FvH4_5g05590

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010552
Physical Location & Seq
Forward (+)
3293689 .. 3296106
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05590.t1

Sequence Viewer

Length: 1383 bp
ATGCTCGCGAGGCGCCGTTGGATTTGTGCGGATCCGACTGCAGATTCTATTTATGAAGAACCAAAGCTTATAACGGAAAGAGGAATAATCAGAGTCGAACTCGATGATATCAAGCTCTTATCTCGAAGGAAGAAGTATACAAGGATGATGGTTAGGTTCCTTTCCGACATGGGTGTCCCTGAACTTGTGCAACTACCTATTATTGAACAAATATTTAAGAAGGTCGTTGATGTGGCCGTCCCCAAGCTGCATATTATGCATATGGTTGCCATTTTGGACATCACCTATGTGGACAGCGGCGGACTTTTTCCCGCAATTAAACCAGCAATTCGGCGTTTGGAGAGAGTGAGACTTGATAGTTTGGATGAAGCTACTATTACACGGACGCCTTCATGTGTTATTTGCTTGAAGGACCTGGATCTACAACATATGGTTATTCGACTACCTTGCTCGCACGTTTGTCATGTGGATTGCATTGTTACTTGGCTGGAGACGAGTCACTTTTGCCCAGTGTGCCGATATTCAATGCCGTTTGACATCCGAGACTACATAGACCAAGGTGCAAGCCCTATAATATCGATATCCGAGGGCACAAGCTCAGGCAAAGGTGCAAACTCTTCAATACCCGAGGGCTCAGGCCAACGTGCAAACTCTTCAACATCCGAGGGCTCGGTCTCCAGCTCAAGCCGACGGTGGACTCCTCCGCTGCTTATGATGATATCTTTTGCTGGTATAATAGCAGGTATAGTAACTATTACGCATGACGTCGTCTGTGCTCGGCTGGAGGCGGCGACCGAGAATCCTGCTATAGATAGAGAAACCCCCGATCTCAACATGATGTCAAAAGAGTTGGGTTATATCCAATTCGACGTGTGGAAGATTATCGATGGCACGCACCATGTAAACCAATTAGACTTTACGTTTGATCACTCTGTTGTGAAGCCACTGTCCCACGGGACGATGCTTACAAGAGACCTGCGTACGATGCTTTCGATGATTGGTGTCCCAGAAGATCGACAGCCTGGTGTTGTAGACCAAATATTGAAGGTGCTTCAAGTATCCGTGCCCATGCTGCCTATTGATGTCAGCATACTGGAGCAGATCTATAATGTATTTCCGCCAGTTTCACCGGCGGCTAGGCTGGAACCGGACGTCAAACTGGCGACGGAATCATTGATTGAGGGTCTGGCGAAAGTGAGTTTGGAAGAGCCACCTGAGTCACCGTGTACTATTTGTTTCGACGGCCTCGCATATCAACTCATTGCTCGTATGCCTTGCTCACACCGTTTTCATGCAAATTGCATCGTCCGGTGGCTGATCATAAATCACTTATGTCCCTTGTGCCGATATCCAATGCGAATCAAAAAGCAAGGCCAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

461

Amino Acids

51.59

Weight (kDa)

6.4

Isoelectric Point (pI)

48.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 131 - 173 1.1e-11 Ring finger domain
zf-RING_2 PF13639 409 - 449 5.3e-10 Ring finger domain
zf-C3HC4_2 PF13923 409 - 448 1e-07 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 409 - 435 7.9e-06 RING-like zinc finger
zf-C3HC4 PF00097 409 - 448 5e-06 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 421 - 449 3.9e-07 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 71
AasI GACNNNNNNGTC 1 cut(s) 173
AatII GACGTC 2 cut(s) 768, 1155
Acc36I ACCTGC 2 cut(s) 731, 984
AccB1I GGYRCC 1 cut(s) 12
AccI GTMKAC 2 cut(s) 137, 1032
AccII CGCG 1 cut(s) 8
AciI CCGC 8 cut(s) 29, 297, 300, 312, 704, 788, 1118, 1133
AclWI GGATC 3 cut(s) 26, 39, 426
