Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003113

Physical Location & Seq

Genomic Coordinates Forward (+)

31477410 .. 31481320

Gene Structure 3911 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g33171.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2748 bp

ATGGCTTTCTGGGGTTTTCTCTTCCTTGTGCTCTCACTTTCAACCCTGCATTCCCAGTCCCAGAAGCTCTGCGAGGACCAGCCAGCCATGGAAGCCATTCTCAAGTCCATCACACCAAAACTACCCGATAAATGGTCGTCTGGCTCCGATTGTTGTACCTGGGGCGCAGTAGGTTGCGAGAATGGGAAGGTGACAGCTATCATGATCAAAGAGCAAAACCTCTCCGGCTCTCTCCATCCCGACATCAACAAGCTCACTTCTCTGCAGCGGCTCCACATTATGCGCAACAATCTCACAGGCTCCTTCCCAAGCCTACAAGGCTTGTCTCAGCTTACGGAGGTTTACGCCAACGACAACAGCTTCACATATTTTCCGGATAATGATTTCTTCTCCGGCCTCGATTCCCTTGAAGTATTCCGCGTCGAGAACAACCCTTTTCAGGCGTGGAAGATTCCGGATAGCACCAAGTTTGCCTCCAAACTGACCACTTTCACTGCGAGTAGTGCAAACATTTCTGGGAAGATCCCGGATTTCTTTGACAACATGCCTAGTTTGGTTACCTTGCAGTTAGCCTATAACAATCTCGAAGGTGAACTGCCTGCCAGTTTTTCAGGTTCCGGGATCGGGACATTATGGTTGAACAACAACGATAGGCTCAATGGGACTATCTCTGTGTTACAGAACATGACAGGGTTGACTCAAGTTTGGCTACATGGGAATGAATTCACAGGTCCTTTACCAGATTTTTCACAGCTTACCAACTTACAGGATTTGAAATTGGGGTCCAACAAGCTTACGGGGATTGTTCCTGCCTCTTTGCAAAACCTCACTTCGCTTCAGAATGTCAGTTTGTCTAGCAATATGCTTCAAGGACCTATGCCCAATTTCACTGGCGGTGCTATTAATCAAGTGGATGTGACATCTAATAACTTTTGCAGAAATGATACTACTACATGCGATCCCCGTGTGACTGCATTGCTCTCCATTGCCAAAGACATGGGTTACCCTAGTGTTTTTGCTGATAATTGGATAGGGAATGATCCTTGTGGGAGTAGTCATTGGACTGGAGTTACATGTTCAGGAAAAGGTGACATTACTGTTCTTAATTTTGCCAACATGCGTCTGACGGGTACGATTTCTTCCAGTTTTTCATTGCTTACATCCTTGAATAGGTTGATAGTTAAAGATAATAATCTAACCGGTACTATACCCCAAGAGCTCACAAGTTTACACAACCTTGAAGAACTAGATCTATCAAACAATAAGCTTTATGGTAAAGTACCTAGTTTTCGAGAAAATGTAGTGGTAAAATTAGGGGGAAACCCAGATATAGGCAAGGACAGTCCTAGTGGCACTGCTGATGGTGGAGGTAGCAAGAAATCCAAGACTGGTATGAATGTTGTAGGGGTTGTTATGGGAGGTGTAGCTGGAGTGCTTCTACTGGTGTTACTTAGTGTATTTCTGCTCAAGAAAAAACAGAGGGGTTCTGGTAAAGTGCAAAGTCCAAATGCATTGGTTATACATCCTCATCACTCTGGTGATCAAAATGCTGTCAAAATTACTGTTGCTAACAGGGTTAATGGCATTGGGAGCGAAAATCGCAGTCCTCATGACATTCATGTTGAGTCAGGGAATATGATAATTTCCATCCAAGTTTTGAGGAGTGTGACCAATAACTTTAATGAAGATAAGATATTGGGAAAAGGTGGTTTTGGAACTGTGTACGAAGGAGAATTGCATGATGGAACAAAAATTGCCGTGAAGAGAATGGAATCCGGAATGGTAGCTGATAAAGGCCTGCATGAGTTCAAGTCTGAGATTGCAGTTCTTACTAAAGTCCGACATCGCCACTTGGTGGGACTTCTTGGATATTGTTTGGATGGGAATGAGAAGCTTCTTGTCTATGAGCACATGCCGCAGGGGACTCTTAGTAGACATTTGTTCAACTGGAAAGAAGAAGGGTTGAAGCCACTTGAATGGACTAGAAGACTGACCATTGCCTTGGATGTTGCCAGAGGGGTTCAATATCTACATGGTTTAGCCAACGAAATCTTCATTCATAGAGACCTTAAACCTTCAAATATTTTACTTGGAGATGATATGCGGGCGAAAGTGGCAGACTTTGGATTGGTTCGTCTTGCTCCAGCAGGGAAAGCCTCTATTGAGACGAGACTAGCAGGAACTTTTGGTTATTTGGCTCCAGAATATGCAGCAACTGGACGGATGACTCTGAAGGTAGATGTGTACAGCTTTGGAGTAATATTAATGGAGTTGATCACGGGTAGAAAGGCAATTGATGAAAGCCAGCCTGGGGAGAGTTGTCACCTAGTGACATGGTTTCGTAGAAAGCTCATTAAGACAGAAGCATTCCCAGAGATAGTTGATCCAAGAATTAGTGTCAATGAGGAAACAATTTCTAGTATTTGCACAGTTGCTGAGCTTGCTGGTCATTGCAGCGCAAGGGAGCCGTACCAAAGGCCTGACATAGGTCATGCAGTCAATGTGCTTTCATCGCTTGTTGAGCAGTGGAAGCCATCTAAGCAAGAAGATTTTGATGAGATGGATGCAATCAACTTTGATGTGCCGTTAAATGAAGCGGTAAAGATGTGGAAGGCTGCTGAGGGAAAAAGCAACATCGATGATTCTTCATCCTCATCTATATTTCCTAGTGGGGACTCTACCCAGACCAGCATTCCTAATCGGCCTTCTGGATTTGCAGAGTCGTTTACATCATCAGATGGGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

916

Amino Acids

99.66

Weight (kDa)

6.09

Isoelectric Point (pI)

31.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	249 - 289	1.2e-06	Leucine rich repeat
Pkinase	PF00069	560 - 833	2e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	563 - 777	1.5e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01820
fragaria_vesca	FvH4_4g33170 FvH4_4g33170 FvH4_4g33171
malus_domestica	MD13G1017200.v1.1 MD16G1015000.v1.1 MD16G1015200.v1.1
prunus_persica	Prupe.1G336300_v2.0.a1 Prupe.1G336300_v2.0.a1
pyrus_communis	pycom13g01480 pycom16g01400
rosa_chinensis	RchiOBHm_Chr4g0442211 RchiOBHm_Chr4g0442221 RchiOBHm_Chr4g0442231
rosa_laevigata	RLG00000006022 RLG00000006023
rosa_multiflora	Rmu_co8222306.1_g000001 Rmu_sc0000124.1_g000060 Rmu_sc0000124.1_g000062 Rmu_sc0010284.1_g000002 Rmu_sc0010284.1_g000003
rosa_roxburghii	Rroxscaffold_5G00383140 Rroxscaffold_5G00383150
rosa_rugosa	Rorug04G0339700 Rorug04G0339800 Rorug04G0339900
rosa_samantha	Rh4AG391300 Rh4AG391400 Rh4BG405000 Rh4BG405100 Rh4CG420100 Rh4CG420200 Rh4DG398100 Rh4DG398200 Rh4DG398300
rosa_wichuraiana	Rw4G033820 Rw4G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	284
AccB7I	CCANNNNNTGG	1 cut(s)	1855
AccI	GTMKAC	1 cut(s)	1933
AccII	CGCG	1 cut(s)	420
