Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07810 AT3G07810 |
| fragaria_vesca | FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 |
| malus_domestica | MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1 |
| prunus_persica | Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 |
| pyrus_communis | pycom09g04550 pycom17g10350 pycom17g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871 |
| rosa_laevigata | RLG00000020945 RLG00000020948 |
| rosa_multiflora | Rmu_co8440963.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092640 Rroxscaffold_2G00092680 |
| rosa_rugosa | Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900 |
| rosa_samantha | Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700 |
| rosa_wichuraiana | Rw2G043110 Rw2G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 839, 920 |
| AclWI | GGATC | 2 cut(s) | 267, 1400 |
| AcsI | RAATTY | 6 cut(s) | 127, 934, 1069, 1099, 1108, 1426 |
| AcuI | CTGAAG | 1 cut(s) | 1176 |
| AfaI | GTAC | 4 cut(s) | 515, 799, 1159, 1400 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 446, 728, 839, 866, 920, 1211, 1550 |
| AgsI | TTSAA | 6 cut(s) | 51, 89, 132, 508, 521, 993 |
| AjiI | CACGTC | 1 cut(s) | 275 |
| AjnI | CCWGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| AluBI | AGCT | 8 cut(s) | 762, 954, 1041, 1056, 1121, 1259, 1478, 1493 |
| AluI | AGCT | 8 cut(s) | 762, 954, 1041, 1056, 1121, 1259, 1478, 1493 |
| Alw21I | GWGCWC | 1 cut(s) | 280 |
| Alw26I | GTCTC | 3 cut(s) | 209, 1231, 1531 |
| AlwI | GGATC | 2 cut(s) | 267, 1400 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 326, 839, 1481 |
| AoxI | GGCC | 3 cut(s) | 575, 1321, 1447 |
| ApaI | GGGCCC | 1 cut(s) | 1325 |
| ApeKI | GCWGC | 6 cut(s) | 423, 717, 1118, 1340, 1475, 1559 |
| ApoI | RAATTY | 6 cut(s) | 127, 934, 1069, 1099, 1108, 1426 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1054, 1086 |
| AspS9I | GGNCC | 6 cut(s) | 264, 443, 707, 1321, 1322, 1448 |
| AsuHPI | GGTGA | 4 cut(s) | 562, 693, 1194, 1274 |
| AvaII | GGWCC | 3 cut(s) | 264, 443, 707 |
| BaeGI | GKGCMC | 1 cut(s) | 1325 |
| BanII | GRGCYC | 4 cut(s) | 914, 974, 1325, 1367 |
| BauI | CACGAG | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 37 |
| Bbv12I | GWGCWC | 1 cut(s) | 280 |
| BbvI | GCAGC | 6 cut(s) | 435, 729, 1130, 1327, 1487, 1546 |
| BccI | CCATC | 4 cut(s) | 347, 658, 1016, 1433 |
| BciT130I | CCWGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| BciVI | GTATCC | 1 cut(s) | 725 |
| BclI | TGATCA | 2 cut(s) | 249, 559 |
| BcoDI | GTCTC | 3 cut(s) | 209, 1231, 1531 |
| BfaI | CTAG | 1 cut(s) | 1564 |
| BfmI | CTRYAG | 1 cut(s) | 1381 |
| BfuI | GTATCC | 1 cut(s) | 725 |
| BglII | AGATCT | 1 cut(s) | 73 |
| BisI | GCNGC | 6 cut(s) | 424, 718, 1119, 1341, 1476, 1560 |
