Homeobox protein knotted-1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23380 AT1G23380 AT1G70510 AT1G70510 |
| fragaria_vesca | FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_5g05530 FvH4_5g05530 |
| malus_domestica | MD06G1171700.v1.1 MD13G1095800.v1.1 MD14G1177200.v1.1 MD16G1097200.v1.1 |
| prunus_persica | Prupe.1G249600_v2.0.a1 Prupe.5G171100_v2.0.a1 |
| pyrus_communis | pycom06g15280 pycom13g08340 pycom14g14800 pycom16g08280 |
| rosa_chinensis | RchiOBHm_Chr4g0433571 RchiOBHm_Chr7g0193251 |
| rosa_laevigata | RLG00000004283 RLG00000006743 |
| rosa_multiflora | Rmu_sc0017266.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00262250 Rroxscaffold_5G00375060 |
| rosa_rugosa | Rorug04G0269800 Rorug07G0008500 Rorug07G0008600 |
| rosa_samantha | Rh4AG324700 Rh4BG332400 Rh4CG347700 Rh4DG328800 Rh7AG134100 Rh7BG135100 Rh7CG138100 Rh7DG136100 |
| rosa_wichuraiana | Rw4G028100 Rw7G011470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 882 |
| AccB1I | GGYRCC | 1 cut(s) | 361 |
| AccII | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| AciI | CCGC | 5 cut(s) | 116, 157, 365, 696, 702 |
| AclI | AACGTT | 1 cut(s) | 854 |
| AclWI | GGATC | 3 cut(s) | 208, 476, 762 |
| AcoI | YGGCCR | 1 cut(s) | 921 |
| AcsI | RAATTY | 2 cut(s) | 392, 803 |
| AcyI | GRCGYC | 2 cut(s) | 95, 362 |
| AfaI | GTAC | 7 cut(s) | 14, 71, 221, 317, 416, 533, 874 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 39 |
| AflIII | ACRYGT | 1 cut(s) | 467 |
| AgsI | TTSAA | 2 cut(s) | 56, 796 |
| AjnI | CCWGG | 1 cut(s) | 548 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 179, 211 |
| AluBI | AGCT | 4 cut(s) | 239, 490, 799, 832 |
| AluI | AGCT | 4 cut(s) | 239, 490, 799, 832 |
| Alw21I | GWGCWC | 2 cut(s) | 165, 492 |
| Alw26I | GTCTC | 1 cut(s) | 985 |
| AlwI | GGATC | 3 cut(s) | 208, 476, 762 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 239 |
| Ama87I | CYCGRG | 1 cut(s) | 485 |
| AoxI | GGCC | 3 cut(s) | 551, 887, 921 |
| ApeKI | GCWGC | 3 cut(s) | 227, 239, 832 |
| ApoI | RAATTY | 2 cut(s) | 392, 803 |
| AseI | ATTAAT | 1 cut(s) | 969 |
| AspA2I | CCTAGG | 1 cut(s) | 320 |
| AspLEI | GCGC | 3 cut(s) | 259, 284, 364 |
| AspS9I | GGNCC | 2 cut(s) | 888, 1037 |
| AsuHPI | GGTGA | 4 cut(s) | 161, 538, 746, 1030 |
| AvaI | CYCGRG | 1 cut(s) | 485 |
| AvaII | GGWCC | 1 cut(s) | 1037 |
| AvrII | CCTAGG | 1 cut(s) | 320 |
| BanI | GGYRCC | 1 cut(s) | 361 |
| BanII | GRGCYC | 1 cut(s) | 492 |
| Bbv12I | GWGCWC | 2 cut(s) | 165, 492 |
| BbvI | GCAGC | 3 cut(s) | 226, 239, 819 |
| BccI | CCATC | 3 cut(s) | 293, 1003, 1015 |
| BceAI | ACGGC | 1 cut(s) | 424 |
| BciT130I | CCWGG | 1 cut(s) | 550 |
| BcoDI | GTCTC | 1 cut(s) | 985 |
| BfaI | CTAG | 3 cut(s) | 321, 447, 938 |
| BfoI | RGCGCY | 2 cut(s) | 285, 365 |