AccIII	TCCGGA	3 cut(s)	373, 454, 1775
AciI	CCGC	7 cut(s)	268, 418, 894, 1916, 2104, 2597, 2743
AclWI	GGATC	5 cut(s)	517, 629, 953, 1034, 2378
AcsI	RAATTY	1 cut(s)	722
AcuI	CTGAAG	2 cut(s)	821, 2252
AdeI	CACNNNGTG	2 cut(s)	1855, 2329
AfaI	GTAC	7 cut(s)	157, 1132, 1204, 1281, 1724, 2246, 2471
AfiI	CCNNNNNNNGG	8 cut(s)	132, 439, 624, 1170, 1331, 1855, 2311, 2486
AflIII	ACRYGT	1 cut(s)	1073
AgeI	ACCGGT	1 cut(s)	1199
AjnI	CCWGG	2 cut(s)	158, 2308
AjuI	GAANNNNNNNTTGG	2 cut(s)	2036, 2068
AleI	CACNNNNGTG	1 cut(s)	1536
Alw21I	GWGCWC	3 cut(s)	33, 1221, 1911
Alw26I	GTCTC	4 cut(s)	330, 2058, 2159, 2164
AlwI	GGATC	5 cut(s)	517, 629, 953, 1034, 2378
AlwNI	CAGNNNCTG	2 cut(s)	2216, 2435
Aor13HI	TCCGGA	3 cut(s)	373, 454, 1775
AoxI	GGCC	4 cut(s)	394, 1795, 2477, 2702
ApeKI	GCWGC	4 cut(s)	265, 2210, 2454, 2615
ApoI	RAATTY	1 cut(s)	722
AseI	ATTAAT	2 cut(s)	903, 2264
AsiGI	ACCGGT	1 cut(s)	1199
Asp700I	GAANNNNTTC	2 cut(s)	96, 722
AspLEI	GCGC	3 cut(s)	167, 285, 2459
AspS9I	GGNCC	4 cut(s)	76, 731, 783, 872
AsuC2I	CCSGG	2 cut(s)	527, 619
AsuHPI	GGTGA	5 cut(s)	202, 602, 1100, 1550, 2315
AvaII	GGWCC	4 cut(s)	76, 731, 783, 872
BanII	GRGCYC	1 cut(s)	1221
BarI	GAAGNNNNNNTAC	2 cut(s)	1123, 1155
BbsI	GAAGAC	1 cut(s)	1993
Bbv12I	GWGCWC	3 cut(s)	33, 1221, 1911
BbvCI	CCTCAGC	1 cut(s)	2619
BbvI	GCAGC	4 cut(s)	277, 2222, 2466, 2602
BccI	CCATC	9 cut(s)	116, 243, 1355, 1655, 1736, 1874, 2542, 2554, 2732
BceAI	ACGGC	3 cut(s)	1742, 2452, 2569
BciT130I	CCWGG	2 cut(s)	160, 2310
BclI	TGATCA	3 cut(s)	204, 1540, 2274
BcnI	CCSGG	2 cut(s)	527, 619
BcoDI	GTCTC	4 cut(s)	330, 2058, 2159, 2164
BfmI	CTRYAG	1 cut(s)	263
BglI	GCCNNNNNGGC	1 cut(s)	318
BglII	AGATCT	1 cut(s)	1249
BisI	GCNGC	6 cut(s)	266, 269, 1916, 2211, 2455, 2616
BlpI	GCTNAGC	1 cut(s)	2436
BlsI	GCNGC	6 cut(s)	267, 270, 1917, 2212, 2456, 2617
Bme1390I	CCNGG	4 cut(s)	160, 527, 619, 2310
Bme18I	GGWCC	4 cut(s)	76, 731, 783, 872
BmgT120I	GGNCC	4 cut(s)	76, 731, 783, 872
BmiI	GGNNCC	7 cut(s)	145, 272, 301, 616, 784, 2199, 2466
BmrFI	CCNGG	4 cut(s)	160, 527, 619, 2310
BmrI	ACTGGG	1 cut(s)	49
BmsI	GCATC	1 cut(s)	2554
BmuI	ACTGGG	1 cut(s)	49
BoxI	GACNNNNGTC	1 cut(s)	2487
BpiI	GAAGAC	1 cut(s)	1993
BpmI	CTGGAG	4 cut(s)	1086, 1449, 2127, 2184
