Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07810 AT3G07810 |
| fragaria_vesca | FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 |
| malus_domestica | MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1 |
| prunus_persica | Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 |
| pyrus_communis | pycom09g04550 pycom17g10350 pycom17g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871 |
| rosa_laevigata | RLG00000020945 RLG00000020948 |
| rosa_multiflora | Rmu_co8440963.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092640 Rroxscaffold_2G00092680 |
| rosa_rugosa | Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900 |
| rosa_samantha | Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700 |
| rosa_wichuraiana | Rw2G043110 Rw2G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 798 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 698, 779 |
| AccBSI | CCGCTC | 1 cut(s) | 1142 |
| AciI | CCGC | 3 cut(s) | 179, 1042, 1142 |
| AclWI | GGATC | 2 cut(s) | 126, 1250 |
| AcsI | RAATTY | 3 cut(s) | 958, 967, 1276 |
| AfaI | GTAC | 3 cut(s) | 82, 658, 1168 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 305, 587, 698, 725, 779, 924, 1067 |
| AflII | CTTAAG | 1 cut(s) | 494 |
| AgsI | TTSAA | 6 cut(s) | 367, 380, 530, 852, 966, 1222 |
| AjnI | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1354 |
| AluBI | AGCT | 8 cut(s) | 239, 621, 813, 915, 949, 1328, 1343, 1350 |
| AluI | AGCT | 8 cut(s) | 239, 621, 813, 915, 949, 1328, 1343, 1350 |
| Alw21I | GWGCWC | 2 cut(s) | 139, 951 |
| Alw26I | GTCTC | 1 cut(s) | 1381 |
| AlwI | GGATC | 2 cut(s) | 126, 1250 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 698, 1175, 1331 |
| AoxI | GGCC | 3 cut(s) | 130, 307, 434 |
| ApeKI | GCWGC | 5 cut(s) | 576, 999, 1190, 1325, 1409 |
| ApoI | RAATTY | 3 cut(s) | 958, 967, 1276 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 913, 945 |
| AspA2I | CCTAGG | 1 cut(s) | 245 |
| AspS9I | GGNCC | 4 cut(s) | 302, 566, 1292, 1298 |
| AsuC2I | CCSGG | 1 cut(s) | 1296 |
| AsuHPI | GGTGA | 4 cut(s) | 371, 552, 1050, 1130 |
| AvaII | GGWCC | 4 cut(s) | 302, 566, 1292, 1298 |
| AvrII | CCTAGG | 1 cut(s) | 245 |
| BanII | GRGCYC | 2 cut(s) | 833, 951 |
| BauI | CACGAG | 1 cut(s) | 138 |
| BbsI | GAAGAC | 1 cut(s) | 1038 |
| Bbv12I | GWGCWC | 2 cut(s) | 139, 951 |
| BbvI | GCAGC | 5 cut(s) | 588, 1011, 1177, 1337, 1396 |
| BccI | CCATC | 5 cut(s) | 214, 517, 875, 1205, 1283 |
| BceAI | ACGGC | 1 cut(s) | 117 |
| BciT130I | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1356 |
| BclI | TGATCA | 2 cut(s) | 108, 418 |
| BcnI | CCSGG | 1 cut(s) | 1296 |
| BcoDI | GTCTC | 1 cut(s) | 1381 |
| BfaI | CTAG | 3 cut(s) | 246, 438, 1414 |
| BfmI | CTRYAG | 1 cut(s) | 126 |
