Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0003113

Physical Location & Seq

Genomic Coordinates Forward (+)

954171 .. 957547

Gene Structure 3377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g01480.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGAAGGACCCCCATCTGGGTTTCTGGGGTTGTTTCCCGGGTGTGCTGCTTTTGTTCTTTTCGCTCTACTCACCATCAGCACACTCCCAGTCCGCCGGCGGCGACGACGGAGCGGCCATGGAAGCAATCAGCAAAAGCATCGGCCCCAACAGTCTCGGGTGGTCCGGCACCGATTACTGCAACTGGGGACAAGTCAGTTGCACCAAGGACGGCAAGGTTTTCAAAATCCAATTGGGTAATCAGAAACTCACCGGCACGCTTCCGCCGGAAATTCAAAAGCTTTCAAATTTGCAGCAACTCGAGGTTCAGAACAACCAACTCACGGGACCTTTTCCGAGCCTCTCCGGGCTGCAACCGCTTCAGGTCCTCCTCGCCCACGACAACAACTTCTCGTCCTTCCCTTCCGATTTCTTCACCGGACTCACCTCTCTTGACAGCATCAACATCGACCACAACCCCTTCGCGGCGTGGCAGATTCCGGACACTCTCAAAGACGCCACAGCGCTGAGGGAATTCTCCGCAACCGAGACCAACATCACCGGAAGAATCCCCGATATCTTCACCAGTTCCAATTTCCCAGGTTTGACTGAACTGCATTTGGCTTTCAATTACCTTGAAGGCGAATTGCCTGCTAGTTTTTCGAGTTCGAGTATTCAGTCCCTCTGGTTGAACGGTCAACAGGGCACCAATAGGCTTAATGGTACTATTGATGTGTTACAGAACATGACTTCTCTGCGTGAAGTTTGGTTACATGGTAATTTTTTCACCGGTCCAATACCGGACTTGTTGAAATTAGGTAGCTTGACCACTTTGAGTTTGAGGGATAACAAGCTCACCGGCGTTGTTCCGGCGTCTTTGTTGAATCTTAAATCCCTTACTTCTGTTAATTTGACCAACAATATGCTTCAAGGACCAATGCCCAAGTTTGGCGATGGGATTCAGGTGGATATGACATCGCAAAATAGTTTTTGCAGTGATAAGCCGGGTGTTGATTGCGACGCTCGTGTCAATATTTTGCTTTCGGTCGTCAAAGACATGGGTTATCCTACTGTTTTTGCAGAGAGTTGGAAAGGGAATGATCCTTGTAATAACTGGAAGGGAATTGTGTGTCATGGAGGAAACATTACCGTTGTCATCTTTCGGAGCCTGGGTCTGAGGGGTACGATCTCTACAAATTATTCTCTGATTACCTTCTTGCAAACATTGAGACTTGACAATAATAATCTCACGGGTACTATACCACAGGAACTTACGCAACTGCCCAACCTTCAAGAGATAGATGTTAGTAACAATCAACTTGATGGTCAAGTACCCAAGTTTAATGATACTGTGCAAGTGAAAACAGGTGGGAACCCTCGTATTGTTAAGGATGGTCCCCCTTCGCCTGCGACACCTCCTAATTCACCGCCTGGCTCGCACTCAGGTGGAGGTAAAAAATCTAGGACTGGGGTGGTTGTTGGGGCTGTCATCGGCAGTGTTGGCGGATTGGTTGTAGTTGGGTTTGTTGCTTTTTGTCTACTTAAGAGAAAGCATTCTGGCAGAGTGCAAAGTCCAAACGCACTGGTTATTCGTCCTCGTCATTCTGGAGATCAAAATGCAGTCAAGATCGCGGTTGCTAGCTCTGGTGTTAATCGCGGTGGAAATGAGTCCTATAAGAGTCCGGCAAGTAGTGGACCTAATGACATTCATGTGGTTGAGGCGGGAAGTATGGTCATTTCAATCCAAGTTTTGAGAAATGTGACCAATAATTTCAGTGAAAATAATGTATTAGGAAAAGGTGGTTTCGGAACTGTGTACAAAGGGGAGTTGCATGATGGGACAAAGATTGCAGTGAAGAGGATGGAATCTGGAGTGGTGGCGGAGAAGGGTCTAAATGAGTTCAAGTCTGAGATTGCAGTTCTTACTAAGGTCCGACACCGCCACTTGGTTGGACTTCTTGGCTATTGTTTGGAAGGAAACGAGAGGCTTCTTGTTTATGAATACATGCCTCAAGGGACTCTTAGTAGATACTTGTTCAACTGGATAGAGGAAGGTCTGAAGCCACTTGAATGGACTAGAAGGCTGACCATTGCCTTGGATGTTGCAAGAGGGGTTGAGTATCTCCACGGTTTAGCCAACCAGACTTTCATTCACAGGGATCTTAAACCTTCGAACATTTTACTCGGAGATGATATGCGGGCTAAAGTTTCAGACTTTGGACTGGTTCGTCTTGCTCCAGAAGGGAAAGCCTCAATTGAGACGAGACTAGCCGGAACTTTTGGCTATTTGGCTCCAGAGTATGCAGCAACTGGGCGTATGACACTCAAGGTTGACGTGTATAGCTTTGGAGTGATCTTGATGGAGTTGATCACGGGTAGAAAAGCAATTGATGAAAGCCAACCAGAGGAGAGGTTGCACCTTGTTACATGGTTCCGTAGAATGCTCATTAACAAGGATGCACTCCGGAATGTCATTGATCCAACCATTGATCTCAATGAGGAAACTCTTTCTAGTATTAGCACTGTCGCTGAGCTTGCTGGGCATTGCAGCGCAAGGGAGCCCTACCAGAGGCCTGACATGGGTCATGCAGTCAATGTGCTTTCGTCGCTCGTTGAGCAATGGAAACCATCTGAACTCGAAGATTCTGATGATATGCATGGAATTGACCTCGAAATGACCTTACCACAAGCACTGAAGAAGTGGCGGGCTTTTGAGGGCAATAGCAACCTTGACGATTCTTCGTCGTCTTCATCATTGTTTCCCAGCGGGGATAACACCCAAACCAGCATACCTACTCGGCCACCTGGATTTGCAGAATCGTTTACATCATCGGATGGGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

941

Amino Acids

102.15

Weight (kDa)

6.03

Isoelectric Point (pI)

35.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01820
fragaria_vesca	FvH4_4g33170 FvH4_4g33170 FvH4_4g33171
malus_domestica	MD13G1017200.v1.1 MD16G1015000.v1.1 MD16G1015200.v1.1
prunus_persica	Prupe.1G336300_v2.0.a1 Prupe.1G336300_v2.0.a1
pyrus_communis	pycom13g01480 pycom16g01400
rosa_chinensis	RchiOBHm_Chr4g0442211 RchiOBHm_Chr4g0442221 RchiOBHm_Chr4g0442231
rosa_laevigata	RLG00000006022 RLG00000006023
rosa_multiflora	Rmu_co8222306.1_g000001 Rmu_sc0000124.1_g000060 Rmu_sc0000124.1_g000062 Rmu_sc0010284.1_g000002 Rmu_sc0010284.1_g000003
rosa_roxburghii	Rroxscaffold_5G00383140 Rroxscaffold_5G00383150
rosa_rugosa	Rorug04G0339700 Rorug04G0339800 Rorug04G0339900
rosa_samantha	Rh4AG391300 Rh4AG391400 Rh4BG405000 Rh4BG405100 Rh4CG420100 Rh4CG420200 Rh4DG398100 Rh4DG398200 Rh4DG398300
rosa_wichuraiana	Rw4G033820 Rw4G033830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1004, 2205
AccB1I	GGYRCC	2 cut(s)	167, 683
AccBSI	CCGCTC	1 cut(s)	113
AccI	GTMKAC	1 cut(s)	1516
AccII	CGCG	3 cut(s)	464, 1610, 1635
AccIII	TCCGGA	2 cut(s)	478, 2442
AclWI	GGATC	3 cut(s)	1073, 2145, 2450
AcoI	YGGCCR	2 cut(s)	114, 2777
AcsI	RAATTY	3 cut(s)	270, 286, 512
AcuI	CTGAAG	3 cut(s)	344, 2057, 2693
AcyI	GRCGYC	2 cut(s)	495, 851
AfaI	GTAC	5 cut(s)	703, 1162, 1234, 1311, 1796
AfeI	AGCGCT	1 cut(s)	504
AfiI	CCNNNNNNNGG	9 cut(s)	16, 17, 322, 463, 926, 1924, 2383, 2547, 2558
AflII	CTTAAG	1 cut(s)	1520
AflIII	ACRYGT	1 cut(s)	2313
AgeI	ACCGGT	1 cut(s)	767
AjiI	CACGTC	1 cut(s)	2314
AjnI	CCWGG	4 cut(s)	577, 1146, 1408, 2782
