Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002028

Physical Location & Seq

Genomic Coordinates Forward (+)

58639462 .. 58645927

Gene Structure 6466 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0456500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGTGGAAGCTTAGGTTTGGAGACGAAGGTGCAAATAATGACCCTTACTTGTTCAGCACAAACAACTTCCATGGGAGGCAAACATGGGAGTTCGACCCGGCTGCCGGCACACCTGAAGAGCGAGCAGAGGTCGAAGAAGTTCGGCTAAGTTTTTACAACAATCGTCACCGGGTCCAGGCTTGTAGTGACCTCCTCTGCCGAATGCAGCTTCTGGGAGAGAAAAAGTTCAAACAAAAGATTCCCCAAGTAAAGGTGGAGGATGGTGAGGACTGTACATATAAAAAGGCCACCGCTGCATTTAGAAGGGCAGCTACCTTCTACTCTGCCTTGCAATCACCTCACGGCCATTGGCCTGCTGAAAATGCCGGTCCCATGTTTTATATTCCTCCCTTGGTCATATCGCTCTATATTACGGGGCATCTTAGTAAGGTATTCTCTGCAGAGCATTTTAAGGAAATGCTTCGATATATATACTGTCATCAGAACGAGGATGGTGGGTGGGGATTACACATAGAGGGCCCTAGTATGATGTTTTGTACACTTCTGAATTACATTTGCATGCGTCTACTTGGAGAAGGACCCGATGGTGGTTTAAACAACGCTTGTGCAAGAGCACGCAAGTGGATTCTTGATCATGGTGGTGCAACACATTCATCATCCTGGGGAAAGACTTATATGGCAATACTCGGTGTGTATGAGTGGGAGGGATGCCACCCGATTCCCCCAGAGTTTTGGATTTTCCCTTCTTTGTTCCCTTTGCATCCAGCAAAAATGTACTGCTACTGCCGGTTGACTTACTTGCCTACATCGTATCTGTTTGGGAAAAGATTTGTTGGCCCCATCACCCCTCTCATTCTACAACTGAGAGAAGAAATGTACAATGAGCCATACAATGAAATTCAATGGGGCAAAGTACGCCATCTATGTGCAAAGGAGGATAACTACTATCCCCATGGCAAGTTTCAATGTTTGATATGGGATACTCTGAACACGGTTTATGAGCCTCTTGTTTCTTGCTGGCCCTTCAATAAGTTGAGAGAGAAGGCTCTTCAAGAAACTATTGAACACATTCATTATGAAGATGAAAATAGTCGATACATAACAATTGGATGTGGGGAAAAGCCATTAATGATGCTTGCTTGCTGGATTGAAGATCCGAATGGAGAACCCTTTAAGAAGCATCTTGCAAGAGTTATAGATTACATATGGGTTGCAGAAGATGGAATAACTACGCAGAGTTTTGGTAGCCAGGCATGGGATGCTAGTCTTTCTGTTCAAGCTTTGCTTGCTGGAAATCTCACTGAAGAACTTGGATCTGTACTTCAGAAAGCACATGAATTCCTAAAAAAATCTCAGATTAGGGATAATCCTTCTGGTGACTTCTTATCTCGGTTCCGTCACATTTCTAAAGGTGGTTGGACTTTCTCTGACCAAGATCATGGATGGCAAGTTTCTGATTGTACTGCAGAGTGTTTGAAGTGTTGCCTATTGCTTTCAATGATGCCGACGCAAATTGTGGGTGAACCAGTTGAATCTGAGCGCTTGTATGATGCTGTCAATGTCATACTTTCTCTGCAAAATTCAAATGGTGGTGTATCAGCCTGGCAGCCAACAGGAGCTCCAAAATGGTTGGAGTGGTTCAATCCAGTAGAATTTCTCGAGAATGTCGTCATTGAATACGATTATGTTGAGTGCACTTCATCTTCAATTCAAGCGTTAGCTTTATTCAGGAAGTTATACCCTGGGCATAGAAAGAAACATATCGATGATTTCATCACAAATGCAGCATGTTACCTTGAAGACATGCAGACACCTGATGGCTCATGGTATGGAAGATGGGGAATCTGCTTCATCTATGGAACATGGTTTGCAATCCGAGGGTTGAAGGCTGCTGGTAGAACTTACAAAAATTGTGAGGCGATACGCAGAGGTGTTGAATTTTTACTCAAAATACAGAGAAATAATGGTGGTTGGGGAGAGAGCTATACTTCTTGTACAAACAAGATCTATACACCTCTTCAAGGCGACCGGTCGAATTTGGTGCAGACTGCAATGGGACTACTAGGATTAATTCATGGTGGACAGGCCGAGAGAGACCCTACTCCCATTCACAGAGCTGCGAAGCTTTTGATTAATTCTCAATTGGAAAATGGAGATTTCCCCCAACAGGAACTGATGGGGGTTTTCAATGTCAATGCCATGTTACACTATGCAGCATACAGGAATATCTTCCCAATTTGGGCTCTTGGAGAATATCGTTCCCTTCCCTCCTTCTGGATAGATGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

762

Amino Acids

87.25

Weight (kDa)

6.11

Isoelectric Point (pI)

47.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SQHop_cyclase_N	PF13249	102 - 362	5.8e-36	Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C	PF13243	416 - 753	4.4e-49	Squalene-hopene cyclase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07810 AT3G07810
fragaria_vesca	FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320
malus_domestica	MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1
prunus_persica	Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1
pyrus_communis	pycom09g04550 pycom17g10350 pycom17g10380
rosa_chinensis	RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871
rosa_laevigata	RLG00000020945 RLG00000020948
rosa_multiflora	Rmu_co8440963.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092640 Rroxscaffold_2G00092680
rosa_rugosa	Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900
rosa_samantha	Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700
rosa_wichuraiana	Rw2G043110 Rw2G043140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	565
AciI	CCGC	1 cut(s)	291
AclWI	GGATC	2 cut(s)	1148, 1321
AcoI	YGGCCR	1 cut(s)	343
AcsI	RAATTY	6 cut(s)	897, 1337, 1579, 1652, 1937, 2035
AcuI	CTGAAG	3 cut(s)	135, 1307, 1323
AfaI	GTAC	8 cut(s)	274, 538, 776, 878, 915, 1320, 1462, 1996
AfeI	AGCGCT	1 cut(s)	1541
AfiI	CCNNNNNNNGG	9 cut(s)	104, 175, 250, 587, 1255, 2021, 2167, 2239, 2274
AgeI	ACCGGT	1 cut(s)	2028
AjnI	CCWGG	5 cut(s)	174, 659, 1248, 1601, 1741
AleI	CACNNNNGTG	1 cut(s)	619
AluBI	AGCT	9 cut(s)	10, 208, 311, 1280, 1619, 1721, 1983, 2117, 2125
AluI	AGCT	9 cut(s)	10, 208, 311, 1280, 1619, 1721, 1983, 2117, 2125
Alw21I	GWGCWC	3 cut(s)	616, 1621, 1697
Alw26I	GTCTC	2 cut(s)	15, 2088