AcoI YGGCCR 1 cut(s) 234
AcyI GRCGYC 4 cut(s) 13, 386, 765, 1152
AfaI GTAC 2 cut(s) 982, 1228
AflIII ACRYGT 1 cut(s) 870
AgsI TTSAA 7 cut(s) 206, 409, 525, 621, 657, 1045, 1055
AjiI CACGTC 1 cut(s) 871
AjnI CCWGG 3 cut(s) 414, 1021, 1374
AjuI GAANNNNNNNTTGG 2 cut(s) 1184, 1216
AleI CACNNNNGTG 1 cut(s) 287
AluBI AGCT 6 cut(s) 67, 115, 247, 371, 597, 681
AluI AGCT 6 cut(s) 67, 115, 247, 371, 597, 681
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 5 cut(s) 343, 485, 537, 679, 966
AlwI GGATC 3 cut(s) 26, 39, 426
Ama87I CYCGRG 1 cut(s) 626
AoxI GGCC 4 cut(s) 234, 637, 1243, 1372
ApeKI GCWGC 3 cut(s) 247, 706, 1072
ArsI GACNNNNNNTTYG 2 cut(s) 905, 937
AspLEI GCGC 1 cut(s) 15
AspS9I GGNCC 1 cut(s) 412
AsuHPI GGTGA 3 cut(s) 274, 1119, 1212
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 1 cut(s) 412
BaeGI GKGCMC 2 cut(s) 593, 1068
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 2 cut(s) 635, 671
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 3 cut(s) 234, 693, 1059
BccI CCATC 2 cut(s) 142, 881
BceAI ACGGC 3 cut(s) 221, 514, 1258
BcgI CGANNNNNNTGC 4 cut(s) 429, 463, 785, 819
BciT130I CCWGG 3 cut(s) 416, 1023, 1376
BciVI GTATCC 1 cut(s) 1069
BclI TGATCA 2 cut(s) 925, 1317
BcoDI GTCTC 5 cut(s) 343, 485, 537, 679, 966
BfaI CTAG 1 cut(s) 1137
BfmI CTRYAG 2 cut(s) 39, 807
BfoI RGCGCY 1 cut(s) 16
BfuAI ACCTGC 2 cut(s) 731, 984
BfuI GTATCC 1 cut(s) 1069
BglII AGATCT 1 cut(s) 1101
BisI GCNGC 6 cut(s) 248, 298, 707, 789, 1073, 1134
BlsI GCNGC 6 cut(s) 249, 299, 708, 790, 1074, 1135
Bme1390I CCNGG 3 cut(s) 416, 1023, 1376
Bme18I GGWCC 1 cut(s) 412
BmeT110I CYCGRG 1 cut(s) 626
BmgBI CACGTC 1 cut(s) 871
BmgT120I GGNCC 1 cut(s) 412
BmiI GGNNCC 4 cut(s) 14, 33, 158, 1146
BmrFI CCNGG 3 cut(s) 416, 1023, 1376
BmrI ACTGGG 1 cut(s) 503
BmsI GCATC 3 cut(s) 951, 975, 1311
BmuI ACTGGG 1 cut(s) 503
BplI GAGNNNNNCTC 2 cut(s) 84, 116
BpmI CTGGAG 4 cut(s) 509, 661, 803, 1115
Bpu10I CCTNAGC 2 cut(s) 598, 634
BpuEI CTTGAG 1 cut(s) 667
Bsa29I ATCGAT 2 cut(s) 578, 885
BsaHI GRCGYC 4 cut(s) 13, 386, 765, 1152
BsaI GGTCTC 2 cut(s) 679, 966
BsaJI CCNNGG 5 cut(s) 556, 585, 627, 663, 952
BsaWI WCCGGW 2 cut(s) 1147, 1308
Bse118I RCCGGY 1 cut(s) 1129
Bse1I ACTGG 4 cut(s) 509, 1098, 1121, 1164
Bse3DI GCAATG 1 cut(s) 1260
BseBI CCWGG 3 cut(s) 416, 1023, 1376
BseCI ATCGAT 2 cut(s) 578, 885
BseDI CCNNGG 5 cut(s) 556, 585, 627, 663, 952
BseGI GGATG 4 cut(s) 150, 370, 537, 659
BseMI GCAATG 1 cut(s) 1260
