Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0002636

Physical Location & Seq

Genomic Coordinates Forward (+)

6760799 .. 6769239

Gene Structure 8441 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1095800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGAGGAAATGTACGGATTGCAATCAACGGCCGACTATGGGGACAAAGGGTTTGAATCAACGACGGAGTACGATGACAGGGGGGCGTTGATGACTCCGGAGAATCTGATACTGCCGCTGGATTACCACAGCCTTCTGCACTCGTCCGTAGCCTTCCTCGAGCACAATCACCATCAACATCAACGGGAGGCGATGTTCGGATCGAACGACATCGTGTTGTACTCGGCAGCGTCAGAAGCTGCTTCGACGATAATCGCGCAACGCGAGGAGGACGTGTTCGGCGCCATCAAAACCAGAATCGCGTCTCATCCGACGTACCCTAGGCTCATTCACGCATACATCGAGTGCCAGAAGGTTGGGGCGCCGCCAGAAATAGCGAGTTTCTTGGACGAAATCCGACGAGAAAATGGCTTGTACAAAAAGCAGGGAGACTACTCATGTAATTCTAGTTCGATGTCGTCCTCCACATGTTTGGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGCGACATTTTGGTGAAGTACAAATCAGATCTATCCAGGCCTTTTGATGAAGCCTCCTCTTTTTTGAGCAAGATCGAAACGCAACTCACAAACCTCTGCACTTCATCATCTGCTCATGCCTCTTCCTCCGTTAGAACCCTCTGCGATGAAGGTGGTGGCATGTCATCGGATGAGGATTTCAGCGGAGGCGGAATAGATGTGCAGGAAGCTCAACAAGGAGGTGAAGATCGAGATCTCAAGGATCGGCTTATGCGTAGGTTTGGCAGTCATCTCAGCACCTTGAAGCTCGAATTCTCCAAGAAGAAGAAGAAAGGAAAGCTGCCTAAAGAAGCAAGGCAAACGTTACTTGATTGGTGGAGTACGCATTATAAATGGCCCTATCCAACGGAGGCTGATAAGATTGCACTGGCCGAATCAACGGGGCTAGATCAAAGGCAAATTAACAACTGGTTTATTAATCAGCGTAAGCGTCACTGGAGACCATCGGAGAACATGCAGTTTGAGGTGATGGATAATCTTACTGGACCATTCTTTACAAATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010033 GO:0010073 GO:0010093 GO:0010094 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048449 GO:0048462 GO:0048467 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

353

Amino Acids

39.87

Weight (kDa)

