ELK
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23380 AT1G23380 AT1G70510 AT1G70510 |
| fragaria_vesca | FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_5g05530 FvH4_5g05530 |
| malus_domestica | MD06G1171700.v1.1 MD13G1095800.v1.1 MD14G1177200.v1.1 MD16G1097200.v1.1 |
| prunus_persica | Prupe.1G249600_v2.0.a1 Prupe.5G171100_v2.0.a1 |
| pyrus_communis | pycom06g15280 pycom13g08340 pycom14g14800 pycom16g08280 |
| rosa_chinensis | RchiOBHm_Chr4g0433571 RchiOBHm_Chr7g0193251 |
| rosa_laevigata | RLG00000004283 RLG00000006743 |
| rosa_multiflora | Rmu_sc0017266.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00262250 Rroxscaffold_5G00375060 |
| rosa_rugosa | Rorug04G0269800 Rorug07G0008500 Rorug07G0008600 |
| rosa_samantha | Rh4AG324700 Rh4BG332400 Rh4CG347700 Rh4DG328800 Rh7AG134100 Rh7BG135100 Rh7CG138100 Rh7DG136100 |
| rosa_wichuraiana | Rw4G028100 Rw7G011470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 971 |
| AccB1I | GGYRCC | 1 cut(s) | 421 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 415 |
| AccII | CGCG | 2 cut(s) | 644, 730 |
| AccIII | TCCGGA | 1 cut(s) | 254 |
| AciI | CCGC | 8 cut(s) | 185, 188, 205, 425, 461, 495, 728, 730 |
| AclWI | GGATC | 4 cut(s) | 18, 515, 588, 951 |
| AcoI | YGGCCR | 1 cut(s) | 458 |
| AcsI | RAATTY | 1 cut(s) | 855 |
| AcuI | CTGAAG | 1 cut(s) | 30 |
| AcyI | GRCGYC | 1 cut(s) | 422 |
| AfaI | GTAC | 2 cut(s) | 17, 572 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 415 |
| AgsI | TTSAA | 5 cut(s) | 296, 392, 501, 568, 619 |
| AjnI | CCWGG | 1 cut(s) | 482 |
| AluBI | AGCT | 9 cut(s) | 50, 60, 171, 385, 395, 637, 751, 835, 908 |
| AluI | AGCT | 9 cut(s) | 50, 60, 171, 385, 395, 637, 751, 835, 908 |
| Alw26I | GTCTC | 4 cut(s) | 217, 481, 623, 684 |
| AlwI | GGATC | 4 cut(s) | 18, 515, 588, 951 |
| Ama87I | CYCGRG | 2 cut(s) | 212, 838 |
| Aor13HI | TCCGGA | 1 cut(s) | 254 |
| AoxI | GGCC | 4 cut(s) | 19, 458, 590, 890 |
| ApeKI | GCWGC | 5 cut(s) | 202, 269, 284, 634, 668 |
| ApoI | RAATTY | 1 cut(s) | 855 |
| AspLEI | GCGC | 4 cut(s) | 167, 424, 646, 987 |
| AspS9I | GGNCC | 2 cut(s) | 229, 1040 |
| AsuC2I | CCSGG | 2 cut(s) | 213, 214 |
| AvaI | CYCGRG | 2 cut(s) | 212, 838 |
| AvaII | GGWCC | 2 cut(s) | 229, 1040 |
| BanI | GGYRCC | 1 cut(s) | 421 |
| BbvI | GCAGC | 5 cut(s) | 214, 256, 271, 646, 655 |