Alw44I	GTGCAC	1 cut(s)	1693
AlwI	GGATC	2 cut(s)	1148, 1321
AlwNI	CAGNNNCTG	2 cut(s)	211, 2173
Ama87I	CYCGRG	1 cut(s)	1658
Aor51HI	AGCGCT	1 cut(s)	1541
AoxI	GGCC	7 cut(s)	285, 343, 350, 517, 835, 1019, 2085
ApaI	GGGCCC	1 cut(s)	521
ApaLI	GTGCAC	1 cut(s)	1693
ApeKI	GCWGC	9 cut(s)	101, 205, 293, 308, 1606, 1784, 1889, 2117, 2213
ApoI	RAATTY	6 cut(s)	897, 1337, 1579, 1652, 1937, 2035
AseI	ATTAAT	3 cut(s)	1127, 2069, 2133
AsiGI	ACCGGT	1 cut(s)	2028
Asp700I	GAANNNNTTC	5 cut(s)	138, 224, 459, 1068, 2228
AspLEI	GCGC	1 cut(s)	1542
AspS9I	GGNCC	7 cut(s)	172, 368, 517, 518, 578, 836, 1020
AsuC2I	CCSGG	2 cut(s)	98, 170
AsuHPI	GGTGA	6 cut(s)	158, 275, 327, 835, 1388, 1532
AvaI	CYCGRG	1 cut(s)	1658
AvaII	GGWCC	3 cut(s)	172, 368, 578
BaeGI	GKGCMC	2 cut(s)	521, 1697
BanII	GRGCYC	3 cut(s)	521, 1621, 2245
BarI	GAAGNNNNNNTAC	2 cut(s)	295, 327
BbsI	GAAGAC	1 cut(s)	1806
Bbv12I	GWGCWC	3 cut(s)	616, 1621, 1697
BbvI	GCAGC	9 cut(s)	88, 217, 280, 320, 1618, 1796, 1876, 2104, 2225
BceAI	ACGGC	1 cut(s)	358
BcgI	CGANNNNNNTGC	4 cut(s)	83, 117, 2023, 2057
BciT130I	CCWGG	5 cut(s)	176, 661, 1250, 1603, 1743
BciVI	GTATCC	1 cut(s)	973
BclI	TGATCA	1 cut(s)	631
BcnI	CCSGG	2 cut(s)	98, 170
BcoDI	GTCTC	2 cut(s)	15, 2088
BfaI	CTAG	3 cut(s)	522, 1263, 2063
BfmI	CTRYAG	2 cut(s)	438, 1464
BfoI	RGCGCY	1 cut(s)	1543
BfuI	GTATCC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	2004
BisI	GCNGC	9 cut(s)	102, 206, 294, 309, 1607, 1785, 1890, 2118, 2214
BlsI	GCNGC	9 cut(s)	103, 207, 295, 310, 1608, 1786, 1891, 2119, 2215
Bme1390I	CCNGG	7 cut(s)	98, 170, 176, 661, 1250, 1603, 1743
Bme18I	GGWCC	3 cut(s)	172, 368, 578
BmeT110I	CYCGRG	1 cut(s)	1658
BmgT120I	GGNCC	7 cut(s)	172, 368, 517, 518, 578, 836, 1020
BmiI	GGNNCC	6 cut(s)	173, 370, 519, 580, 838, 1394
BmrFI	CCNGG	7 cut(s)	98, 170, 176, 661, 1250, 1603, 1743
BmsI	GCATC	8 cut(s)	427, 698, 769, 1122, 1189, 1249, 1491, 1540
BpiI	GAAGAC	1 cut(s)	1806
Bpu10I	CCTNAGC	1 cut(s)	11
BpuMI	CCSGG	2 cut(s)	98, 170
Bsa29I	ATCGAT	1 cut(s)	1764
BsaI	GGTCTC	1 cut(s)	2088
BsaJI	CCNNGG	7 cut(s)	70, 390, 660, 952, 1741, 1742, 1876
BsaWI	WCCGGW	1 cut(s)	2028
BsaXI	ACNNNNNCTCC	2 cut(s)	1603, 1633
