I TTAA 1 cut(s) 798
Tru9I TTAA 1 cut(s) 798
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 1 cut(s) 931
TseI GCWGC 5 cut(s) 202, 269, 284, 634, 668
Tsp45I GTSAC 1 cut(s) 931
TspDTI ATGAA 5 cut(s) 362, 529, 615, 666, 753
TspGWI ACGGA 1 cut(s) 917
TspMI CCCGGG 1 cut(s) 212
TspRI CASTG 1 cut(s) 784
Van91I CCANNNNNTGG 1 cut(s) 415
VpaK11BI GGWCC 2 cut(s) 229, 1040
XapI RAATTY 1 cut(s) 855
XceI RCATGY 1 cut(s) 1012
XmaI CCCGGG 1 cut(s) 212
XspI CTAG 1 cut(s) 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.