Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003113

Physical Location & Seq

Genomic Coordinates Forward (+)

1172945 .. 1175977

Gene Structure 3033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1015000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGATACTATACTCCTCTTTCCTTTTCCATTTTATTTCCTTCAATTTCTTTCAATCGTTACGACAGCTTGTTTTTCTCTGTTCCCAAACACTACCCAACCGAAAACCAGAGTATCATTCAAAGACCCATTTCTCCGCCGTTTCTCCTCCCATAAACCCTAGAGATTTCTGCTCTTCTTTTCTTTGTCAAAGTCTGTATCTTTTTTCTTTTCATCGACTTTCTTATATTTTTTCTGAAAAAAAAATGAAGGAACCCCAACTGGGTTTCTGGGGTTCTTTCGCCGTTCTGCTCCTTTTGTTTTTCTCGCTGTACCCACCAGTACACTCCCAGTCCGGCGGCGGCGGCGACGACGGAGCGGCCATGGAAGCACTCCGAAAAAGCATCGGCTCCAACAGTCTCGGGTGGTCCGGCACCGATTACTGCAAATGGGGAAAAGTGAGTTGCAAGGACGGCAAGGTTTTCAAAATCCAATTGGGTAACCAAAAACTCACCGGCACGCTGCCGCCGGAAATCCAAAAGCTTTCGAATTTGCAGCAGCTGGAAGTTCAGAACAACCAACTCACCGGGCCTTTTCCGAGCCTCTCCGGGGTGCAACCGCTTCAGGTCCTCCTCGTCCACGACAACAACATCTCGTCCTTCCCCTCCGATTTCTTCACCGGACTTACCTCCCTCGACAACATCAACATCGACTACAATCCCTTCGCTGCGTGGCAGATTCCCGACATTCTCAAAGATGCCACACAGCTGAAGGAATTCTCCGCCACCGAGACCAACCTCACCGGAAGAATTCCCGATATCTTCAGCAGTTCCAATTTCCCAGGTTTGACTGATCTACATTTGGCTTTCAATTACCTTGAAGGCGAATTGCTTGCTAGTTTTTCGGGTTCGAGTATTCAGTCCCTCTGGTTGAACGGCCAACAGGGCACCAATAGGCTTAATGGTACTATTGATGTGTTACAGAACATGACTTCTCTGCGTGAGGTTTGGTTACATGGTAATTATTTCACCGGTCCTATACCGGACTTGTCGAACTTAGGTTACTTGACCACTCTGAGTTTGAGGGATAACAAGCTCACCGGCGTTGTTCCCGCGTCTTTGTTGAATCTTAAATCCCTTACTTCTGTTAATTTGACCAACAATATGCTTCAAGGACCAATGCCCAAGTTTGGCGATGGGGTTCTGGTGGATATGACGGGGGTAAATAGTTTTTGCAGTGATAAGCCGGGTGTTGATTGCGACGCTCGTGTCAATGTATTGCTTTCGGTCGTCAAAGACATGGGTTATCCTACTGTTTTTGCAGATAGTTGGAAGGGGAACGATCCTTGTATTAACTGGATGGGAATTACGTGTAATGGTGGAAACATTACTGTTGTCAATTTTCGGAGCCTGGGTCTTTCGGGTACGATCTCTTCAAATTATTCTCTGCTTACCTCCTTGCGGACATTGAGACTTGACGATAATAACCTCACGGGTACCATACCAAAGGAGCTTACGCAACTGCCCAACCTTCAACAGATAGATGTTAGTAACAACCAACTTTTTGGTCAAGTACCAAAGTTTAAGAATGTGGACGTGAAAACAGATGGGAACCCTAATATTGGTCAGGATCATCCCCCTTCGCCAGCGACGCCTACAATTCCTAATTCACCGCCTGCCTCCCACTCAGATGGAGGTAAAAAATCTAGGACTGGGGTGGTTGTTGGGGCTGGCATCGGCTGTGTTGGCGGATTGGTTGTAGTTGGGTTTGTTGCTATCTGTCTACTTAAGAAAAAGCATAAGCATTCTGGCGGAGTGCAAAGTGCAAACGCAAGTAGGGGACCTAATGACATTCATGTGGTTGAGGCTGGAAGTATGGTCATTTCGATCCAAGCTTTGAGAGATGTGACCAATAATTTCAGCGAAAATAATGTATTAGGAAAAGGTGGTTTTGGAACTGTGTACAAAGGGGAGTTGCATGATGGGAAAAAGATTGCAGTGAAGAGGATGGAATCTGGAGTGGTGGCGGAGAAGGTTCTAAATGAGTTCAAGTCTGAGATTGCAGTTCTTACTAAAGTCCAACACCGCCACTTGGTTGGACTTCTTGGCTATTGTTTGGACGGAAACGAGAGGCTTCTTGTTTATGAATACATGCCTCAAGGGACTCTTAGTAGATACTTGTTCAACTGGAAAGAGGAAGGTCTGAAGCCACTTGAATGGACTAGACGGCTGACCATTGCCTTGGATGTTGCAAGAGGGGTTGAGTATCTCCACGGTTTAGCCAGCCAGACTTTCATTCACAGGGATCTTAAACCTTCGAACATTTTACTGGGAGATTATATGCGGGCTAAAGTTTCGGATTTTGGACTGGTTCGTCTTGTTCCAGAAGGGGAAGCCTCAATTGCGACAGGACTAGCTGGAACTTTTGGCTATTTGGCTCCAGAGTATGCAGGATTATTGGAAAGGTTAACAAAACCATTCAGCTCAGTATTTTATAGTGTCGTGTTGCAGACATTTTCCGCTTGTTCCATAATTAATGTAGCGTCTGTTCTGCGGTGCGTTTTCTTCTTGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

851

Amino Acids

93.01

Weight (kDa)

8.23

Isoelectric Point (pI)

32.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_4	PF12799	477 - 518	2.8e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	633 - 808	3e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	635 - 808	4.9e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01820
fragaria_vesca	FvH4_4g33170 FvH4_4g33170 FvH4_4g33171
malus_domestica	MD13G1017200.v1.1 MD16G1015000.v1.1 MD16G1015200.v1.1
prunus_persica	Prupe.1G336300_v2.0.a1 Prupe.1G336300_v2.0.a1
pyrus_communis	pycom13g01480 pycom16g01400
rosa_chinensis	RchiOBHm_Chr4g0442211 RchiOBHm_Chr4g0442221 RchiOBHm_Chr4g0442231
rosa_laevigata	RLG00000006022 RLG00000006023
rosa_multiflora	Rmu_co8222306.1_g000001 Rmu_sc0000124.1_g000060 Rmu_sc0000124.1_g000062 Rmu_sc0010284.1_g000002 Rmu_sc0010284.1_g000003
rosa_roxburghii	Rroxscaffold_5G00383140 Rroxscaffold_5G00383150
rosa_rugosa	Rorug04G0339700 Rorug04G0339800 Rorug04G0339900
rosa_samantha	Rh4AG391300 Rh4AG391400 Rh4BG405000 Rh4BG405100 Rh4CG420100 Rh4CG420200 Rh4DG398100 Rh4DG398200 Rh4DG398300
rosa_wichuraiana	Rw4G033820 Rw4G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1244, 2349
Acc65I	GGTACC	1 cut(s)	1472
AccB1I	GGYRCC	3 cut(s)	410, 923, 1472
AccBSI	CCGCTC	1 cut(s)	356
AccI	GTMKAC	1 cut(s)	1759
AccII	CGCG	1 cut(s)	1091
AclWI	GGATC	4 cut(s)	1313, 1614, 1858, 2289
AcoI	YGGCCR	2 cut(s)	357, 913
AcsI	RAATTY	3 cut(s)	526, 752, 786
AcuI	CTGAAG	4 cut(s)	584, 767, 784, 2201