| BccI | CCATC | 2 cut(s) | 619, 1006 |
| BceAI | ACGGC | 1 cut(s) | 34 |
| BciT130I | CCWGG | 1 cut(s) | 484 |
| BciVI | GTATCC | 1 cut(s) | 201 |
| BclI | TGATCA | 2 cut(s) | 124, 469 |
| BcnI | CCSGG | 2 cut(s) | 213, 214 |
| BcoDI | GTCTC | 4 cut(s) | 217, 481, 623, 684 |
| BfaI | CTAG | 1 cut(s) | 588 |
| BfmI | CTRYAG | 1 cut(s) | 151 |
| BfoI | RGCGCY | 3 cut(s) | 168, 425, 988 |
| BfuI | GTATCC | 1 cut(s) | 201 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 27 |
| BisI | GCNGC | 9 cut(s) | 186, 189, 203, 270, 285, 425, 461, 635, 669 |
| BlsI | GCNGC | 9 cut(s) | 187, 190, 204, 271, 286, 426, 462, 636, 670 |
| Bme1390I | CCNGG | 3 cut(s) | 213, 214, 484 |
| Bme18I | GGWCC | 2 cut(s) | 229, 1040 |
| BmeT110I | CYCGRG | 2 cut(s) | 212, 838 |
| BmgT120I | GGNCC | 2 cut(s) | 229, 1040 |
| BmiI | GGNNCC | 3 cut(s) | 120, 423, 875 |
| BmrFI | CCNGG | 3 cut(s) | 213, 214, 484 |
| BmsI | GCATC | 1 cut(s) | 655 |
| BpmI | CTGGAG | 1 cut(s) | 715 |
| Bpu10I | CCTNAGC | 1 cut(s) | 381 |
| BpuMI | CCSGG | 2 cut(s) | 213, 214 |
| Bsa29I | ATCGAT | 1 cut(s) | 402 |
| BsaHI | GRCGYC | 1 cut(s) | 422 |
| BsaI | GGTCTC | 2 cut(s) | 217, 481 |
| BsaJI | CCNNGG | 2 cut(s) | 212, 728 |
| BsaWI | WCCGGW | 2 cut(s) | 226, 254 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 29, 318, 348 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 415 |
| Bse118I | RCCGGY | 1 cut(s) | 26 |
| Bse1I | ACTGG | 2 cut(s) | 698, 945 |
| BseAI | TCCGGA | 1 cut(s) | 254 |
| BseBI | CCWGG | 1 cut(s) | 484 |
| BseCI | ATCGAT | 1 cut(s) | 402 |
| BseDI | CCNNGG | 2 cut(s) | 212, 728 |
| BseGI | GGATG | 1 cut(s) | 367 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 415 |
| BseNI | ACTGG | 2 cut(s) | 698, 945 |
| BseRI | GAGGAG | 4 cut(s) | 318, 321, 344, 717 |
| BseX3I | CGGCCG | 1 cut(s) | 458 |
| BseXI | GCAGC | 5 cut(s) | 214, 256, 271, 646, 655 |
| BseYI | CCCAGC | 1 cut(s) | 287 |
| BsgI | GTGCAG | 1 cut(s) | 130 |
| Bsh1236I | CGCG | 2 cut(s) | 644, 730 |
| Bsh1285I | CGRYCG | 1 cut(s) | 461 |
| BshFI | GGCC | 4 cut(s) | 21, 460, 592, 892 |
| BshNI | GGYRCC | 1 cut(s) | 421 |
| BshVI | ATCGAT | 1 cut(s) | 402 |
| BsiEI | CGRYCG | 1 cut(s) | 461 |
| BsiHKCI | CYCGRG | 2 cut(s) | 212, 838 |
| BsiSI | CCGG | 5 cut(s) | 27, 213, 227, 255, 457 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 415 |
| BsmAI | GTCTC | 4 cut(s) | 217, 481, 623, 684 |
