FvH4_6g19273

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
12768670 .. 12769042
373 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g19273.t1

Sequence Viewer

Length: 246 bp
ATGCCGGCGTCGTTTGGATCGTCTGTTTCAAAAGGGTTTTCCCGTTATTGCACTTTTAGAGGATGTTTTGTATGGTTCAAAGATATGGGTTATGGAGATCCTTGTAGGGGTTATATTCTTCTGTTCTTGTATGGGATTGTATTGGTTGATTTTCGAGTTTTCTTCGGCAGATCTAGTGATGGTCCTGGGTTATGTTTGGGTGGTGATGGTGGCGTCAGCGTCTCCATACCCCTTGCTCCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

82

Amino Acids

8.72

Weight (kDa)

7.63

Isoelectric Point (pI)

28.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 25, 92
AcyI GRCGYC 2 cut(s) 8, 213
AfiI CCNNNNNNNGG 1 cut(s) 107
AgsI TTSAA 2 cut(s) 30, 79
AjnI CCWGG 1 cut(s) 184
Alw26I GTCTC 1 cut(s) 226
AlwI GGATC 2 cut(s) 25, 92
AspS9I GGNCC 1 cut(s) 182
AsuHPI GGTGA 1 cut(s) 215
AvaII GGWCC 1 cut(s) 182
BccI CCATC 2 cut(s) 173, 200
BciT130I CCWGG 1 cut(s) 186
BcoDI GTCTC 1 cut(s) 226
BfaI CTAG 1 cut(s) 174
BglII AGATCT 1 cut(s) 170
Bme1390I CCNGG 1 cut(s) 186
Bme18I GGWCC 1 cut(s) 182
BmgT120I GGNCC 1 cut(s) 182
BmrFI CCNGG 1 cut(s) 186
BsaHI GRCGYC 2 cut(s) 8, 213
BsaJI CCNNGG 1 cut(s) 185
Bsc4I CCNNNNNNNGG 1 cut(s) 107
Bse118I RCCGGY 1 cut(s) 4
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 1 cut(s) 185
BseGI GGATG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 107
BsiSI CCGG 1 cut(s) 5
BslI CCNNNNNNNGG 1 cut(s) 107
BsmAI GTCTC 1 cut(s) 226
BsmBI CGTCTC 1 cut(s) 226
Bsp143I GATC 3 cut(s) 17, 97, 170
BspPI GGATC 2 cut(s) 25, 92
BsrFI RCCGGY 1 cut(s) 4
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 1 cut(s) 185
BssMI GATC 3 cut(s) 17, 97, 170
BssNI GRCGYC 2 cut(s) 8, 213
Bst2UI CCWGG 1 cut(s) 186
BstACI GRCGYC 2 cut(s) 8, 213
BstC8I GCNNGC 1 cut(s) 6
BstF5I GGATG 1 cut(s) 68
BstKTI GATC 3 cut(s) 20, 100, 173
BstMAI GTCTC 1 cut(s) 226
BstMBI GATC 3 cut(s) 17, 97, 170
BstNI CCWGG 1 cut(s) 186
BstSCI CCNGG 1 cut(s) 184
BstX2I RGATCY 2 cut(s) 97, 170
BstYI RGATCY 2 cut(s) 97, 170
BtsCI GGATG 1 cut(s) 68
Cac8I GCNNGC 1 cut(s) 6
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 1 cut(s) 182
CseI GACGC 2 cut(s) 202, 208
DpnI GATC 3 cut(s) 19, 99, 172
DpnII GATC 3 cut(s) 17, 97, 170
Eco47I GGWCC 1 cut(s) 182
EcoRII CCWGG 1 cut(s) 184
Esp3I CGTCTC 1 cut(s) 226
FaiI YATR 7 cut(s) 73, 86, 93, 114, 132, 193, 227
FokI GGATG 1 cut(s) 75
FspBI CTAG 1 cut(s) 174
HapII CCGG 1 cut(s) 5
HgaI GACGC 2 cut(s) 202, 208
Hin1I GRCGYC 2 cut(s) 8, 213
HpaII CCGG 1 cut(s) 5
HphI GGTGA 1 cut(s) 215
Hpy188III TCNNGA 1 cut(s) 239
Hpy99I CGWCG 1 cut(s) 13
HpyCH4V TGCA 1 cut(s) 51
Hsp92I GRCGYC 2 cut(s) 8, 213
KroI GCCGGC 1 cut(s) 4
KroNI GCCGGC 1 cut(s) 6
Kzo9I GATC 3 cut(s) 17, 97, 170
LmnI GCTCC 1 cut(s) 241
LpnPI CCDG 3 cut(s) 18, 171, 198
MaeI CTAG 1 cut(s) 174
MalI GATC 3 cut(s) 19, 99, 172
MboI GATC 3 cut(s) 17, 97, 170
MboII GAAGA 2 cut(s) 110, 154
MflI RGATCY 2 cut(s) 97, 170
MnlI CCTC 1 cut(s) 53
MroNI GCCGGC 1 cut(s) 4
MseI TTAA 1 cut(s) 244
MspI CCGG 1 cut(s) 5
MspR9I CCNGG 1 cut(s) 186
MvaI CCWGG 1 cut(s) 186
NaeI GCCGGC 1 cut(s) 6
NdeII GATC 3 cut(s) 17, 97, 170
NgoMIV GCCGGC 1 cut(s) 4
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PdiI GCCGGC 1 cut(s) 6
Psp6I CCWGG 1 cut(s) 184
PspGI CCWGG 1 cut(s) 184
PspPI GGNCC 1 cut(s) 182
PsuI RGATCY 2 cut(s) 97, 170
SaqAI TTAA 1 cut(s) 244
Sau3AI GATC 3 cut(s) 17, 97, 170
Sau96I GGNCC 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 186
SgeI CNNG 8 cut(s) 17, 54, 114, 139, 167, 186, 197, 198
SinI GGWCC 1 cut(s) 182
SspMI CTAG 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 184
TaqI TCGA 1 cut(s) 154
Tru1I TTAA 1 cut(s) 244
Tru9I TTAA 1 cut(s) 244
VpaK11BI GGWCC 1 cut(s) 182
XspI CTAG 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.