| BglII | AGATCT | 2 cut(s) | 541, 745 |
| BisI | GCNGC | 5 cut(s) | 116, 228, 240, 365, 833 |
| BlnI | CCTAGG | 1 cut(s) | 320 |
| BlsI | GCNGC | 5 cut(s) | 117, 229, 241, 366, 834 |
| Bme1390I | CCNGG | 1 cut(s) | 550 |
| Bme18I | GGWCC | 1 cut(s) | 1037 |
| BmeT110I | CYCGRG | 1 cut(s) | 485 |
| BmgT120I | GGNCC | 2 cut(s) | 888, 1037 |
| BmiI | GGNNCC | 2 cut(s) | 363, 478 |
| BmrFI | CCNGG | 1 cut(s) | 550 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BpmI | CTGGAG | 1 cut(s) | 1009 |
| BpuEI | CTTGAG | 1 cut(s) | 734 |
| BsaBI | GATNNNNATC | 2 cut(s) | 22, 744 |
| BsaHI | GRCGYC | 2 cut(s) | 95, 362 |
| BsaI | GGTCTC | 1 cut(s) | 985 |
| BsaJI | CCNNGG | 1 cut(s) | 320 |
| BsaWI | WCCGGW | 1 cut(s) | 1034 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 26, 179, 209 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 39 |
| Bse1I | ACTGG | 3 cut(s) | 924, 965, 992 |
| Bse8I | GATNNNNATC | 2 cut(s) | 22, 744 |
| BseBI | CCWGG | 1 cut(s) | 550 |
| BseDI | CCNNGG | 1 cut(s) | 320 |
| BseGI | GGATG | 2 cut(s) | 307, 688 |
| BseJI | GATNNNNATC | 2 cut(s) | 22, 744 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 39 |
| BseMII | CTCAG | 1 cut(s) | 799 |
| BseNI | ACTGG | 3 cut(s) | 924, 965, 992 |
| BseRI | GAGGAG | 1 cut(s) | 281 |
| BseXI | GCAGC | 3 cut(s) | 226, 239, 819 |
| BsgI | GTGCAG | 3 cut(s) | 122, 595, 734 |
| Bsh1236I | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| BshFI | GGCC | 3 cut(s) | 553, 889, 923 |
| BshNI | GGYRCC | 1 cut(s) | 361 |
| BsiHKAI | GWGCWC | 2 cut(s) | 165, 492 |
| BsiHKCI | CYCGRG | 1 cut(s) | 485 |
| BsiSI | CCGG | 2 cut(s) | 98, 1035 |
| BslFI | GGGAC | 1 cut(s) | 56 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 39 |
| BsmAI | GTCTC | 1 cut(s) | 985 |
| BsmFI | GGGAC | 1 cut(s) | 56 |
| BsnI | GGCC | 3 cut(s) | 553, 889, 923 |
| Bso31I | GGTCTC | 1 cut(s) | 985 |
| BsoBI | CYCGRG | 1 cut(s) | 485 |
| Bsp1286I | GDGCHC | 2 cut(s) | 165, 492 |
| Bsp1407I | TGTACA | 1 cut(s) | 414 |
| Bsp143I | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| BspACI | CCGC | 5 cut(s) | 116, 157, 365, 696, 702 |
| BspANI | GGCC | 3 cut(s) | 553, 889, 923 |
| BspCNI | CTCAG | 1 cut(s) | 798 |
| BspFNI | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| BspLI | GGNNCC | 2 cut(s) | 363, 478 |
| BspPI | GGATC | 3 cut(s) | 208, 476, 762 |
| BspT107I | GGYRCC | 1 cut(s) | 361 |
| BspTNI | GGTCTC | 1 cut(s) | 985 |
| BsrGI | TGTACA | 1 cut(s) | 414 |
| BsrI | ACTGG | 3 cut(s) | 924, 965, 992 |
| BssECI | CCNNGG | 1 cut(s) | 320 |
| BssMI | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| BssNI | GRCGYC | 2 cut(s) | 95, 362 |
| BssT1I | CCWWGG | 1 cut(s) | 320 |
| Bst2UI | CCWGG | 1 cut(s) | 550 |
| Bst6I | CTCTTC | 1 cut(s) | 640 |