| BfrI | CTTAAG | 1 cut(s) | 494 |
| BisI | GCNGC | 5 cut(s) | 577, 1000, 1191, 1326, 1410 |
| BlnI | CCTAGG | 1 cut(s) | 245 |
| BlsI | GCNGC | 5 cut(s) | 578, 1001, 1192, 1327, 1411 |
| Bme1390I | CCNGG | 7 cut(s) | 300, 306, 564, 762, 774, 1296, 1356 |
| Bme18I | GGWCC | 4 cut(s) | 302, 566, 1292, 1298 |
| BmgT120I | GGNCC | 4 cut(s) | 302, 566, 1292, 1298 |
| BmiI | GGNNCC | 5 cut(s) | 568, 1114, 1216, 1294, 1300 |
| BmrFI | CCNGG | 7 cut(s) | 300, 306, 564, 762, 774, 1296, 1356 |
| BmrI | ACTGGG | 1 cut(s) | 564 |
| BmsI | GCATC | 3 cut(s) | 294, 350, 1202 |
| BmuI | ACTGGG | 1 cut(s) | 564 |
| BpiI | GAAGAC | 1 cut(s) | 1038 |
| BpmI | CTGGAG | 2 cut(s) | 282, 1050 |
| BpuEI | CTTGAG | 1 cut(s) | 1047 |
| BpuMI | CCSGG | 1 cut(s) | 1296 |
| BsaJI | CCNNGG | 3 cut(s) | 245, 289, 772 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 305, 587, 698, 725, 779, 924, 1067 |
| Bse118I | RCCGGY | 1 cut(s) | 1115 |
| Bse1I | ACTGG | 4 cut(s) | 570, 692, 1033, 1043 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| BseBI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1356 |
| BseDI | CCNNGG | 3 cut(s) | 245, 289, 772 |
| BseGI | GGATG | 5 cut(s) | 225, 256, 285, 341, 902 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 305, 587, 698, 725, 779, 924, 1067 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseMII | CTCAG | 3 cut(s) | 480, 596, 653 |
| BseNI | ACTGG | 4 cut(s) | 570, 692, 1033, 1043 |
| BseXI | GCAGC | 5 cut(s) | 588, 1011, 1177, 1337, 1396 |
| BsgI | GTGCAG | 2 cut(s) | 561, 1344 |
| BshFI | GGCC | 3 cut(s) | 132, 309, 436 |
| BsiHKAI | GWGCWC | 2 cut(s) | 139, 951 |
| BsiSI | CCGG | 2 cut(s) | 1116, 1296 |
| BslFI | GGGAC | 5 cut(s) | 59, 227, 403, 852, 1278 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 305, 587, 698, 725, 779, 924, 1067 |
| BsmAI | GTCTC | 1 cut(s) | 1381 |
| BsmFI | GGGAC | 5 cut(s) | 59, 227, 403, 852, 1278 |
| BsnI | GGCC | 3 cut(s) | 132, 309, 436 |
| Bsp1286I | GDGCHC | 3 cut(s) | 139, 833, 951 |
| Bsp143I | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| BspACI | CCGC | 3 cut(s) | 179, 1042, 1142 |
| BspANI | GGCC | 3 cut(s) | 132, 309, 436 |
| BspCNI | CTCAG | 3 cut(s) | 479, 597, 652 |
| BspHI | TCATGA | 2 cut(s) | 111, 505 |
| BspLI | GGNNCC | 5 cut(s) | 568, 1114, 1216, 1294, 1300 |
| BspPI | GGATC | 2 cut(s) | 126, 1250 |
| BspTI | CTTAAG | 1 cut(s) | 494 |
| BsrBI | CCGCTC | 1 cut(s) | 1142 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| BsrFI | RCCGGY | 1 cut(s) | 1115 |
| BsrI | ACTGG | 4 cut(s) | 570, 692, 1033, 1043 |
| BssAI | RCCGGY | 1 cut(s) | 1115 |
| BssECI | CCNNGG | 3 cut(s) | 245, 289, 772 |
| BssMI | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| BssSI | CACGAG | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 2 cut(s) | 245, 289 |
