Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004339

Physical Location & Seq

Genomic Coordinates Reverse (-)

38605554 .. 38610656

Gene Structure 5103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g52410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGATGGGTGGAGTTGACTTTGCATTGTGGGTGGTTCTGCTTCTGGGTTTGTGTGTTAATGGCGGGTCGGAAATGGCGCCGGGTCGGAGGGTCCATACTCTGTTCTCGGTGGAGTGCCAGGACTACTTCGACTGGCAGACTGTGGGACTCATGCACAGCTTCAAGAAGGCAAAGCAACCCGGCCCGATTACCCGGCTGCTGAGCTGTACCAAGGAAGAGAGGAAGAAGTACAAAGGCATGCATTTGGCTCCTACTTTTGAGGTGCCTTCTATGAGTAGGCACCCCAAGACTGGTGACTGGTACCCTGCCATTAACAAACCTGCTGGAGTTGTGCACTGGCTTAAGTATAGTGAAGAAGCTAAGAATGTTGATTGGGTTGTGATACTGGATGCAGACATGATCATACGGGGGCCGATTGTTCCTTGGGAACTTGGTGCCGAGAAAGGCTACGCTGTGGCAGCATACTACGGGTATTTAATTGGATGCAATAATATTCTGGCTCAATTGCATACAAAGCACCCAGAATTTTGTGATAAAGTTGGTGGGCTCTTAGCAATGCATATAGATGATCTTCGAGCATTGGCACCTATGTGGCTTTCAAAAACAGAAGAGGTGCGAGAAGATAGAGCTCACTGGGGAACTAATATAACTGGTGACATTTATTCAAGCGGATGGATCAGTGAAATGTATGGATACTCTTTTGGTGCAGCAGAGGTTGGTCTCCGGCACAAAATAAATGATAACTTGATGATCTATCCAGGATATATTCCACAAGAGGGTGTTGTGCCTATTCTTCTTCACTATGGCTTGCCATTTAGCGTGGGAAATTGGTCCTTTAGTAAATTAGATCACCATGAAGATGGAATTGTTTATGATTGCGGCCGTCTCTTTCCTGAACCTCCTTATCCAAAAGAGGTTAAACTGATGGAACCAGATGCATATAAAAGGCGGGGTCTCCTTTTGAATCTAGAGTGTGTCAACACTTTGAATGAGGGACTTTTACTTCAACATGCAGCAAATGGTTGCCCTAAGCCAAAGTGGTCAAGATACATTAGCTTTCTGAAAAGCAAAACTTTTGCTGAGCTGACTCAACCAAAACAGCTGACTGCTGCCACTTTAGGAATTGAGGGGAAGGTACAGCAGGTTGTAGACGAACCTGCGGAGCCATATCCAAAAATCCATACTTTATTTTCCACAGAATGCACCCCTTACTTTGATTGGCAGACTGTTGGACTTGTCCACAGTTTTCACCTCAGTGGACAGCCTGGAAATATCACGCGATTACTCAGTTGTACTGATGAAGACCTAAAGCAATATGCTGGCCATGATCTGGCCCCAACACATTATGTTCCTTCCATGAGCCGACATCCATTAACGGGCGATTGGTATCCAGCAATTAACAAACCAGCTGCAGTCCTTCATTGGCTGAATCATGTGGATACTGATGCAGAGTACATAGTGATTCTTGATGCTGATATGATTTTGAGAGGCCCAATTACACCATGGGAATTCAAAGCAGCACGTGGCCAGCCAGTTTCAACTCCCTATGACTATCTTATTGGCTGTGACAATGTACTCGCAAAGCTTCATACTCGCCATCCGGAAGCCTGTGACAAGGTCGGGGGTGTCATCATCATGCATATAGATGATCTTCGTCAATTTGCTTTACTATGGTTGCATAAAACCGAGGAAGTTCGGGCAGACAGAGCTCATTATGCCACAAATATTACTGGAGATATATTTTCATCTGGTTGGATAAGTGAGATGTATGGTTACTCATTTGGTGCAGCAGAGATGAAATTAAGGCATCGCATAAGCAGTGAGATACTGATATACCCAGGATATGCTCCTTCACCTGGTGTAAACTACAGAGTTTTCCACTACGGTTTGGAATTCAAAGTTGGAAATTGGAGTTTTGACAAGGCAAAGTGGAGGAATACTGATGTGGTTAATAGGTGCTGGGCTCAGTTTCCAGACCCACCAGACCCTTCAACACTTGACCAGACGGACAATAACATACTGCAGAGGGATCTTCTTAGCATAGAATGCATCAAGACACTAAATGAAGCATTAAGGCTGCATCATGAGAGGCGGAAGTGTCCTGACCCTAATTCCCTGTCCAATTCAAACTCAGATGCACAAGAAGAACTTGTAGTATCGAGGAAATTTGGGAAGATGAATGTAAGTTCTGTTGTAGAGAGCAACCATGATCAAAAGAATCAGTCTGGGGAACATTCAGAACCTACCGAGACAGATGGGATGTTTAGTTCTGTCAGGTTCTGGGTTATTGCTTTCTGGGCATTCTGTGGCTTGGTCTTCTTGACAGTTGCATCAGTGTTGTTTTCTGGTCGGAAAGGGAAAGGCAAAAGAGGTAAAAGTTATAGAGTTAAGAGAAGAAATTCGGGTTCAGGATTCATGGATGTTAATGGACGTGATAGGCATTTACAAGTACCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