Bsc4I	CCNNNNNNNGG	9 cut(s)	104, 175, 250, 587, 1255, 2021, 2167, 2239, 2274
Bse118I	RCCGGY	4 cut(s)	104, 365, 786, 2028
Bse1I	ACTGG	2 cut(s)	1526, 1646
Bse3DI	GCAATG	1 cut(s)	2058
BseBI	CCWGG	5 cut(s)	176, 661, 1250, 1603, 1743
BseCI	ATCGAT	1 cut(s)	1764
BseDI	CCNNGG	7 cut(s)	70, 390, 660, 952, 1741, 1742, 1876
BseGI	GGATG	8 cut(s)	265, 496, 656, 713, 760, 1115, 1264, 1448
BseLI	CCNNNNNNNGG	9 cut(s)	104, 175, 250, 587, 1255, 2021, 2167, 2239, 2274
BseMI	GCAATG	1 cut(s)	2058
BseMII	CTCAG	3 cut(s)	854, 1367, 1527
BseNI	ACTGG	2 cut(s)	1526, 1646
BseRI	GAGGAG	1 cut(s)	182
BseSI	GKGCMC	2 cut(s)	521, 1697
BseXI	GCAGC	9 cut(s)	88, 217, 280, 320, 1618, 1796, 1876, 2104, 2225
BsgI	GTGCAG	1 cut(s)	2063
Bsh1285I	CGRYCG	2 cut(s)	2029, 2033
BshFI	GGCC	7 cut(s)	287, 345, 352, 519, 837, 1021, 2087
BshTI	ACCGGT	1 cut(s)	2028
BshVI	ATCGAT	1 cut(s)	1764
BsiEI	CGRYCG	2 cut(s)	2029, 2033
BsiHKAI	GWGCWC	3 cut(s)	616, 1621, 1697
BsiHKCI	CYCGRG	1 cut(s)	1658
BsiSI	CCGG	6 cut(s)	98, 105, 169, 366, 787, 2029
BslFI	GGGAC	2 cut(s)	354, 2070
BslI	CCNNNNNNNGG	9 cut(s)	104, 175, 250, 587, 1255, 2021, 2167, 2239, 2274
BsmAI	GTCTC	2 cut(s)	15, 2088
BsmBI	CGTCTC	1 cut(s)	15
BsmFI	GGGAC	2 cut(s)	354, 2070
BsmI	GAATGC	1 cut(s)	207
BsnI	GGCC	7 cut(s)	287, 345, 352, 519, 837, 1021, 2087
Bso31I	GGTCTC	1 cut(s)	2088
BsoBI	CYCGRG	1 cut(s)	1658
Bsp120I	GGGCCC	1 cut(s)	517
Bsp1286I	GDGCHC	5 cut(s)	521, 616, 1621, 1697, 2245
Bsp1407I	TGTACA	4 cut(s)	272, 536, 876, 1994
Bsp143I	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
Bsp19I	CCATGG	2 cut(s)	70, 952
BspACI	CCGC	1 cut(s)	291
BspANI	GGCC	7 cut(s)	287, 345, 352, 519, 837, 1021, 2087
BspCNI	CTCAG	3 cut(s)	855, 1366, 1528
BspDI	ATCGAT	1 cut(s)	1764
BspLI	GGNNCC	6 cut(s)	173, 370, 519, 580, 838, 1394
BspMAI	CTGCAG	2 cut(s)	442, 1468
BspPI	GGATC	2 cut(s)	1148, 1321
BspQI	GCTCTTC	2 cut(s)	111, 1053
BspTNI	GGTCTC	1 cut(s)	2088
BsrDI	GCAATG	1 cut(s)	2058
BsrFI	RCCGGY	4 cut(s)	104, 365, 786, 2028
BsrGI	TGTACA	4 cut(s)	272, 536, 876, 1994
BsrI	ACTGG	2 cut(s)	1526, 1646
BssAI	RCCGGY	4 cut(s)	104, 365, 786, 2028
BssECI	CCNNGG	7 cut(s)	70, 390, 660, 952, 1741, 1742, 1876
BssMI	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
BssT1I	CCWWGG	3 cut(s)	70, 390, 952
