Heterogeneous nuclear ribonucleoprotein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07810 AT3G07810 |
| fragaria_vesca | FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 |
| malus_domestica | MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1 |
| prunus_persica | Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 |
| pyrus_communis | pycom09g04550 pycom17g10350 pycom17g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871 |
| rosa_laevigata | RLG00000020945 RLG00000020948 |
| rosa_multiflora | Rmu_co8440963.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092640 Rroxscaffold_2G00092680 |
| rosa_rugosa | Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900 |
| rosa_samantha | Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700 |
| rosa_wichuraiana | Rw2G043110 Rw2G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1098 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 605, 998, 1079 |
| AccI | GTMKAC | 1 cut(s) | 143 |
| AciI | CCGC | 6 cut(s) | 126, 171, 479, 610, 842, 1395 |
| AclWI | GGATC | 3 cut(s) | 426, 1556, 1569 |
| AcoI | YGGCCR | 1 cut(s) | 607 |
| AcsI | RAATTY | 4 cut(s) | 1051, 1258, 1267, 1582 |
| AfaI | GTAC | 4 cut(s) | 382, 674, 958, 1468 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 154, 605, 887, 998, 1025, 1079, 1224, 1367 |
| AgsI | TTSAA | 7 cut(s) | 14, 667, 680, 830, 1069, 1152, 1528 |
| AjnI | CCWGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| AluBI | AGCT | 4 cut(s) | 921, 1113, 1215, 1634 |
| AluI | AGCT | 4 cut(s) | 921, 1113, 1215, 1634 |
| Alw21I | GWGCWC | 2 cut(s) | 27, 439 |
| Alw26I | GTCTC | 3 cut(s) | 9, 24, 1687 |
| AlwI | GGATC | 3 cut(s) | 426, 1556, 1569 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 605, 998, 1637 |
| AoxI | GGCC | 7 cut(s) | 73, 230, 430, 607, 734, 1477, 1598 |
| ApeKI | GCWGC | 4 cut(s) | 42, 876, 1631, 1715 |
| ApoI | RAATTY | 4 cut(s) | 1051, 1258, 1267, 1582 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1213, 1245 |
| AspA2I | CCTAGG | 2 cut(s) | 545, 737 |
| AsuHPI | GGTGA | 5 cut(s) | 73, 671, 852, 1350, 1430 |
| AsuNHI | GCTAGC | 1 cut(s) | 167 |
| AvaII | GGWCC | 7 cut(s) | 184, 280, 423, 602, 866, 1299, 1604 |
| AvrII | CCTAGG | 2 cut(s) | 545, 737 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1458, 1491 |
| BanII | GRGCYC | 1 cut(s) | 1133 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1618, 1650 |
| BauI | CACGAG | 1 cut(s) | 438 |
| BbsI | GAAGAC | 4 cut(s) | 56, 183, 1338, 1479 |
| Bbv12I | GWGCWC | 2 cut(s) | 27, 439 |
| BbvI | GCAGC | 4 cut(s) | 29, 888, 1643, 1702 |
| BccI | CCATC | 6 cut(s) | 208, 514, 817, 1175, 1511, 1589 |
| BceAI | ACGGC | 1 cut(s) | 417 |
| BciT130I | CCWGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| BciVI | GTATCC | 1 cut(s) | 475 |
| BclI | TGATCA | 2 cut(s) | 408, 718 |
| BcoDI | GTCTC | 3 cut(s) | 9, 24, 1687 |
| BfaI | CTAG | 5 cut(s) | 168, 204, 546, 738, 1720 |