| Bst2BI | CACGAG | 1 cut(s) | 138 |
| Bst2UI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1356 |
| BstAFI | CTTAAG | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 1 cut(s) | 540 |
| BstDEI | CTNAG | 3 cut(s) | 466, 605, 639 |
| BstF5I | GGATG | 5 cut(s) | 225, 256, 285, 341, 902 |
| BstKTI | GATC | 6 cut(s) | 61, 111, 121, 421, 1258, 1271 |
| BstMAI | GTCTC | 1 cut(s) | 1381 |
| BstMBI | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1020 |
| BstNI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1356 |
| BstSCI | CCNGG | 7 cut(s) | 298, 304, 562, 760, 772, 1294, 1354 |
| BstSFI | CTRYAG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 5 cut(s) | 588, 1011, 1177, 1337, 1396 |
| BstV2I | GAAGAC | 1 cut(s) | 1038 |
| BstX2I | RGATCY | 1 cut(s) | 1255 |
| BstYI | RGATCY | 1 cut(s) | 1255 |
| BsuRI | GGCC | 3 cut(s) | 132, 309, 436 |
| BtsCI | GGATG | 5 cut(s) | 225, 256, 285, 341, 902 |
| BtsI | GCAGTG | 3 cut(s) | 111, 483, 1327 |
| BtsIMutI | CAGTG | 8 cut(s) | 19, 111, 183, 276, 345, 483, 1168, 1327 |
| Cac8I | GCNNGC | 1 cut(s) | 540 |
| CaiI | CAGNNNCTG | 3 cut(s) | 698, 1175, 1331 |
| CciI | TCATGA | 2 cut(s) | 111, 505 |
| Cfr10I | RCCGGY | 1 cut(s) | 1115 |
| Cfr13I | GGNCC | 4 cut(s) | 302, 566, 1292, 1298 |
| CseI | GACGC | 1 cut(s) | 1167 |
| Csp6I | GTAC | 3 cut(s) | 81, 657, 1167 |
| CviAII | CATG | 4 cut(s) | 112, 506, 919, 982 |
| CviQI | GTAC | 3 cut(s) | 81, 657, 1167 |
| DdeI | CTNAG | 3 cut(s) | 466, 605, 639 |
| DpnI | GATC | 6 cut(s) | 60, 110, 120, 420, 1257, 1270 |
| DpnII | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| Ecl136II | GAGCTC | 1 cut(s) | 949 |
| Eco130I | CCWWGG | 2 cut(s) | 245, 289 |
| Eco147I | AGGCCT | 1 cut(s) | 436 |
| Eco24I | GRGCYC | 2 cut(s) | 833, 951 |
| Eco47I | GGWCC | 4 cut(s) | 302, 566, 1292, 1298 |
| Eco53kI | GAGCTC | 1 cut(s) | 949 |
| EcoICRI | GAGCTC | 1 cut(s) | 949 |
| EcoRII | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1354 |
| EcoT14I | CCWWGG | 2 cut(s) | 245, 289 |
| EcoT38I | GRGCYC | 2 cut(s) | 833, 951 |
| ErhI | CCWWGG | 2 cut(s) | 245, 289 |
| FaeI | CATG | 4 cut(s) | 115, 509, 922, 985 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 359, 391 |
| FaqI | GGGAC | 5 cut(s) | 59, 227, 403, 852, 1278 |
| FatI | CATG | 4 cut(s) | 111, 505, 918, 981 |
| FauI | CCCGC | 1 cut(s) | 1135 |
| FbaI | TGATCA | 2 cut(s) | 108, 418 |
| Fnu4HI | GCNGC | 5 cut(s) | 577, 1000, 1191, 1326, 1410 |
| FokI | GGATG | 5 cut(s) | 232, 263, 272, 328, 889 |
| FriOI | GRGCYC | 2 cut(s) | 833, 951 |
| Fsp4HI | GCNGC | 5 cut(s) | 577, 1000, 1191, 1326, 1410 |
| FspBI | CTAG | 3 cut(s) | 246, 438, 1414 |
| GluI | GCNGC | 5 cut(s) | 577, 1000, 1191, 1326, 1410 |