BseMII CTCAG 3 cut(s) 612, 648, 1206
BseNI ACTGG 4 cut(s) 509, 1098, 1121, 1164
BseRI GAGGAG 1 cut(s) 690
BseSI GKGCMC 2 cut(s) 593, 1068
BseXI GCAGC 3 cut(s) 234, 693, 1059
Bsh1236I CGCG 1 cut(s) 8
Bsh1285I CGRYCG 1 cut(s) 795
BshFI GGCC 4 cut(s) 236, 639, 1245, 1374
BshNI GGYRCC 1 cut(s) 12
BshVI ATCGAT 2 cut(s) 578, 885
BsiEI CGRYCG 1 cut(s) 795
BsiHKAI GWGCWC 1 cut(s) 778
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 3 cut(s) 1130, 1148, 1309
BsiWI CGTACG 1 cut(s) 980
BslFI GGGAC 6 cut(s) 161, 224, 934, 970, 989, 1320
BsmAI GTCTC 5 cut(s) 343, 485, 537, 679, 966
BsmBI CGTCTC 1 cut(s) 485
BsmFI GGGAC 6 cut(s) 161, 224, 934, 970, 989, 1320
BsnI GGCC 4 cut(s) 236, 639, 1245, 1374
Bso31I GGTCTC 2 cut(s) 679, 966
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 5 cut(s) 593, 635, 671, 778, 1068
Bsp143I GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
Bsp68I TCGCGA 1 cut(s) 8
BspACI CCGC 8 cut(s) 29, 297, 300, 312, 704, 788, 1118, 1133
BspANI GGCC 4 cut(s) 236, 639, 1245, 1374
BspCNI CTCAG 3 cut(s) 611, 647, 1207
BspDI ATCGAT 2 cut(s) 578, 885
BspFNI CGCG 1 cut(s) 8
BspLI GGNNCC 4 cut(s) 14, 33, 158, 1146
BspMAI CTGCAG 1 cut(s) 43
BspMI ACCTGC 2 cut(s) 731, 984
BspPI GGATC 3 cut(s) 26, 39, 426
BspQI GCTCTTC 1 cut(s) 1200
BspT107I GGYRCC 1 cut(s) 12
BspTNI GGTCTC 2 cut(s) 679, 966
BsrDI GCAATG 1 cut(s) 1260
BsrFI RCCGGY 1 cut(s) 1129
BsrI ACTGG 4 cut(s) 509, 1098, 1121, 1164
BssAI RCCGGY 1 cut(s) 1129
BssECI CCNNGG 5 cut(s) 556, 585, 627, 663, 952
BssMI GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
BssNAI GTATAC 1 cut(s) 138
BssNI GRCGYC 4 cut(s) 13, 386, 765, 1152
BssT1I CCWWGG 1 cut(s) 556
Bst1107I GTATAC 1 cut(s) 138
Bst2UI CCWGG 3 cut(s) 416, 1023, 1376
Bst4CI ACNGT 4 cut(s) 693, 948, 1224, 1286
Bst6I CTCTTC 3 cut(s) 622, 658, 1200
BstACI GRCGYC 4 cut(s) 13, 386, 765, 1152
BstAPI GCANNNNNTGC 1 cut(s) 256
BstC8I GCNNGC 4 cut(s) 6, 452, 565, 893
BstDEI CTNAG 3 cut(s) 598, 634, 1215
BstDSI CCRYGG 1 cut(s) 952
BstF5I GGATG 4 cut(s) 150, 370, 537, 659
BstFNI CGCG 1 cut(s) 8
BstH2I RGCGCY 1 cut(s) 16
BstHHI GCGC 1 cut(s) 15
BstKTI GATC 7 cut(s) 34, 421, 829, 928, 1015, 1104, 1320
BstMAI GTCTC 5 cut(s) 343, 485, 537, 679, 966
BstMBI GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
BstMCI CGRYCG 1 cut(s) 795
BstMWI GCNNNNNNNGC 5 cut(s) 10, 256, 513, 985, 1072
BstNI CCWGG 3 cut(s) 416, 1023, 1376
BstSCI CCNGG 3 cut(s) 414, 1021, 1374
BstSFI CTRYAG 2 cut(s) 39, 807
BstSLI GKGCMC 2 cut(s) 593, 1068
BstUI CGCG 1 cut(s) 8
BstV1I GCAGC 3 cut(s) 234, 693, 1059
BstX2I RGATCY 3 cut(s) 31, 418, 1101
BstYI RGATCY 3 cut(s) 31, 418, 1101
BstZ17I GTATAC 1 cut(s) 138
Bsu15I ATCGAT 2 cut(s) 578, 885
BsuI GTATCC 1 cut(s) 1069
BsuRI GGCC 4 cut(s) 236, 639, 1245, 1374
BsuTUI ATCGAT 2 cut(s) 578, 885
BtgI CCRYGG 1 cut(s) 952
BtrI CACGTC 1 cut(s) 871
BtsCI GGATG 4 cut(s) 150, 370, 537, 659
BtsIMutI CAGTG 2 cut(s) 516, 944
BtuMI TCGCGA 1 cut(s) 8
BveI ACCTGC 2 cut(s) 731, 984
Cac8I GCNNGC 4 cut(s) 6, 452, 565, 893
CfoI GCGC 1 cut(s) 15
Cfr10I RCCGGY 1 cut(s) 1129
Cfr13I GGNCC 1 cut(s) 412
ClaI ATCGAT 2 cut(s) 578, 885
CseI GACGC 1 cut(s) 394
Csp6I GTAC 2 cut(s) 981, 1227
CviAII CATG 8 cut(s) 169, 393, 464, 761, 835, 899, 1069, 1292
CviQI GTAC 2 cut(s) 981, 1227
DdeI CTNAG 3 cut(s) 598, 634, 1215
DinI GGCGCC 1 cut(s) 14
DpnI GATC 7 cut(s) 33, 420, 828, 927, 1014, 1103, 1319
DpnII GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
DrdI GACNNNNNNGTC 1 cut(s) 173
DseDI GACNNNNNNGTC 1 cut(s) 173
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 3 cut(s) 622, 658, 1200
EarI CTCTTC 3 cut(s) 622, 658, 1200
EciI GGCGGA 2 cut(s) 315, 1107
Eco130I CCWWGG 1 cut(s) 556
Eco24I GRGCYC 2 cut(s) 635, 671
Eco31I GGTCTC 2 cut(s) 679, 966
Eco32I GATATC 4 cut(s) 109, 582, 720, 1349
Eco47I GGWCC 1 cut(s) 412
Eco88I CYCGRG 1 cut(s) 626
EcoO109I RGGNCCY 1 cut(s) 412
EcoRII CCWGG 3 cut(s) 414, 1021, 1374
EcoRV GATATC 4 cut(s) 109, 582, 720, 1349
EcoT14I CCWWGG 1 cut(s) 556
EcoT22I ATGCAT 1 cut(s) 261
EcoT38I GRGCYC 2 cut(s) 635, 671
EgeI GGCGCC 1 cut(s) 14
EheI GGCGCC 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 556
Esp3I CGTCTC 1 cut(s) 485
FaeI CATG 8 cut(s) 172, 396, 467, 764, 838, 902, 1072, 1295
FaqI GGGAC 6 cut(s) 161, 224, 934, 970, 989, 1320
FatI CATG 8 cut(s) 168, 392, 463, 760, 834, 898, 1068, 1291
FauI CCCGC 1 cut(s) 319
FauNDI CATATG 2 cut(s) 261, 429
FbaI TGATCA 2 cut(s) 925, 1317
FblI GTMKAC 2 cut(s) 137, 1032
Fnu4HI GCNGC 6 cut(s) 248, 298, 707, 789, 1073, 1134
FokI GGATG 4 cut(s) 157, 377, 524, 646
FriOI GRGCYC 2 cut(s) 635, 671
Fsp4HI GCNGC 6 cut(s) 248, 298, 707, 789, 1073, 1134
FspBI CTAG 1 cut(s) 1137
GlaI GCGC 1 cut(s) 14
GluI GCNGC 6 cut(s) 248, 298, 707, 789, 1073, 1134
GsuI CTGGAG 4 cut(s) 509, 661, 803, 1115
HaeII RGCGCY 1 cut(s) 16
HaeIII GGCC 4 cut(s) 236, 639, 1245, 1374
HapII CCGG 3 cut(s) 1130, 1148, 1309
HgaI GACGC 1 cut(s) 394