AjuI	GAANNNNNNNTTGG	2 cut(s)	2108, 2140
AleI	CACNNNNGTG	1 cut(s)	1422
AluBI	AGCT	6 cut(s)	280, 801, 832, 1620, 2322, 2512
AluI	AGCT	6 cut(s)	280, 801, 832, 1620, 2322, 2512
Alw26I	GTCTC	5 cut(s)	158, 521, 1201, 2231, 2236
AlwI	GGATC	3 cut(s)	1073, 2145, 2450
AlwNI	CAGNNNCTG	1 cut(s)	2288
Ama87I	CYCGRG	3 cut(s)	37, 155, 299
Aor13HI	TCCGGA	2 cut(s)	478, 2442
Aor51HI	AGCGCT	1 cut(s)	504
AoxI	GGCC	4 cut(s)	114, 142, 2549, 2777
ApeKI	GCWGC	5 cut(s)	46, 292, 349, 2282, 2526
ApoI	RAATTY	3 cut(s)	270, 286, 512
AsiGI	ACCGGT	1 cut(s)	767
Asp700I	GAANNNNTTC	1 cut(s)	1531
AspLEI	GCGC	2 cut(s)	505, 2531
AsuC2I	CCSGG	4 cut(s)	38, 39, 346, 984
AsuHPI	GGTGA	9 cut(s)	63, 241, 406, 415, 529, 553, 757, 826, 1395
AsuII	TTCGAA	1 cut(s)	2150
AsuNHI	GCTAGC	1 cut(s)	1616
AvaI	CYCGRG	3 cut(s)	37, 155, 299
AvaII	GGWCC	9 cut(s)	7, 162, 326, 364, 770, 911, 1373, 1673, 1909
BaeGI	GKGCMC	1 cut(s)	686
BanI	GGYRCC	2 cut(s)	167, 683
BanII	GRGCYC	1 cut(s)	2541
BarI	GAAGNNNNNNTAC	2 cut(s)	732, 764
BauI	CACGAG	1 cut(s)	1002
BbsI	GAAGAC	1 cut(s)	2718
BbvCI	CCTCAGC	1 cut(s)	506
BbvI	GCAGC	5 cut(s)	33, 304, 336, 2294, 2538
BceAI	ACGGC	1 cut(s)	226
BcgI	CGANNNNNNTGC	6 cut(s)	121, 155, 427, 461, 611, 645
BciT130I	CCWGG	4 cut(s)	579, 1148, 1410, 2784
BclI	TGATCA	1 cut(s)	2346
BcnI	CCSGG	4 cut(s)	38, 39, 346, 984
BcoDI	GTCTC	5 cut(s)	158, 521, 1201, 2231, 2236
BfaI	CTAG	6 cut(s)	633, 1440, 1617, 2055, 2246, 2490
BfoI	RGCGCY	1 cut(s)	506
BfrI	CTTAAG	1 cut(s)	1520
BisI	GCNGC	8 cut(s)	47, 100, 114, 293, 350, 465, 2283, 2527
BlpI	GCTNAGC	1 cut(s)	2508
BlsI	GCNGC	8 cut(s)	48, 101, 115, 294, 351, 466, 2284, 2528
Bme1390I	CCNGG	8 cut(s)	38, 39, 346, 579, 984, 1148, 1410, 2784
Bme18I	GGWCC	9 cut(s)	7, 162, 326, 364, 770, 911, 1373, 1673, 1909
BmeT110I	CYCGRG	3 cut(s)	37, 155, 299
BmgBI	CACGTC	1 cut(s)	2314
BmrFI	CCNGG	8 cut(s)	38, 39, 346, 579, 984, 1148, 1410, 2784
BmrI	ACTGGG	4 cut(s)	82, 193, 1455, 2298
BmsI	GCATC	3 cut(s)	147, 447, 2425
BmtI	GCTAGC	1 cut(s)	1620
BmuI	ACTGGG	4 cut(s)	82, 193, 1455, 2298
BoxI	GACNNNNGTC	1 cut(s)	2559
BpiI	GAAGAC	1 cut(s)	2718
BpmI	CTGGAG	4 cut(s)	1605, 1869, 2199, 2256
Bpu10I	CCTNAGC	1 cut(s)	506
Bpu1102I	GCTNAGC	1 cut(s)	2508
Bpu14I	TTCGAA	1 cut(s)	2150
BpuEI	CTTGAG	2 cut(s)	1974, 2288
BpuMI	CCSGG	4 cut(s)	38, 39, 346, 984
BsaHI	GRCGYC	2 cut(s)	495, 851
BsaI	GGTCTC	1 cut(s)	521
BsaJI	CCNNGG	7 cut(s)	37, 117, 204, 577, 1147, 2073, 2104