| BfuI | GTATCC | 1 cut(s) | 475 |
| BisI | GCNGC | 6 cut(s) | 43, 172, 610, 877, 1632, 1716 |
| BlnI | CCTAGG | 2 cut(s) | 545, 737 |
| BlsI | GCNGC | 6 cut(s) | 44, 173, 611, 878, 1633, 1717 |
| BmcAI | AGTACT | 2 cut(s) | 382, 674 |
| Bme1390I | CCNGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| Bme18I | GGWCC | 7 cut(s) | 184, 280, 423, 602, 866, 1299, 1604 |
| BmiI | GGNNCC | 7 cut(s) | 281, 846, 868, 1300, 1414, 1522, 1606 |
| BmrFI | CCNGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| BmrI | ACTGGG | 2 cut(s) | 864, 1338 |
| BmsI | GCATC | 4 cut(s) | 154, 267, 594, 650 |
| BmtI | GCTAGC | 1 cut(s) | 171 |
| BmuI | ACTGGG | 2 cut(s) | 864, 1338 |
| BpiI | GAAGAC | 4 cut(s) | 56, 183, 1338, 1479 |
| BpmI | CTGGAG | 3 cut(s) | 92, 582, 1360 |
| BpuEI | CTTGAG | 3 cut(s) | 74, 779, 1347 |
| BsaAI | YACGTR | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 4 cut(s) | 545, 589, 737, 1072 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 154, 605, 887, 998, 1025, 1079, 1224, 1367 |
| Bse118I | RCCGGY | 1 cut(s) | 1415 |
| Bse1I | ACTGG | 5 cut(s) | 283, 870, 992, 1333, 1343 |
| BseBI | CCWGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| BseDI | CCNNGG | 4 cut(s) | 545, 589, 737, 1072 |
| BseGI | GGATG | 6 cut(s) | 219, 525, 556, 585, 641, 1202 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 154, 605, 887, 998, 1025, 1079, 1224, 1367 |
| BseMII | CTCAG | 5 cut(s) | 189, 206, 780, 896, 953 |
| BseNI | ACTGG | 5 cut(s) | 283, 870, 992, 1333, 1343 |
| BseRI | GAGGAG | 2 cut(s) | 68, 785 |
| BseXI | GCAGC | 4 cut(s) | 29, 888, 1643, 1702 |
| BsgI | GTGCAG | 1 cut(s) | 1650 |
| BshFI | GGCC | 7 cut(s) | 75, 232, 432, 609, 736, 1479, 1600 |
| BsiHKAI | GWGCWC | 2 cut(s) | 27, 439 |
| BsiSI | CCGG | 1 cut(s) | 1416 |
| BslFI | GGGAC | 5 cut(s) | 359, 527, 703, 1152, 1312 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 154, 605, 887, 998, 1025, 1079, 1224, 1367 |
| BsmAI | GTCTC | 3 cut(s) | 9, 24, 1687 |
| BsmBI | CGTCTC | 1 cut(s) | 24 |
| BsmFI | GGGAC | 5 cut(s) | 359, 527, 703, 1152, 1312 |
| BsnI | GGCC | 7 cut(s) | 75, 232, 432, 609, 736, 1479, 1600 |
| Bsp1286I | GDGCHC | 3 cut(s) | 27, 439, 1133 |
| Bsp143I | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| BspACI | CCGC | 6 cut(s) | 126, 171, 479, 610, 842, 1395 |
| BspANI | GGCC | 7 cut(s) | 75, 232, 432, 609, 736, 1479, 1600 |
| BspCNI | CTCAG | 5 cut(s) | 190, 205, 779, 897, 952 |
| BspHI | TCATGA | 2 cut(s) | 411, 805 |
| BspLI | GGNNCC | 7 cut(s) | 281, 846, 868, 1300, 1414, 1522, 1606 |
| BspOI | GCTAGC | 1 cut(s) | 171 |
| BspPI | GGATC | 3 cut(s) | 426, 1556, 1569 |
| BspQI | GCTCTTC | 1 cut(s) | 351 |
| BsrFI | RCCGGY | 1 cut(s) | 1415 |
| BsrI | ACTGG | 5 cut(s) | 283, 870, 992, 1333, 1343 |
| BssAI | RCCGGY | 1 cut(s) | 1415 |
| BssECI | CCNNGG | 4 cut(s) | 545, 589, 737, 1072 |
| BssMI | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| BssSI | CACGAG | 1 cut(s) | 438 |