Bpu10I	CCTNAGC	1 cut(s)	2619
Bpu1102I	GCTNAGC	1 cut(s)	2436
BpuEI	CTTGAG	3 cut(s)	86, 684, 1451
BpuMI	CCSGG	2 cut(s)	527, 619
Bsa29I	ATCGAT	1 cut(s)	2637
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaI	GGTCTC	1 cut(s)	2058
BsaJI	CCNNGG	4 cut(s)	87, 159, 2001, 2309
BsaWI	WCCGGW	4 cut(s)	373, 454, 1199, 1775
Bsc4I	CCNNNNNNNGG	8 cut(s)	132, 439, 624, 1170, 1331, 1855, 2311, 2486
Bse118I	RCCGGY	1 cut(s)	1199
Bse1I	ACTGG	9 cut(s)	55, 603, 895, 1069, 1143, 1393, 1446, 1952, 2221
Bse3DI	GCAATG	5 cut(s)	974, 984, 1151, 1995, 2449
Bse8I	GATNNNNATC	1 cut(s)	1191
BseAI	TCCGGA	3 cut(s)	373, 454, 1775
BseBI	CCWGG	2 cut(s)	160, 2310
BseCI	ATCGAT	1 cut(s)	2637
BseDI	CCNNGG	4 cut(s)	87, 159, 2001, 2309
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	8 cut(s)	132, 439, 624, 1170, 1331, 1855, 2311, 2486
BseMI	GCAATG	5 cut(s)	974, 984, 1151, 1995, 2449
BseMII	CTCAG	4 cut(s)	341, 1806, 2427, 2610
BseNI	ACTGG	9 cut(s)	55, 603, 895, 1069, 1143, 1393, 1446, 1952, 2221
BseRI	GAGGAG	1 cut(s)	1675
BseXI	GCAGC	4 cut(s)	277, 2222, 2466, 2602
Bsh1236I	CGCG	1 cut(s)	420
BshFI	GGCC	4 cut(s)	396, 1797, 2479, 2704
BshTI	ACCGGT	1 cut(s)	1199
BshVI	ATCGAT	1 cut(s)	2637
BsiHKAI	GWGCWC	3 cut(s)	33, 1221, 1911
BsiSI	CCGG	8 cut(s)	225, 374, 393, 455, 527, 618, 1200, 1776
BslFI	GGGAC	6 cut(s)	43, 640, 676, 1872, 1936, 2687
BslI	CCNNNNNNNGG	8 cut(s)	132, 439, 624, 1170, 1331, 1855, 2311, 2486
BsmAI	GTCTC	4 cut(s)	330, 2058, 2159, 2164
BsmBI	CGTCTC	1 cut(s)	2159
BsmFI	GGGAC	6 cut(s)	43, 640, 676, 1872, 1936, 2687
BsmI	GAATGC	3 cut(s)	49, 2366, 2691
BsnI	GGCC	4 cut(s)	396, 1797, 2479, 2704
Bso31I	GGTCTC	1 cut(s)	2058
Bsp1286I	GDGCHC	3 cut(s)	33, 1221, 1911
Bsp13I	TCCGGA	3 cut(s)	373, 454, 1775
Bsp1407I	TGTACA	1 cut(s)	2244
Bsp143I	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
Bsp1720I	GCTNAGC	1 cut(s)	2436
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	7 cut(s)	268, 418, 894, 1916, 2104, 2597, 2743
BspANI	GGCC	4 cut(s)	396, 1797, 2479, 2704
BspCNI	CTCAG	4 cut(s)	340, 1807, 2428, 2611
BspDI	ATCGAT	1 cut(s)	2637
BspEI	TCCGGA	3 cut(s)	373, 454, 1775
BspFNI	CGCG	1 cut(s)	420
BspHI	TCATGA	2 cut(s)	201, 1609
BspLI	GGNNCC	7 cut(s)	145, 272, 301, 616, 784, 2199, 2466
