Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010284.1

Orthogroup ID

OG0003113

Physical Location & Seq

Genomic Coordinates Reverse (-)

5568 .. 9093

Gene Structure 3526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010284.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

atgggtttccggggctgtgttattctccgtttcctgttcctgttcctctcactgtgtgcgcctgtgcagtcacagagcgaggaccagccagccatggaagacatcctgaaaagcttgacgtccaaactgccggccaagtggaaggccggcaccgattgctgcacctgggccggagtctcgtgcgacaatagcaacaaggtaaccggcctcgtaatcaaggagttaaatctgacgggtaagctcagcccggcggttcgaaacctcacgtcgttgcagagtctgcaacttatgcggaacagcctcaccggagacttcccgagtctcaaaggcctcggttcgcttcagaaggtttacgccaacgagaacggtttcacttcttttccggcgggtgatttcttctccggcctctcttcccttcaggaaatcttcatcggtcagaatcccttctccccgtggcagattccggagagtgtcaaacaggcctcgagtctgacgacatttttagctggtggagccaacattacaggtacaatcccggattactttaactccacctatatgccgagtttgacagacttggatttggattcgaataagctgcaaggcgggttgccttcgagtttcgctggttcgaatatcaagacacttaggttggagaacaataagatccttagtggcactcttgatgtgttacagaacatgaccgagctgaatgaagttcatttaaatgggaataagttcacaggtcctttgccagatttttcgaatatcaagaacttaacgttctttgacgtgagggataatcagctcactggtgttattccttcttcattggtgaatcaaccctccctagctaatgttaccttgagcaacaatttgtttcagggccccaagcccaagttcaagagtggtgttgggttggatatggatgtaggcaatatgttttgcagtcctaatgtcggtcatgattgcgatccccgtgttgatatattgctttcgattgccagagacatgggttaccctactacgtttgcacagaattggatgggaaatgatccttgtgctgccaatggtggttcttggcttggcttgacatgttcaggagggaacattaccagaatcagctttggtaaaaggggtctggcaggtacaatatcctctaacttttccttgcttacatcgttgacagatttgagactcaatgataatttcttgactgggactatacctgtggagcttacgaaacttccaaaccttaagaatgtagatttctcaaacaataggctctatggtaaagtacctgtgtttcgagatggtgtggttgtgaaattagagggaaaccctgatataggtaaggaccagcctagcacgcctagcacacctccgggtccggttccggctcctaatggtggaggtgacaagaaatcccagactggtgtgattattggggttgttgtcggatgtattgttggattggttctagttggggttctcgtcttttgtatgctgaagaaaaaacagaggcgttctggtaaagtgcaaagtccaaattcgttggttatacaccctcgtcattctggtgatcaaaatgctgtcaaaatttcagttgctaataggttaaatagcactggaaatgagtcttacaatagtcccccaaataatggacctaatgacatccaggttgaggctggaaatatgatcatttctatccaagttttgaggagtgtgaccaataacttcaatgaagataagatattgggaaaaggtgggtttggaactgtgtatggaggagaattgcatgatggaacaaaaattgcagtgaagagaatggaatccggagtggtagctgagaaaggcctgcatgagttcaagtctgagattgcagttcttactaaggtccgacatcgtcacttagtgggacttcttggatattgtttggatgggaatgagaggcttcttgtctatgagcacatgccgcaggggactcttagtagacatttgttcaactggaaagaagaagggctggagccacttgaatggactagaagactgaccattgccttggatgttgcgagaggggttgaatacctgcacggtttggccaacgaaattttcattcatagagaccttaagccttctaatatattacttggagatgatatgcgggcgaaagtggcagactttggattggttcgtcttgctccagcagggaaagcctctatagagacaagactagcaggaacttttggctatttggctccagaatatgcagcaaccggacggatgacactcaaggtagatgtgtacagctttggtgtaatattaatggagttgatcaccggtagaaaggcaattgacgaaagccagcctgaggagagttgtcacctagtgacatggtttcgtagaaagctcattaaaacagatgcactccctgagattgttgatccaaccattgatgtcaatgaggaaactctttctagtataagcacggtagctcagcttgccggtcattgcagcgcaagggagccgtaccaaaggcctgacatgggtcatgcagtcaatgtactttcatcacttgttgagcagtggaagccctctaaacaagaagattttgatgacatggatgcaatcaactttgatgtgccactaaatgaagcagtaaagaggtggcaggctgctgagggcaaaagcaacatcgatgactcttcatcttcatcaatatttcccagcggggatactacccagaccagcatacctaaccggccttctggatttgctgagtcttttacatcatcagatgggcgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

935

Amino Acids

101.41

Weight (kDa)

6.25

Isoelectric Point (pI)

40.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01820
fragaria_vesca	FvH4_4g33170 FvH4_4g33170 FvH4_4g33171
malus_domestica	MD13G1017200.v1.1 MD16G1015000.v1.1 MD16G1015200.v1.1
prunus_persica	Prupe.1G336300_v2.0.a1 Prupe.1G336300_v2.0.a1
pyrus_communis	pycom13g01480 pycom16g01400
rosa_chinensis	RchiOBHm_Chr4g0442211 RchiOBHm_Chr4g0442221 RchiOBHm_Chr4g0442231
rosa_laevigata	RLG00000006022 RLG00000006023
rosa_multiflora	Rmu_co8222306.1_g000001 Rmu_sc0000124.1_g000060 Rmu_sc0000124.1_g000062 Rmu_sc0010284.1_g000002 Rmu_sc0010284.1_g000003
rosa_roxburghii	Rroxscaffold_5G00383140 Rroxscaffold_5G00383150
rosa_rugosa	Rorug04G0339700 Rorug04G0339800 Rorug04G0339900
rosa_samantha	Rh4AG391300 Rh4AG391400 Rh4BG405000 Rh4BG405100 Rh4CG420100 Rh4CG420200 Rh4DG398100 Rh4DG398200 Rh4DG398300
rosa_wichuraiana	Rw4G033820 Rw4G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	122
Acc36I	ACCTGC	2 cut(s)	1136, 2097
AccB1I	GGYRCC	1 cut(s)	149
AccB7I	CCANNNNNTGG	1 cut(s)	1661
AccI	GTMKAC	1 cut(s)	1993
AccIII	TCCGGA	2 cut(s)	463, 1835
AciI	CCGC	7 cut(s)	251, 292, 386, 606, 1976, 2164, 2730
AclI	AACGTT	1 cut(s)	782
AclWI	GGATC	4 cut(s)	661, 968, 1049, 2438
AcoI	YGGCCR	2 cut(s)	132, 2100
AcsI	RAATTY	3 cut(s)	1549, 1599, 2109
AcuI	CTGAAG	3 cut(s)	326, 401, 1529
AcyI	GRCGYC	1 cut(s)	119
AdeI	CACNNNGTG	3 cut(s)	56, 1915, 2389
AfaI	GTAC	6 cut(s)	529, 1150, 1299, 2306, 2531, 2565
AfiI	CCNNNNNNNGG	7 cut(s)	959, 1349, 1409, 1661, 1684, 2371, 2546
AflII	CTTAAG	2 cut(s)	1256, 2129
AflIII	ACRYGT	1 cut(s)	1094
AgeI	ACCGGT	1 cut(s)	2339
AgsI	TTSAA	6 cut(s)	904, 1741, 1870, 2005, 2036, 2084
AjiI	CACGTC	2 cut(s)	267, 793