| BsmBI | CGTCTC | 1 cut(s) | 623 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| BsnI | GGCC | 4 cut(s) | 21, 460, 592, 892 |
| Bso31I | GGTCTC | 2 cut(s) | 217, 481 |
| BsoBI | CYCGRG | 2 cut(s) | 212, 838 |
| Bsp13I | TCCGGA | 1 cut(s) | 254 |
| BspACI | CCGC | 8 cut(s) | 185, 188, 205, 425, 461, 495, 728, 730 |
| BspANI | GGCC | 4 cut(s) | 21, 460, 592, 892 |
| BspDI | ATCGAT | 1 cut(s) | 402 |
| BspEI | TCCGGA | 1 cut(s) | 254 |
| BspFNI | CGCG | 2 cut(s) | 644, 730 |
| BspHI | TCATGA | 1 cut(s) | 745 |
| BspLI | GGNNCC | 3 cut(s) | 120, 423, 875 |
| BspPI | GGATC | 4 cut(s) | 18, 515, 588, 951 |
| BspT107I | GGYRCC | 1 cut(s) | 421 |
| BspTNI | GGTCTC | 2 cut(s) | 217, 481 |
| BsrFI | RCCGGY | 1 cut(s) | 26 |
| BsrI | ACTGG | 2 cut(s) | 698, 945 |
| BssAI | RCCGGY | 1 cut(s) | 26 |
| BssECI | CCNNGG | 2 cut(s) | 212, 728 |
| BssNI | GRCGYC | 1 cut(s) | 422 |
| Bst2UI | CCWGG | 1 cut(s) | 484 |
| Bst4CI | ACNGT | 4 cut(s) | 118, 765, 779, 1031 |
| Bst6I | CTCTTC | 2 cut(s) | 82, 542 |
| BstACI | GRCGYC | 1 cut(s) | 422 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 169, 648 |
| BstDEI | CTNAG | 1 cut(s) | 381 |
| BstDSI | CCRYGG | 1 cut(s) | 728 |
| BstF5I | GGATG | 1 cut(s) | 367 |
| BstFNI | CGCG | 2 cut(s) | 644, 730 |
| BstH2I | RGCGCY | 3 cut(s) | 168, 425, 988 |
| BstHHI | GCGC | 4 cut(s) | 167, 424, 646, 987 |
| BstMAI | GTCTC | 4 cut(s) | 217, 481, 623, 684 |
| BstMCI | CGRYCG | 1 cut(s) | 461 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 27, 643, 789 |
| BstNI | CCWGG | 1 cut(s) | 484 |
| BstNSI | RCATGY | 1 cut(s) | 1012 |
| BstSCI | CCNGG | 3 cut(s) | 211, 212, 482 |
| BstSFI | CTRYAG | 1 cut(s) | 151 |
| BstUI | CGCG | 2 cut(s) | 644, 730 |
| BstV1I | GCAGC | 5 cut(s) | 214, 256, 271, 646, 655 |
| BstX2I | RGATCY | 2 cut(s) | 10, 580 |
| BstYI | RGATCY | 2 cut(s) | 10, 580 |
| BstZI | CGGCCG | 1 cut(s) | 458 |
| Bsu15I | ATCGAT | 1 cut(s) | 402 |
| BsuI | GTATCC | 1 cut(s) | 201 |
| BsuRI | GGCC | 4 cut(s) | 21, 460, 592, 892 |
| BsuTUI | ATCGAT | 1 cut(s) | 402 |
| BtgI | CCRYGG | 1 cut(s) | 728 |
| BtsCI | GGATG | 1 cut(s) | 367 |
| BtsIMutI | CAGTG | 1 cut(s) | 784 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 169, 648 |
| CciI | TCATGA | 1 cut(s) | 745 |
| CfoI | GCGC | 4 cut(s) | 167, 424, 646, 987 |
| Cfr10I | RCCGGY | 1 cut(s) | 26 |
