Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07810 AT3G07810 |
| fragaria_vesca | FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 |
| malus_domestica | MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1 |
| prunus_persica | Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 |
| pyrus_communis | pycom09g04550 pycom17g10350 pycom17g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871 |
| rosa_laevigata | RLG00000020945 RLG00000020948 |
| rosa_multiflora | Rmu_co8440963.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092640 Rroxscaffold_2G00092680 |
| rosa_rugosa | Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900 |
| rosa_samantha | Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700 |
| rosa_wichuraiana | Rw2G043110 Rw2G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 798 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 981 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 305, 698, 779 |
| AccI | GTMKAC | 1 cut(s) | 647 |
| AciI | CCGC | 5 cut(s) | 33, 179, 310, 1098, 1356 |
| AclWI | GGATC | 1 cut(s) | 1024 |
| AcoI | YGGCCR | 2 cut(s) | 307, 1070 |
| AcsI | RAATTY | 2 cut(s) | 997, 1312 |
| AcuI | CTGAAG | 1 cut(s) | 1062 |
| AfaI | GTAC | 1 cut(s) | 1045 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 305, 587, 659, 698, 725, 779 |
| AgsI | TTSAA | 4 cut(s) | 367, 530, 870, 1281 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AjnI | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| AluBI | AGCT | 7 cut(s) | 621, 936, 1064, 1091, 1351, 1364, 1379 |
| AluI | AGCT | 7 cut(s) | 621, 936, 1064, 1091, 1351, 1364, 1379 |
| Alw21I | GWGCWC | 1 cut(s) | 139 |
| Alw26I | GTCTC | 4 cut(s) | 427, 948, 1284, 1417 |
| AlwI | GGATC | 1 cut(s) | 1024 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 305, 698 |
| AoxI | GGCC | 5 cut(s) | 130, 228, 307, 565, 1070 |
| ApeKI | GCWGC | 3 cut(s) | 282, 1226, 1445 |
| ApoI | RAATTY | 2 cut(s) | 997, 1312 |
| AspA2I | CCTAGG | 1 cut(s) | 245 |
| AspS9I | GGNCC | 6 cut(s) | 123, 302, 566, 974, 1029, 1251 |
| AsuHPI | GGTGA | 1 cut(s) | 552 |
| AvaII | GGWCC | 5 cut(s) | 123, 302, 974, 1029, 1251 |
| AvrII | CCTAGG | 1 cut(s) | 245 |
| BaeGI | GKGCMC | 1 cut(s) | 1209 |
| BalI | TGGCCA | 1 cut(s) | 1072 |
| BanII | GRGCYC | 1 cut(s) | 773 |
| BauI | CACGAG | 1 cut(s) | 138 |
| Bbv12I | GWGCWC | 1 cut(s) | 139 |
| BbvI | GCAGC | 3 cut(s) | 294, 1213, 1432 |
| BccI | CCATC | 8 cut(s) | 206, 214, 517, 893, 974, 1081, 1241, 1319 |
| BceAI | ACGGC | 1 cut(s) | 117 |
| BciT130I | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| BciVI | GTATCC | 2 cut(s) | 40, 584 |
| BclI | TGATCA | 2 cut(s) | 108, 418 |
| BcoDI | GTCTC | 4 cut(s) | 427, 948, 1284, 1417 |