BsaWI	WCCGGW	6 cut(s)	416, 478, 539, 767, 778, 2442
BsaXI	ACNNNNNCTCC	2 cut(s)	1135, 1165
Bsc4I	CCNNNNNNNGG	9 cut(s)	16, 17, 322, 463, 926, 1924, 2383, 2547, 2558
Bse118I	RCCGGY	4 cut(s)	95, 251, 767, 836
Bse1I	ACTGG	9 cut(s)	88, 188, 564, 1097, 1450, 1566, 2024, 2205, 2293
Bse3DI	GCAATG	3 cut(s)	2067, 2521, 2603
BseAI	TCCGGA	2 cut(s)	478, 2442
BseBI	CCWGG	4 cut(s)	579, 1148, 1410, 2784
BseDI	CCNNGG	7 cut(s)	37, 117, 204, 577, 1147, 2073, 2104
BseGI	GGATG	5 cut(s)	1375, 1845, 2083, 2440, 2818
BseLI	CCNNNNNNNGG	9 cut(s)	16, 17, 322, 463, 926, 1924, 2383, 2547, 2558
BseMI	GCAATG	3 cut(s)	2067, 2521, 2603
BseMII	CTCAG	5 cut(s)	497, 1145, 1434, 1878, 2499
BseNI	ACTGG	9 cut(s)	88, 188, 564, 1097, 1450, 1566, 2024, 2205, 2293
BseRI	GAGGAG	2 cut(s)	359, 2399
BseSI	GKGCMC	1 cut(s)	686
BseXI	GCAGC	5 cut(s)	33, 304, 336, 2294, 2538
BseYI	CCCAGC	2 cut(s)	2516, 2741
Bsh1236I	CGCG	3 cut(s)	464, 1610, 1635
Bsh1285I	CGRYCG	1 cut(s)	1026
BshFI	GGCC	4 cut(s)	116, 144, 2551, 2779
BshNI	GGYRCC	2 cut(s)	167, 683
BshTI	ACCGGT	1 cut(s)	767
BsiEI	CGRYCG	1 cut(s)	1026
BsiHKCI	CYCGRG	3 cut(s)	37, 155, 299
BslFI	GGGAC	6 cut(s)	201, 339, 643, 1359, 1831, 2008
BslI	CCNNNNNNNGG	9 cut(s)	16, 17, 322, 463, 926, 1924, 2383, 2547, 2558
BsmAI	GTCTC	5 cut(s)	158, 521, 1201, 2231, 2236
BsmBI	CGTCTC	1 cut(s)	2231
BsmFI	GGGAC	6 cut(s)	201, 339, 643, 1359, 1831, 2008
BsmI	GAATGC	2 cut(s)	1531, 2424
BsnI	GGCC	4 cut(s)	116, 144, 2551, 2779
Bso31I	GGTCTC	1 cut(s)	521
BsoBI	CYCGRG	3 cut(s)	37, 155, 299
Bsp119I	TTCGAA	1 cut(s)	2150
Bsp1286I	GDGCHC	2 cut(s)	686, 2541
Bsp13I	TCCGGA	2 cut(s)	478, 2442
Bsp1407I	TGTACA	1 cut(s)	1794
Bsp143I	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
Bsp1720I	GCTNAGC	1 cut(s)	2508
Bsp19I	CCATGG	1 cut(s)	117
BspANI	GGCC	4 cut(s)	116, 144, 2551, 2779
BspCNI	CTCAG	5 cut(s)	498, 1146, 1433, 1879, 2500
BspEI	TCCGGA	2 cut(s)	478, 2442
BspFNI	CGCG	3 cut(s)	464, 1610, 1635
BspOI	GCTAGC	1 cut(s)	1620
BspPI	GGATC	3 cut(s)	1073, 2145, 2450
BspT104I	TTCGAA	1 cut(s)	2150
BspT107I	GGYRCC	2 cut(s)	167, 683
BspTI	CTTAAG	1 cut(s)	1520
BspTNI	GGTCTC	1 cut(s)	521
BsrBI	CCGCTC	1 cut(s)	113
BsrDI	GCAATG	3 cut(s)	2067, 2521, 2603
BsrFI	RCCGGY	4 cut(s)	95, 251, 767, 836
BsrGI	TGTACA	1 cut(s)	1794
BsrI	ACTGG	9 cut(s)	88, 188, 564, 1097, 1450, 1566, 2024, 2205, 2293
BssAI	RCCGGY	4 cut(s)	95, 251, 767, 836