| Cfr13I | GGNCC | 2 cut(s) | 229, 1040 |
| Cfr42I | CCGCGG | 1 cut(s) | 731 |
| Cfr9I | CCCGGG | 1 cut(s) | 212 |
| ClaI | ATCGAT | 1 cut(s) | 402 |
| CseI | GACGC | 2 cut(s) | 275, 640 |
| Csp6I | GTAC | 2 cut(s) | 16, 571 |
| CviAII | CATG | 5 cut(s) | 508, 541, 746, 1009, 1044 |
| CviQI | GTAC | 2 cut(s) | 16, 571 |
| DdeI | CTNAG | 1 cut(s) | 381 |
| DinI | GGCGCC | 1 cut(s) | 423 |
| EaeI | YGGCCR | 1 cut(s) | 458 |
| EagI | CGGCCG | 1 cut(s) | 458 |
| Eam1104I | CTCTTC | 2 cut(s) | 82, 542 |
| EarI | CTCTTC | 2 cut(s) | 82, 542 |
| EclXI | CGGCCG | 1 cut(s) | 458 |
| Eco31I | GGTCTC | 2 cut(s) | 217, 481 |
| Eco47I | GGWCC | 2 cut(s) | 229, 1040 |
| Eco52I | CGGCCG | 1 cut(s) | 458 |
| Eco57I | CTGAAG | 1 cut(s) | 30 |
| Eco88I | CYCGRG | 2 cut(s) | 212, 838 |
| EcoRII | CCWGG | 1 cut(s) | 482 |
| EgeI | GGCGCC | 1 cut(s) | 423 |
| EheI | GGCGCC | 1 cut(s) | 423 |
| Esp3I | CGTCTC | 1 cut(s) | 623 |
| FaeI | CATG | 5 cut(s) | 511, 544, 749, 1012, 1047 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| FatI | CATG | 5 cut(s) | 507, 540, 745, 1008, 1043 |
| FbaI | TGATCA | 2 cut(s) | 124, 469 |
| Fnu4HI | GCNGC | 9 cut(s) | 186, 189, 203, 270, 285, 425, 461, 635, 669 |
| FokI | GGATG | 1 cut(s) | 354 |
| Fsp4HI | GCNGC | 9 cut(s) | 186, 189, 203, 270, 285, 425, 461, 635, 669 |
| FspBI | CTAG | 1 cut(s) | 588 |
| GlaI | GCGC | 4 cut(s) | 166, 423, 645, 986 |
| GluI | GCNGC | 9 cut(s) | 186, 189, 203, 270, 285, 425, 461, 635, 669 |
| GsaI | CCCAGC | 1 cut(s) | 291 |
| GsuI | CTGGAG | 1 cut(s) | 715 |
| HaeII | RGCGCY | 3 cut(s) | 168, 425, 988 |
| HaeIII | GGCC | 4 cut(s) | 21, 460, 592, 892 |
| HapII | CCGG | 5 cut(s) | 27, 213, 227, 255, 457 |
| HgaI | GACGC | 2 cut(s) | 275, 640 |
| HhaI | GCGC | 4 cut(s) | 167, 424, 646, 987 |
| Hin1I | GRCGYC | 1 cut(s) | 422 |
| Hin1II | CATG | 5 cut(s) | 511, 544, 749, 1012, 1047 |
| Hin6I | GCGC | 4 cut(s) | 165, 422, 644, 985 |
| HinP1I | GCGC | 4 cut(s) | 165, 422, 644, 985 |
| HincII | GTYRAC | 1 cut(s) | 39 |
| HindII | GTYRAC | 1 cut(s) | 39 |
| HindIII | AAGCTT | 2 cut(s) | 383, 393 |
| HinfI | GANTC | 3 cut(s) | 292, 722, 934 |
| HpaII | CCGG | 5 cut(s) | 27, 213, 227, 255, 457 |
| Hpy166II | GTNNAC | 3 cut(s) | 39, 810, 1040 |
| Hpy188I | TCNGA | 6 cut(s) | 64, 265, 580, 682, 948, 1003 |
| Hpy188III | TCNNGA | 7 cut(s) | 122, 255, 524, 616, 746, 838, 881 |