5.18

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KNOX1	PF03790	95 - 136	1.3e-19	KNOX1 domain
KNOX2	PF03791	157 - 204	3.1e-25	KNOX2 domain
ELK	PF03789	249 - 270	4.1e-07	ELK domain
Homeobox_KN	PF05920	289 - 328	1.6e-18	Homeobox KN domain
Homeodomain	PF00046	296 - 329	7.5e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23380 AT1G23380 AT1G70510 AT1G70510
fragaria_vesca	FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_5g05530 FvH4_5g05530
malus_domestica	MD06G1171700.v1.1 MD13G1095800.v1.1 MD14G1177200.v1.1 MD16G1097200.v1.1
prunus_persica	Prupe.1G249600_v2.0.a1 Prupe.5G171100_v2.0.a1
pyrus_communis	pycom06g15280 pycom13g08340 pycom14g14800 pycom16g08280
rosa_chinensis	RchiOBHm_Chr4g0433571 RchiOBHm_Chr7g0193251
rosa_laevigata	RLG00000004283 RLG00000006743
rosa_multiflora	Rmu_sc0017266.1_g000003
rosa_roxburghii	Rroxscaffold_3G00262250 Rroxscaffold_5G00375060
rosa_rugosa	Rorug04G0269800 Rorug07G0008500 Rorug07G0008600
rosa_samantha	Rh4AG324700 Rh4BG332400 Rh4CG347700 Rh4DG328800 Rh7AG134100 Rh7BG135100 Rh7CG138100 Rh7DG136100
rosa_wichuraiana	Rw4G028100 Rw7G011470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	882
AccB1I	GGYRCC	2 cut(s)	281, 361
AccII	CGCG	3 cut(s)	257, 264, 302
AccIII	TCCGGA	1 cut(s)	97
AciI	CCGC	4 cut(s)	116, 365, 696, 702
AclI	AACGTT	1 cut(s)	854
AclWI	GGATC	3 cut(s)	208, 476, 762
AcoI	YGGCCR	2 cut(s)	30, 921
AcsI	RAATTY	1 cut(s)	803
AcyI	GRCGYC	2 cut(s)	282, 362
AfaI	GTAC	7 cut(s)	14, 71, 221, 317, 416, 533, 874
AfiI	CCNNNNNNNGG	1 cut(s)	39
AflIII	ACRYGT	2 cut(s)	273, 467
AgsI	TTSAA	2 cut(s)	56, 796
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	1 cut(s)	548
AloI	GAACNNNNNNTCC	4 cut(s)	179, 211, 260, 292
AluBI	AGCT	5 cut(s)	239, 490, 722, 799, 832
AluI	AGCT	5 cut(s)	239, 490, 722, 799, 832
Alw21I	GWGCWC	2 cut(s)	165, 492
Alw26I	GTCTC	3 cut(s)	309, 423, 985
AlwI	GGATC	3 cut(s)	208, 476, 762
AlwNI	CAGNNNCTG	1 cut(s)	239
Ama87I	CYCGRG	2 cut(s)	158, 485
Aor13HI	TCCGGA	1 cut(s)	97
AoxI	GGCC	4 cut(s)	30, 551, 887, 921
ApeKI	GCWGC	3 cut(s)	227, 239, 832
ApoI	RAATTY	1 cut(s)	803
ArsI	GACNNNNNNTTYG	2 cut(s)	35, 67
AseI	ATTAAT	1 cut(s)	969
AspA2I	CCTAGG	1 cut(s)	320
AspLEI	GCGC	3 cut(s)	259, 284, 364
AspS9I	GGNCC	2 cut(s)	888, 1037
AsuHPI	GGTGA	4 cut(s)	161, 538, 746, 1030
AvaI	CYCGRG	2 cut(s)	158, 485
AvaII	GGWCC	1 cut(s)	1037
AvrII	CCTAGG	1 cut(s)	320