AjnI	CCWGG	2 cut(s)	164, 1677
AjuI	GAANNNNNNNTTGG	4 cut(s)	884, 916, 2096, 2128
Alw21I	GWGCWC	1 cut(s)	1971
Alw26I	GTCTC	7 cut(s)	181, 303, 326, 1002, 1189, 2118, 2219
AlwI	GGATC	4 cut(s)	661, 968, 1049, 2438
AlwNI	CAGNNNCTG	1 cut(s)	280
Ama87I	CYCGRG	2 cut(s)	316, 484
Aor13HI	TCCGGA	2 cut(s)	463, 1835
ApaI	GGGCCC	1 cut(s)	890
ApeKI	GCWGC	6 cut(s)	159, 598, 1064, 2270, 2514, 2675
ApoI	RAATTY	3 cut(s)	1549, 1599, 2109
AseI	ATTAAT	1 cut(s)	2324
AsiGI	ACCGGT	1 cut(s)	2339
Asp700I	GAANNNNTTC	3 cut(s)	368, 443, 737
AspLEI	GCGC	2 cut(s)	61, 2519
AspS9I	GGNCC	9 cut(s)	82, 168, 746, 886, 887, 1357, 1388, 1664, 1897
AsuC2I	CCSGG	4 cut(s)	11, 248, 536, 1386
AsuHPI	GGTGA	7 cut(s)	295, 401, 847, 1427, 1592, 2329, 2375
AsuII	TTCGAA	4 cut(s)	256, 590, 632, 764
AvaI	CYCGRG	2 cut(s)	316, 484
AvaII	GGWCC	6 cut(s)	82, 746, 1357, 1388, 1664, 1897
AxyI	CCTNAGG	1 cut(s)	2370
BaeGI	GKGCMC	1 cut(s)	890
BalI	TGGCCA	1 cut(s)	2102
BanI	GGYRCC	1 cut(s)	149
BanII	GRGCYC	1 cut(s)	890
BauI	CACGAG	1 cut(s)	178
BbsI	GAAGAC	2 cut(s)	105, 2053
Bbv12I	GWGCWC	1 cut(s)	1971
BbvCI	CCTCAGC	1 cut(s)	2679
BbvI	GCAGC	6 cut(s)	146, 585, 1051, 2282, 2526, 2662
BccI	CCATC	5 cut(s)	1039, 1307, 1796, 1934, 2792
BceAI	ACGGC	1 cut(s)	2512
BcgI	CGANNNNNNTGC	2 cut(s)	580, 614
BciT130I	CCWGG	2 cut(s)	166, 1679
BciVI	GTATCC	1 cut(s)	2728
BclI	TGATCA	3 cut(s)	1582, 1698, 2334
BcnI	CCSGG	4 cut(s)	11, 248, 536, 1386
BcoDI	GTCTC	7 cut(s)	181, 303, 326, 1002, 1189, 2118, 2219
BfaI	CTAG	8 cut(s)	851, 1365, 1374, 1481, 2043, 2234, 2387, 2478
BfmI	CTRYAG	1 cut(s)	2220
BfrI	CTTAAG	2 cut(s)	1256, 2129
BfuAI	ACCTGC	2 cut(s)	1136, 2097
BfuI	GTATCC	1 cut(s)	2728
BisI	GCNGC	7 cut(s)	160, 599, 1065, 1976, 2271, 2515, 2676
BlpI	GCTNAGC	2 cut(s)	242, 2496
BlsI	GCNGC	7 cut(s)	161, 600, 1066, 1977, 2272, 2516, 2677
Bme1390I	CCNGG	6 cut(s)	11, 166, 248, 536, 1386, 1679
Bme18I	GGWCC	6 cut(s)	82, 746, 1357, 1388, 1664, 1897
BmeT110I	CYCGRG	2 cut(s)	316, 484
BmgBI	CACGTC	2 cut(s)	267, 793
BmgT120I	GGNCC	9 cut(s)	82, 168, 746, 886, 887, 1357, 1388, 1664, 1897
BmrFI	CCNGG	6 cut(s)	11, 166, 248, 536, 1386, 1679
BmrI	ACTGGG	1 cut(s)	1227
BmsI	GCATC	2 cut(s)	2413, 2614
BmuI	ACTGGG	1 cut(s)	1227
BoxI	GACNNNNGTC	1 cut(s)	2547
BpiI	GAAGAC	2 cut(s)	105, 2053
BpmI	CTGGAG	3 cut(s)	2045, 2187, 2244
Bpu10I	CCTNAGC	1 cut(s)	2679
Bpu1102I	GCTNAGC	2 cut(s)	242, 2496
Bpu14I	TTCGAA	4 cut(s)	256, 590, 632, 764
BpuEI	CTTGAG	2 cut(s)	886, 2276
BpuMI	CCSGG	4 cut(s)	11, 248, 536, 1386