| BssT1I | CCWWGG | 3 cut(s) | 545, 589, 737 |
| Bst2BI | CACGAG | 1 cut(s) | 438 |
| Bst2UI | CCWGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| Bst4CI | ACNGT | 8 cut(s) | 475, 487, 649, 684, 961, 1463, 1541, 1698 |
| Bst6I | CTCTTC | 1 cut(s) | 351 |
| BstBAI | YACGTR | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 3 cut(s) | 169, 583, 840 |
| BstDEI | CTNAG | 6 cut(s) | 192, 198, 248, 766, 905, 939 |
| BstF5I | GGATG | 6 cut(s) | 219, 525, 556, 585, 641, 1202 |
| BstKTI | GATC | 6 cut(s) | 294, 411, 421, 721, 1564, 1577 |
| BstMAI | GTCTC | 3 cut(s) | 9, 24, 1687 |
| BstMBI | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 536, 582, 1320, 1597 |
| BstNI | CCWGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| BstSCI | CCNGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| BstV1I | GCAGC | 4 cut(s) | 29, 888, 1643, 1702 |
| BstV2I | GAAGAC | 4 cut(s) | 56, 183, 1338, 1479 |
| BstX2I | RGATCY | 1 cut(s) | 1561 |
| BstYI | RGATCY | 1 cut(s) | 1561 |
| BsuI | GTATCC | 1 cut(s) | 475 |
| BsuRI | GGCC | 7 cut(s) | 75, 232, 432, 609, 736, 1479, 1600 |
| BtsCI | GGATG | 6 cut(s) | 219, 525, 556, 585, 641, 1202 |
| BtsI | GCAGTG | 3 cut(s) | 411, 583, 783 |
| BtsIMutI | CAGTG | 5 cut(s) | 411, 583, 645, 783, 1468 |
| Cac8I | GCNNGC | 3 cut(s) | 169, 583, 840 |
| CaiI | CAGNNNCTG | 3 cut(s) | 605, 998, 1637 |
| CciI | TCATGA | 2 cut(s) | 411, 805 |
| Cfr10I | RCCGGY | 1 cut(s) | 1415 |
| CseI | GACGC | 2 cut(s) | 350, 1473 |
| Csp6I | GTAC | 4 cut(s) | 381, 673, 957, 1467 |
| CviAII | CATG | 6 cut(s) | 137, 181, 236, 412, 806, 1282 |
| CviQI | GTAC | 4 cut(s) | 381, 673, 957, 1467 |
| DdeI | CTNAG | 6 cut(s) | 192, 198, 248, 766, 905, 939 |
| DpnI | GATC | 6 cut(s) | 293, 410, 420, 720, 1563, 1576 |
| DpnII | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| EaeI | YGGCCR | 1 cut(s) | 607 |
| Eam1104I | CTCTTC | 1 cut(s) | 351 |
| EarI | CTCTTC | 1 cut(s) | 351 |
| Eco130I | CCWWGG | 3 cut(s) | 545, 589, 737 |
| Eco147I | AGGCCT | 1 cut(s) | 736 |
| Eco24I | GRGCYC | 1 cut(s) | 1133 |
| Eco47I | GGWCC | 7 cut(s) | 184, 280, 423, 602, 866, 1299, 1604 |
| EcoO109I | RGGNCCY | 2 cut(s) | 602, 1478 |
| EcoRII | CCWGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| EcoT14I | CCWWGG | 3 cut(s) | 545, 589, 737 |
| EcoT38I | GRGCYC | 1 cut(s) | 1133 |
| ErhI | CCWWGG | 3 cut(s) | 545, 589, 737 |
| Esp3I | CGTCTC | 1 cut(s) | 24 |
| FaeI | CATG | 6 cut(s) | 140, 184, 239, 415, 809, 1285 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 659, 691 |
| FaqI | GGGAC | 5 cut(s) | 359, 527, 703, 1152, 1312 |
| FatI | CATG | 6 cut(s) | 136, 180, 235, 411, 805, 1281 |
| FauI | CCCGC | 1 cut(s) | 1388 |
| FbaI | TGATCA | 2 cut(s) | 408, 718 |
| FblI | GTMKAC | 1 cut(s) | 143 |
| Fnu4HI | GCNGC | 6 cut(s) | 43, 172, 610, 877, 1632, 1716 |
| FokI | GGATG | 6 cut(s) | 226, 532, 563, 572, 628, 1189 |
| FriOI | GRGCYC | 1 cut(s) | 1133 |