BssECI	CCNNGG	7 cut(s)	37, 117, 204, 577, 1147, 2073, 2104
BssMI	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
BssNI	GRCGYC	2 cut(s)	495, 851
BssSI	CACGAG	1 cut(s)	1002
BssT1I	CCWWGG	3 cut(s)	117, 204, 2073
Bst2BI	CACGAG	1 cut(s)	1002
Bst2UI	CCWGG	4 cut(s)	579, 1148, 1410, 2784
Bst4CI	ACNGT	8 cut(s)	152, 674, 1051, 1129, 1330, 1792, 2108, 2503
Bst6I	CTCTTC	1 cut(s)	1829
BstACI	GRCGYC	2 cut(s)	495, 851
BstAFI	CTTAAG	1 cut(s)	1520
BstAUI	TGTACA	1 cut(s)	1794
BstBI	TTCGAA	1 cut(s)	2150
BstC8I	GCNNGC	9 cut(s)	97, 257, 630, 1386, 1415, 1618, 2178, 2514, 2685
BstDEI	CTNAG	7 cut(s)	506, 1154, 1420, 1887, 1905, 2000, 2508
BstDSI	CCRYGG	2 cut(s)	117, 2104
BstENI	CCTNNNNNAGG	1 cut(s)	2545
BstF5I	GGATG	5 cut(s)	1375, 1845, 2083, 2440, 2818
BstFNI	CGCG	3 cut(s)	464, 1610, 1635
BstH2I	RGCGCY	1 cut(s)	506
BstHHI	GCGC	2 cut(s)	505, 2531
BstKTI	GATC	9 cut(s)	1081, 1167, 1591, 1608, 2140, 2334, 2349, 2458, 2470
BstMAI	GTCTC	5 cut(s)	158, 521, 1201, 2231, 2236
BstMBI	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
BstMCI	CGRYCG	1 cut(s)	1026
BstMWI	GCNNNNNNNGC	8 cut(s)	122, 355, 1414, 1479, 2513, 2518, 2584, 2593
BstNI	CCWGG	4 cut(s)	579, 1148, 1410, 2784
BstNSI	RCATGY	1 cut(s)	1987
BstPAI	GACNNNNGTC	1 cut(s)	2559
BstSCI	CCNGG	8 cut(s)	36, 37, 344, 577, 982, 1146, 1408, 2782
BstSLI	GKGCMC	1 cut(s)	686
BstUI	CGCG	3 cut(s)	464, 1610, 1635
BstV1I	GCAGC	5 cut(s)	33, 304, 336, 2294, 2538
BstV2I	GAAGAC	1 cut(s)	2718
BstX2I	RGATCY	1 cut(s)	2137
BstXI	CCANNNNNNTGG	3 cut(s)	1928, 2049, 2074
BstYI	RGATCY	1 cut(s)	2137
BsuRI	GGCC	4 cut(s)	116, 144, 2551, 2779
BtgI	CCRYGG	2 cut(s)	117, 2104
BtgZI	GCGATG	2 cut(s)	939, 945
BtrI	CACGTC	1 cut(s)	2314
BtsCI	GGATG	5 cut(s)	1375, 1845, 2083, 2440, 2818
BtsI	GCAGTG	3 cut(s)	979, 1480, 1836
BtsIMutI	CAGTG	7 cut(s)	979, 1480, 1559, 1759, 1836, 2499, 2669
Cac8I	GCNNGC	9 cut(s)	97, 257, 630, 1386, 1415, 1618, 2178, 2514, 2685
CaiI	CAGNNNCTG	1 cut(s)	2288
CfoI	GCGC	2 cut(s)	505, 2531
Cfr10I	RCCGGY	4 cut(s)	95, 251, 767, 836
Cfr9I	CCCGGG	1 cut(s)	37
CseI	GACGC	3 cut(s)	503, 840, 1007
Csp6I	GTAC	5 cut(s)	702, 1161, 1233, 1310, 1795
CspAI	ACCGGT	1 cut(s)	767
CviQI	GTAC	5 cut(s)	702, 1161, 1233, 1310, 1795
DdeI	CTNAG	7 cut(s)	506, 1154, 1420, 1887, 1905, 2000, 2508
DpnI	GATC	9 cut(s)	1080, 1166, 1590, 1607, 2139, 2333, 2348, 2457, 2469
DpnII	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