Bsa29I	ATCGAT	1 cut(s)	2697
BsaBI	GATNNNNATC	1 cut(s)	972
BsaHI	GRCGYC	1 cut(s)	119
BsaI	GGTCTC	1 cut(s)	2118
BsaJI	CCNNGG	6 cut(s)	10, 93, 165, 331, 452, 2061
BsaWI	WCCGGW	6 cut(s)	305, 463, 1390, 1835, 2276, 2339
BsaXI	ACNNNNNCTCC	2 cut(s)	533, 563
Bsc4I	CCNNNNNNNGG	7 cut(s)	959, 1349, 1409, 1661, 1684, 2371, 2546
Bse118I	RCCGGY	6 cut(s)	130, 146, 203, 2339, 2504, 2760
Bse1I	ACTGG	5 cut(s)	817, 1222, 1438, 1633, 2012
Bse21I	CCTNAGG	1 cut(s)	2370
Bse3DI	GCAATG	2 cut(s)	2055, 2509
Bse8I	GATNNNNATC	1 cut(s)	972
BseAI	TCCGGA	2 cut(s)	463, 1835
BseBI	CCWGG	2 cut(s)	166, 1679
BseCI	ATCGAT	1 cut(s)	2697
BseDI	CCNNGG	6 cut(s)	10, 93, 165, 331, 452, 2061
BseGI	GGATG	9 cut(s)	102, 934, 1050, 1466, 1674, 1945, 2071, 2289, 2629
BseJI	GATNNNNATC	1 cut(s)	972
BseLI	CCNNNNNNNGG	7 cut(s)	959, 1349, 1409, 1661, 1684, 2371, 2546
BseMI	GCAATG	2 cut(s)	2055, 2509
BseMII	CTCAG	8 cut(s)	256, 1839, 1866, 2361, 2424, 2510, 2670, 2769
BseNI	ACTGG	5 cut(s)	817, 1222, 1438, 1633, 2012
BseRI	GAGGAG	3 cut(s)	1735, 1803, 2387
BseSI	GKGCMC	1 cut(s)	890
BseXI	GCAGC	6 cut(s)	146, 585, 1051, 2282, 2526, 2662
BseYI	CCCAGC	1 cut(s)	2726
BsgI	GTGCAG	3 cut(s)	86, 145, 2075
BshNI	GGYRCC	1 cut(s)	149
BshTI	ACCGGT	1 cut(s)	2339
BshVI	ATCGAT	1 cut(s)	2697
BsiHKAI	GWGCWC	1 cut(s)	1971
BsiHKCI	CYCGRG	2 cut(s)	316, 484
BslFI	GGGAC	4 cut(s)	1234, 1635, 1932, 1996
BslI	CCNNNNNNNGG	7 cut(s)	959, 1349, 1409, 1661, 1684, 2371, 2546
BsmAI	GTCTC	7 cut(s)	181, 303, 326, 1002, 1189, 2118, 2219
BsmFI	GGGAC	4 cut(s)	1234, 1635, 1932, 1996
Bso31I	GGTCTC	1 cut(s)	2118
BsoBI	CYCGRG	2 cut(s)	316, 484
Bsp119I	TTCGAA	4 cut(s)	256, 590, 632, 764
Bsp120I	GGGCCC	1 cut(s)	886
Bsp1286I	GDGCHC	2 cut(s)	890, 1971
Bsp13I	TCCGGA	2 cut(s)	463, 1835
Bsp1407I	TGTACA	1 cut(s)	2304
Bsp143I	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
Bsp1720I	GCTNAGC	2 cut(s)	242, 2496
Bsp19I	CCATGG	1 cut(s)	93
BspACI	CCGC	7 cut(s)	251, 292, 386, 606, 1976, 2164, 2730
BspCNI	CTCAG	8 cut(s)	255, 1840, 1867, 2362, 2425, 2509, 2671, 2770
BspDI	ATCGAT	1 cut(s)	2697
BspEI	TCCGGA	2 cut(s)	463, 1835
BspHI	TCATGA	1 cut(s)	964
BspMI	ACCTGC	2 cut(s)	1136, 2097
BspPI	GGATC	4 cut(s)	661, 968, 1049, 2438
BspT104I	TTCGAA	4 cut(s)	256, 590, 632, 764
BspT107I	GGYRCC	1 cut(s)	149
BspTI	CTTAAG	2 cut(s)	1256, 2129
BspTNI	GGTCTC	1 cut(s)	2118
BsrDI	GCAATG	2 cut(s)	2055, 2509
BsrFI	RCCGGY	6 cut(s)	130, 146, 203, 2339, 2504, 2760
BsrGI	TGTACA	1 cut(s)	2304
BsrI	ACTGG	5 cut(s)	817, 1222, 1438, 1633, 2012