| Hpy8I | GTNNAC | 3 cut(s) | 39, 810, 1040 |
| Hpy99I | CGWCG | 2 cut(s) | 118, 253 |
| HpyAV | CCTTC | 5 cut(s) | 54, 308, 622, 680, 887 |
| HpyCH4III | ACNGT | 4 cut(s) | 118, 765, 779, 1031 |
| HpyCH4IV | ACGT | 1 cut(s) | 802 |
| HpyCH4V | TGCA | 3 cut(s) | 147, 507, 1012 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 27, 643, 789 |
| HpyF3I | CTNAG | 1 cut(s) | 381 |
| HpySE526I | ACGT | 1 cut(s) | 802 |
| Hsp92I | GRCGYC | 1 cut(s) | 422 |
| Hsp92II | CATG | 5 cut(s) | 511, 544, 749, 1012, 1047 |
| HspAI | GCGC | 4 cut(s) | 165, 422, 644, 985 |
| KasI | GGCGCC | 1 cut(s) | 421 |
| Kpn2I | TCCGGA | 1 cut(s) | 254 |
| KroI | GCCGGC | 1 cut(s) | 26 |
| KroNI | GCCGGC | 1 cut(s) | 28 |
| Ksp22I | TGATCA | 2 cut(s) | 124, 469 |
| KspI | CCGCGG | 1 cut(s) | 731 |
| LmnI | GCTCC | 4 cut(s) | 156, 162, 199, 840 |
| Lsp1109I | GCAGC | 5 cut(s) | 214, 256, 271, 646, 655 |
| LweI | GCATC | 1 cut(s) | 655 |
| MaeI | CTAG | 1 cut(s) | 588 |
| MaeII | ACGT | 1 cut(s) | 802 |
| MaeIII | GTNAC | 2 cut(s) | 548, 931 |
| MboII | GAAGA | 7 cut(s) | 69, 380, 529, 752, 829, 832, 835 |
| MfeI | CAATTG | 1 cut(s) | 961 |
| MflI | RGATCY | 2 cut(s) | 10, 580 |
| MluCI | AATT | 5 cut(s) | 477, 606, 855, 915, 961 |
| Mly113I | GGCGCC | 1 cut(s) | 422 |
| MlyI | GAGTC | 2 cut(s) | 716, 928 |
| MmeI | TCCRAC | 3 cut(s) | 114, 243, 426 |
| MroI | TCCGGA | 1 cut(s) | 254 |
| MroNI | GCCGGC | 1 cut(s) | 26 |
| MseI | TTAA | 1 cut(s) | 798 |
| MspA1I | CMGCKG | 3 cut(s) | 50, 205, 730 |
| MspI | CCGG | 5 cut(s) | 27, 213, 227, 255, 457 |
| MspR9I | CCNGG | 3 cut(s) | 213, 214, 484 |
| MunI | CAATTG | 1 cut(s) | 961 |
| MvaI | CCWGG | 1 cut(s) | 484 |
| MvnI | CGCG | 2 cut(s) | 644, 730 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 27, 643, 789 |
| NaeI | GCCGGC | 1 cut(s) | 28 |
| NarI | GGCGCC | 1 cut(s) | 422 |
| NciI | CCSGG | 2 cut(s) | 213, 214 |
| NgoMIV | GCCGGC | 1 cut(s) | 26 |
| NlaIII | CATG | 5 cut(s) | 511, 544, 749, 1012, 1047 |
| NlaIV | GGNNCC | 3 cut(s) | 120, 423, 875 |
| NmeAIII | GCCGAG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 1 cut(s) | 931 |
| NspI | RCATGY | 1 cut(s) | 1012 |
| PagI | TCATGA | 1 cut(s) | 745 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 110 |
| PdiI | GCCGGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 292 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 415 |