BanI	GGYRCC	2 cut(s)	281, 361
BanII	GRGCYC	1 cut(s)	492
Bbv12I	GWGCWC	2 cut(s)	165, 492
BbvI	GCAGC	3 cut(s)	226, 239, 819
BccI	CCATC	4 cut(s)	180, 293, 1003, 1015
BceAI	ACGGC	1 cut(s)	45
BciT130I	CCWGG	1 cut(s)	550
BcoDI	GTCTC	3 cut(s)	309, 423, 985
BfaI	CTAG	3 cut(s)	321, 447, 938
BfoI	RGCGCY	2 cut(s)	285, 365
BglII	AGATCT	2 cut(s)	541, 745
BisI	GCNGC	5 cut(s)	116, 228, 240, 365, 833
BlnI	CCTAGG	1 cut(s)	320
BlsI	GCNGC	5 cut(s)	117, 229, 241, 366, 834
Bme1390I	CCNGG	1 cut(s)	550
Bme18I	GGWCC	1 cut(s)	1037
BmeT110I	CYCGRG	2 cut(s)	158, 485
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	2 cut(s)	888, 1037
BmiI	GGNNCC	3 cut(s)	283, 363, 478
BmrFI	CCNGG	1 cut(s)	550
BpmI	CTGGAG	1 cut(s)	1009
BpuEI	CTTGAG	1 cut(s)	734
BsaBI	GATNNNNATC	2 cut(s)	22, 744
BsaHI	GRCGYC	2 cut(s)	282, 362
BsaI	GGTCTC	1 cut(s)	985
BsaJI	CCNNGG	1 cut(s)	320
BsaWI	WCCGGW	1 cut(s)	97
BsaXI	ACNNNNNCTCC	5 cut(s)	26, 179, 209, 260, 290
Bsc4I	CCNNNNNNNGG	1 cut(s)	39
Bse1I	ACTGG	4 cut(s)	924, 965, 992, 1039
Bse8I	GATNNNNATC	2 cut(s)	22, 744
BseAI	TCCGGA	1 cut(s)	97
BseBI	CCWGG	1 cut(s)	550
BseDI	CCNNGG	1 cut(s)	320
BseGI	GGATG	2 cut(s)	307, 688
BseJI	GATNNNNATC	2 cut(s)	22, 744
BseLI	CCNNNNNNNGG	1 cut(s)	39
BseMII	CTCAG	1 cut(s)	799
BseNI	ACTGG	4 cut(s)	924, 965, 992, 1039
BseRI	GAGGAG	2 cut(s)	281, 559
BseX3I	CGGCCG	1 cut(s)	30
BseXI	GCAGC	3 cut(s)	226, 239, 819
BsgI	GTGCAG	3 cut(s)	122, 595, 734
Bsh1236I	CGCG	3 cut(s)	257, 264, 302
Bsh1285I	CGRYCG	1 cut(s)	33
BshFI	GGCC	4 cut(s)	32, 553, 889, 923
BshNI	GGYRCC	2 cut(s)	281, 361
BsiEI	CGRYCG	1 cut(s)	33
BsiHKAI	GWGCWC	2 cut(s)	165, 492
BsiHKCI	CYCGRG	2 cut(s)	158, 485
BsiSI	CCGG	1 cut(s)	98
BslFI	GGGAC	1 cut(s)	56
BslI	CCNNNNNNNGG	1 cut(s)	39
BsmAI	GTCTC	3 cut(s)	309, 423, 985
BsmBI	CGTCTC	1 cut(s)	309
BsmFI	GGGAC	1 cut(s)	56
BsnI	GGCC	4 cut(s)	32, 553, 889, 923
Bso31I	GGTCTC	1 cut(s)	985
BsoBI	CYCGRG	2 cut(s)	158, 485
Bsp1286I	GDGCHC	2 cut(s)	165, 492
Bsp13I	TCCGGA	1 cut(s)	97
Bsp1407I	TGTACA	1 cut(s)	414
Bsp143I	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
BspACI	CCGC	4 cut(s)	116, 365, 696, 702
BspANI	GGCC	4 cut(s)	32, 553, 889, 923
BspCNI	CTCAG	1 cut(s)	798
BspEI	TCCGGA	1 cut(s)	97
BspFNI	CGCG	3 cut(s)	257, 264, 302
BspLI	GGNNCC	3 cut(s)	283, 363, 478
BspPI	GGATC	3 cut(s)	208, 476, 762
BspT107I	GGYRCC	2 cut(s)	281, 361
BspTNI	GGTCTC	1 cut(s)	985