| Fsp4HI | GCNGC | 6 cut(s) | 43, 172, 610, 877, 1632, 1716 |
| FspBI | CTAG | 5 cut(s) | 168, 204, 546, 738, 1720 |
| GluI | GCNGC | 6 cut(s) | 43, 172, 610, 877, 1632, 1716 |
| GsuI | CTGGAG | 3 cut(s) | 92, 582, 1360 |
| HaeIII | GGCC | 7 cut(s) | 75, 232, 432, 609, 736, 1479, 1600 |
| HapII | CCGG | 1 cut(s) | 1416 |
| HgaI | GACGC | 2 cut(s) | 350, 1473 |
| Hin1II | CATG | 6 cut(s) | 140, 184, 239, 415, 809, 1285 |
| HincII | GTYRAC | 2 cut(s) | 916, 1336 |
| HindII | GTYRAC | 2 cut(s) | 916, 1336 |
| HinfI | GANTC | 5 cut(s) | 133, 750, 764, 1222, 1399 |
| HpaI | GTTAAC | 1 cut(s) | 1336 |
| HpaII | CCGG | 1 cut(s) | 1416 |
| HphI | GGTGA | 5 cut(s) | 73, 671, 852, 1350, 1430 |
| Hpy166II | GTNNAC | 4 cut(s) | 120, 144, 916, 1336 |
| Hpy188III | TCNNGA | 7 cut(s) | 53, 295, 412, 667, 796, 806, 1290 |
| Hpy8I | GTNNAC | 4 cut(s) | 120, 144, 916, 1336 |
| HpyAV | CCTTC | 5 cut(s) | 197, 409, 510, 1449, 1534 |
| HpyCH4III | ACNGT | 8 cut(s) | 475, 487, 649, 684, 961, 1463, 1541, 1698 |
| HpyCH4IV | ACGT | 2 cut(s) | 116, 1641 |
| HpyCH4V | TGCA | 4 cut(s) | 304, 1091, 1265, 1631 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 536, 582, 1320, 1597 |
| HpyF3I | CTNAG | 6 cut(s) | 192, 198, 248, 766, 905, 939 |
| HpySE526I | ACGT | 2 cut(s) | 116, 1641 |
| Hsp92II | CATG | 6 cut(s) | 140, 184, 239, 415, 809, 1285 |
| Ksp22I | TGATCA | 2 cut(s) | 408, 718 |
| KspAI | GTTAAC | 1 cut(s) | 1336 |
| Kzo9I | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| LguI | GCTCTTC | 1 cut(s) | 351 |
| LmnI | GCTCC | 3 cut(s) | 1220, 1412, 1520 |
| Lsp1109I | GCAGC | 4 cut(s) | 29, 888, 1643, 1702 |
| LweI | GCATC | 4 cut(s) | 154, 267, 594, 650 |
| MaeI | CTAG | 5 cut(s) | 168, 204, 546, 738, 1720 |
| MaeII | ACGT | 2 cut(s) | 116, 1641 |
| MaeIII | GTNAC | 3 cut(s) | 649, 659, 1219 |
| MalI | GATC | 6 cut(s) | 293, 410, 420, 720, 1563, 1576 |
| MboI | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| MboII | GAAGA | 7 cut(s) | 56, 188, 368, 631, 832, 1338, 1479 |
| MflI | RGATCY | 1 cut(s) | 1561 |
| MhlI | GDGCHC | 3 cut(s) | 27, 439, 1133 |
| MlyI | GAGTC | 3 cut(s) | 142, 758, 1216 |
| MmeI | TCCRAC | 2 cut(s) | 610, 943 |
| MseI | TTAA | 6 cut(s) | 273, 927, 1251, 1335, 1494, 1686 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 1416 |
| MspR9I | CCNGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| MvaI | CCWGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 536, 582, 1320, 1597 |
| NdeII | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| NheI | GCTAGC | 1 cut(s) | 167 |
| NlaIII | CATG | 6 cut(s) | 140, 184, 239, 415, 809, 1285 |
| NlaIV | GGNNCC | 7 cut(s) | 281, 846, 868, 1300, 1414, 1522, 1606 |
| NmeAIII | GCCGAG | 2 cut(s) | 46, 51 |
| NmuCI | GTSAC | 3 cut(s) | 649, 659, 1219 |
| PagI | TCATGA | 2 cut(s) | 411, 805 |
| PceI | AGGCCT | 1 cut(s) | 736 |
| PciSI | GCTCTTC | 1 cut(s) | 351 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 46 |
| PfeI | GAWTC | 2 cut(s) | 750, 1399 |