AcyI	GRCGYC	1 cut(s)	1628
AfaI	GTAC	7 cut(s)	311, 321, 943, 1402, 1474, 1551, 1940
AfiI	CCNNNNNNNGG	6 cut(s)	260, 586, 1166, 1437, 1598, 2068
AflII	CTTAAG	1 cut(s)	1763
AflIII	ACRYGT	1 cut(s)	1346
AgeI	ACCGGT	1 cut(s)	1007
AjiI	CACGTC	1 cut(s)	1573
AjnI	CCWGG	2 cut(s)	817, 1386
AluBI	AGCT	9 cut(s)	67, 520, 538, 745, 1072, 1489, 1871, 2393, 2460
AluI	AGCT	9 cut(s)	67, 520, 538, 745, 1072, 1489, 1871, 2393, 2460
Alw26I	GTCTC	3 cut(s)	401, 761, 1441
AlwI	GGATC	4 cut(s)	1313, 1614, 1858, 2289
AlwNI	CAGNNNCTG	1 cut(s)	538
Ama87I	CYCGRG	1 cut(s)	398
AoxI	GGCC	3 cut(s)	357, 566, 913
ApeKI	GCWGC	4 cut(s)	499, 532, 535, 704
ApoI	RAATTY	3 cut(s)	526, 752, 786
AseI	ATTAAT	1 cut(s)	2511
AsiGI	ACCGGT	1 cut(s)	1007
Asp700I	GAANNNNTTC	1 cut(s)	752
Asp718I	GGTACC	1 cut(s)	1472
AspS9I	GGNCC	6 cut(s)	405, 566, 604, 1010, 1151, 1817
AsuC2I	CCSGG	3 cut(s)	565, 586, 1224
AsuHPI	GGTGA	7 cut(s)	481, 553, 646, 769, 997, 1066, 1638
AsuII	TTCGAA	2 cut(s)	524, 2294
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	5 cut(s)	405, 604, 1010, 1151, 1817
BaeGI	GKGCMC	1 cut(s)	926
BaeI	ACNNNNGTAYC	2 cut(s)	95, 128
BanI	GGYRCC	3 cut(s)	410, 923, 1472
BarI	GAAGNNNNNNTAC	2 cut(s)	1393, 1425
BauI	CACGAG	1 cut(s)	1242
BbvI	GCAGC	4 cut(s)	486, 544, 547, 691
BccI	CCATC	6 cut(s)	1166, 1330, 1577, 1661, 1952, 1978
BceAI	ACGGC	5 cut(s)	122, 266, 466, 928, 2219
BcgI	CGANNNNNNTGC	2 cut(s)	851, 885
BciT130I	CCWGG	2 cut(s)	819, 1388
BcnI	CCSGG	3 cut(s)	565, 586, 1224
BcoDI	GTCTC	3 cut(s)	401, 761, 1441
BfaI	CTAG	5 cut(s)	159, 873, 1683, 2199, 2390
BfmI	CTRYAG	1 cut(s)	2549
BfrI	CTTAAG	1 cut(s)	1763
BglI	GCCNNNNNGGC	1 cut(s)	921
BisI	GCNGC	9 cut(s)	337, 340, 343, 357, 500, 503, 533, 536, 705
BlsI	GCNGC	9 cut(s)	338, 341, 344, 358, 501, 504, 534, 537, 706
Bme1390I	CCNGG	5 cut(s)	565, 586, 819, 1224, 1388
Bme18I	GGWCC	5 cut(s)	405, 604, 1010, 1151, 1817
BmeT110I	CYCGRG	1 cut(s)	398
BmgBI	CACGTC	1 cut(s)	1573
BmgT120I	GGNCC	6 cut(s)	405, 566, 604, 1010, 1151, 1817
BmiI	GGNNCC	9 cut(s)	252, 388, 412, 925, 1385, 1474, 1589, 1818, 2415
BmrFI	CCNGG	5 cut(s)	565, 586, 819, 1224, 1388
BmrI	ACTGGG	4 cut(s)	269, 322, 1698, 2315
BmsI	GCATC	3 cut(s)	390, 724, 1719