HhaI GCGC 1 cut(s) 15
Hin1I GRCGYC 4 cut(s) 13, 386, 765, 1152
Hin1II CATG 8 cut(s) 172, 396, 467, 764, 838, 902, 1072, 1295
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HindIII AAGCTT 1 cut(s) 65
HinfI GANTC 8 cut(s) 44, 93, 496, 697, 799, 1169, 1217, 1359
HpaII CCGG 3 cut(s) 1130, 1148, 1309
HphI GGTGA 3 cut(s) 274, 1119, 1212
Hpy166II GTNNAC 6 cut(s) 138, 292, 696, 904, 1033, 1227
Hpy188I TCNGA 6 cut(s) 36, 92, 166, 542, 586, 664
Hpy188III TCNNGA 2 cut(s) 7, 123
Hpy8I GTNNAC 6 cut(s) 138, 292, 696, 904, 1033, 1227
Hpy99I CGWCG 5 cut(s) 693, 770, 872, 1168, 1244
HpyAV CCTTC 5 cut(s) 120, 214, 399, 403, 1039
HpyCH4III ACNGT 4 cut(s) 693, 948, 1224, 1286
HpyCH4IV ACGT 6 cut(s) 456, 643, 765, 870, 920, 1152
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 256, 513, 985, 1072
HpyF3I CTNAG 3 cut(s) 598, 634, 1215
HpySE526I ACGT 6 cut(s) 456, 643, 765, 870, 920, 1152
Hsp92I GRCGYC 4 cut(s) 13, 386, 765, 1152
Hsp92II CATG 8 cut(s) 172, 396, 467, 764, 838, 902, 1072, 1295
HspAI GCGC 1 cut(s) 13
KasI GGCGCC 1 cut(s) 12
Ksp22I TGATCA 2 cut(s) 925, 1317
Kzo9I GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
LguI GCTCTTC 1 cut(s) 1200
LmnI GCTCC 1 cut(s) 1096
Lsp1109I GCAGC 3 cut(s) 234, 693, 1059
LweI GCATC 3 cut(s) 951, 975, 1311
MaeI CTAG 1 cut(s) 1137
MaeII ACGT 6 cut(s) 456, 643, 765, 870, 920, 1152
MaeIII GTNAC 4 cut(s) 478, 497, 748, 1218
MalI GATC 7 cut(s) 33, 420, 828, 927, 1014, 1103, 1319
MboI GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
MboII GAAGA 7 cut(s) 68, 142, 609, 645, 889, 1022, 1217
MflI RGATCY 3 cut(s) 31, 418, 1101
MhlI GDGCHC 5 cut(s) 593, 635, 671, 778, 1068
MluCI AATT 5 cut(s) 315, 327, 863, 908, 1297
Mly113I GGCGCC 1 cut(s) 13
MlyI GAGTC 4 cut(s) 102, 505, 691, 1226
MmeI TCCRAC 2 cut(s) 59, 189
MnlI CCTC 9 cut(s) 3, 74, 580, 622, 658, 711, 778, 1174, 1256
Mph1103I ATGCAT 1 cut(s) 261
MseI TTAA 3 cut(s) 216, 318, 1381
MslI CAYNNNNRTG 1 cut(s) 287
MspA1I CMGCKG 2 cut(s) 297, 706
MspI CCGG 3 cut(s) 1130, 1148, 1309
MspR9I CCNGG 3 cut(s) 416, 1023, 1376
MvaI CCWGG 3 cut(s) 416, 1023, 1376
MvnI CGCG 1 cut(s) 8
MwoI GCNNNNNNNGC 5 cut(s) 10, 256, 513, 985, 1072
NarI GGCGCC 1 cut(s) 13
NdeI CATATG 2 cut(s) 261, 429
NdeII GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
NlaIII CATG 8 cut(s) 172, 396, 467, 764, 838, 902, 1072, 1295
NlaIV GGNNCC 4 cut(s) 14, 33, 158, 1146
NmeAIII GCCGAG 1 cut(s) 757
NmuCI GTSAC 2 cut(s) 497, 1218
NruI TCGCGA 1 cut(s) 8