| BlsI | GCNGC | 6 cut(s) | 425, 719, 1120, 1342, 1477, 1561 |
| BmcAI | AGTACT | 1 cut(s) | 515 |
| Bme1390I | CCNGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| Bme18I | GGWCC | 3 cut(s) | 264, 443, 707 |
| BmgBI | CACGTC | 1 cut(s) | 275 |
| BmgT120I | GGNCC | 6 cut(s) | 264, 443, 707, 1321, 1322, 1448 |
| BmiI | GGNNCC | 5 cut(s) | 709, 1285, 1323, 1366, 1450 |
| BmrFI | CCNGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| BmrI | ACTGGG | 1 cut(s) | 705 |
| BmsI | GCATC | 4 cut(s) | 107, 435, 491, 1352 |
| BmuI | ACTGGG | 1 cut(s) | 705 |
| BpiI | GAAGAC | 1 cut(s) | 37 |
| BpmI | CTGGAG | 2 cut(s) | 423, 1194 |
| BpuEI | CTTGAG | 1 cut(s) | 1191 |
| BsaJI | CCNNGG | 4 cut(s) | 386, 387, 430, 902 |
| BsaWI | WCCGGW | 1 cut(s) | 1286 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 446, 728, 839, 866, 920, 1211, 1550 |
| Bse1I | ACTGG | 4 cut(s) | 711, 775, 833, 1113 |
| Bse3DI | GCAATG | 2 cut(s) | 19, 1174 |
| BseBI | CCWGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| BseDI | CCNNGG | 4 cut(s) | 386, 387, 430, 902 |
| BseGI | GGATG | 3 cut(s) | 397, 426, 1043 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 446, 728, 839, 866, 920, 1211, 1550 |
| BseMI | GCAATG | 2 cut(s) | 19, 1174 |
| BseMII | CTCAG | 4 cut(s) | 84, 737, 794, 1071 |
| BseNI | ACTGG | 4 cut(s) | 711, 775, 833, 1113 |
| BseRI | GAGGAG | 1 cut(s) | 56 |
| BseSI | GKGCMC | 1 cut(s) | 1325 |
| BseXI | GCAGC | 6 cut(s) | 435, 729, 1130, 1327, 1487, 1546 |
| BseYI | CCCAGC | 1 cut(s) | 310 |
| BsgI | GTGCAG | 3 cut(s) | 702, 1137, 1494 |
| BshFI | GGCC | 3 cut(s) | 577, 1323, 1449 |
| BsiHKAI | GWGCWC | 1 cut(s) | 280 |
| BsiSI | CCGG | 1 cut(s) | 1287 |
| BslFI | GGGAC | 4 cut(s) | 200, 544, 693, 1255 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 446, 728, 839, 866, 920, 1211, 1550 |
| BsmAI | GTCTC | 3 cut(s) | 209, 1231, 1531 |
| BsmBI | CGTCTC | 1 cut(s) | 209 |
| BsmFI | GGGAC | 4 cut(s) | 200, 544, 693, 1255 |
| BsnI | GGCC | 3 cut(s) | 577, 1323, 1449 |
| Bsp120I | GGGCCC | 1 cut(s) | 1321 |
| Bsp1286I | GDGCHC | 5 cut(s) | 280, 914, 974, 1325, 1367 |
| Bsp143I | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| Bsp19I | CCATGG | 1 cut(s) | 430 |
| BspANI | GGCC | 3 cut(s) | 577, 1323, 1449 |
| BspCNI | CTCAG | 4 cut(s) | 83, 738, 793, 1070 |
| BspHI | TCATGA | 2 cut(s) | 252, 646 |
| BspLI | GGNNCC | 5 cut(s) | 709, 1285, 1323, 1366, 1450 |
| BspPI | GGATC | 2 cut(s) | 267, 1400 |
| BspQI | GCTCTTC | 1 cut(s) | 192 |
| BsrDI | GCAATG | 2 cut(s) | 19, 1174 |
| BsrI | ACTGG | 4 cut(s) | 711, 775, 833, 1113 |
| BssECI | CCNNGG | 4 cut(s) | 386, 387, 430, 902 |
| BssMI | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| BssSI | CACGAG | 1 cut(s) | 279 |