BmuI	ACTGGG	4 cut(s)	269, 322, 1698, 2315
BpmI	CTGGAG	2 cut(s)	2013, 2400
Bpu14I	TTCGAA	2 cut(s)	524, 2294
BpuEI	CTTGAG	1 cut(s)	2118
BpuMI	CCSGG	3 cut(s)	565, 586, 1224
BsaAI	YACGTR	1 cut(s)	1347
BsaHI	GRCGYC	1 cut(s)	1628
BsaI	GGTCTC	1 cut(s)	761
BsaJI	CCNNGG	6 cut(s)	360, 585, 817, 1387, 2217, 2248
BsaWI	WCCGGW	4 cut(s)	656, 779, 1007, 1018
BsaXI	ACNNNNNCTCC	2 cut(s)	1375, 1405
Bsc4I	CCNNNNNNNGG	6 cut(s)	260, 586, 1166, 1437, 1598, 2068
Bse118I	RCCGGY	3 cut(s)	491, 1007, 1076
Bse1I	ACTGG	8 cut(s)	264, 317, 328, 1337, 1693, 2168, 2310, 2349
Bse3DI	GCAATG	1 cut(s)	2211
BseBI	CCWGG	2 cut(s)	819, 1388
BseDI	CCNNGG	6 cut(s)	360, 585, 817, 1387, 2217, 2248
BseGI	GGATG	4 cut(s)	1341, 1609, 1989, 2227
BseLI	CCNNNNNNNGG	6 cut(s)	260, 586, 1166, 1437, 1598, 2068
BseMI	GCAATG	1 cut(s)	2211
BseMII	CTCAG	4 cut(s)	1043, 1677, 2022, 2475
BseNI	ACTGG	8 cut(s)	264, 317, 328, 1337, 1693, 2168, 2310, 2349
BseRI	GAGGAG	3 cut(s)	4, 135, 599
BseSI	GKGCMC	1 cut(s)	926
BseXI	GCAGC	4 cut(s)	486, 544, 547, 691
Bsh1236I	CGCG	1 cut(s)	1091
Bsh1285I	CGRYCG	1 cut(s)	1266
BshFI	GGCC	3 cut(s)	359, 568, 915
BshNI	GGYRCC	3 cut(s)	410, 923, 1472
BshTI	ACCGGT	1 cut(s)	1007
BsiEI	CGRYCG	1 cut(s)	1266
BsiHKCI	CYCGRG	1 cut(s)	398
BslFI	GGGAC	3 cut(s)	883, 1830, 2152
BslI	CCNNNNNNNGG	6 cut(s)	260, 586, 1166, 1437, 1598, 2068
BsmAI	GTCTC	3 cut(s)	401, 761, 1441
BsmFI	GGGAC	3 cut(s)	883, 1830, 2152
BsmI	GAATGC	1 cut(s)	1780
BsnI	GGCC	3 cut(s)	359, 568, 915
Bso31I	GGTCTC	1 cut(s)	761
BsoBI	CYCGRG	1 cut(s)	398
Bsp119I	TTCGAA	2 cut(s)	524, 2294
Bsp1286I	GDGCHC	1 cut(s)	926
Bsp1407I	TGTACA	1 cut(s)	1938
Bsp143I	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
Bsp19I	CCATGG	1 cut(s)	360
BspANI	GGCC	3 cut(s)	359, 568, 915
BspCNI	CTCAG	4 cut(s)	1044, 1676, 2023, 2474
BspFNI	CGCG	1 cut(s)	1091
BspLI	GGNNCC	9 cut(s)	252, 388, 412, 925, 1385, 1474, 1589, 1818, 2415
BspPI	GGATC	4 cut(s)	1313, 1614, 1858, 2289
BspQI	GCTCTTC	1 cut(s)	178
BspT104I	TTCGAA	2 cut(s)	524, 2294
BspT107I	GGYRCC	3 cut(s)	410, 923, 1472
BspTI	CTTAAG	1 cut(s)	1763
BspTNI	GGTCTC	1 cut(s)	761
BsrBI	CCGCTC	1 cut(s)	356
BsrDI	GCAATG	1 cut(s)	2211
BsrFI	RCCGGY	3 cut(s)	491, 1007, 1076
BsrGI	TGTACA	1 cut(s)	1938