NsiI ATGCAT 1 cut(s) 261
OliI CACNNNNGTG 1 cut(s) 287
PciSI GCTCTTC 1 cut(s) 1200
PcsI WCGNNNNNNNCGW 1 cut(s) 989
PfeI GAWTC 4 cut(s) 44, 799, 1169, 1359
Pfl23II CGTACG 1 cut(s) 980
PflFI GACNNNGTC 1 cut(s) 767
PkrI GCNGC 6 cut(s) 249, 299, 708, 790, 1074, 1135
PleI GAGTC 4 cut(s) 101, 504, 691, 1225
PluTI GGCGCC 1 cut(s) 16
PpsI GAGTC 4 cut(s) 101, 504, 691, 1225
PpuMI RGGWCCY 1 cut(s) 412
PsiI TTATAA 1 cut(s) 71
Psp5II RGGWCCY 1 cut(s) 412
Psp6I CCWGG 3 cut(s) 414, 1021, 1374
PspGI CCWGG 3 cut(s) 414, 1021, 1374
PspLI CGTACG 1 cut(s) 980
PspN4I GGNNCC 4 cut(s) 14, 33, 158, 1146
PspPI GGNCC 1 cut(s) 412
PspPPI RGGWCCY 1 cut(s) 412
PstI CTGCAG 1 cut(s) 43
PsuI RGATCY 3 cut(s) 31, 418, 1101
PsyI GACNNNGTC 1 cut(s) 767
RruI TCGCGA 1 cut(s) 8
RsaI GTAC 2 cut(s) 982, 1228
RsaNI GTAC 2 cut(s) 981, 1227
RseI CAYNNNNRTG 1 cut(s) 287
SapI GCTCTTC 1 cut(s) 1200
SaqAI TTAA 3 cut(s) 216, 318, 1381
SatI GCNGC 6 cut(s) 248, 298, 707, 789, 1073, 1134
Sau3AI GATC 7 cut(s) 31, 418, 826, 925, 1012, 1101, 1317
Sau96I GGNCC 1 cut(s) 412
SchI GAGTC 4 cut(s) 102, 505, 691, 1226
ScrFI CCNGG 3 cut(s) 416, 1023, 1376
SduI GDGCHC 5 cut(s) 593, 635, 671, 778, 1068
SfaNI GCATC 3 cut(s) 951, 975, 1311
SfcI CTRYAG 2 cut(s) 39, 807
SfoI GGCGCC 1 cut(s) 14
SgrAI CRCCGGYG 1 cut(s) 1129
SinI GGWCC 1 cut(s) 412
SmiMI CAYNNNNRTG 1 cut(s) 287
SmlI CTYRAG 1 cut(s) 682
SmoI CTYRAG 1 cut(s) 682
Sse9I AATT 5 cut(s) 315, 327, 863, 908, 1297
SsiI CCGC 8 cut(s) 29, 297, 300, 312, 704, 788, 1118, 1133
SspDI GGCGCC 1 cut(s) 12
SspI AATATT 2 cut(s) 213, 1041
SspMI CTAG 1 cut(s) 1137
StyD4I CCNGG 3 cut(s) 414, 1021, 1374
StyI CCWWGG 1 cut(s) 556
TaaI ACNGT 4 cut(s) 693, 948, 1224, 1286
TaiI ACGT 6 cut(s) 459, 646, 768, 873, 923, 1155
TaqII GACCGA 2 cut(s) 661, 809
TasI AATT 5 cut(s) 315, 327, 863, 908, 1297
TatI WGTACW 1 cut(s) 1226
TauI GCSGC 3 cut(s) 300, 791, 1136
TfiI GAWTC 4 cut(s) 44, 799, 1169, 1359
Tru1I TTAA 3 cut(s) 216, 318, 1381
Tru9I TTAA 3 cut(s) 216, 318, 1381
TscAI CASTG 2 cut(s) 516, 951
TseFI GTSAC 2 cut(s) 497, 1218
TseI GCWGC 3 cut(s) 247, 706, 1072
Tsp45I GTSAC 2 cut(s) 497, 1218
TspDTI ATGAA 4 cut(s) 69, 381, 381, 1280
TspGWI ACGGA 4 cut(s) 89, 397, 1051, 1181
TspRI CASTG 2 cut(s) 516, 951
Tth111I GACNNNGTC 1 cut(s) 767
VpaK11BI GGWCC 1 cut(s) 412
XmiI GTMKAC 2 cut(s) 137, 1032
XspI CTAG 1 cut(s) 1137
ZraI GACGTC 2 cut(s) 766, 1153
Zsp2I ATGCAT 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.