No domains found.

Protein Analysis

820

Amino Acids

92.56

Weight (kDa)

6.65

Isoelectric Point (pI)

50.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HPAT	PF23452	32 - 256	3.9e-18	Hydroxyproline O-arabinosyltransferase family
HPAT	PF23452	395 - 662	6.4e-19	Hydroxyproline O-arabinosyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01720
fragaria_vesca	FvH4_6g52410
malus_domestica	MD04G1153000.v1.1 MD08G1068600.v1.1 MD09G1018400.v1.1 MD16G1283700.v1.1 MD17G1018800.v1.1
prunus_persica	Prupe.3G298800_v2.0.a1
pyrus_communis	pycom111g01530 pycom15g31850 pycom17g01550 pycom17g01560
rosa_chinensis	RchiOBHm_Chr2g0174041 RchiOBHm_Chr2g0174051
rosa_laevigata	RLG00000022239 RLG00000022240
rosa_multiflora	Rmu_co8300129.1_g000001 Rmu_co8470913.1_g000001 Rmu_sc0037186.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078500 Rroxscaffold_2G00078510
rosa_rugosa	Rorug02G0574200
rosa_samantha	Rh2AG643300 Rh2AG653400 Rh2AG653600 Rh2BG664700 Rh2BG664900 Rh2CG629100 Rh2CG629200 Rh2DG679500 Rh2DG679600
rosa_wichuraiana	Rw2G053670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	328, 1132, 1165
Acc65I	GGTACC	1 cut(s)	300
AccB1I	GGYRCC	6 cut(s)	76, 262, 279, 300, 434, 583
AccB7I	CCANNNNNTGG	1 cut(s)	1330
AccI	GTMKAC	1 cut(s)	1149
AccII	CGCG	1 cut(s)	1279
AccIII	TCCGGA	1 cut(s)	1600
AciI	CCGC	6 cut(s)	63, 669, 879, 949, 1160, 2092
AclWI	GGATC	2 cut(s)	683, 2037
AcoI	YGGCCR	3 cut(s)	880, 1321, 1525
AcsI	RAATTY	5 cut(s)	524, 1508, 1892, 2165, 2398
AcvI	CACGTG	1 cut(s)	1523
AcyI	GRCGYC	1 cut(s)	77
AdeI	CACNNNGTG	1 cut(s)	1859
AfaI	GTAC	8 cut(s)	208, 230, 302, 1137, 1294, 1454, 1575, 2451
AfiI	CCNNNNNNNGG	5 cut(s)	290, 776, 1330, 1376, 1856
AflII	CTTAAG	1 cut(s)	341
AjiI	CACGTC	1 cut(s)	2432
AjnI	CCWGG	5 cut(s)	117, 757, 1264, 1837, 1855
AjuI	GAANNNNNNNTTGG	2 cut(s)	1884, 1916
AleI	CACNNNNGTG	2 cut(s)	589, 1254
AloI	GAACNNNNNNTCC	2 cut(s)	2251, 2283
Alw21I	GWGCWC	3 cut(s)	336, 631, 1711
Alw26I	GTCTC	4 cut(s)	725, 890, 959, 2243
Alw44I	GTGCAC	1 cut(s)	332
AlwI	GGATC	2 cut(s)	683, 2037
AlwNI	CAGNNNCTG	1 cut(s)	2280
Aor13HI	TCCGGA	1 cut(s)	1600
AoxI	GGCC	7 cut(s)	181, 410, 880, 1321, 1332, 1489, 1525
ApaLI	GTGCAC	1 cut(s)	332
ApeKI	GCWGC	9 cut(s)	196, 458, 707, 1013, 1109, 1409, 1517, 1787, 2077
ApoI	RAATTY	5 cut(s)	524, 1508, 1892, 2165, 2398