BspMAI	CTGCAG	1 cut(s)	267
BspPI	GGATC	5 cut(s)	517, 629, 953, 1034, 2378
BspTNI	GGTCTC	1 cut(s)	2058
BsrDI	GCAATG	5 cut(s)	974, 984, 1151, 1995, 2449
BsrFI	RCCGGY	1 cut(s)	1199
BsrGI	TGTACA	1 cut(s)	2244
BsrI	ACTGG	9 cut(s)	55, 603, 895, 1069, 1143, 1393, 1446, 1952, 2221
BssAI	RCCGGY	1 cut(s)	1199
BssECI	CCNNGG	4 cut(s)	87, 159, 2001, 2309
BssMI	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
BssT1I	CCWWGG	2 cut(s)	87, 2001
Bst2UI	CCWGG	2 cut(s)	160, 2310
Bst4CI	ACNGT	5 cut(s)	1099, 1343, 1564, 1720, 2431
Bst6I	CTCTTC	2 cut(s)	26, 1757
BstAUI	TGTACA	1 cut(s)	2244
BstC8I	GCNNGC	6 cut(s)	84, 600, 1799, 2106, 2306, 2442
BstDEI	CTNAG	7 cut(s)	327, 1451, 1815, 1928, 2436, 2538, 2619
BstDSI	CCRYGG	1 cut(s)	87
BstEII	GGTNACC	2 cut(s)	556, 1001
BstENI	CCTNNNNNAGG	2 cut(s)	1168, 2484
BstFNI	CGCG	1 cut(s)	420
BstHHI	GCGC	3 cut(s)	167, 285, 2459
BstKTI	GATC	9 cut(s)	207, 525, 624, 961, 1042, 1252, 1543, 2277, 2386
BstMAI	GTCTC	4 cut(s)	330, 2058, 2159, 2164
BstMBI	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
BstNI	CCWGG	2 cut(s)	160, 2310
BstNSI	RCATGY	5 cut(s)	547, 957, 1077, 1120, 1915
BstPAI	GACNNNNGTC	1 cut(s)	2487
BstPI	GGTNACC	2 cut(s)	556, 1001
BstSCI	CCNGG	4 cut(s)	158, 525, 617, 2308
BstSFI	CTRYAG	1 cut(s)	263
BstUI	CGCG	1 cut(s)	420
BstV1I	GCAGC	4 cut(s)	277, 2222, 2466, 2602
BstV2I	GAAGAC	1 cut(s)	1993
BstX2I	RGATCY	2 cut(s)	522, 1249
BstXI	CCANNNNNNTGG	3 cut(s)	997, 1977, 2002
BstYI	RGATCY	2 cut(s)	522, 1249
Bsu15I	ATCGAT	1 cut(s)	2637
BsuRI	GGCC	4 cut(s)	396, 1797, 2479, 2704
BsuTUI	ATCGAT	1 cut(s)	2637
BtgI	CCRYGG	1 cut(s)	87
BtgZI	GCGATG	2 cut(s)	1829, 2496
BtsI	GCAGTG	3 cut(s)	492, 1353, 2531
BtsIMutI	CAGTG	4 cut(s)	492, 888, 1353, 2531
Cac8I	GCNNGC	6 cut(s)	84, 600, 1799, 2106, 2306, 2442
CaiI	CAGNNNCTG	2 cut(s)	2216, 2435
CciI	TCATGA	2 cut(s)	201, 1609
CfoI	GCGC	3 cut(s)	167, 285, 2459
Cfr10I	RCCGGY	1 cut(s)	1199
Cfr13I	GGNCC	4 cut(s)	76, 731, 783, 872
ClaI	ATCGAT	1 cut(s)	2637
CseI	GACGC	2 cut(s)	409, 1109
Csp6I	GTAC	7 cut(s)	156, 1131, 1203, 1280, 1723, 2245, 2470
CspAI	ACCGGT	1 cut(s)	1199
CviQI	GTAC	7 cut(s)	156, 1131, 1203, 1280, 1723, 2245, 2470
DdeI	CTNAG	7 cut(s)	327, 1451, 1815, 1928, 2436, 2538, 2619