BsrGI	TGTACA	1 cut(s)	414
BsrI	ACTGG	4 cut(s)	924, 965, 992, 1039
BssECI	CCNNGG	1 cut(s)	320
BssMI	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
BssNI	GRCGYC	2 cut(s)	282, 362
BssT1I	CCWWGG	1 cut(s)	320
Bst2UI	CCWGG	1 cut(s)	550
Bst6I	CTCTTC	1 cut(s)	640
BstACI	GRCGYC	2 cut(s)	282, 362
BstAUI	TGTACA	1 cut(s)	414
BstDEI	CTNAG	1 cut(s)	785
BstF5I	GGATG	2 cut(s)	307, 688
BstFNI	CGCG	3 cut(s)	257, 264, 302
BstH2I	RGCGCY	2 cut(s)	285, 365
BstHHI	GCGC	3 cut(s)	259, 284, 364
BstKTI	GATC	8 cut(s)	203, 484, 544, 588, 742, 748, 757, 943
BstMAI	GTCTC	3 cut(s)	309, 423, 985
BstMBI	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
BstMCI	CGRYCG	1 cut(s)	33
BstMWI	GCNNNNNNNGC	1 cut(s)	236
BstNI	CCWGG	1 cut(s)	550
BstNSI	RCATGY	3 cut(s)	471, 676, 1009
BstSCI	CCNGG	1 cut(s)	548
BstUI	CGCG	3 cut(s)	257, 264, 302
BstV1I	GCAGC	3 cut(s)	226, 239, 819
BstX2I	RGATCY	2 cut(s)	541, 745
BstXI	CCANNNNNNTGG	2 cut(s)	356, 472
BstYI	RGATCY	2 cut(s)	541, 745
BstZI	CGGCCG	1 cut(s)	30
BsuRI	GGCC	4 cut(s)	32, 553, 889, 923
BtgZI	GCGATG	2 cut(s)	206, 672
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	2 cut(s)	307, 688
BtsIMutI	CAGTG	2 cut(s)	917, 985
CaiI	CAGNNNCTG	1 cut(s)	239
CfoI	GCGC	3 cut(s)	259, 284, 364
Cfr13I	GGNCC	2 cut(s)	888, 1037
CseI	GACGC	3 cut(s)	219, 291, 971
Csp6I	GTAC	7 cut(s)	13, 70, 220, 316, 415, 532, 873
CviAII	CATG	6 cut(s)	438, 468, 502, 629, 673, 1006
CviQI	GTAC	7 cut(s)	13, 70, 220, 316, 415, 532, 873
DdeI	CTNAG	1 cut(s)	785
DinI	GGCGCC	2 cut(s)	283, 363
DpnI	GATC	8 cut(s)	202, 483, 543, 587, 741, 747, 756, 942
DpnII	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
EaeI	YGGCCR	2 cut(s)	30, 921
EagI	CGGCCG	1 cut(s)	30
Eam1104I	CTCTTC	1 cut(s)	640
EarI	CTCTTC	1 cut(s)	640
EciI	GGCGGA	1 cut(s)	717
Ecl136II	GAGCTC	1 cut(s)	490
EclXI	CGGCCG	1 cut(s)	30
Eco130I	CCWWGG	1 cut(s)	320
Eco147I	AGGCCT	1 cut(s)	553
Eco24I	GRGCYC	1 cut(s)	492
Eco31I	GGTCTC	1 cut(s)	985
Eco47I	GGWCC	1 cut(s)	1037
Eco52I	CGGCCG	1 cut(s)	30
Eco53kI	GAGCTC	1 cut(s)	490
Eco88I	CYCGRG	2 cut(s)	158, 485
EcoICRI	GAGCTC	1 cut(s)	490
EcoRI	GAATTC	1 cut(s)	803
EcoRII	CCWGG	1 cut(s)	548
EcoT14I	CCWWGG	1 cut(s)	320
EcoT38I	GRGCYC	1 cut(s)	492
EgeI	GGCGCC	2 cut(s)	283, 363
EheI	GGCGCC	2 cut(s)	283, 363
ErhI	CCWWGG	1 cut(s)	320
Esp3I	CGTCTC	1 cut(s)	309
FaeI	CATG	6 cut(s)	441, 471, 505, 632, 676, 1009
FaqI	GGGAC	1 cut(s)	56