| BfaI | CTAG | 2 cut(s) | 246, 1450 |
| BfuI | GTATCC | 2 cut(s) | 40, 584 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 236 |
| BisI | GCNGC | 6 cut(s) | 34, 283, 310, 1227, 1357, 1446 |
| BlnI | CCTAGG | 1 cut(s) | 245 |
| BlsI | GCNGC | 6 cut(s) | 35, 284, 311, 1228, 1358, 1447 |
| Bme1390I | CCNGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| Bme18I | GGWCC | 5 cut(s) | 123, 302, 974, 1029, 1251 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 6 cut(s) | 123, 302, 566, 974, 1029, 1251 |
| BmiI | GGNNCC | 3 cut(s) | 568, 1030, 1252 |
| BmrFI | CCNGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| BmrI | ACTGGG | 1 cut(s) | 564 |
| BmsI | GCATC | 3 cut(s) | 294, 1223, 1238 |
| BmuI | ACTGGG | 1 cut(s) | 564 |
| BpmI | CTGGAG | 3 cut(s) | 282, 1080, 1194 |
| BpuEI | CTTGAG | 2 cut(s) | 787, 1077 |
| BsaI | GGTCTC | 2 cut(s) | 427, 1284 |
| BsaJI | CCNNGG | 4 cut(s) | 245, 289, 772, 1254 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1120, 1150 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 305, 587, 659, 698, 725, 779 |
| Bse1I | ACTGG | 4 cut(s) | 570, 692, 1063, 1177 |
| Bse3DI | GCAATG | 1 cut(s) | 1089 |
| BseBI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| BseDI | CCNNGG | 4 cut(s) | 245, 289, 772, 1254 |
| BseGI | GGATG | 4 cut(s) | 225, 256, 285, 1375 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 305, 587, 659, 698, 725, 779 |
| BseMI | GCAATG | 1 cut(s) | 1089 |
| BseMII | CTCAG | 2 cut(s) | 596, 653 |
| BseNI | ACTGG | 4 cut(s) | 570, 692, 1063, 1177 |
| BseSI | GKGCMC | 1 cut(s) | 1209 |
| BseXI | GCAGC | 3 cut(s) | 294, 1213, 1432 |
| BseYI | CCCAGC | 1 cut(s) | 169 |
| BsgI | GTGCAG | 1 cut(s) | 561 |
| BshFI | GGCC | 5 cut(s) | 132, 230, 309, 567, 1072 |
| BsiHKAI | GWGCWC | 1 cut(s) | 139 |
| BslFI | GGGAC | 3 cut(s) | 104, 403, 1042 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 305, 587, 659, 698, 725, 779 |
| BsmAI | GTCTC | 4 cut(s) | 427, 948, 1284, 1417 |
| BsmFI | GGGAC | 3 cut(s) | 104, 403, 1042 |
| BsmI | GAATGC | 1 cut(s) | 793 |
| BsnI | GGCC | 5 cut(s) | 132, 230, 309, 567, 1072 |
| Bso31I | GGTCTC | 2 cut(s) | 427, 1284 |
| Bsp1286I | GDGCHC | 3 cut(s) | 139, 773, 1209 |
| Bsp143I | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| Bsp19I | CCATGG | 1 cut(s) | 289 |
| BspACI | CCGC | 5 cut(s) | 33, 179, 310, 1098, 1356 |
| BspANI | GGCC | 5 cut(s) | 132, 230, 309, 567, 1072 |
| BspCNI | CTCAG | 2 cut(s) | 597, 652 |
| BspHI | TCATGA | 2 cut(s) | 111, 505 |
| BspLI | GGNNCC | 3 cut(s) | 568, 1030, 1252 |
| BspPI | GGATC | 1 cut(s) | 1024 |
| BspQI | GCTCTTC | 1 cut(s) | 51 |
| BspTNI | GGTCTC | 2 cut(s) | 427, 1284 |
| BsrDI | GCAATG | 1 cut(s) | 1089 |
| BsrI | ACTGG | 4 cut(s) | 570, 692, 1063, 1177 |