| GsuI | CTGGAG | 2 cut(s) | 282, 1050 |
| HaeIII | GGCC | 3 cut(s) | 132, 309, 436 |
| HapII | CCGG | 2 cut(s) | 1116, 1296 |
| HgaI | GACGC | 1 cut(s) | 1167 |
| Hin1II | CATG | 4 cut(s) | 115, 509, 922, 985 |
| HincII | GTYRAC | 2 cut(s) | 616, 1036 |
| HindII | GTYRAC | 2 cut(s) | 616, 1036 |
| HinfI | GANTC | 2 cut(s) | 464, 1099 |
| HpaI | GTTAAC | 1 cut(s) | 1036 |
| HpaII | CCGG | 2 cut(s) | 1116, 1296 |
| HphI | GGTGA | 4 cut(s) | 371, 552, 1050, 1130 |
| Hpy166II | GTNNAC | 2 cut(s) | 616, 1036 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 66, 469, 606, 768, 1282, 1333 |
| Hpy188III | TCNNGA | 4 cut(s) | 112, 367, 506, 990 |
| Hpy8I | GTNNAC | 2 cut(s) | 616, 1036 |
| HpyAV | CCTTC | 4 cut(s) | 109, 210, 1149, 1228 |
| HpyCH4IV | ACGT | 1 cut(s) | 1335 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 542, 791, 1193, 1325 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1020 |
| HpyF3I | CTNAG | 3 cut(s) | 466, 605, 639 |
| HpySE526I | ACGT | 1 cut(s) | 1335 |
| Hsp92II | CATG | 4 cut(s) | 115, 509, 922, 985 |
| Ksp22I | TGATCA | 2 cut(s) | 108, 418 |
| KspAI | GTTAAC | 1 cut(s) | 1036 |
| Kzo9I | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| LmnI | GCTCC | 5 cut(s) | 920, 946, 1112, 1139, 1214 |
| Lsp1109I | GCAGC | 5 cut(s) | 588, 1011, 1177, 1337, 1396 |
| LweI | GCATC | 3 cut(s) | 294, 350, 1202 |
| MaeI | CTAG | 3 cut(s) | 246, 438, 1414 |
| MaeII | ACGT | 1 cut(s) | 1335 |
| MaeIII | GTNAC | 5 cut(s) | 349, 359, 371, 1118, 1127 |
| MalI | GATC | 6 cut(s) | 60, 110, 120, 420, 1257, 1270 |
| MbiI | CCGCTC | 1 cut(s) | 1142 |
| MboI | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| MboII | GAAGA | 4 cut(s) | 68, 532, 954, 1038 |
| MflI | RGATCY | 1 cut(s) | 1255 |
| MhlI | GDGCHC | 3 cut(s) | 139, 833, 951 |
| MluCI | AATT | 8 cut(s) | 20, 793, 847, 958, 967, 1053, 1276, 1404 |
| MlyI | GAGTC | 1 cut(s) | 458 |
| MmeI | TCCRAC | 3 cut(s) | 33, 310, 643 |
| MseI | TTAA | 4 cut(s) | 495, 627, 1035, 1380 |
| MspCI | CTTAAG | 1 cut(s) | 494 |
| MspI | CCGG | 2 cut(s) | 1116, 1296 |
| MspR9I | CCNGG | 7 cut(s) | 300, 306, 564, 762, 774, 1296, 1356 |
| MvaI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1356 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1020 |
| NciI | CCSGG | 1 cut(s) | 1296 |
| NdeII | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| NlaIII | CATG | 4 cut(s) | 115, 509, 922, 985 |
| NlaIV | GGNNCC | 5 cut(s) | 568, 1114, 1216, 1294, 1300 |
| NmuCI | GTSAC | 3 cut(s) | 349, 359, 1118 |
| PagI | TCATGA | 2 cut(s) | 111, 505 |
| PceI | AGGCCT | 1 cut(s) | 436 |
| PfeI | GAWTC | 1 cut(s) | 1099 |
| PflFI | GACNNNGTC | 2 cut(s) | 185, 570 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 698, 779 |
| PfoI | TCCNGGA | 1 cut(s) | 1294 |