DpnI	GATC	9 cut(s)	206, 524, 623, 960, 1041, 1251, 1542, 2276, 2385
DpnII	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
DraIII	CACNNNGTG	2 cut(s)	1855, 2329
Eam1104I	CTCTTC	2 cut(s)	26, 1757
EarI	CTCTTC	2 cut(s)	26, 1757
Ecl136II	GAGCTC	1 cut(s)	1219
Eco130I	CCWWGG	2 cut(s)	87, 2001
Eco147I	AGGCCT	2 cut(s)	1797, 2479
Eco24I	GRGCYC	1 cut(s)	1221
Eco31I	GGTCTC	1 cut(s)	2058
Eco47I	GGWCC	4 cut(s)	76, 731, 783, 872
Eco53kI	GAGCTC	1 cut(s)	1219
Eco57I	CTGAAG	2 cut(s)	821, 2252
Eco91I	GGTNACC	2 cut(s)	556, 1001
EcoICRI	GAGCTC	1 cut(s)	1219
EcoNI	CCTNNNNNAGG	2 cut(s)	1168, 2484
EcoO109I	RGGNCCY	2 cut(s)	731, 872
EcoO65I	GGTNACC	2 cut(s)	556, 1001
EcoRI	GAATTC	1 cut(s)	722
EcoRII	CCWGG	2 cut(s)	158, 2308
EcoT14I	CCWWGG	2 cut(s)	87, 2001
EcoT22I	ATGCAT	1 cut(s)	1513
EcoT38I	GRGCYC	1 cut(s)	1221
ErhI	CCWWGG	2 cut(s)	87, 2001
Esp3I	CGTCTC	1 cut(s)	2159
FaqI	GGGAC	6 cut(s)	43, 640, 676, 1872, 1936, 2687
FauI	CCCGC	1 cut(s)	2097
FbaI	TGATCA	3 cut(s)	204, 1540, 2274
FblI	GTMKAC	1 cut(s)	1933
Fnu4HI	GCNGC	6 cut(s)	266, 269, 1916, 2211, 2455, 2616
FriOI	GRGCYC	1 cut(s)	1221
Fsp4HI	GCNGC	6 cut(s)	266, 269, 1916, 2211, 2455, 2616
FspI	TGCGCA	1 cut(s)	284
GlaI	GCGC	3 cut(s)	166, 284, 2458
GluI	GCNGC	6 cut(s)	266, 269, 1916, 2211, 2455, 2616
GsuI	CTGGAG	4 cut(s)	1086, 1449, 2127, 2184
HaeIII	GGCC	4 cut(s)	396, 1797, 2479, 2704
HapII	CCGG	8 cut(s)	225, 374, 393, 455, 527, 618, 1200, 1776
HgaI	GACGC	2 cut(s)	409, 1109
HhaI	GCGC	3 cut(s)	167, 285, 2459
Hin6I	GCGC	3 cut(s)	165, 283, 2457
HinP1I	GCGC	3 cut(s)	165, 283, 2457
HincII	GTYRAC	1 cut(s)	696
HindII	GTYRAC	1 cut(s)	696
HindIII	AAGCTT	3 cut(s)	791, 1265, 1892
HpaII	CCGG	8 cut(s)	225, 374, 393, 455, 527, 618, 1200, 1776
HphI	GGTGA	5 cut(s)	202, 602, 1100, 1550, 2315
Hpy166II	GTNNAC	8 cut(s)	343, 593, 696, 1229, 1723, 1934, 2245, 2727
Hpy188I	TCNGA	7 cut(s)	148, 840, 1125, 1816, 1841, 2232, 2737
Hpy8I	GTNNAC	8 cut(s)	343, 593, 696, 1229, 1723, 1934, 2245, 2727
Hpy99I	CGWCG	1 cut(s)	425
HpyAV	CCTTC	9 cut(s)	181, 313, 581, 1721, 1952, 2085, 2227, 2605, 2715
HpyCH4III	ACNGT	5 cut(s)	1099, 1343, 1564, 1720, 2431
HpyF3I	CTNAG	7 cut(s)	327, 1451, 1815, 1928, 2436, 2538, 2619