BsrI	ACTGG	8 cut(s)	264, 317, 328, 1337, 1693, 2168, 2310, 2349
BssAI	RCCGGY	3 cut(s)	491, 1007, 1076
BssECI	CCNNGG	6 cut(s)	360, 585, 817, 1387, 2217, 2248
BssMI	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
BssNI	GRCGYC	1 cut(s)	1628
BssSI	CACGAG	1 cut(s)	1242
BssT1I	CCWWGG	2 cut(s)	360, 2217
Bst2BI	CACGAG	1 cut(s)	1242
Bst2UI	CCWGG	2 cut(s)	819, 1388
Bst4CI	ACNGT	5 cut(s)	395, 1291, 1369, 1936, 2252
Bst6I	CTCTTC	3 cut(s)	178, 1414, 1973
BstACI	GRCGYC	1 cut(s)	1628
BstAFI	CTTAAG	1 cut(s)	1763
BstAUI	TGTACA	1 cut(s)	1938
BstBAI	YACGTR	1 cut(s)	1347
BstBI	TTCGAA	2 cut(s)	524, 2294
BstC8I	GCNNGC	7 cut(s)	497, 870, 1623, 1653, 1708, 2260, 2322
BstDEI	CTNAG	6 cut(s)	1033, 1052, 1663, 2031, 2144, 2461
BstDSI	CCRYGG	2 cut(s)	360, 2248
BstEII	GGTNACC	1 cut(s)	476
BstF5I	GGATG	4 cut(s)	1341, 1609, 1989, 2227
BstFNI	CGCG	1 cut(s)	1091
BstKTI	GATC	6 cut(s)	832, 1321, 1407, 1609, 1866, 2284
BstMAI	GTCTC	3 cut(s)	401, 761, 1441
BstMBI	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
BstMCI	CGRYCG	1 cut(s)	1266
BstMWI	GCNNNNNNNGC	7 cut(s)	342, 365, 450, 921, 1627, 1722, 2378
BstNI	CCWGG	2 cut(s)	819, 1388
BstNSI	RCATGY	1 cut(s)	2131
BstPI	GGTNACC	1 cut(s)	476
BstSCI	CCNGG	5 cut(s)	563, 584, 817, 1222, 1386
BstSFI	CTRYAG	1 cut(s)	2549
BstSLI	GKGCMC	1 cut(s)	926
BstUI	CGCG	1 cut(s)	1091
BstV1I	GCAGC	4 cut(s)	486, 544, 547, 691
BstX2I	RGATCY	1 cut(s)	2281
BstXI	CCANNNNNNTGG	5 cut(s)	1541, 1667, 2072, 2193, 2218
BstYI	RGATCY	1 cut(s)	2281
BsuRI	GGCC	3 cut(s)	359, 568, 915
BtgI	CCRYGG	2 cut(s)	360, 2248
BtgZI	GCGATG	1 cut(s)	1185
BtrI	CACGTC	1 cut(s)	1573
BtsCI	GGATG	4 cut(s)	1341, 1609, 1989, 2227
BtsI	GCAGTG	2 cut(s)	1219, 1980
BtsIMutI	CAGTG	2 cut(s)	1219, 1980
Cac8I	GCNNGC	7 cut(s)	497, 870, 1623, 1653, 1708, 2260, 2322
CaiI	CAGNNNCTG	1 cut(s)	538
Cfr10I	RCCGGY	3 cut(s)	491, 1007, 1076
Cfr13I	GGNCC	6 cut(s)	405, 566, 604, 1010, 1151, 1817
CseI	GACGC	4 cut(s)	1080, 1247, 1636, 2508
Csp6I	GTAC	7 cut(s)	310, 320, 942, 1401, 1473, 1550, 1939
CspAI	ACCGGT	1 cut(s)	1007
CviAII	CATG	7 cut(s)	361, 964, 992, 1276, 1832, 1955, 2128
CviQI	GTAC	7 cut(s)	310, 320, 942, 1401, 1473, 1550, 1939
DdeI	CTNAG	6 cut(s)	1033, 1052, 1663, 2031, 2144, 2461