| BssT1I | CCWWGG | 1 cut(s) | 430 |
| Bst2BI | CACGAG | 1 cut(s) | 279 |
| Bst2UI | CCWGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| Bst6I | CTCTTC | 1 cut(s) | 192 |
| BstC8I | GCNNGC | 1 cut(s) | 681 |
| BstDEI | CTNAG | 4 cut(s) | 70, 746, 780, 1057 |
| BstDSI | CCRYGG | 1 cut(s) | 430 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 726 |
| BstF5I | GGATG | 3 cut(s) | 397, 426, 1043 |
| BstKTI | GATC | 6 cut(s) | 76, 252, 262, 562, 1408, 1421 |
| BstMAI | GTCTC | 3 cut(s) | 209, 1231, 1531 |
| BstMBI | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 311, 377 |
| BstNI | CCWGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| BstSCI | CCNGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| BstSFI | CTRYAG | 1 cut(s) | 1381 |
| BstSLI | GKGCMC | 1 cut(s) | 1325 |
| BstV1I | GCAGC | 6 cut(s) | 435, 729, 1130, 1327, 1487, 1546 |
| BstV2I | GAAGAC | 1 cut(s) | 37 |
| BstX2I | RGATCY | 2 cut(s) | 73, 1405 |
| BstYI | RGATCY | 2 cut(s) | 73, 1405 |
| BsuI | GTATCC | 1 cut(s) | 725 |
| BsuRI | GGCC | 3 cut(s) | 577, 1323, 1449 |
| BtgI | CCRYGG | 1 cut(s) | 430 |
| BtrI | CACGTC | 1 cut(s) | 275 |
| BtsCI | GGATG | 3 cut(s) | 397, 426, 1043 |
| BtsI | GCAGTG | 3 cut(s) | 252, 624, 1477 |
| Cac8I | GCNNGC | 1 cut(s) | 681 |
| CaiI | CAGNNNCTG | 3 cut(s) | 326, 839, 1481 |
| CciI | TCATGA | 2 cut(s) | 252, 646 |
| Cfr13I | GGNCC | 6 cut(s) | 264, 443, 707, 1321, 1322, 1448 |
| CseI | GACGC | 2 cut(s) | 191, 459 |
| CsiI | ACCWGGT | 1 cut(s) | 703 |
| Csp6I | GTAC | 4 cut(s) | 514, 798, 1158, 1399 |
| CviAII | CATG | 4 cut(s) | 253, 431, 647, 1126 |
| CviQI | GTAC | 4 cut(s) | 514, 798, 1158, 1399 |
| DdeI | CTNAG | 4 cut(s) | 70, 746, 780, 1057 |
| DpnI | GATC | 6 cut(s) | 75, 251, 261, 561, 1407, 1420 |
| DpnII | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| Eam1104I | CTCTTC | 1 cut(s) | 192 |
| EarI | CTCTTC | 1 cut(s) | 192 |
| Eco130I | CCWWGG | 1 cut(s) | 430 |
| Eco24I | GRGCYC | 4 cut(s) | 914, 974, 1325, 1367 |
| Eco47I | GGWCC | 3 cut(s) | 264, 443, 707 |
| Eco57I | CTGAAG | 1 cut(s) | 1176 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 726 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1322 |
| EcoRI | GAATTC | 1 cut(s) | 127 |
| EcoRII | CCWGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| EcoT14I | CCWWGG | 1 cut(s) | 430 |
| EcoT38I | GRGCYC | 4 cut(s) | 914, 974, 1325, 1367 |
| ErhI | CCWWGG | 1 cut(s) | 430 |
| Esp3I | CGTCTC | 1 cut(s) | 209 |
| FaeI | CATG | 4 cut(s) | 256, 434, 650, 1129 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 500, 532 |
| FaqI | GGGAC | 4 cut(s) | 200, 544, 693, 1255 |
| FatI | CATG | 4 cut(s) | 252, 430, 646, 1125 |
| FbaI | TGATCA | 2 cut(s) | 249, 559 |