FatI	CATG	6 cut(s)	437, 467, 501, 628, 672, 1005
Fnu4HI	GCNGC	5 cut(s)	116, 228, 240, 365, 833
FokI	GGATG	2 cut(s)	294, 695
FriOI	GRGCYC	1 cut(s)	492
Fsp4HI	GCNGC	5 cut(s)	116, 228, 240, 365, 833
FspBI	CTAG	3 cut(s)	321, 447, 938
GlaI	GCGC	3 cut(s)	258, 283, 363
GluI	GCNGC	5 cut(s)	116, 228, 240, 365, 833
GsuI	CTGGAG	1 cut(s)	1009
HaeII	RGCGCY	2 cut(s)	285, 365
HaeIII	GGCC	4 cut(s)	32, 553, 889, 923
HapII	CCGG	1 cut(s)	98
HgaI	GACGC	3 cut(s)	219, 291, 971
HhaI	GCGC	3 cut(s)	259, 284, 364
Hin1I	GRCGYC	2 cut(s)	282, 362
Hin1II	CATG	6 cut(s)	441, 471, 505, 632, 676, 1009
Hin6I	GCGC	3 cut(s)	257, 282, 362
HinP1I	GCGC	3 cut(s)	257, 282, 362
HinfI	GANTC	5 cut(s)	56, 94, 103, 297, 926
HpaII	CCGG	1 cut(s)	98
HphI	GGTGA	4 cut(s)	161, 538, 746, 1030
Hpy188I	TCNGA	8 cut(s)	108, 200, 235, 312, 398, 541, 682, 1000
Hpy188III	TCNNGA	3 cut(s)	98, 485, 743
Hpy99I	CGWCG	5 cut(s)	67, 250, 316, 402, 497
HpyAV	CCTTC	4 cut(s)	143, 163, 346, 656
HpyCH4IV	ACGT	3 cut(s)	273, 314, 854
HpyCH4V	TGCA	6 cut(s)	22, 139, 612, 715, 917, 1009
HpyF10VI	GCNNNNNNNGC	1 cut(s)	236
HpyF3I	CTNAG	1 cut(s)	785
HpySE526I	ACGT	3 cut(s)	273, 314, 854
Hsp92I	GRCGYC	2 cut(s)	282, 362
Hsp92II	CATG	6 cut(s)	441, 471, 505, 632, 676, 1009
HspAI	GCGC	3 cut(s)	257, 282, 362
KasI	GGCGCC	2 cut(s)	281, 361
Kpn2I	TCCGGA	1 cut(s)	97
Kzo9I	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
LmnI	GCTCC	1 cut(s)	476
Lsp1109I	GCAGC	3 cut(s)	226, 239, 819
MaeI	CTAG	3 cut(s)	321, 447, 938
MaeII	ACGT	3 cut(s)	273, 314, 854
MaeIII	GTNAC	2 cut(s)	855, 983
MalI	GATC	8 cut(s)	202, 483, 543, 587, 741, 747, 756, 942
MboI	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
MboII	GAAGA	5 cut(s)	627, 749, 826, 829, 832
MflI	RGATCY	2 cut(s)	541, 745
MhlI	GDGCHC	2 cut(s)	165, 492
MluCI	AATT	3 cut(s)	442, 803, 951
Mly113I	GGCGCC	2 cut(s)	282, 362
MlyI	GAGTC	1 cut(s)	88
MmeI	TCCRAC	3 cut(s)	335, 421, 920
MroI	TCCGGA	1 cut(s)	97
MseI	TTAA	2 cut(s)	954, 969
MslI	CAYNNNNRTG	1 cut(s)	524
MspA1I	CMGCKG	2 cut(s)	118, 696
MspI	CCGG	1 cut(s)	98
MspR9I	CCNGG	1 cut(s)	550
MvaI	CCWGG	1 cut(s)	550
MvnI	CGCG	3 cut(s)	257, 264, 302
MwoI	GCNNNNNNNGC	1 cut(s)	236
NarI	GGCGCC	2 cut(s)	282, 362
NdeII	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
NlaIII	CATG	6 cut(s)	441, 471, 505, 632, 676, 1009
NlaIV	GGNNCC	3 cut(s)	283, 363, 478
NmeAIII	GCCGAG	1 cut(s)	203
NmuCI	GTSAC	1 cut(s)	983