| PkrI | GCNGC | 5 cut(s) | 578, 1001, 1192, 1327, 1411 |
| PleI | GAGTC | 1 cut(s) | 458 |
| PpsI | GAGTC | 1 cut(s) | 458 |
| PsiI | TTATAA | 1 cut(s) | 798 |
| Psp124BI | GAGCTC | 1 cut(s) | 951 |
| Psp6I | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1354 |
| PspGI | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1354 |
| PspN4I | GGNNCC | 5 cut(s) | 568, 1114, 1216, 1294, 1300 |
| PspPI | GGNCC | 4 cut(s) | 302, 566, 1292, 1298 |
| PstNI | CAGNNNCTG | 3 cut(s) | 698, 1175, 1331 |
| PsuI | RGATCY | 1 cut(s) | 1255 |
| PsyI | GACNNNGTC | 2 cut(s) | 185, 570 |
| RsaI | GTAC | 3 cut(s) | 82, 658, 1168 |
| RsaNI | GTAC | 3 cut(s) | 81, 657, 1167 |
| SacI | GAGCTC | 1 cut(s) | 951 |
| SaqAI | TTAA | 4 cut(s) | 495, 627, 1035, 1380 |
| SatI | GCNGC | 5 cut(s) | 577, 1000, 1191, 1326, 1410 |
| Sau3AI | GATC | 6 cut(s) | 58, 108, 118, 418, 1255, 1268 |
| Sau96I | GGNCC | 4 cut(s) | 302, 566, 1292, 1298 |
| SchI | GAGTC | 1 cut(s) | 458 |
| ScrFI | CCNGG | 7 cut(s) | 300, 306, 564, 762, 774, 1296, 1356 |
| SduI | GDGCHC | 3 cut(s) | 139, 833, 951 |
| SfaNI | GCATC | 3 cut(s) | 294, 350, 1202 |
| SfcI | CTRYAG | 1 cut(s) | 126 |
| SinI | GGWCC | 4 cut(s) | 302, 566, 1292, 1298 |
| SmlI | CTYRAG | 2 cut(s) | 494, 1062 |
| SmoI | CTYRAG | 2 cut(s) | 494, 1062 |
| Sse9I | AATT | 8 cut(s) | 20, 793, 847, 958, 967, 1053, 1276, 1404 |
| SseBI | AGGCCT | 1 cut(s) | 436 |
| SsiI | CCGC | 3 cut(s) | 179, 1042, 1142 |
| SspMI | CTAG | 3 cut(s) | 246, 438, 1414 |
| SstI | GAGCTC | 1 cut(s) | 951 |
| StuI | AGGCCT | 1 cut(s) | 436 |
| StyD4I | CCNGG | 7 cut(s) | 298, 304, 562, 760, 772, 1294, 1354 |
| StyI | CCWWGG | 2 cut(s) | 245, 289 |
| TaiI | ACGT | 1 cut(s) | 1338 |
| TaqI | TCGA | 2 cut(s) | 121, 706 |
| TasI | AATT | 8 cut(s) | 20, 793, 847, 958, 967, 1053, 1276, 1404 |
| TatI | WGTACW | 1 cut(s) | 656 |
| TfiI | GAWTC | 1 cut(s) | 1099 |
| Tru1I | TTAA | 4 cut(s) | 495, 627, 1035, 1380 |
| Tru9I | TTAA | 4 cut(s) | 495, 627, 1035, 1380 |
| TscAI | CASTG | 8 cut(s) | 19, 111, 190, 283, 352, 483, 1168, 1327 |
| TseFI | GTSAC | 3 cut(s) | 349, 359, 1118 |
| TseI | GCWGC | 5 cut(s) | 576, 999, 1190, 1325, 1409 |
| Tsp45I | GTSAC | 3 cut(s) | 349, 359, 1118 |
| TspDTI | ATGAA | 6 cut(s) | 69, 128, 442, 494, 522, 764 |
| TspGWI | ACGGA | 2 cut(s) | 228, 940 |
| TspRI | CASTG | 8 cut(s) | 19, 111, 190, 283, 352, 483, 1168, 1327 |
| Tth111I | GACNNNGTC | 2 cut(s) | 185, 570 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 698, 779 |
| Vha464I | CTTAAG | 1 cut(s) | 494 |
| VpaK11BI | GGWCC | 4 cut(s) | 302, 566, 1292, 1298 |
| XapI | RAATTY | 3 cut(s) | 958, 967, 1276 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 979 |
| XmaJI | CCTAGG | 1 cut(s) | 245 |
| XspI | CTAG | 3 cut(s) | 246, 438, 1414 |