| Fnu4HI | GCNGC | 6 cut(s) | 424, 718, 1119, 1341, 1476, 1560 |
| FokI | GGATG | 3 cut(s) | 404, 413, 1030 |
| FriOI | GRGCYC | 4 cut(s) | 914, 974, 1325, 1367 |
| Fsp4HI | GCNGC | 6 cut(s) | 424, 718, 1119, 1341, 1476, 1560 |
| FspBI | CTAG | 1 cut(s) | 1564 |
| GluI | GCNGC | 6 cut(s) | 424, 718, 1119, 1341, 1476, 1560 |
| GsaI | CCCAGC | 1 cut(s) | 314 |
| GsuI | CTGGAG | 2 cut(s) | 423, 1194 |
| HaeIII | GGCC | 3 cut(s) | 577, 1323, 1449 |
| HapII | CCGG | 1 cut(s) | 1287 |
| HgaI | GACGC | 2 cut(s) | 191, 459 |
| Hin1II | CATG | 4 cut(s) | 256, 434, 650, 1129 |
| HinfI | GANTC | 3 cut(s) | 591, 605, 1063 |
| HpaII | CCGG | 1 cut(s) | 1287 |
| HphI | GGTGA | 4 cut(s) | 562, 693, 1194, 1274 |
| Hpy166II | GTNNAC | 2 cut(s) | 622, 1399 |
| Hpy188I | TCNGA | 8 cut(s) | 73, 151, 264, 610, 747, 1068, 1432, 1483 |
| Hpy188III | TCNNGA | 4 cut(s) | 253, 508, 647, 1134 |
| Hpy8I | GTNNAC | 2 cut(s) | 622, 1399 |
| HpyAV | CCTTC | 1 cut(s) | 250 |
| HpyCH4IV | ACGT | 1 cut(s) | 274 |
| HpyCH4V | TGCA | 8 cut(s) | 145, 305, 683, 932, 1118, 1313, 1343, 1475 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 311, 377 |
| HpyF3I | CTNAG | 4 cut(s) | 70, 746, 780, 1057 |
| HpySE526I | ACGT | 1 cut(s) | 274 |
| Hsp92II | CATG | 4 cut(s) | 256, 434, 650, 1129 |
| Ksp22I | TGATCA | 2 cut(s) | 249, 559 |
| Kzo9I | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| LguI | GCTCTTC | 1 cut(s) | 192 |
| LmnI | GCTCC | 2 cut(s) | 1256, 1370 |
| Lsp1109I | GCAGC | 6 cut(s) | 435, 729, 1130, 1327, 1487, 1546 |
| LweI | GCATC | 4 cut(s) | 107, 435, 491, 1352 |
| MabI | ACCWGGT | 1 cut(s) | 703 |
| MaeI | CTAG | 1 cut(s) | 1564 |
| MaeII | ACGT | 1 cut(s) | 274 |
| MaeIII | GTNAC | 3 cut(s) | 490, 500, 1060 |
| MalI | GATC | 6 cut(s) | 75, 251, 261, 561, 1407, 1420 |
| MboI | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| MboII | GAAGA | 8 cut(s) | 42, 77, 209, 369, 673, 1182, 1311, 1323 |
| MflI | RGATCY | 2 cut(s) | 73, 1405 |
| MhlI | GDGCHC | 5 cut(s) | 280, 914, 974, 1325, 1367 |
| MlyI | GAGTC | 1 cut(s) | 1057 |
| MmeI | TCCRAC | 2 cut(s) | 451, 784 |
| MseI | TTAA | 7 cut(s) | 8, 78, 113, 939, 1092, 1179, 1530 |
| MslI | CAYNNNNRTG | 1 cut(s) | 58 |
| MspI | CCGG | 1 cut(s) | 1287 |
| MspR9I | CCNGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| MvaI | CCWGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 311, 377 |
| NcoI | CCATGG | 1 cut(s) | 430 |
| NdeII | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| NlaIII | CATG | 4 cut(s) | 256, 434, 650, 1129 |
| NlaIV | GGNNCC | 5 cut(s) | 709, 1285, 1323, 1366, 1450 |
| NmeAIII | GCCGAG | 1 cut(s) | 603 |
| NmuCI | GTSAC | 2 cut(s) | 500, 1060 |
| PagI | TCATGA | 2 cut(s) | 252, 646 |
| PasI | CCCWGGG | 1 cut(s) | 387 |