| BstACI | GRCGYC | 2 cut(s) | 95, 362 |
| BstAUI | TGTACA | 1 cut(s) | 414 |
| BstC8I | GCNNGC | 1 cut(s) | 161 |
| BstDEI | CTNAG | 1 cut(s) | 785 |
| BstF5I | GGATG | 2 cut(s) | 307, 688 |
| BstFNI | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| BstH2I | RGCGCY | 2 cut(s) | 285, 365 |
| BstHHI | GCGC | 3 cut(s) | 259, 284, 364 |
| BstKTI | GATC | 8 cut(s) | 203, 484, 544, 588, 742, 748, 757, 943 |
| BstMAI | GTCTC | 1 cut(s) | 985 |
| BstMBI | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 236 |
| BstNI | CCWGG | 1 cut(s) | 550 |
| BstNSI | RCATGY | 3 cut(s) | 471, 676, 1009 |
| BstSCI | CCNGG | 1 cut(s) | 548 |
| BstUI | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| BstV1I | GCAGC | 3 cut(s) | 226, 239, 819 |
| BstX2I | RGATCY | 2 cut(s) | 541, 745 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 356, 472 |
| BstYI | RGATCY | 2 cut(s) | 541, 745 |
| BsuRI | GGCC | 3 cut(s) | 553, 889, 923 |
| BtgZI | GCGATG | 2 cut(s) | 206, 672 |
| BtsCI | GGATG | 2 cut(s) | 307, 688 |
| BtsIMutI | CAGTG | 2 cut(s) | 917, 985 |
| Cac8I | GCNNGC | 1 cut(s) | 161 |
| CaiI | CAGNNNCTG | 1 cut(s) | 239 |
| CfoI | GCGC | 3 cut(s) | 259, 284, 364 |
| Cfr13I | GGNCC | 2 cut(s) | 888, 1037 |
| CseI | GACGC | 4 cut(s) | 103, 219, 291, 971 |
| Csp6I | GTAC | 7 cut(s) | 13, 70, 220, 316, 415, 532, 873 |
| CviAII | CATG | 6 cut(s) | 438, 468, 502, 629, 673, 1006 |
| CviQI | GTAC | 7 cut(s) | 13, 70, 220, 316, 415, 532, 873 |
| DdeI | CTNAG | 1 cut(s) | 785 |
| DinI | GGCGCC | 1 cut(s) | 363 |
| DpnI | GATC | 8 cut(s) | 202, 483, 543, 587, 741, 747, 756, 942 |
| DpnII | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| EaeI | YGGCCR | 1 cut(s) | 921 |
| Eam1104I | CTCTTC | 1 cut(s) | 640 |
| EarI | CTCTTC | 1 cut(s) | 640 |
| EciI | GGCGGA | 1 cut(s) | 717 |
| Ecl136II | GAGCTC | 1 cut(s) | 490 |
| Eco130I | CCWWGG | 1 cut(s) | 320 |
| Eco147I | AGGCCT | 1 cut(s) | 553 |
| Eco24I | GRGCYC | 1 cut(s) | 492 |
| Eco31I | GGTCTC | 1 cut(s) | 985 |
| Eco47I | GGWCC | 1 cut(s) | 1037 |
| Eco53kI | GAGCTC | 1 cut(s) | 490 |
| Eco88I | CYCGRG | 1 cut(s) | 485 |
| EcoICRI | GAGCTC | 1 cut(s) | 490 |
| EcoRI | GAATTC | 2 cut(s) | 392, 803 |
| EcoRII | CCWGG | 1 cut(s) | 548 |
| EcoT14I | CCWWGG | 1 cut(s) | 320 |
| EcoT38I | GRGCYC | 1 cut(s) | 492 |
| EgeI | GGCGCC | 1 cut(s) | 363 |
| EheI | GGCGCC | 1 cut(s) | 363 |
| ErhI | CCWWGG | 1 cut(s) | 320 |
| FaeI | CATG | 6 cut(s) | 441, 471, 505, 632, 676, 1009 |
| FaqI | GGGAC | 1 cut(s) | 56 |
| FatI | CATG | 6 cut(s) | 437, 467, 501, 628, 672, 1005 |
| Fnu4HI | GCNGC | 5 cut(s) | 116, 228, 240, 365, 833 |
| FokI | GGATG | 2 cut(s) | 294, 695 |
| FriOI | GRGCYC | 1 cut(s) | 492 |
| Fsp4HI | GCNGC | 5 cut(s) | 116, 228, 240, 365, 833 |