DrdI	GACNNNNNNGTC	2 cut(s)	1004, 2205
DseDI	GACNNNNNNGTC	2 cut(s)	1004, 2205
EaeI	YGGCCR	2 cut(s)	114, 2777
Eam1104I	CTCTTC	1 cut(s)	1829
EarI	CTCTTC	1 cut(s)	1829
EciI	GGCGGA	4 cut(s)	82, 252, 1497, 1874
Eco130I	CCWWGG	3 cut(s)	117, 204, 2073
Eco147I	AGGCCT	1 cut(s)	2551
Eco24I	GRGCYC	1 cut(s)	2541
Eco31I	GGTCTC	1 cut(s)	521
Eco32I	GATATC	1 cut(s)	556
Eco47I	GGWCC	9 cut(s)	7, 162, 326, 364, 770, 911, 1373, 1673, 1909
Eco47III	AGCGCT	1 cut(s)	504
Eco57I	CTGAAG	3 cut(s)	344, 2057, 2693
Eco88I	CYCGRG	3 cut(s)	37, 155, 299
EcoNI	CCTNNNNNAGG	1 cut(s)	2545
EcoO109I	RGGNCCY	3 cut(s)	7, 326, 364
EcoRI	GAATTC	1 cut(s)	512
EcoRII	CCWGG	4 cut(s)	577, 1146, 1408, 2782
EcoRV	GATATC	1 cut(s)	556
EcoT14I	CCWWGG	3 cut(s)	117, 204, 2073
EcoT22I	ATGCAT	1 cut(s)	2637
EcoT38I	GRGCYC	1 cut(s)	2541
ErhI	CCWWGG	3 cut(s)	117, 204, 2073
Esp3I	CGTCTC	1 cut(s)	2231
FalI	AAGNNNNNCTT	2 cut(s)	1983, 2015
FaqI	GGGAC	6 cut(s)	201, 339, 643, 1359, 1831, 2008
FauI	CCCGC	4 cut(s)	1693, 2169, 2676, 2738
FbaI	TGATCA	1 cut(s)	2346
FblI	GTMKAC	1 cut(s)	1516
Fnu4HI	GCNGC	8 cut(s)	47, 100, 114, 293, 350, 465, 2283, 2527
FokI	GGATG	4 cut(s)	1382, 1852, 2090, 2447
FriOI	GRGCYC	1 cut(s)	2541
Fsp4HI	GCNGC	8 cut(s)	47, 100, 114, 293, 350, 465, 2283, 2527
FspBI	CTAG	6 cut(s)	633, 1440, 1617, 2055, 2246, 2490
GlaI	GCGC	2 cut(s)	504, 2530
GluI	GCNGC	8 cut(s)	47, 100, 114, 293, 350, 465, 2283, 2527
GsaI	CCCAGC	2 cut(s)	2520, 2745
GsuI	CTGGAG	4 cut(s)	1605, 1869, 2199, 2256
HaeII	RGCGCY	1 cut(s)	506
HaeIII	GGCC	4 cut(s)	116, 144, 2551, 2779
HgaI	GACGC	3 cut(s)	503, 840, 1007
HhaI	GCGC	2 cut(s)	505, 2531
Hin1I	GRCGYC	2 cut(s)	495, 851
Hin6I	GCGC	2 cut(s)	503, 2529
HinP1I	GCGC	2 cut(s)	503, 2529
HincII	GTYRAC	2 cut(s)	677, 2311
HindII	GTYRAC	2 cut(s)	677, 2311
HindIII	AAGCTT	1 cut(s)	278
HphI	GGTGA	9 cut(s)	63, 241, 406, 415, 529, 553, 757, 826, 1395
Hpy166II	GTNNAC	6 cut(s)	677, 1517, 1673, 1795, 2311, 2802
Hpy8I	GTNNAC	6 cut(s)	677, 1517, 1673, 1795, 2311, 2802
Hpy99I	CGWCG	5 cut(s)	107, 110, 1001, 2587, 2725
HpyCH4III	ACNGT	8 cut(s)	152, 674, 1051, 1129, 1330, 1792, 2108, 2503
HpyCH4IV	ACGT	1 cut(s)	2313
HpyF10VI	GCNNNNNNNGC	8 cut(s)	122, 355, 1414, 1479, 2513, 2518, 2584, 2593
HpyF3I	CTNAG	7 cut(s)	506, 1154, 1420, 1887, 1905, 2000, 2508
HpySE526I	ACGT	1 cut(s)	2313
Hsp92I	GRCGYC	2 cut(s)	495, 851
HspAI	GCGC	2 cut(s)	503, 2529
Kpn2I	TCCGGA	2 cut(s)	478, 2442
KroI	GCCGGC	1 cut(s)	95