| PciSI | GCTCTTC | 1 cut(s) | 192 |
| PfeI | GAWTC | 2 cut(s) | 591, 605 |
| PflFI | GACNNNGTC | 1 cut(s) | 326 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 839, 920 |
| PfoI | TCCNGGA | 1 cut(s) | 445 |
| PkrI | GCNGC | 6 cut(s) | 425, 719, 1120, 1342, 1477, 1561 |
| PleI | GAGTC | 1 cut(s) | 1057 |
| PpsI | GAGTC | 1 cut(s) | 1057 |
| Psp6I | CCWGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| PspFI | CCCAGC | 1 cut(s) | 310 |
| PspGI | CCWGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| PspN4I | GGNNCC | 5 cut(s) | 709, 1285, 1323, 1366, 1450 |
| PspOMI | GGGCCC | 1 cut(s) | 1321 |
| PspPI | GGNCC | 6 cut(s) | 264, 443, 707, 1321, 1322, 1448 |
| PstNI | CAGNNNCTG | 3 cut(s) | 326, 839, 1481 |
| PsuI | RGATCY | 2 cut(s) | 73, 1405 |
| PsyI | GACNNNGTC | 1 cut(s) | 326 |
| RsaI | GTAC | 4 cut(s) | 515, 799, 1159, 1400 |
| RsaNI | GTAC | 4 cut(s) | 514, 798, 1158, 1399 |
| RseI | CAYNNNNRTG | 1 cut(s) | 58 |
| SapI | GCTCTTC | 1 cut(s) | 192 |
| SaqAI | TTAA | 7 cut(s) | 8, 78, 113, 939, 1092, 1179, 1530 |
| SatI | GCNGC | 6 cut(s) | 424, 718, 1119, 1341, 1476, 1560 |
| Sau3AI | GATC | 6 cut(s) | 73, 249, 259, 559, 1405, 1418 |
| Sau96I | GGNCC | 6 cut(s) | 264, 443, 707, 1321, 1322, 1448 |
| ScaI | AGTACT | 1 cut(s) | 515 |
| SchI | GAGTC | 1 cut(s) | 1057 |
| ScrFI | CCNGG | 6 cut(s) | 388, 441, 447, 705, 903, 1506 |
| SduI | GDGCHC | 5 cut(s) | 280, 914, 974, 1325, 1367 |
| SexAI | ACCWGGT | 1 cut(s) | 703 |
| SfaNI | GCATC | 4 cut(s) | 107, 435, 491, 1352 |
| SfcI | CTRYAG | 1 cut(s) | 1381 |
| SinI | GGWCC | 3 cut(s) | 264, 443, 707 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 58 |
| SmlI | CTYRAG | 1 cut(s) | 1206 |
| SmoI | CTYRAG | 1 cut(s) | 1206 |
| SspI | AATATT | 1 cut(s) | 465 |
| SspMI | CTAG | 1 cut(s) | 1564 |
| StyD4I | CCNGG | 6 cut(s) | 386, 439, 445, 703, 901, 1504 |
| StyI | CCWWGG | 1 cut(s) | 430 |
| TaiI | ACGT | 1 cut(s) | 277 |
| TaqI | TCGA | 1 cut(s) | 847 |
| TatI | WGTACW | 2 cut(s) | 513, 1157 |
| TfiI | GAWTC | 2 cut(s) | 591, 605 |
| Tru1I | TTAA | 7 cut(s) | 8, 78, 113, 939, 1092, 1179, 1530 |
| Tru9I | TTAA | 7 cut(s) | 8, 78, 113, 939, 1092, 1179, 1530 |
| TseFI | GTSAC | 2 cut(s) | 500, 1060 |
| TseI | GCWGC | 6 cut(s) | 423, 717, 1118, 1340, 1475, 1559 |
| Tsp45I | GTSAC | 2 cut(s) | 500, 1060 |
| TspDTI | ATGAA | 7 cut(s) | 157, 210, 269, 583, 635, 663, 905 |
| TspGWI | ACGGA | 1 cut(s) | 1416 |
| Tth111I | GACNNNGTC | 1 cut(s) | 326 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 839, 920 |
| VpaK11BI | GGWCC | 3 cut(s) | 264, 443, 707 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 726 |
| XapI | RAATTY | 6 cut(s) | 127, 934, 1069, 1099, 1108, 1426 |
| XspI | CTAG | 1 cut(s) | 1564 |
| ZrmI | AGTACT | 1 cut(s) | 515 |