HspAI	GCGC	3 cut(s)	165, 283, 2457
Kpn2I	TCCGGA	3 cut(s)	373, 454, 1775
Ksp22I	TGATCA	3 cut(s)	204, 1540, 2274
Kzo9I	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
LmnI	GCTCC	7 cut(s)	149, 276, 305, 1590, 2146, 2203, 2464
Lsp1109I	GCAGC	4 cut(s)	277, 2222, 2466, 2602
LweI	GCATC	1 cut(s)	2554
MalI	GATC	9 cut(s)	206, 524, 623, 960, 1041, 1251, 1542, 2276, 2385
MboI	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
MfeI	CAATTG	1 cut(s)	2292
MflI	RGATCY	2 cut(s)	522, 1249
MhlI	GDGCHC	3 cut(s)	33, 1221, 1911
MlyI	GAGTC	6 cut(s)	691, 1634, 1918, 2221, 2669, 2729
MmeI	TCCRAC	2 cut(s)	810, 1864
Mph1103I	ATGCAT	1 cut(s)	1513
MroI	TCCGGA	3 cut(s)	373, 454, 1775
MroXI	GAANNNNTTC	2 cut(s)	96, 722
MseI	TTAA	9 cut(s)	903, 1104, 1182, 1578, 1680, 2070, 2264, 2355, 2588
MslI	CAYNNNNRTG	3 cut(s)	717, 1536, 1975
MspA1I	CMGCKG	1 cut(s)	268
MspI	CCGG	8 cut(s)	225, 374, 393, 455, 527, 618, 1200, 1776
MspR9I	CCNGG	4 cut(s)	160, 527, 619, 2310
MunI	CAATTG	1 cut(s)	2292
Mva1269I	GAATGC	3 cut(s)	49, 2366, 2691
MvaI	CCWGG	2 cut(s)	160, 2310
MvnI	CGCG	1 cut(s)	420
NciI	CCSGG	2 cut(s)	527, 619
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
NlaIV	GGNNCC	7 cut(s)	145, 272, 301, 616, 784, 2199, 2466
NmuCI	GTSAC	7 cut(s)	190, 916, 967, 1088, 1666, 2321, 2329
NsbI	TGCGCA	1 cut(s)	284
NsiI	ATGCAT	1 cut(s)	1513
NspI	RCATGY	5 cut(s)	547, 957, 1077, 1120, 1915
OliI	CACNNNNGTG	1 cut(s)	1536
PagI	TCATGA	2 cut(s)	201, 1609
PceI	AGGCCT	2 cut(s)	1797, 2479
PciI	ACATGT	1 cut(s)	1073
PctI	GAATGC	3 cut(s)	49, 2366, 2691
PdmI	GAANNNNTTC	2 cut(s)	96, 722
PfeI	GAWTC	4 cut(s)	401, 451, 1772, 2642
PflMI	CCANNNNNTGG	1 cut(s)	1855
PfoI	TCCNGGA	2 cut(s)	525, 617
PinAI	ACCGGT	1 cut(s)	1199
PkrI	GCNGC	6 cut(s)	267, 270, 1917, 2212, 2456, 2617
PleI	GAGTC	6 cut(s)	691, 1633, 1918, 2221, 2669, 2728
PpsI	GAGTC	6 cut(s)	691, 1633, 1918, 2221, 2669, 2728
PpuMI	RGGWCCY	2 cut(s)	731, 872
PscI	ACATGT	1 cut(s)	1073
PshAI	GACNNNNGTC	1 cut(s)	2487
PshBI	ATTAAT	2 cut(s)	903, 2264
Psp124BI	GAGCTC	1 cut(s)	1221
Psp5II	RGGWCCY	2 cut(s)	731, 872
Psp6I	CCWGG	2 cut(s)	158, 2308
PspEI	GGTNACC	2 cut(s)	556, 1001
PspGI	CCWGG	2 cut(s)	158, 2308
PspN4I	GGNNCC	7 cut(s)	145, 272, 301, 616, 784, 2199, 2466