BssAI	RCCGGY	6 cut(s)	130, 146, 203, 2339, 2504, 2760
BssECI	CCNNGG	6 cut(s)	10, 93, 165, 331, 452, 2061
BssMI	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
BssNI	GRCGYC	1 cut(s)	119
BssSI	CACGAG	1 cut(s)	178
BssT1I	CCWWGG	2 cut(s)	93, 2061
Bst2BI	CACGAG	1 cut(s)	178
Bst2UI	CCWGG	2 cut(s)	166, 1679
Bst4CI	ACNGT	5 cut(s)	54, 368, 1780, 2096, 2491
Bst6I	CTCTTC	3 cut(s)	415, 1817, 2710
BstACI	GRCGYC	1 cut(s)	119
BstAFI	CTTAAG	2 cut(s)	1256, 2129
BstAPI	GCANNNNNTGC	3 cut(s)	156, 280, 289
BstAUI	TGTACA	1 cut(s)	2304
BstBI	TTCGAA	4 cut(s)	256, 590, 632, 764
BstC8I	GCNNGC	9 cut(s)	90, 132, 148, 1370, 1859, 2166, 2366, 2502, 2673
BstDSI	CCRYGG	2 cut(s)	93, 452
BstEII	GGTNACC	2 cut(s)	199, 1016
BstENI	CCTNNNNNAGG	1 cut(s)	1347
BstF5I	GGATG	9 cut(s)	102, 934, 1050, 1466, 1674, 1945, 2071, 2289, 2629
BstHHI	GCGC	2 cut(s)	61, 2519
BstKTI	GATC	7 cut(s)	669, 976, 1057, 1585, 1701, 2337, 2446
BstMAI	GTCTC	7 cut(s)	181, 303, 326, 1002, 1189, 2118, 2219
BstMBI	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
BstNI	CCWGG	2 cut(s)	166, 1679
BstNSI	RCATGY	2 cut(s)	1098, 1975
BstPAI	GACNNNNGTC	1 cut(s)	2547
BstPI	GGTNACC	2 cut(s)	199, 1016
BstSCI	CCNGG	6 cut(s)	9, 164, 246, 534, 1384, 1677
BstSFI	CTRYAG	1 cut(s)	2220
BstSLI	GKGCMC	1 cut(s)	890
BstV1I	GCAGC	6 cut(s)	146, 585, 1051, 2282, 2526, 2662
BstV2I	GAAGAC	2 cut(s)	105, 2053
BstX2I	RGATCY	1 cut(s)	666
BstXI	CCANNNNNNTGG	3 cut(s)	1012, 2037, 2062
BstYI	RGATCY	1 cut(s)	666
Bsu15I	ATCGAT	1 cut(s)	2697
Bsu36I	CCTNAGG	1 cut(s)	2370
BsuI	GTATCC	1 cut(s)	2728
BsuTUI	ATCGAT	1 cut(s)	2697
BtgI	CCRYGG	2 cut(s)	93, 452
BtrI	CACGTC	2 cut(s)	267, 793
BtsCI	GGATG	9 cut(s)	102, 934, 1050, 1466, 1674, 1945, 2071, 2289, 2629
BtsI	GCAGTG	2 cut(s)	1824, 2591
BtsIMutI	CAGTG	5 cut(s)	50, 810, 1626, 1824, 2591
BveI	ACCTGC	2 cut(s)	1136, 2097
Cac8I	GCNNGC	9 cut(s)	90, 132, 148, 1370, 1859, 2166, 2366, 2502, 2673
CaiI	CAGNNNCTG	1 cut(s)	280
CciI	TCATGA	1 cut(s)	964
CfoI	GCGC	2 cut(s)	61, 2519
Cfr10I	RCCGGY	6 cut(s)	130, 146, 203, 2339, 2504, 2760
Cfr13I	GGNCC	9 cut(s)	82, 168, 746, 886, 887, 1357, 1388, 1664, 1897
ClaI	ATCGAT	1 cut(s)	2697
Csp6I	GTAC	6 cut(s)	528, 1149, 1298, 2305, 2530, 2564
CspAI	ACCGGT	1 cut(s)	2339
CviQI	GTAC	6 cut(s)	528, 1149, 1298, 2305, 2530, 2564
DpnI	GATC	7 cut(s)	668, 975, 1056, 1584, 1700, 2336, 2445
DpnII	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
DraI	TTTAAA	1 cut(s)	726
DraIII	CACNNNGTG	3 cut(s)	56, 1915, 2389