Bst2UI	CCWGG	5 cut(s)	176, 661, 1250, 1603, 1743
Bst4CI	ACNGT	3 cut(s)	272, 476, 994
Bst6I	CTCTTC	3 cut(s)	111, 1053, 2022
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstAUI	TGTACA	4 cut(s)	272, 536, 876, 1994
BstC8I	GCNNGC	9 cut(s)	106, 123, 354, 560, 616, 1019, 1137, 1141, 1287
BstDEI	CTNAG	6 cut(s)	11, 146, 422, 863, 1353, 1536
BstDSI	CCRYGG	2 cut(s)	70, 952
BstENI	CCTNNNNNAGG	1 cut(s)	2019
BstF5I	GGATG	8 cut(s)	265, 496, 656, 713, 760, 1115, 1264, 1448
BstH2I	RGCGCY	1 cut(s)	1543
BstHHI	GCGC	1 cut(s)	1542
BstKTI	GATC	5 cut(s)	634, 1156, 1316, 1438, 2007
BstMAI	GTCTC	2 cut(s)	15, 2088
BstMBI	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
BstMCI	CGRYCG	2 cut(s)	2029, 2033
BstMWI	GCNNNNNNNGC	5 cut(s)	293, 362, 915, 1259, 1286
BstNI	CCWGG	5 cut(s)	176, 661, 1250, 1603, 1743
BstNSI	RCATGY	3 cut(s)	562, 1791, 1807
BstSCI	CCNGG	7 cut(s)	96, 168, 174, 659, 1248, 1601, 1741
BstSFI	CTRYAG	2 cut(s)	438, 1464
BstSLI	GKGCMC	2 cut(s)	521, 1697
BstV1I	GCAGC	9 cut(s)	88, 217, 280, 320, 1618, 1796, 1876, 2104, 2225
BstV2I	GAAGAC	1 cut(s)	1806
BstX2I	RGATCY	3 cut(s)	1153, 1313, 2004
BstXI	CCANNNNNNTGG	2 cut(s)	732, 1439
BstYI	RGATCY	3 cut(s)	1153, 1313, 2004
Bsu15I	ATCGAT	1 cut(s)	1764
BsuI	GTATCC	1 cut(s)	973
BsuRI	GGCC	7 cut(s)	287, 345, 352, 519, 837, 1021, 2087
BsuTUI	ATCGAT	1 cut(s)	1764
BtgI	CCRYGG	2 cut(s)	70, 952
BtsCI	GGATG	8 cut(s)	265, 496, 656, 713, 760, 1115, 1264, 1448
BtsIMutI	CAGTG	1 cut(s)	1299
Cac8I	GCNNGC	9 cut(s)	106, 123, 354, 560, 616, 1019, 1137, 1141, 1287
CaiI	CAGNNNCTG	2 cut(s)	211, 2173
CfoI	GCGC	1 cut(s)	1542
Cfr10I	RCCGGY	4 cut(s)	104, 365, 786, 2028
Cfr13I	GGNCC	7 cut(s)	172, 368, 517, 518, 578, 836, 1020
ClaI	ATCGAT	1 cut(s)	1764
CseI	GACGC	2 cut(s)	551, 1516
Csp6I	GTAC	8 cut(s)	273, 537, 775, 877, 914, 1319, 1461, 1995
CspAI	ACCGGT	1 cut(s)	2028
CviQI	GTAC	8 cut(s)	273, 537, 775, 877, 914, 1319, 1461, 1995
DdeI	CTNAG	6 cut(s)	11, 146, 422, 863, 1353, 1536
DpnI	GATC	5 cut(s)	633, 1155, 1315, 1437, 2006
DpnII	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
DraI	TTTAAA	1 cut(s)	594
EaeI	YGGCCR	1 cut(s)	343
Eam1104I	CTCTTC	3 cut(s)	111, 1053, 2022
EarI	CTCTTC	3 cut(s)	111, 1053, 2022