NspI	RCATGY	3 cut(s)	471, 676, 1009
PaeR7I	CTCGAG	1 cut(s)	158
PceI	AGGCCT	1 cut(s)	553
PciI	ACATGT	1 cut(s)	467
PcsI	WCGNNNNNNNCGW	4 cut(s)	204, 261, 339, 763
PfeI	GAWTC	4 cut(s)	56, 103, 297, 926
PkrI	GCNGC	5 cut(s)	117, 229, 241, 366, 834
PleI	GAGTC	1 cut(s)	88
PluTI	GGCGCC	2 cut(s)	285, 365
PpsI	GAGTC	1 cut(s)	88
PscI	ACATGT	1 cut(s)	467
PshBI	ATTAAT	1 cut(s)	969
PsiI	TTATAA	1 cut(s)	882
Psp124BI	GAGCTC	1 cut(s)	492
Psp1406I	AACGTT	1 cut(s)	854
Psp6I	CCWGG	1 cut(s)	548
PspGI	CCWGG	1 cut(s)	548
PspN4I	GGNNCC	3 cut(s)	283, 363, 478
PspPI	GGNCC	2 cut(s)	888, 1037
PspXI	VCTCGAGB	1 cut(s)	158
PsrI	GAACNNNNNNTAC	2 cut(s)	433, 465
PstNI	CAGNNNCTG	1 cut(s)	239
PsuI	RGATCY	2 cut(s)	541, 745
RsaI	GTAC	7 cut(s)	14, 71, 221, 317, 416, 533, 874
RsaNI	GTAC	7 cut(s)	13, 70, 220, 316, 415, 532, 873
RseI	CAYNNNNRTG	1 cut(s)	524
SacI	GAGCTC	1 cut(s)	492
SaqAI	TTAA	2 cut(s)	954, 969
SatI	GCNGC	5 cut(s)	116, 228, 240, 365, 833
Sau3AI	GATC	8 cut(s)	200, 481, 541, 585, 739, 745, 754, 940
Sau96I	GGNCC	2 cut(s)	888, 1037
SchI	GAGTC	1 cut(s)	88
ScrFI	CCNGG	1 cut(s)	550
SduI	GDGCHC	2 cut(s)	165, 492
SfoI	GGCGCC	2 cut(s)	283, 363
Sfr274I	CTCGAG	1 cut(s)	158
SinI	GGWCC	1 cut(s)	1037
SlaI	CTCGAG	1 cut(s)	158
SmiMI	CAYNNNNRTG	1 cut(s)	524
SmlI	CTYRAG	2 cut(s)	158, 749
SmoI	CTYRAG	2 cut(s)	158, 749
Sse9I	AATT	3 cut(s)	442, 803, 951
SseBI	AGGCCT	1 cut(s)	553
SsiI	CCGC	4 cut(s)	116, 365, 696, 702
SspDI	GGCGCC	2 cut(s)	281, 361
SspMI	CTAG	3 cut(s)	321, 447, 938
SstI	GAGCTC	1 cut(s)	492
StuI	AGGCCT	1 cut(s)	553
StyD4I	CCNGG	1 cut(s)	548
StyI	CCWWGG	1 cut(s)	320
TaiI	ACGT	3 cut(s)	276, 317, 857
TaqI	TCGA	9 cut(s)	159, 203, 245, 342, 452, 492, 588, 742, 801
TasI	AATT	3 cut(s)	442, 803, 951
TatI	WGTACW	3 cut(s)	219, 414, 531
TauI	GCSGC	2 cut(s)	118, 367
TfiI	GAWTC	4 cut(s)	56, 103, 297, 926
Tru1I	TTAA	2 cut(s)	954, 969
Tru9I	TTAA	2 cut(s)	954, 969
TscAI	CASTG	2 cut(s)	924, 992
TseFI	GTSAC	1 cut(s)	983
TseI	GCWGC	3 cut(s)	227, 239, 832
Tsp45I	GTSAC	1 cut(s)	983
TspDTI	ATGAA	4 cut(s)	490, 576, 606, 675
TspGWI	ACGGA	5 cut(s)	30, 80, 136, 631, 914
TspRI	CASTG	2 cut(s)	924, 992
VpaK11BI	GGWCC	1 cut(s)	1037
VspI	ATTAAT	1 cut(s)	969
XapI	RAATTY	1 cut(s)	803
XceI	RCATGY	3 cut(s)	471, 676, 1009
XhoI	CTCGAG	1 cut(s)	158
XmaJI	CCTAGG	1 cut(s)	320
XspI	CTAG	3 cut(s)	321, 447, 938

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.