PspPI	GGNCC	4 cut(s)	76, 731, 783, 872
PspPPI	RGGWCCY	2 cut(s)	731, 872
PstI	CTGCAG	1 cut(s)	267
PstNI	CAGNNNCTG	2 cut(s)	2216, 2435
PsuI	RGATCY	2 cut(s)	522, 1249
RsaI	GTAC	7 cut(s)	157, 1132, 1204, 1281, 1724, 2246, 2471
RsaNI	GTAC	7 cut(s)	156, 1131, 1203, 1280, 1723, 2245, 2470
RseI	CAYNNNNRTG	3 cut(s)	717, 1536, 1975
SacI	GAGCTC	1 cut(s)	1221
SaqAI	TTAA	9 cut(s)	903, 1104, 1182, 1578, 1680, 2070, 2264, 2355, 2588
SatI	GCNGC	6 cut(s)	266, 269, 1916, 2211, 2455, 2616
Sau3AI	GATC	9 cut(s)	204, 522, 621, 958, 1039, 1249, 1540, 2274, 2383
Sau96I	GGNCC	4 cut(s)	76, 731, 783, 872
SchI	GAGTC	6 cut(s)	691, 1634, 1918, 2221, 2669, 2729
ScrFI	CCNGG	4 cut(s)	160, 527, 619, 2310
SduI	GDGCHC	3 cut(s)	33, 1221, 1911
SfaNI	GCATC	1 cut(s)	2554
SfcI	CTRYAG	1 cut(s)	263
SinI	GGWCC	4 cut(s)	76, 731, 783, 872
SmiMI	CAYNNNNRTG	3 cut(s)	717, 1536, 1975
SmlI	CTYRAG	3 cut(s)	101, 699, 1466
SmoI	CTYRAG	3 cut(s)	101, 699, 1466
SseBI	AGGCCT	2 cut(s)	1797, 2479
SsiI	CCGC	7 cut(s)	268, 418, 894, 1916, 2104, 2597, 2743
SspI	AATATT	2 cut(s)	2083, 2262
SstI	GAGCTC	1 cut(s)	1221
StuI	AGGCCT	2 cut(s)	1797, 2479
StyD4I	CCNGG	4 cut(s)	158, 525, 617, 2308
StyI	CCWWGG	2 cut(s)	87, 2001
TaaI	ACNGT	5 cut(s)	1099, 1343, 1564, 1720, 2431
TaqI	TCGA	5 cut(s)	399, 423, 585, 1291, 2637
TatI	WGTACW	1 cut(s)	2244
TauI	GCSGC	2 cut(s)	271, 1918
TfiI	GAWTC	4 cut(s)	401, 451, 1772, 2642
Tru1I	TTAA	9 cut(s)	903, 1104, 1182, 1578, 1680, 2070, 2264, 2355, 2588
Tru9I	TTAA	9 cut(s)	903, 1104, 1182, 1578, 1680, 2070, 2264, 2355, 2588
TscAI	CASTG	4 cut(s)	499, 895, 1360, 2531
TseFI	GTSAC	7 cut(s)	190, 916, 967, 1088, 1666, 2321, 2329
TseI	GCWGC	4 cut(s)	265, 2210, 2454, 2615
Tsp45I	GTSAC	7 cut(s)	190, 916, 967, 1088, 1666, 2321, 2329
TspGWI	ACGGA	2 cut(s)	350, 2236
TspRI	CASTG	4 cut(s)	499, 895, 1360, 2531
Van91I	CCANNNNNTGG	1 cut(s)	1855
VpaK11BI	GGWCC	4 cut(s)	76, 731, 783, 872
VspI	ATTAAT	2 cut(s)	903, 2264
XagI	CCTNNNNNAGG	2 cut(s)	1168, 2484
XapI	RAATTY	1 cut(s)	722
XceI	RCATGY	5 cut(s)	547, 957, 1077, 1120, 1915
XmiI	GTMKAC	1 cut(s)	1933
XmnI	GAANNNNTTC	2 cut(s)	96, 722
Zsp2I	ATGCAT	1 cut(s)	1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.