DpnI	GATC	6 cut(s)	831, 1320, 1406, 1608, 1865, 2283
DpnII	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
DrdI	GACNNNNNNGTC	2 cut(s)	1244, 2349
DseDI	GACNNNNNNGTC	2 cut(s)	1244, 2349
EaeI	YGGCCR	2 cut(s)	357, 913
Eam1104I	CTCTTC	3 cut(s)	178, 1414, 1973
EarI	CTCTTC	3 cut(s)	178, 1414, 1973
EciI	GGCGGA	5 cut(s)	124, 748, 1740, 1803, 2018
Eco130I	CCWWGG	2 cut(s)	360, 2217
Eco31I	GGTCTC	1 cut(s)	761
Eco32I	GATATC	1 cut(s)	796
Eco47I	GGWCC	5 cut(s)	405, 604, 1010, 1151, 1817
Eco57I	CTGAAG	4 cut(s)	584, 767, 784, 2201
Eco88I	CYCGRG	1 cut(s)	398
Eco91I	GGTNACC	1 cut(s)	476
EcoO109I	RGGNCCY	2 cut(s)	604, 1817
EcoO65I	GGTNACC	1 cut(s)	476
EcoRI	GAATTC	2 cut(s)	752, 786
EcoRII	CCWGG	2 cut(s)	817, 1386
EcoRV	GATATC	1 cut(s)	796
EcoT14I	CCWWGG	2 cut(s)	360, 2217
ErhI	CCWWGG	2 cut(s)	360, 2217
FaeI	CATG	7 cut(s)	364, 967, 995, 1279, 1835, 1958, 2131
FalI	AAGNNNNNCTT	2 cut(s)	2127, 2159
FaqI	GGGAC	3 cut(s)	883, 1830, 2152
FatI	CATG	7 cut(s)	360, 963, 991, 1275, 1831, 1954, 2127
FauI	CCCGC	2 cut(s)	1096, 2313
FblI	GTMKAC	1 cut(s)	1759
Fnu4HI	GCNGC	9 cut(s)	337, 340, 343, 357, 500, 503, 533, 536, 705
FokI	GGATG	4 cut(s)	1348, 1596, 1996, 2234
Fsp4HI	GCNGC	9 cut(s)	337, 340, 343, 357, 500, 503, 533, 536, 705
FspBI	CTAG	5 cut(s)	159, 873, 1683, 2199, 2390
GluI	GCNGC	9 cut(s)	337, 340, 343, 357, 500, 503, 533, 536, 705
GsuI	CTGGAG	2 cut(s)	2013, 2400
HaeIII	GGCC	3 cut(s)	359, 568, 915
HgaI	GACGC	4 cut(s)	1080, 1247, 1636, 2508
Hin1I	GRCGYC	1 cut(s)	1628
Hin1II	CATG	7 cut(s)	364, 967, 995, 1279, 1835, 1958, 2131
HincII	GTYRAC	1 cut(s)	2445
HindII	GTYRAC	1 cut(s)	2445
HindIII	AAGCTT	2 cut(s)	518, 1869
HinfI	GANTC	4 cut(s)	715, 1102, 1988, 2140
HpaI	GTTAAC	1 cut(s)	2445
HphI	GGTGA	7 cut(s)	481, 553, 646, 769, 997, 1066, 1638
Hpy166II	GTNNAC	6 cut(s)	322, 616, 1570, 1760, 1939, 2445
Hpy188III	TCNNGA	6 cut(s)	719, 791, 1604, 1992, 2360, 2417
Hpy8I	GTNNAC	6 cut(s)	322, 616, 1570, 1760, 1939, 2445
Hpy99I	CGWCG	4 cut(s)	350, 353, 1241, 1630
HpyCH4III	ACNGT	5 cut(s)	395, 1291, 1369, 1936, 2252
HpyCH4IV	ACGT	2 cut(s)	1346, 1572
HpyF10VI	GCNNNNNNNGC	7 cut(s)	342, 365, 450, 921, 1627, 1722, 2378
HpyF3I	CTNAG	6 cut(s)	1033, 1052, 1663, 2031, 2144, 2461