Ecl136II	GAGCTC	1 cut(s)	1619
Eco130I	CCWWGG	3 cut(s)	70, 390, 952
Eco24I	GRGCYC	3 cut(s)	521, 1621, 2245
Eco31I	GGTCTC	1 cut(s)	2088
Eco47I	GGWCC	3 cut(s)	172, 368, 578
Eco47III	AGCGCT	1 cut(s)	1541
Eco53kI	GAGCTC	1 cut(s)	1619
Eco57I	CTGAAG	3 cut(s)	135, 1307, 1323
Eco88I	CYCGRG	1 cut(s)	1658
EcoICRI	GAGCTC	1 cut(s)	1619
EcoNI	CCTNNNNNAGG	1 cut(s)	2019
EcoO109I	RGGNCCY	3 cut(s)	517, 518, 578
EcoRI	GAATTC	1 cut(s)	1337
EcoRII	CCWGG	5 cut(s)	174, 659, 1248, 1601, 1741
EcoT14I	CCWWGG	3 cut(s)	70, 390, 952
EcoT38I	GRGCYC	3 cut(s)	521, 1621, 2245
ErhI	CCWWGG	3 cut(s)	70, 390, 952
Esp3I	CGTCTC	1 cut(s)	15
FalI	AAGNNNNNCTT	2 cut(s)	1269, 1301
FaqI	GGGAC	2 cut(s)	354, 2070
FauNDI	CATATG	1 cut(s)	1205
FbaI	TGATCA	1 cut(s)	631
FblI	GTMKAC	1 cut(s)	565
Fnu4HI	GCNGC	9 cut(s)	102, 206, 294, 309, 1607, 1785, 1890, 2118, 2214
FokI	GGATG	8 cut(s)	272, 503, 643, 720, 747, 1122, 1271, 1455
FriOI	GRGCYC	3 cut(s)	521, 1621, 2245
Fsp4HI	GCNGC	9 cut(s)	102, 206, 294, 309, 1607, 1785, 1890, 2118, 2214
FspBI	CTAG	3 cut(s)	522, 1263, 2063
GlaI	GCGC	1 cut(s)	1541
GluI	GCNGC	9 cut(s)	102, 206, 294, 309, 1607, 1785, 1890, 2118, 2214
HaeII	RGCGCY	1 cut(s)	1543
HaeIII	GGCC	7 cut(s)	287, 345, 352, 519, 837, 1021, 2087
HapII	CCGG	6 cut(s)	98, 105, 169, 366, 787, 2029
HgaI	GACGC	2 cut(s)	551, 1516
HhaI	GCGC	1 cut(s)	1542
Hin6I	GCGC	1 cut(s)	1540
HinP1I	GCGC	1 cut(s)	1540
HincII	GTYRAC	1 cut(s)	792
HindII	GTYRAC	1 cut(s)	792
HindIII	AAGCTT	3 cut(s)	8, 1278, 2123
HinfI	GANTC	5 cut(s)	238, 625, 718, 1532, 1842
HpaII	CCGG	6 cut(s)	98, 105, 169, 366, 787, 2029
HphI	GGTGA	6 cut(s)	158, 275, 327, 835, 1388, 1532
Hpy166II	GTNNAC	6 cut(s)	539, 566, 792, 1523, 1695, 2081
Hpy188III	TCNNGA	6 cut(s)	629, 1052, 1658, 1660, 1729, 2275
Hpy8I	GTNNAC	6 cut(s)	539, 566, 792, 1523, 1695, 2081
Hpy99I	CGWCG	1 cut(s)	1510
HpyCH4III	ACNGT	3 cut(s)	272, 476, 994
HpyF10VI	GCNNNNNNNGC	5 cut(s)	293, 362, 915, 1259, 1286
HpyF3I	CTNAG	6 cut(s)	11, 146, 422, 863, 1353, 1536
HspAI	GCGC	1 cut(s)	1540
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	1 cut(s)	631
Kzo9I	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
LguI	GCTCTTC	2 cut(s)	111, 1053
LmnI	GCTCC	2 cut(s)	1616, 1624