KroNI	GCCGGC	1 cut(s)	97
Ksp22I	TGATCA	1 cut(s)	2346
Kzo9I	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
LmnI	GCTCC	5 cut(s)	110, 1143, 2218, 2275, 2536
Lsp1109I	GCAGC	5 cut(s)	33, 304, 336, 2294, 2538
LweI	GCATC	3 cut(s)	147, 447, 2425
MaeI	CTAG	6 cut(s)	633, 1440, 1617, 2055, 2246, 2490
MaeII	ACGT	1 cut(s)	2313
MaeIII	GTNAC	5 cut(s)	714, 747, 1286, 1738, 2401
MalI	GATC	9 cut(s)	1080, 1166, 1590, 1607, 2139, 2333, 2348, 2457, 2469
MbiI	CCGCTC	1 cut(s)	113
MboI	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
MboII	GAAGA	8 cut(s)	403, 550, 555, 1846, 2630, 2686, 2709, 2718
MfeI	CAATTG	3 cut(s)	230, 2232, 2364
MflI	RGATCY	1 cut(s)	2137
MhlI	GDGCHC	2 cut(s)	686, 2541
MlyI	GAGTC	4 cut(s)	414, 1655, 1666, 1990
MmeI	TCCRAC	4 cut(s)	1046, 1909, 1936, 2483
Mph1103I	ATGCAT	1 cut(s)	2637
MreI	CGCCGGCG	1 cut(s)	95
MroI	TCCGGA	2 cut(s)	478, 2442
MroNI	GCCGGC	1 cut(s)	95
MroXI	GAANNNNTTC	1 cut(s)	1531
MseI	TTAA	9 cut(s)	696, 867, 885, 1320, 1365, 1521, 1629, 2142, 2427
MslI	CAYNNNNRTG	3 cut(s)	1422, 1688, 2047
MspA1I	CMGCKG	1 cut(s)	2745
MspCI	CTTAAG	1 cut(s)	1520
MspR9I	CCNGG	8 cut(s)	38, 39, 346, 579, 984, 1148, 1410, 2784
MunI	CAATTG	3 cut(s)	230, 2232, 2364
Mva1269I	GAATGC	2 cut(s)	1531, 2424
MvaI	CCWGG	4 cut(s)	579, 1148, 1410, 2784
MvnI	CGCG	3 cut(s)	464, 1610, 1635
MwoI	GCNNNNNNNGC	8 cut(s)	122, 355, 1414, 1479, 2513, 2518, 2584, 2593
NaeI	GCCGGC	1 cut(s)	97
NciI	CCSGG	4 cut(s)	38, 39, 346, 984
NcoI	CCATGG	1 cut(s)	117
NdeII	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
NgoMIV	GCCGGC	1 cut(s)	95
NheI	GCTAGC	1 cut(s)	1616
NmeAIII	GCCGAG	1 cut(s)	2755
NmuCI	GTSAC	1 cut(s)	1738
NsiI	ATGCAT	1 cut(s)	2637
NspI	RCATGY	1 cut(s)	1987
NspV	TTCGAA	1 cut(s)	2150
OliI	CACNNNNGTG	1 cut(s)	1422
PaeR7I	CTCGAG	1 cut(s)	299
PceI	AGGCCT	1 cut(s)	2551
PctI	GAATGC	2 cut(s)	1531, 2424
PdiI	GCCGGC	1 cut(s)	97
PdmI	GAANNNNTTC	1 cut(s)	1531
PfeI	GAWTC	8 cut(s)	475, 546, 862, 937, 1844, 2621, 2714, 2795
PinAI	ACCGGT	1 cut(s)	767
PkrI	GCNGC	8 cut(s)	48, 101, 115, 294, 351, 466, 2284, 2528
PleI	GAGTC	4 cut(s)	414, 1654, 1665, 1990
PpsI	GAGTC	4 cut(s)	414, 1654, 1665, 1990
PpuMI	RGGWCCY	3 cut(s)	7, 326, 364
PshAI	GACNNNNGTC	1 cut(s)	2559
Psp5II	RGGWCCY	3 cut(s)	7, 326, 364
Psp6I	CCWGG	4 cut(s)	577, 1146, 1408, 2782
PspFI	CCCAGC	2 cut(s)	2516, 2741
PspGI	CCWGG	4 cut(s)	577, 1146, 1408, 2782
PspPPI	RGGWCCY	3 cut(s)	7, 326, 364