| BssECI | CCNNGG | 4 cut(s) | 245, 289, 772, 1254 |
| BssMI | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| BssNAI | GTATAC | 1 cut(s) | 648 |
| BssSI | CACGAG | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 3 cut(s) | 245, 289, 1254 |
| Bst1107I | GTATAC | 1 cut(s) | 648 |
| Bst2BI | CACGAG | 1 cut(s) | 138 |
| Bst2UI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| Bst4CI | ACNGT | 5 cut(s) | 349, 1157, 1163, 1193, 1428 |
| Bst6I | CTCTTC | 2 cut(s) | 51, 465 |
| BstC8I | GCNNGC | 1 cut(s) | 540 |
| BstDEI | CTNAG | 3 cut(s) | 605, 639, 1380 |
| BstDSI | CCRYGG | 1 cut(s) | 289 |
| BstF5I | GGATG | 4 cut(s) | 225, 256, 285, 1375 |
| BstKTI | GATC | 5 cut(s) | 111, 121, 421, 1019, 1307 |
| BstMAI | GTCTC | 4 cut(s) | 427, 948, 1284, 1417 |
| BstMBI | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1088 |
| BstNI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| BstSCI | CCNGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| BstSLI | GKGCMC | 1 cut(s) | 1209 |
| BstV1I | GCAGC | 3 cut(s) | 294, 1213, 1432 |
| BstZ17I | GTATAC | 1 cut(s) | 648 |
| BsuI | GTATCC | 2 cut(s) | 40, 584 |
| BsuRI | GGCC | 5 cut(s) | 132, 230, 309, 567, 1072 |
| BtgI | CCRYGG | 1 cut(s) | 289 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsCI | GGATG | 4 cut(s) | 225, 256, 285, 1375 |
| BtsI | GCAGTG | 3 cut(s) | 111, 283, 483 |
| BtsIMutI | CAGTG | 5 cut(s) | 111, 283, 345, 483, 1198 |
| Cac8I | GCNNGC | 1 cut(s) | 540 |
| CaiI | CAGNNNCTG | 2 cut(s) | 305, 698 |
| CciI | TCATGA | 2 cut(s) | 111, 505 |
| Cfr13I | GGNCC | 6 cut(s) | 123, 302, 566, 974, 1029, 1251 |
| CseI | GACGC | 3 cut(s) | 50, 175, 330 |
| Csp6I | GTAC | 1 cut(s) | 1044 |
| CviAII | CATG | 3 cut(s) | 112, 290, 506 |
| CviQI | GTAC | 1 cut(s) | 1044 |
| DdeI | CTNAG | 3 cut(s) | 605, 639, 1380 |
| DpnI | GATC | 5 cut(s) | 110, 120, 420, 1018, 1306 |
| DpnII | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 981 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 981 |
| EaeI | YGGCCR | 2 cut(s) | 307, 1070 |
| Eam1104I | CTCTTC | 2 cut(s) | 51, 465 |
| EarI | CTCTTC | 2 cut(s) | 51, 465 |
| EciI | GGCGGA | 1 cut(s) | 1113 |
| Eco130I | CCWWGG | 3 cut(s) | 245, 289, 1254 |
| Eco24I | GRGCYC | 1 cut(s) | 773 |
| Eco31I | GGTCTC | 2 cut(s) | 427, 1284 |
| Eco47I | GGWCC | 5 cut(s) | 123, 302, 974, 1029, 1251 |
| Eco57I | CTGAAG | 1 cut(s) | 1062 |
| EcoO109I | RGGNCCY | 2 cut(s) | 302, 1251 |
| EcoRII | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| EcoT14I | CCWWGG | 3 cut(s) | 245, 289, 1254 |
| EcoT38I | GRGCYC | 1 cut(s) | 773 |
| ErhI | CCWWGG | 3 cut(s) | 245, 289, 1254 |
| FaeI | CATG | 3 cut(s) | 115, 293, 509 |
| FaqI | GGGAC | 3 cut(s) | 104, 403, 1042 |