| PflFI | GACNNNGTC | 1 cut(s) | 870 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 605, 998, 1079 |
| PkrI | GCNGC | 6 cut(s) | 44, 173, 611, 878, 1633, 1717 |
| PleI | GAGTC | 3 cut(s) | 141, 758, 1216 |
| PpsI | GAGTC | 3 cut(s) | 141, 758, 1216 |
| Ppu21I | YACGTR | 1 cut(s) | 117 |
| PpuMI | RGGWCCY | 1 cut(s) | 602 |
| PsiI | TTATAA | 1 cut(s) | 1098 |
| Psp5II | RGGWCCY | 1 cut(s) | 602 |
| Psp6I | CCWGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| PspGI | CCWGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| PspN4I | GGNNCC | 7 cut(s) | 281, 846, 868, 1300, 1414, 1522, 1606 |
| PspPPI | RGGWCCY | 1 cut(s) | 602 |
| PstNI | CAGNNNCTG | 3 cut(s) | 605, 998, 1637 |
| PsuI | RGATCY | 1 cut(s) | 1561 |
| PsyI | GACNNNGTC | 1 cut(s) | 870 |
| RsaI | GTAC | 4 cut(s) | 382, 674, 958, 1468 |
| RsaNI | GTAC | 4 cut(s) | 381, 673, 957, 1467 |
| SapI | GCTCTTC | 1 cut(s) | 351 |
| SaqAI | TTAA | 6 cut(s) | 273, 927, 1251, 1335, 1494, 1686 |
| SatI | GCNGC | 6 cut(s) | 43, 172, 610, 877, 1632, 1716 |
| Sau3AI | GATC | 6 cut(s) | 291, 408, 418, 718, 1561, 1574 |
| ScaI | AGTACT | 2 cut(s) | 382, 674 |
| SchI | GAGTC | 3 cut(s) | 142, 758, 1216 |
| ScrFI | CCNGG | 7 cut(s) | 600, 606, 864, 1062, 1074, 1602, 1662 |
| SduI | GDGCHC | 3 cut(s) | 27, 439, 1133 |
| SfaNI | GCATC | 4 cut(s) | 154, 267, 594, 650 |
| SinI | GGWCC | 7 cut(s) | 184, 280, 423, 602, 866, 1299, 1604 |
| SmlI | CTYRAG | 3 cut(s) | 53, 794, 1362 |
| SmoI | CTYRAG | 3 cut(s) | 53, 794, 1362 |
| SseBI | AGGCCT | 1 cut(s) | 736 |
| SsiI | CCGC | 6 cut(s) | 126, 171, 479, 610, 842, 1395 |
| SspMI | CTAG | 5 cut(s) | 168, 204, 546, 738, 1720 |
| StuI | AGGCCT | 1 cut(s) | 736 |
| StyD4I | CCNGG | 7 cut(s) | 598, 604, 862, 1060, 1072, 1600, 1660 |
| StyI | CCWWGG | 3 cut(s) | 545, 589, 737 |
| TaaI | ACNGT | 8 cut(s) | 475, 487, 649, 684, 961, 1463, 1541, 1698 |
| TaiI | ACGT | 2 cut(s) | 119, 1644 |
| TaqI | TCGA | 4 cut(s) | 150, 294, 1006, 1271 |
| TatI | WGTACW | 3 cut(s) | 380, 672, 956 |
| TauI | GCSGC | 2 cut(s) | 174, 612 |
| TfiI | GAWTC | 2 cut(s) | 750, 1399 |
| Tru1I | TTAA | 6 cut(s) | 273, 927, 1251, 1335, 1494, 1686 |
| Tru9I | TTAA | 6 cut(s) | 273, 927, 1251, 1335, 1494, 1686 |
| TscAI | CASTG | 5 cut(s) | 411, 583, 652, 783, 1468 |
| TseFI | GTSAC | 3 cut(s) | 649, 659, 1219 |
| TseI | GCWGC | 4 cut(s) | 42, 876, 1631, 1715 |
| Tsp45I | GTSAC | 3 cut(s) | 649, 659, 1219 |
| TspGWI | ACGGA | 2 cut(s) | 528, 1207 |
| TspRI | CASTG | 5 cut(s) | 411, 583, 652, 783, 1468 |
| Tth111I | GACNNNGTC | 1 cut(s) | 870 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 605, 998, 1079 |
| VpaK11BI | GGWCC | 7 cut(s) | 184, 280, 423, 602, 866, 1299, 1604 |
| XapI | RAATTY | 4 cut(s) | 1051, 1258, 1267, 1582 |
| XmaJI | CCTAGG | 2 cut(s) | 545, 737 |
| XmiI | GTMKAC | 1 cut(s) | 143 |
| XspI | CTAG | 5 cut(s) | 168, 204, 546, 738, 1720 |
| ZrmI | AGTACT | 2 cut(s) | 382, 674 |