Lsp1109I	GCAGC	9 cut(s)	88, 217, 280, 320, 1618, 1796, 1876, 2104, 2225
LweI	GCATC	8 cut(s)	427, 698, 769, 1122, 1189, 1249, 1491, 1540
MaeI	CTAG	3 cut(s)	522, 1263, 2063
MaeIII	GTNAC	6 cut(s)	164, 185, 1376, 1397, 1790, 2202
MalI	GATC	5 cut(s)	633, 1155, 1315, 1437, 2006
MboI	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
MfeI	CAATTG	2 cut(s)	1104, 2141
MflI	RGATCY	3 cut(s)	1153, 1313, 2004
MhlI	GDGCHC	5 cut(s)	521, 616, 1621, 1697, 2245
MmeI	TCCRAC	2 cut(s)	1397, 1611
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	5 cut(s)	138, 224, 459, 1068, 2228
MseI	TTAA	6 cut(s)	450, 593, 1127, 1173, 2069, 2133
MslI	CAYNNNNRTG	5 cut(s)	557, 619, 639, 924, 1764
MspA1I	CMGCKG	1 cut(s)	293
MspI	CCGG	6 cut(s)	98, 105, 169, 366, 787, 2029
MspR9I	CCNGG	7 cut(s)	98, 170, 176, 661, 1250, 1603, 1743
MssI	GTTTAAAC	1 cut(s)	594
MunI	CAATTG	2 cut(s)	1104, 2141
Mva1269I	GAATGC	1 cut(s)	207
MvaI	CCWGG	5 cut(s)	176, 661, 1250, 1603, 1743
MwoI	GCNNNNNNNGC	5 cut(s)	293, 362, 915, 1259, 1286
NaeI	GCCGGC	1 cut(s)	106
NciI	CCSGG	2 cut(s)	98, 170
NcoI	CCATGG	2 cut(s)	70, 952
NdeI	CATATG	1 cut(s)	1205
NdeII	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
NgoMIV	GCCGGC	1 cut(s)	104
NlaIV	GGNNCC	6 cut(s)	173, 370, 519, 580, 838, 1394
NmeAIII	GCCGAG	1 cut(s)	2113
NmuCI	GTSAC	4 cut(s)	164, 185, 1376, 1397
NspI	RCATGY	3 cut(s)	562, 1791, 1807
OliI	CACNNNNGTG	1 cut(s)	619
PaeI	GCATGC	1 cut(s)	562
PaeR7I	CTCGAG	1 cut(s)	1658
PasI	CCCWGGG	1 cut(s)	1742
PciSI	GCTCTTC	2 cut(s)	111, 1053
PcsI	WCGNNNNNNNCGW	1 cut(s)	1665
PctI	GAATGC	1 cut(s)	207
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	5 cut(s)	138, 224, 459, 1068, 2228
PfeI	GAWTC	5 cut(s)	238, 625, 718, 1532, 1842
PinAI	ACCGGT	1 cut(s)	2028
PkrI	GCNGC	9 cut(s)	103, 207, 295, 310, 1608, 1786, 1891, 2119, 2215
PmeI	GTTTAAAC	1 cut(s)	594
PpuMI	RGGWCCY	1 cut(s)	578
PshBI	ATTAAT	3 cut(s)	1127, 2069, 2133
Psp124BI	GAGCTC	1 cut(s)	1621
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	5 cut(s)	174, 659, 1248, 1601, 1741
PspGI	CCWGG	5 cut(s)	174, 659, 1248, 1601, 1741
PspN4I	GGNNCC	6 cut(s)	173, 370, 519, 580, 838, 1394
PspOMI	GGGCCC	1 cut(s)	517
PspPI	GGNCC	7 cut(s)	172, 368, 517, 518, 578, 836, 1020