HpySE526I	ACGT	2 cut(s)	1346, 1572
Hsp92I	GRCGYC	1 cut(s)	1628
Hsp92II	CATG	7 cut(s)	364, 967, 995, 1279, 1835, 1958, 2131
KpnI	GGTACC	1 cut(s)	1476
KspAI	GTTAAC	1 cut(s)	2445
Kzo9I	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
LguI	GCTCTTC	1 cut(s)	178
LmnI	GCTCC	6 cut(s)	294, 353, 392, 1383, 1486, 2419
Lsp1109I	GCAGC	4 cut(s)	486, 544, 547, 691
LweI	GCATC	3 cut(s)	390, 724, 1719
MaeI	CTAG	5 cut(s)	159, 873, 1683, 2199, 2390
MaeII	ACGT	2 cut(s)	1346, 1572
MaeIII	GTNAC	7 cut(s)	57, 476, 954, 987, 1037, 1526, 1882
MalI	GATC	6 cut(s)	831, 1320, 1406, 1608, 1865, 2283
MbiI	CCGCTC	1 cut(s)	356
MboI	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
MboII	GAAGA	7 cut(s)	165, 643, 790, 795, 1401, 1990, 2533
MfeI	CAATTG	2 cut(s)	470, 2376
MflI	RGATCY	1 cut(s)	2281
MhlI	GDGCHC	1 cut(s)	926
MlyI	GAGTC	1 cut(s)	2134
MmeI	TCCRAC	4 cut(s)	414, 1286, 2053, 2080
MroXI	GAANNNNTTC	1 cut(s)	752
MseI	TTAA	9 cut(s)	936, 1107, 1125, 1329, 1560, 1764, 2286, 2444, 2511
MslI	CAYNNNNRTG	3 cut(s)	1665, 1832, 2191
MspA1I	CMGCKG	2 cut(s)	538, 745
MspCI	CTTAAG	1 cut(s)	1763
MspR9I	CCNGG	5 cut(s)	565, 586, 819, 1224, 1388
MunI	CAATTG	2 cut(s)	470, 2376
Mva1269I	GAATGC	1 cut(s)	1780
MvaI	CCWGG	2 cut(s)	819, 1388
MvnI	CGCG	1 cut(s)	1091
MwoI	GCNNNNNNNGC	7 cut(s)	342, 365, 450, 921, 1627, 1722, 2378
NciI	CCSGG	3 cut(s)	565, 586, 1224
NcoI	CCATGG	1 cut(s)	360
NdeII	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
NlaIII	CATG	7 cut(s)	364, 967, 995, 1279, 1835, 1958, 2131
NlaIV	GGNNCC	9 cut(s)	252, 388, 412, 925, 1385, 1474, 1589, 1818, 2415
NmuCI	GTSAC	1 cut(s)	1882
NspI	RCATGY	1 cut(s)	2131
NspV	TTCGAA	2 cut(s)	524, 2294
PciSI	GCTCTTC	1 cut(s)	178
PctI	GAATGC	1 cut(s)	1780
PdmI	GAANNNNTTC	1 cut(s)	752
PfeI	GAWTC	3 cut(s)	715, 1102, 1988
PinAI	ACCGGT	1 cut(s)	1007
PkrI	GCNGC	9 cut(s)	338, 341, 344, 358, 501, 504, 534, 537, 706
PleI	GAGTC	1 cut(s)	2134
PpsI	GAGTC	1 cut(s)	2134
Ppu21I	YACGTR	1 cut(s)	1347
PpuMI	RGGWCCY	2 cut(s)	604, 1817
PshBI	ATTAAT	1 cut(s)	2511
Psp5II	RGGWCCY	2 cut(s)	604, 1817
Psp6I	CCWGG	2 cut(s)	817, 1386
PspEI	GGTNACC	1 cut(s)	476
PspGI	CCWGG	2 cut(s)	817, 1386
PspN4I	GGNNCC	9 cut(s)	252, 388, 412, 925, 1385, 1474, 1589, 1818, 2415