EaeI	YGGCCR	2 cut(s)	132, 2100
Eam1104I	CTCTTC	3 cut(s)	415, 1817, 2710
EarI	CTCTTC	3 cut(s)	415, 1817, 2710
Eco130I	CCWWGG	2 cut(s)	93, 2061
Eco147I	AGGCCT	4 cut(s)	330, 482, 1857, 2539
Eco24I	GRGCYC	1 cut(s)	890
Eco31I	GGTCTC	1 cut(s)	2118
Eco47I	GGWCC	6 cut(s)	82, 746, 1357, 1388, 1664, 1897
Eco57I	CTGAAG	3 cut(s)	326, 401, 1529
Eco81I	CCTNAGG	1 cut(s)	2370
Eco88I	CYCGRG	2 cut(s)	316, 484
Eco91I	GGTNACC	2 cut(s)	199, 1016
EcoNI	CCTNNNNNAGG	1 cut(s)	1347
EcoO109I	RGGNCCY	3 cut(s)	746, 886, 887
EcoO65I	GGTNACC	2 cut(s)	199, 1016
EcoRII	CCWGG	2 cut(s)	164, 1677
EcoT14I	CCWWGG	2 cut(s)	93, 2061
EcoT38I	GRGCYC	1 cut(s)	890
ErhI	CCWWGG	2 cut(s)	93, 2061
FaqI	GGGAC	4 cut(s)	1234, 1635, 1932, 1996
FauI	CCCGC	4 cut(s)	379, 599, 2157, 2723
FbaI	TGATCA	3 cut(s)	1582, 1698, 2334
FblI	GTMKAC	1 cut(s)	1993
Fnu4HI	GCNGC	7 cut(s)	160, 599, 1065, 1976, 2271, 2515, 2676
FokI	GGATG	9 cut(s)	89, 941, 1057, 1473, 1661, 1952, 2078, 2296, 2636
FriOI	GRGCYC	1 cut(s)	890
Fsp4HI	GCNGC	7 cut(s)	160, 599, 1065, 1976, 2271, 2515, 2676
FspBI	CTAG	8 cut(s)	851, 1365, 1374, 1481, 2043, 2234, 2387, 2478
GlaI	GCGC	2 cut(s)	60, 2518
GluI	GCNGC	7 cut(s)	160, 599, 1065, 1976, 2271, 2515, 2676
GsaI	CCCAGC	1 cut(s)	2730
GsuI	CTGGAG	3 cut(s)	2045, 2187, 2244
HhaI	GCGC	2 cut(s)	61, 2519
Hin1I	GRCGYC	1 cut(s)	119
Hin6I	GCGC	2 cut(s)	59, 2517
HinP1I	GCGC	2 cut(s)	59, 2517
HincII	GTYRAC	1 cut(s)	1185
HindII	GTYRAC	1 cut(s)	1185
HindIII	AAGCTT	1 cut(s)	112
HphI	GGTGA	7 cut(s)	295, 401, 847, 1427, 1592, 2329, 2375
Hpy166II	GTNNAC	5 cut(s)	352, 741, 1185, 1994, 2305
Hpy188I	TCNGA	8 cut(s)	231, 345, 438, 492, 1460, 1876, 1901, 2797
Hpy8I	GTNNAC	5 cut(s)	352, 741, 1185, 1994, 2305
Hpy99I	CGWCG	1 cut(s)	271
HpyAV	CCTTC	9 cut(s)	136, 340, 425, 454, 624, 834, 2012, 2145, 2775
HpyCH4III	ACNGT	5 cut(s)	54, 368, 1780, 2096, 2491
HpyCH4IV	ACGT	5 cut(s)	119, 266, 782, 792, 1028
HpySE526I	ACGT	5 cut(s)	119, 266, 782, 792, 1028
Hsp92I	GRCGYC	1 cut(s)	119
HspAI	GCGC	2 cut(s)	59, 2517
Kpn2I	TCCGGA	2 cut(s)	463, 1835
KroI	GCCGGC	2 cut(s)	130, 146
KroNI	GCCGGC	2 cut(s)	132, 148
Ksp22I	TGATCA	3 cut(s)	1582, 1698, 2334
Kzo9I	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
LmnI	GCTCC	7 cut(s)	512, 1234, 1405, 2026, 2206, 2263, 2524
Lsp1109I	GCAGC	6 cut(s)	146, 585, 1051, 2282, 2526, 2662
LweI	GCATC	2 cut(s)	2413, 2614
MaeI	CTAG	8 cut(s)	851, 1365, 1374, 1481, 2043, 2234, 2387, 2478
MaeII	ACGT	5 cut(s)	119, 266, 782, 792, 1028