PspPPI	RGGWCCY	1 cut(s)	578
PstI	CTGCAG	2 cut(s)	442, 1468
PstNI	CAGNNNCTG	2 cut(s)	211, 2173
PsuI	RGATCY	3 cut(s)	1153, 1313, 2004
RsaI	GTAC	8 cut(s)	274, 538, 776, 878, 915, 1320, 1462, 1996
RsaNI	GTAC	8 cut(s)	273, 537, 775, 877, 914, 1319, 1461, 1995
RseI	CAYNNNNRTG	5 cut(s)	557, 619, 639, 924, 1764
SacI	GAGCTC	1 cut(s)	1621
SapI	GCTCTTC	2 cut(s)	111, 1053
SaqAI	TTAA	6 cut(s)	450, 593, 1127, 1173, 2069, 2133
SatI	GCNGC	9 cut(s)	102, 206, 294, 309, 1607, 1785, 1890, 2118, 2214
Sau3AI	GATC	5 cut(s)	631, 1153, 1313, 1435, 2004
Sau96I	GGNCC	7 cut(s)	172, 368, 517, 518, 578, 836, 1020
ScrFI	CCNGG	7 cut(s)	98, 170, 176, 661, 1250, 1603, 1743
SduI	GDGCHC	5 cut(s)	521, 616, 1621, 1697, 2245
SfaNI	GCATC	8 cut(s)	427, 698, 769, 1122, 1189, 1249, 1491, 1540
SfcI	CTRYAG	2 cut(s)	438, 1464
Sfr274I	CTCGAG	1 cut(s)	1658
SinI	GGWCC	3 cut(s)	172, 368, 578
SlaI	CTCGAG	1 cut(s)	1658
SmiMI	CAYNNNNRTG	5 cut(s)	557, 619, 639, 924, 1764
SmlI	CTYRAG	1 cut(s)	1658
SmoI	CTYRAG	1 cut(s)	1658
SphI	GCATGC	1 cut(s)	562
SsiI	CCGC	1 cut(s)	291
SspMI	CTAG	3 cut(s)	522, 1263, 2063
SstI	GAGCTC	1 cut(s)	1621
StyD4I	CCNGG	7 cut(s)	96, 168, 174, 659, 1248, 1601, 1741
StyI	CCWWGG	3 cut(s)	70, 390, 952
TaaI	ACNGT	3 cut(s)	272, 476, 994
TaqI	TCGA	7 cut(s)	93, 132, 463, 1093, 1659, 1764, 2033
TatI	WGTACW	7 cut(s)	272, 536, 774, 876, 1318, 1460, 1994
TfiI	GAWTC	5 cut(s)	238, 625, 718, 1532, 1842
Tru1I	TTAA	6 cut(s)	450, 593, 1127, 1173, 2069, 2133
Tru9I	TTAA	6 cut(s)	450, 593, 1127, 1173, 2069, 2133
TscAI	CASTG	1 cut(s)	1306
TseFI	GTSAC	4 cut(s)	164, 185, 1376, 1397
TseI	GCWGC	9 cut(s)	101, 205, 293, 308, 1606, 1784, 1889, 2117, 2213
Tsp45I	GTSAC	4 cut(s)	164, 185, 1376, 1397
TspGWI	ACGGA	1 cut(s)	1385
TspRI	CASTG	1 cut(s)	1306
VneI	GTGCAC	1 cut(s)	1693
VpaK11BI	GGWCC	3 cut(s)	172, 368, 578
VspI	ATTAAT	3 cut(s)	1127, 2069, 2133
XagI	CCTNNNNNAGG	1 cut(s)	2019
XapI	RAATTY	6 cut(s)	897, 1337, 1579, 1652, 1937, 2035
XceI	RCATGY	3 cut(s)	562, 1791, 1807
XhoI	CTCGAG	1 cut(s)	1658
XmiI	GTMKAC	1 cut(s)	565
XmnI	GAANNNNTTC	5 cut(s)	138, 224, 459, 1068, 2228
XspI	CTAG	3 cut(s)	522, 1263, 2063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.