| FspBI | CTAG | 3 cut(s) | 321, 447, 938 |
| GlaI | GCGC | 3 cut(s) | 258, 283, 363 |
| GluI | GCNGC | 5 cut(s) | 116, 228, 240, 365, 833 |
| GsuI | CTGGAG | 1 cut(s) | 1009 |
| HaeII | RGCGCY | 2 cut(s) | 285, 365 |
| HaeIII | GGCC | 3 cut(s) | 553, 889, 923 |
| HapII | CCGG | 2 cut(s) | 98, 1035 |
| HgaI | GACGC | 4 cut(s) | 103, 219, 291, 971 |
| HhaI | GCGC | 3 cut(s) | 259, 284, 364 |
| Hin1I | GRCGYC | 2 cut(s) | 95, 362 |
| Hin1II | CATG | 6 cut(s) | 441, 471, 505, 632, 676, 1009 |
| Hin6I | GCGC | 3 cut(s) | 257, 282, 362 |
| HinP1I | GCGC | 3 cut(s) | 257, 282, 362 |
| HinfI | GANTC | 3 cut(s) | 103, 297, 926 |
| HpaII | CCGG | 2 cut(s) | 98, 1035 |
| HphI | GGTGA | 4 cut(s) | 161, 538, 746, 1030 |
| Hpy188I | TCNGA | 8 cut(s) | 108, 200, 235, 312, 398, 541, 682, 1000 |
| Hpy188III | TCNNGA | 2 cut(s) | 485, 743 |
| Hpy99I | CGWCG | 7 cut(s) | 67, 250, 307, 316, 402, 497, 934 |
| HpyAV | CCTTC | 4 cut(s) | 143, 163, 346, 656 |
| HpyCH4IV | ACGT | 3 cut(s) | 273, 314, 854 |
| HpyCH4V | TGCA | 6 cut(s) | 22, 139, 612, 715, 917, 1009 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 236 |
| HpyF3I | CTNAG | 1 cut(s) | 785 |
| HpySE526I | ACGT | 3 cut(s) | 273, 314, 854 |
| Hsp92I | GRCGYC | 2 cut(s) | 95, 362 |
| Hsp92II | CATG | 6 cut(s) | 441, 471, 505, 632, 676, 1009 |
| HspAI | GCGC | 3 cut(s) | 257, 282, 362 |
| KasI | GGCGCC | 1 cut(s) | 361 |
| Kzo9I | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| LmnI | GCTCC | 1 cut(s) | 476 |
| Lsp1109I | GCAGC | 3 cut(s) | 226, 239, 819 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeI | CTAG | 3 cut(s) | 321, 447, 938 |
| MaeII | ACGT | 3 cut(s) | 273, 314, 854 |
| MaeIII | GTNAC | 2 cut(s) | 855, 983 |
| MalI | GATC | 8 cut(s) | 202, 483, 543, 587, 741, 747, 756, 942 |
| MboI | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| MboII | GAAGA | 4 cut(s) | 627, 749, 826, 829 |
| MflI | RGATCY | 2 cut(s) | 541, 745 |
| MhlI | GDGCHC | 2 cut(s) | 165, 492 |
| MluCI | AATT | 4 cut(s) | 392, 442, 803, 951 |
| Mly113I | GGCGCC | 1 cut(s) | 362 |
| MmeI | TCCRAC | 3 cut(s) | 335, 421, 920 |
| MseI | TTAA | 2 cut(s) | 954, 969 |
| MslI | CAYNNNNRTG | 1 cut(s) | 524 |
| MspA1I | CMGCKG | 2 cut(s) | 118, 696 |
| MspI | CCGG | 2 cut(s) | 98, 1035 |
| MspR9I | CCNGG | 1 cut(s) | 550 |
| MvaI | CCWGG | 1 cut(s) | 550 |
| MvnI | CGCG | 4 cut(s) | 159, 257, 264, 302 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 236 |
| NarI | GGCGCC | 1 cut(s) | 362 |
| NdeII | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| NlaIII | CATG | 6 cut(s) | 441, 471, 505, 632, 676, 1009 |
| NlaIV | GGNNCC | 2 cut(s) | 363, 478 |
| NmeAIII | GCCGAG | 1 cut(s) | 203 |
| NmuCI | GTSAC | 1 cut(s) | 983 |
| NspI | RCATGY | 3 cut(s) | 471, 676, 1009 |