| PfoI | TCCNGGA | 1 cut(s) | 482 |
| PkrI | GCNGC | 9 cut(s) | 187, 190, 204, 271, 286, 426, 462, 636, 670 |
| PleI | GAGTC | 2 cut(s) | 716, 928 |
| PluTI | GGCGCC | 1 cut(s) | 425 |
| PpsI | GAGTC | 2 cut(s) | 716, 928 |
| PsiI | TTATAA | 1 cut(s) | 971 |
| Psp6I | CCWGG | 1 cut(s) | 482 |
| PspFI | CCCAGC | 1 cut(s) | 287 |
| PspGI | CCWGG | 1 cut(s) | 482 |
| PspN4I | GGNNCC | 3 cut(s) | 120, 423, 875 |
| PspPI | GGNCC | 2 cut(s) | 229, 1040 |
| PsuI | RGATCY | 2 cut(s) | 10, 580 |
| PvuII | CAGCTG | 1 cut(s) | 50 |
| RsaI | GTAC | 2 cut(s) | 17, 572 |
| RsaNI | GTAC | 2 cut(s) | 16, 571 |
| SacII | CCGCGG | 1 cut(s) | 731 |
| SaqAI | TTAA | 1 cut(s) | 798 |
| SatI | GCNGC | 9 cut(s) | 186, 189, 203, 270, 285, 425, 461, 635, 669 |
| Sau96I | GGNCC | 2 cut(s) | 229, 1040 |
| SchI | GAGTC | 2 cut(s) | 716, 928 |
| ScrFI | CCNGG | 3 cut(s) | 213, 214, 484 |
| SfaNI | GCATC | 1 cut(s) | 655 |
| SfcI | CTRYAG | 1 cut(s) | 151 |
| SfoI | GGCGCC | 1 cut(s) | 423 |
| Sfr303I | CCGCGG | 1 cut(s) | 731 |
| SgrBI | CCGCGG | 1 cut(s) | 731 |
| SinI | GGWCC | 2 cut(s) | 229, 1040 |
| SmaI | CCCGGG | 1 cut(s) | 214 |
| Sse9I | AATT | 5 cut(s) | 477, 606, 855, 915, 961 |
| SsiI | CCGC | 8 cut(s) | 185, 188, 205, 425, 461, 495, 728, 730 |
| SspDI | GGCGCC | 1 cut(s) | 421 |
| SspMI | CTAG | 1 cut(s) | 588 |
| StyD4I | CCNGG | 3 cut(s) | 211, 212, 482 |
| TaaI | ACNGT | 4 cut(s) | 118, 765, 779, 1031 |
| TaiI | ACGT | 1 cut(s) | 805 |
| TaqI | TCGA | 4 cut(s) | 402, 531, 597, 937 |
| TasI | AATT | 5 cut(s) | 477, 606, 855, 915, 961 |
| TatI | WGTACW | 1 cut(s) | 570 |
| TauI | GCSGC | 4 cut(s) | 188, 191, 427, 463 |
| TfiI | GAWTC | 1 cut(s) | 292 |
| Tru1I | TTAA | 1 cut(s) | 798 |
| Tru9I | TTAA | 1 cut(s) | 798 |
| TscAI | CASTG | 1 cut(s) | 784 |
| TseFI | GTSAC | 1 cut(s) | 931 |
| TseI | GCWGC | 5 cut(s) | 202, 269, 284, 634, 668 |
| Tsp45I | GTSAC | 1 cut(s) | 931 |
| TspDTI | ATGAA | 5 cut(s) | 362, 529, 615, 666, 753 |
| TspGWI | ACGGA | 1 cut(s) | 917 |
| TspMI | CCCGGG | 1 cut(s) | 212 |
| TspRI | CASTG | 1 cut(s) | 784 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 415 |
| VpaK11BI | GGWCC | 2 cut(s) | 229, 1040 |
| XapI | RAATTY | 1 cut(s) | 855 |
| XceI | RCATGY | 1 cut(s) | 1012 |
| XmaI | CCCGGG | 1 cut(s) | 212 |
| XspI | CTAG | 1 cut(s) | 588 |