MalI	GATC	7 cut(s)	668, 975, 1056, 1584, 1700, 2336, 2445
MboI	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
MfeI	CAATTG	1 cut(s)	2352
MflI	RGATCY	1 cut(s)	666
MhlI	GDGCHC	2 cut(s)	890, 1971
MlsI	TGGCCA	1 cut(s)	2102
MluNI	TGGCCA	1 cut(s)	2102
MlyI	GAGTC	9 cut(s)	183, 286, 328, 496, 1191, 1646, 1978, 2696, 2789
MmeI	TCCRAC	6 cut(s)	633, 900, 1438, 1450, 1924, 2471
Mox20I	TGGCCA	1 cut(s)	2102
MroI	TCCGGA	2 cut(s)	463, 1835
MroNI	GCCGGC	2 cut(s)	130, 146
MroXI	GAANNNNTTC	3 cut(s)	368, 443, 737
MscI	TGGCCA	1 cut(s)	2102
MseI	TTAA	9 cut(s)	224, 546, 725, 779, 1257, 1619, 2130, 2324, 2415
MslI	CAYNNNNRTG	4 cut(s)	557, 726, 1578, 2035
Msp20I	TGGCCA	1 cut(s)	2102
MspA1I	CMGCKG	1 cut(s)	2730
MspCI	CTTAAG	2 cut(s)	1256, 2129
MspR9I	CCNGG	6 cut(s)	11, 166, 248, 536, 1386, 1679
MunI	CAATTG	1 cut(s)	2352
MvaI	CCWGG	2 cut(s)	166, 1679
NaeI	GCCGGC	2 cut(s)	132, 148
NciI	CCSGG	4 cut(s)	11, 248, 536, 1386
NcoI	CCATGG	1 cut(s)	93
NdeII	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
NgoMIV	GCCGGC	2 cut(s)	130, 146
NmeAIII	GCCGAG	1 cut(s)	588
NmuCI	GTSAC	6 cut(s)	69, 1415, 1726, 1907, 2381, 2389
NspI	RCATGY	2 cut(s)	1098, 1975
NspV	TTCGAA	4 cut(s)	256, 590, 632, 764
PaeR7I	CTCGAG	1 cut(s)	484
PagI	TCATGA	1 cut(s)	964
PceI	AGGCCT	4 cut(s)	330, 482, 1857, 2539
PciI	ACATGT	1 cut(s)	1094
PcsI	WCGNNNNNNNCGW	1 cut(s)	491
PdiI	GCCGGC	2 cut(s)	132, 148
PdmI	GAANNNNTTC	3 cut(s)	368, 443, 737
PfeI	GAWTC	6 cut(s)	439, 460, 587, 838, 1119, 1832
PflFI	GACNNNGTC	1 cut(s)	1905
PflMI	CCANNNNNTGG	1 cut(s)	1661
PfoI	TCCNGGA	1 cut(s)	534
PinAI	ACCGGT	1 cut(s)	2339
PkrI	GCNGC	7 cut(s)	161, 600, 1066, 1977, 2272, 2516, 2677
PleI	GAGTC	9 cut(s)	182, 285, 327, 495, 1191, 1645, 1978, 2696, 2788
PpsI	GAGTC	9 cut(s)	182, 285, 327, 495, 1191, 1645, 1978, 2696, 2788
PpuMI	RGGWCCY	1 cut(s)	746
PscI	ACATGT	1 cut(s)	1094
PshAI	GACNNNNGTC	1 cut(s)	2547
PshBI	ATTAAT	1 cut(s)	2324
Psp1406I	AACGTT	1 cut(s)	782
Psp5II	RGGWCCY	1 cut(s)	746
Psp6I	CCWGG	2 cut(s)	164, 1677
PspEI	GGTNACC	2 cut(s)	199, 1016
PspFI	CCCAGC	1 cut(s)	2726
PspGI	CCWGG	2 cut(s)	164, 1677
PspOMI	GGGCCC	1 cut(s)	886
PspPI	GGNCC	9 cut(s)	82, 168, 746, 886, 887, 1357, 1388, 1664, 1897
PspPPI	RGGWCCY	1 cut(s)	746
PspXI	VCTCGAGB	1 cut(s)	484
PstNI	CAGNNNCTG	1 cut(s)	280
PsuI	RGATCY	1 cut(s)	666
PsyI	GACNNNGTC	1 cut(s)	1905
RsaI	GTAC	6 cut(s)	529, 1150, 1299, 2306, 2531, 2565
RsaNI	GTAC	6 cut(s)	528, 1149, 1298, 2305, 2530, 2564
RseI	CAYNNNNRTG	4 cut(s)	557, 726, 1578, 2035