| PceI | AGGCCT | 1 cut(s) | 553 |
| PciI | ACATGT | 1 cut(s) | 467 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 204, 261, 311, 339, 763 |
| PfeI | GAWTC | 3 cut(s) | 103, 297, 926 |
| PkrI | GCNGC | 5 cut(s) | 117, 229, 241, 366, 834 |
| PluTI | GGCGCC | 1 cut(s) | 365 |
| PscI | ACATGT | 1 cut(s) | 467 |
| PshBI | ATTAAT | 1 cut(s) | 969 |
| PsiI | TTATAA | 1 cut(s) | 882 |
| Psp124BI | GAGCTC | 1 cut(s) | 492 |
| Psp1406I | AACGTT | 1 cut(s) | 854 |
| Psp6I | CCWGG | 1 cut(s) | 548 |
| PspGI | CCWGG | 1 cut(s) | 548 |
| PspN4I | GGNNCC | 2 cut(s) | 363, 478 |
| PspPI | GGNCC | 2 cut(s) | 888, 1037 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 433, 465 |
| PstNI | CAGNNNCTG | 1 cut(s) | 239 |
| PsuI | RGATCY | 2 cut(s) | 541, 745 |
| RsaI | GTAC | 7 cut(s) | 14, 71, 221, 317, 416, 533, 874 |
| RsaNI | GTAC | 7 cut(s) | 13, 70, 220, 316, 415, 532, 873 |
| RseI | CAYNNNNRTG | 1 cut(s) | 524 |
| SacI | GAGCTC | 1 cut(s) | 492 |
| SaqAI | TTAA | 2 cut(s) | 954, 969 |
| SatI | GCNGC | 5 cut(s) | 116, 228, 240, 365, 833 |
| Sau3AI | GATC | 8 cut(s) | 200, 481, 541, 585, 739, 745, 754, 940 |
| Sau96I | GGNCC | 2 cut(s) | 888, 1037 |
| ScrFI | CCNGG | 1 cut(s) | 550 |
| SduI | GDGCHC | 2 cut(s) | 165, 492 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| SfoI | GGCGCC | 1 cut(s) | 363 |
| SinI | GGWCC | 1 cut(s) | 1037 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 524 |
| SmlI | CTYRAG | 1 cut(s) | 749 |
| SmoI | CTYRAG | 1 cut(s) | 749 |
| Sse9I | AATT | 4 cut(s) | 392, 442, 803, 951 |
| SseBI | AGGCCT | 1 cut(s) | 553 |
| SsiI | CCGC | 5 cut(s) | 116, 157, 365, 696, 702 |
| SspDI | GGCGCC | 1 cut(s) | 361 |
| SspMI | CTAG | 3 cut(s) | 321, 447, 938 |
| SstI | GAGCTC | 1 cut(s) | 492 |
| StuI | AGGCCT | 1 cut(s) | 553 |
| StyD4I | CCNGG | 1 cut(s) | 548 |
| StyI | CCWWGG | 1 cut(s) | 320 |
| TaiI | ACGT | 3 cut(s) | 276, 317, 857 |
| TaqI | TCGA | 9 cut(s) | 203, 245, 342, 452, 492, 588, 742, 801, 929 |
| TasI | AATT | 4 cut(s) | 392, 442, 803, 951 |
| TatI | WGTACW | 3 cut(s) | 219, 414, 531 |
| TauI | GCSGC | 2 cut(s) | 118, 367 |
| TfiI | GAWTC | 3 cut(s) | 103, 297, 926 |
| Tru1I | TTAA | 2 cut(s) | 954, 969 |
| Tru9I | TTAA | 2 cut(s) | 954, 969 |
| TscAI | CASTG | 2 cut(s) | 924, 992 |
| TseFI | GTSAC | 1 cut(s) | 983 |
| TseI | GCWGC | 3 cut(s) | 227, 239, 832 |
| Tsp45I | GTSAC | 1 cut(s) | 983 |
| TspDTI | ATGAA | 4 cut(s) | 490, 576, 606, 675 |
| TspGWI | ACGGA | 5 cut(s) | 30, 80, 136, 631, 914 |
| TspRI | CASTG | 2 cut(s) | 924, 992 |
| VpaK11BI | GGWCC | 1 cut(s) | 1037 |
| VspI | ATTAAT | 1 cut(s) | 969 |
| XapI | RAATTY | 2 cut(s) | 392, 803 |
| XceI | RCATGY | 3 cut(s) | 471, 676, 1009 |
| XmaJI | CCTAGG | 1 cut(s) | 320 |
| XspI | CTAG | 3 cut(s) | 321, 447, 938 |