| FatI | CATG | 3 cut(s) | 111, 289, 505 |
| FbaI | TGATCA | 2 cut(s) | 108, 418 |
| FblI | GTMKAC | 1 cut(s) | 647 |
| Fnu4HI | GCNGC | 6 cut(s) | 34, 283, 310, 1227, 1357, 1446 |
| FokI | GGATG | 4 cut(s) | 232, 263, 272, 1382 |
| FriOI | GRGCYC | 1 cut(s) | 773 |
| Fsp4HI | GCNGC | 6 cut(s) | 34, 283, 310, 1227, 1357, 1446 |
| FspBI | CTAG | 2 cut(s) | 246, 1450 |
| GluI | GCNGC | 6 cut(s) | 34, 283, 310, 1227, 1357, 1446 |
| GsaI | CCCAGC | 1 cut(s) | 173 |
| GsuI | CTGGAG | 3 cut(s) | 282, 1080, 1194 |
| HaeIII | GGCC | 5 cut(s) | 132, 230, 309, 567, 1072 |
| HgaI | GACGC | 3 cut(s) | 50, 175, 330 |
| Hin1II | CATG | 3 cut(s) | 115, 293, 509 |
| HinfI | GANTC | 5 cut(s) | 450, 464, 684, 847, 1129 |
| HphI | GGTGA | 1 cut(s) | 552 |
| Hpy166II | GTNNAC | 4 cut(s) | 345, 481, 648, 974 |
| Hpy188III | TCNNGA | 4 cut(s) | 112, 367, 506, 1020 |
| Hpy8I | GTNNAC | 4 cut(s) | 345, 481, 648, 974 |
| HpyAV | CCTTC | 1 cut(s) | 210 |
| HpyCH4III | ACNGT | 5 cut(s) | 349, 1157, 1163, 1193, 1428 |
| HpyCH4IV | ACGT | 1 cut(s) | 93 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 542, 791, 1199, 1214, 1229 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1088 |
| HpyF3I | CTNAG | 3 cut(s) | 605, 639, 1380 |
| HpySE526I | ACGT | 1 cut(s) | 93 |
| Hsp92II | CATG | 3 cut(s) | 115, 293, 509 |
| Ksp22I | TGATCA | 2 cut(s) | 108, 418 |
| Kzo9I | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| LguI | GCTCTTC | 1 cut(s) | 51 |
| LmnI | GCTCC | 1 cut(s) | 1061 |
| Lsp1109I | GCAGC | 3 cut(s) | 294, 1213, 1432 |
| LweI | GCATC | 3 cut(s) | 294, 1223, 1238 |
| MaeI | CTAG | 2 cut(s) | 246, 1450 |
| MaeII | ACGT | 1 cut(s) | 93 |
| MaeIII | GTNAC | 3 cut(s) | 349, 359, 1157 |
| MalI | GATC | 5 cut(s) | 110, 120, 420, 1018, 1306 |
| MboI | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| MboII | GAAGA | 7 cut(s) | 68, 482, 532, 915, 1068, 1197, 1209 |
| MhlI | GDGCHC | 3 cut(s) | 139, 773, 1209 |
| MlsI | TGGCCA | 1 cut(s) | 1072 |
| MluNI | TGGCCA | 1 cut(s) | 1072 |
| MlyI | GAGTC | 2 cut(s) | 856, 1138 |
| MmeI | TCCRAC | 1 cut(s) | 310 |
| Mox20I | TGGCCA | 1 cut(s) | 1072 |
| MscI | TGGCCA | 1 cut(s) | 1072 |
| MseI | TTAA | 4 cut(s) | 495, 627, 987, 1416 |
| Msp20I | TGGCCA | 1 cut(s) | 1072 |
| MspR9I | CCNGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| Mva1269I | GAATGC | 1 cut(s) | 793 |
| MvaI | CCWGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 236, 282, 1088 |
| NcoI | CCATGG | 1 cut(s) | 289 |
| NdeII | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| NlaIII | CATG | 3 cut(s) | 115, 293, 509 |
| NlaIV | GGNNCC | 3 cut(s) | 568, 1030, 1252 |
| NmuCI | GTSAC | 2 cut(s) | 349, 359 |
| PagI | TCATGA | 2 cut(s) | 111, 505 |