PspPI	GGNCC	6 cut(s)	405, 566, 604, 1010, 1151, 1817
PspPPI	RGGWCCY	2 cut(s)	604, 1817
PsrI	GAACNNNNNNTAC	4 cut(s)	1022, 1054, 2508, 2540
PstNI	CAGNNNCTG	1 cut(s)	538
PsuI	RGATCY	1 cut(s)	2281
PvuII	CAGCTG	2 cut(s)	538, 745
RsaI	GTAC	7 cut(s)	311, 321, 943, 1402, 1474, 1551, 1940
RsaNI	GTAC	7 cut(s)	310, 320, 942, 1401, 1473, 1550, 1939
RseI	CAYNNNNRTG	3 cut(s)	1665, 1832, 2191
SapI	GCTCTTC	1 cut(s)	178
SaqAI	TTAA	9 cut(s)	936, 1107, 1125, 1329, 1560, 1764, 2286, 2444, 2511
SatI	GCNGC	9 cut(s)	337, 340, 343, 357, 500, 503, 533, 536, 705
Sau3AI	GATC	6 cut(s)	829, 1318, 1404, 1606, 1863, 2281
Sau96I	GGNCC	6 cut(s)	405, 566, 604, 1010, 1151, 1817
SchI	GAGTC	1 cut(s)	2134
ScrFI	CCNGG	5 cut(s)	565, 586, 819, 1224, 1388
SduI	GDGCHC	1 cut(s)	926
SfaNI	GCATC	3 cut(s)	390, 724, 1719
SfcI	CTRYAG	1 cut(s)	2549
SfuI	TTCGAA	2 cut(s)	524, 2294
SgrAI	CRCCGGYG	1 cut(s)	1076
SinI	GGWCC	5 cut(s)	405, 604, 1010, 1151, 1817
SmiMI	CAYNNNNRTG	3 cut(s)	1665, 1832, 2191
SmlI	CTYRAG	2 cut(s)	1763, 2133
SmoI	CTYRAG	2 cut(s)	1763, 2133
SspI	AATATT	1 cut(s)	1597
SspMI	CTAG	5 cut(s)	159, 873, 1683, 2199, 2390
StyD4I	CCNGG	5 cut(s)	563, 584, 817, 1222, 1386
StyI	CCWWGG	2 cut(s)	360, 2217
TaaI	ACNGT	5 cut(s)	395, 1291, 1369, 1936, 2252
TaiI	ACGT	2 cut(s)	1349, 1575
TaqI	TCGA	8 cut(s)	214, 524, 672, 687, 887, 1028, 1862, 2294
TaqII	GACCGA	1 cut(s)	1252
TatI	WGTACW	2 cut(s)	319, 1938
TauI	GCSGC	5 cut(s)	339, 342, 345, 359, 505
TfiI	GAWTC	3 cut(s)	715, 1102, 1988
Tru1I	TTAA	9 cut(s)	936, 1107, 1125, 1329, 1560, 1764, 2286, 2444, 2511
Tru9I	TTAA	9 cut(s)	936, 1107, 1125, 1329, 1560, 1764, 2286, 2444, 2511
TscAI	CASTG	2 cut(s)	1219, 1980
TseFI	GTSAC	1 cut(s)	1882
TseI	GCWGC	4 cut(s)	499, 532, 535, 704
Tsp45I	GTSAC	1 cut(s)	1882
TspDTI	ATGAA	5 cut(s)	200, 260, 1820, 2136, 2260
TspGWI	ACGGA	2 cut(s)	366, 2112
TspRI	CASTG	2 cut(s)	1219, 1980
Vha464I	CTTAAG	1 cut(s)	1763
VpaK11BI	GGWCC	5 cut(s)	405, 604, 1010, 1151, 1817
VspI	ATTAAT	1 cut(s)	2511
XapI	RAATTY	3 cut(s)	526, 752, 786
XceI	RCATGY	1 cut(s)	2131
XmiI	GTMKAC	1 cut(s)	1759
XmnI	GAANNNNTTC	1 cut(s)	752
XspI	CTAG	5 cut(s)	159, 873, 1683, 2199, 2390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.