SaqAI	TTAA	9 cut(s)	224, 546, 725, 779, 1257, 1619, 2130, 2324, 2415
SatI	GCNGC	7 cut(s)	160, 599, 1065, 1976, 2271, 2515, 2676
Sau3AI	GATC	7 cut(s)	666, 973, 1054, 1582, 1698, 2334, 2443
Sau96I	GGNCC	9 cut(s)	82, 168, 746, 886, 887, 1357, 1388, 1664, 1897
SchI	GAGTC	9 cut(s)	183, 286, 328, 496, 1191, 1646, 1978, 2696, 2789
ScrFI	CCNGG	6 cut(s)	11, 166, 248, 536, 1386, 1679
SduI	GDGCHC	2 cut(s)	890, 1971
SfaNI	GCATC	2 cut(s)	2413, 2614
SfcI	CTRYAG	1 cut(s)	2220
Sfr274I	CTCGAG	1 cut(s)	484
SfuI	TTCGAA	4 cut(s)	256, 590, 632, 764
SinI	GGWCC	6 cut(s)	82, 746, 1357, 1388, 1664, 1897
SlaI	CTCGAG	1 cut(s)	484
SmiI	ATTTAAAT	1 cut(s)	726
SmiMI	CAYNNNNRTG	4 cut(s)	557, 726, 1578, 2035
SmlI	CTYRAG	5 cut(s)	484, 865, 1256, 2129, 2291
SmoI	CTYRAG	5 cut(s)	484, 865, 1256, 2129, 2291
SseBI	AGGCCT	4 cut(s)	330, 482, 1857, 2539
SsiI	CCGC	7 cut(s)	251, 292, 386, 606, 1976, 2164, 2730
SspI	AATATT	2 cut(s)	2322, 2721
SspMI	CTAG	8 cut(s)	851, 1365, 1374, 1481, 2043, 2234, 2387, 2478
StuI	AGGCCT	4 cut(s)	330, 482, 1857, 2539
StyD4I	CCNGG	6 cut(s)	9, 164, 246, 534, 1384, 1677
StyI	CCWWGG	2 cut(s)	93, 2061
SwaI	ATTTAAAT	1 cut(s)	726
TaaI	ACNGT	5 cut(s)	54, 368, 1780, 2096, 2491
TaiI	ACGT	5 cut(s)	122, 269, 785, 795, 1031
TaqI	TCGA	9 cut(s)	256, 485, 590, 617, 632, 764, 998, 1309, 2697
TaqII	GACCGA	3 cut(s)	422, 719, 950
TatI	WGTACW	2 cut(s)	2304, 2563
TauI	GCSGC	1 cut(s)	1978
TfiI	GAWTC	6 cut(s)	439, 460, 587, 838, 1119, 1832
Tru1I	TTAA	9 cut(s)	224, 546, 725, 779, 1257, 1619, 2130, 2324, 2415
Tru9I	TTAA	9 cut(s)	224, 546, 725, 779, 1257, 1619, 2130, 2324, 2415
TscAI	CASTG	5 cut(s)	57, 817, 1633, 1824, 2591
TseFI	GTSAC	6 cut(s)	69, 1415, 1726, 1907, 2381, 2389
TseI	GCWGC	6 cut(s)	159, 598, 1064, 2270, 2514, 2675
Tsp45I	GTSAC	6 cut(s)	69, 1415, 1726, 1907, 2381, 2389
TspGWI	ACGGA	2 cut(s)	17, 2296
TspRI	CASTG	5 cut(s)	57, 817, 1633, 1824, 2591
Tth111I	GACNNNGTC	1 cut(s)	1905
Van91I	CCANNNNNTGG	1 cut(s)	1661
Vha464I	CTTAAG	2 cut(s)	1256, 2129
VpaK11BI	GGWCC	6 cut(s)	82, 746, 1357, 1388, 1664, 1897
VspI	ATTAAT	1 cut(s)	2324
XagI	CCTNNNNNAGG	1 cut(s)	1347
XapI	RAATTY	3 cut(s)	1549, 1599, 2109
XceI	RCATGY	2 cut(s)	1098, 1975
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1685
XhoI	CTCGAG	1 cut(s)	484
XmiI	GTMKAC	1 cut(s)	1993
XmnI	GAANNNNTTC	3 cut(s)	368, 443, 737
XspI	CTAG	8 cut(s)	851, 1365, 1374, 1481, 2043, 2234, 2387, 2478
ZraI	GACGTC	1 cut(s)	120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.