PspXI	VCTCGAGB	1 cut(s)	299
PstNI	CAGNNNCTG	1 cut(s)	2288
PsuI	RGATCY	1 cut(s)	2137
RsaI	GTAC	5 cut(s)	703, 1162, 1234, 1311, 1796
RsaNI	GTAC	5 cut(s)	702, 1161, 1233, 1310, 1795
RseI	CAYNNNNRTG	3 cut(s)	1422, 1688, 2047
SaqAI	TTAA	9 cut(s)	696, 867, 885, 1320, 1365, 1521, 1629, 2142, 2427
SatI	GCNGC	8 cut(s)	47, 100, 114, 293, 350, 465, 2283, 2527
Sau3AI	GATC	9 cut(s)	1078, 1164, 1588, 1605, 2137, 2331, 2346, 2455, 2467
SchI	GAGTC	4 cut(s)	414, 1655, 1666, 1990
ScrFI	CCNGG	8 cut(s)	38, 39, 346, 579, 984, 1148, 1410, 2784
SduI	GDGCHC	2 cut(s)	686, 2541
SfaNI	GCATC	3 cut(s)	147, 447, 2425
Sfr274I	CTCGAG	1 cut(s)	299
SfuI	TTCGAA	1 cut(s)	2150
SgrAI	CRCCGGYG	2 cut(s)	95, 836
SinI	GGWCC	9 cut(s)	7, 162, 326, 364, 770, 911, 1373, 1673, 1909
SlaI	CTCGAG	1 cut(s)	299
SmaI	CCCGGG	1 cut(s)	39
SmiMI	CAYNNNNRTG	3 cut(s)	1422, 1688, 2047
SmlI	CTYRAG	4 cut(s)	299, 1520, 1989, 2303
SmoI	CTYRAG	4 cut(s)	299, 1520, 1989, 2303
SseBI	AGGCCT	1 cut(s)	2551
SspI	AATATT	1 cut(s)	1012
SspMI	CTAG	6 cut(s)	633, 1440, 1617, 2055, 2246, 2490
StuI	AGGCCT	1 cut(s)	2551
StyD4I	CCNGG	8 cut(s)	36, 37, 344, 577, 982, 1146, 1408, 2782
StyI	CCWWGG	3 cut(s)	117, 204, 2073
TaaI	ACNGT	8 cut(s)	152, 674, 1051, 1129, 1330, 1792, 2108, 2503
TaiI	ACGT	1 cut(s)	2316
TaqI	TCGA	7 cut(s)	300, 447, 641, 647, 2150, 2616, 2649
TaqII	GACCGA	1 cut(s)	1012
TatI	WGTACW	1 cut(s)	1794
TauI	GCSGC	3 cut(s)	102, 116, 467
TfiI	GAWTC	8 cut(s)	475, 546, 862, 937, 1844, 2621, 2714, 2795
Tru1I	TTAA	9 cut(s)	696, 867, 885, 1320, 1365, 1521, 1629, 2142, 2427
Tru9I	TTAA	9 cut(s)	696, 867, 885, 1320, 1365, 1521, 1629, 2142, 2427
TscAI	CASTG	7 cut(s)	979, 1480, 1566, 1759, 1836, 2506, 2676
TseFI	GTSAC	1 cut(s)	1738
TseI	GCWGC	5 cut(s)	46, 292, 349, 2282, 2526
Tsp45I	GTSAC	1 cut(s)	1738
TspDTI	ATGAA	6 cut(s)	17, 1676, 1992, 2116, 2385, 2718
TspGWI	ACGGA	2 cut(s)	123, 2402
TspMI	CCCGGG	1 cut(s)	37
TspRI	CASTG	7 cut(s)	979, 1480, 1566, 1759, 1836, 2506, 2676
Vha464I	CTTAAG	1 cut(s)	1520
VpaK11BI	GGWCC	9 cut(s)	7, 162, 326, 364, 770, 911, 1373, 1673, 1909
XagI	CCTNNNNNAGG	1 cut(s)	2545
XapI	RAATTY	3 cut(s)	270, 286, 512
XceI	RCATGY	1 cut(s)	1987
XhoI	CTCGAG	1 cut(s)	299
XmaI	CCCGGG	1 cut(s)	37
XmiI	GTMKAC	1 cut(s)	1516
XmnI	GAANNNNTTC	1 cut(s)	1531
XspI	CTAG	6 cut(s)	633, 1440, 1617, 2055, 2246, 2490
Zsp2I	ATGCAT	1 cut(s)	2637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.