| PciSI | GCTCTTC | 1 cut(s) | 51 |
| PctI | GAATGC | 1 cut(s) | 793 |
| PfeI | GAWTC | 3 cut(s) | 450, 464, 684 |
| PflFI | GACNNNGTC | 1 cut(s) | 185 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 305, 698, 779 |
| PkrI | GCNGC | 6 cut(s) | 35, 284, 311, 1228, 1358, 1447 |
| PleI | GAGTC | 2 cut(s) | 855, 1137 |
| PpsI | GAGTC | 2 cut(s) | 855, 1137 |
| PpuMI | RGGWCCY | 2 cut(s) | 302, 1251 |
| PsiI | TTATAA | 1 cut(s) | 798 |
| Psp5II | RGGWCCY | 2 cut(s) | 302, 1251 |
| Psp6I | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| PspFI | CCCAGC | 1 cut(s) | 169 |
| PspGI | CCWGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| PspN4I | GGNNCC | 3 cut(s) | 568, 1030, 1252 |
| PspPI | GGNCC | 6 cut(s) | 123, 302, 566, 974, 1029, 1251 |
| PspPPI | RGGWCCY | 2 cut(s) | 302, 1251 |
| PstNI | CAGNNNCTG | 2 cut(s) | 305, 698 |
| PsyI | GACNNNGTC | 1 cut(s) | 185 |
| RsaI | GTAC | 1 cut(s) | 1045 |
| RsaNI | GTAC | 1 cut(s) | 1044 |
| SapI | GCTCTTC | 1 cut(s) | 51 |
| SaqAI | TTAA | 4 cut(s) | 495, 627, 987, 1416 |
| SatI | GCNGC | 6 cut(s) | 34, 283, 310, 1227, 1357, 1446 |
| Sau3AI | GATC | 5 cut(s) | 108, 118, 418, 1016, 1304 |
| Sau96I | GGNCC | 6 cut(s) | 123, 302, 566, 974, 1029, 1251 |
| SchI | GAGTC | 2 cut(s) | 856, 1138 |
| ScrFI | CCNGG | 6 cut(s) | 300, 306, 564, 762, 774, 1392 |
| SduI | GDGCHC | 3 cut(s) | 139, 773, 1209 |
| SfaNI | GCATC | 3 cut(s) | 294, 1223, 1238 |
| SinI | GGWCC | 5 cut(s) | 123, 302, 974, 1029, 1251 |
| SmlI | CTYRAG | 2 cut(s) | 766, 1092 |
| SmoI | CTYRAG | 2 cut(s) | 766, 1092 |
| SsiI | CCGC | 5 cut(s) | 33, 179, 310, 1098, 1356 |
| SspMI | CTAG | 2 cut(s) | 246, 1450 |
| StyD4I | CCNGG | 6 cut(s) | 298, 304, 562, 760, 772, 1390 |
| StyI | CCWWGG | 3 cut(s) | 245, 289, 1254 |
| TaaI | ACNGT | 5 cut(s) | 349, 1157, 1163, 1193, 1428 |
| TaiI | ACGT | 1 cut(s) | 96 |
| TaqI | TCGA | 1 cut(s) | 1245 |
| TatI | WGTACW | 1 cut(s) | 1043 |
| TauI | GCSGC | 3 cut(s) | 36, 312, 1359 |
| TfiI | GAWTC | 3 cut(s) | 450, 464, 684 |
| Tru1I | TTAA | 4 cut(s) | 495, 627, 987, 1416 |
| Tru9I | TTAA | 4 cut(s) | 495, 627, 987, 1416 |
| TscAI | CASTG | 5 cut(s) | 111, 283, 352, 483, 1198 |
| TseFI | GTSAC | 2 cut(s) | 349, 359 |
| TseI | GCWGC | 3 cut(s) | 282, 1226, 1445 |
| Tsp45I | GTSAC | 2 cut(s) | 349, 359 |
| TspDTI | ATGAA | 8 cut(s) | 69, 128, 442, 494, 522, 764, 839, 1209 |
| TspRI | CASTG | 5 cut(s) | 111, 283, 352, 483, 1198 |
| Tth111I | GACNNNGTC | 1 cut(s) | 185 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 305, 698, 779 |
| VpaK11BI | GGWCC | 5 cut(s) | 123, 302, 974, 1029, 1251 |
| XapI | RAATTY | 2 cut(s) | 997, 1312 |
| XmaJI | CCTAGG | 1 cut(s) | 245 |
| XmiI | GTMKAC | 1 cut(s) | 647 |
| XspI | CTAG | 2 cut(s) | 246, 1450 |