Asp700I	GAANNNNTTC	1 cut(s)	2398
Asp718I	GGTACC	1 cut(s)	300
AspLEI	GCGC	1 cut(s)	79
AspS9I	GGNCC	6 cut(s)	91, 182, 410, 831, 1333, 1490
AsuC2I	CCSGG	3 cut(s)	81, 180, 193
AsuHPI	GGTGA	5 cut(s)	305, 665, 842, 1241, 1845
AvaII	GGWCC	2 cut(s)	91, 831
BaeGI	GKGCMC	1 cut(s)	336
BalI	TGGCCA	2 cut(s)	1323, 1527
BanI	GGYRCC	6 cut(s)	76, 262, 279, 300, 434, 583
BanII	GRGCYC	4 cut(s)	549, 631, 1711, 1966
BbrPI	CACGTG	1 cut(s)	1523
BbsI	GAAGAC	2 cut(s)	1308, 2308
Bbv12I	GWGCWC	3 cut(s)	336, 631, 1711
BbvI	GCAGC	9 cut(s)	183, 470, 719, 1025, 1096, 1396, 1529, 1799, 2064
BccI	CCATC	5 cut(s)	666, 854, 919, 1605, 2249
BceAI	ACGGC	1 cut(s)	867
BciT130I	CCWGG	5 cut(s)	119, 759, 1266, 1839, 1857
BciVI	GTATCC	3 cut(s)	686, 1398, 1432
BclI	TGATCA	2 cut(s)	399, 2209
BcnI	CCSGG	3 cut(s)	81, 180, 193
BcoDI	GTCTC	4 cut(s)	725, 890, 959, 2243
BfaI	CTAG	1 cut(s)	968
BfmI	CTRYAG	3 cut(s)	1410, 1867, 2021
BfoI	RGCGCY	1 cut(s)	80
BfrI	CTTAAG	1 cut(s)	341
BfuAI	ACCTGC	3 cut(s)	328, 1132, 1165
BfuI	GTATCC	3 cut(s)	686, 1398, 1432
BlpI	GCTNAGC	2 cut(s)	200, 1080
Bme1390I	CCNGG	8 cut(s)	81, 119, 180, 193, 759, 1266, 1839, 1857
Bme18I	GGWCC	2 cut(s)	91, 831
BmgBI	CACGTC	1 cut(s)	2432
BmgT120I	GGNCC	6 cut(s)	91, 182, 410, 831, 1333, 1490
BmrFI	CCNGG	8 cut(s)	81, 119, 180, 193, 759, 1266, 1839, 1857
BmrI	ACTGGG	1 cut(s)	643
BmuI	ACTGGG	1 cut(s)	643
BpiI	GAAGAC	2 cut(s)	1308, 2308
BpmI	CTGGAG	2 cut(s)	345, 1752
Bpu10I	CCTNAGC	1 cut(s)	1029
Bpu1102I	GCTNAGC	2 cut(s)	200, 1080
BpuMI	CCSGG	3 cut(s)	81, 180, 193
BsaAI	YACGTR	1 cut(s)	1523
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaHI	GRCGYC	1 cut(s)	77
BsaI	GGTCTC	2 cut(s)	725, 959
BsaJI	CCNNGG	5 cut(s)	210, 422, 1502, 1686, 1837
BsaWI	WCCGGW	1 cut(s)	1600
Bsc4I	CCNNNNNNNGG	5 cut(s)	290, 776, 1330, 1376, 1856
Bse1I	ACTGG	9 cut(s)	137, 295, 302, 341, 390, 638, 655, 1532, 1735
Bse3DI	GCAATG	1 cut(s)	561
Bse8I	GATNNNNATC	1 cut(s)	1386
BseAI	TCCGGA	1 cut(s)	1600
BseBI	CCWGG	5 cut(s)	119, 759, 1266, 1839, 1857
BseDI	CCNNGG	5 cut(s)	210, 422, 1502, 1686, 1837
BseGI	GGATG	7 cut(s)	394, 488, 677, 1366, 1597, 2265, 2425
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	5 cut(s)	290, 776, 1330, 1376, 1856
BseMI	GCAATG	1 cut(s)	561
BseMII	CTCAG	6 cut(s)	191, 1071, 1267, 1300, 1979, 2145
BseNI	ACTGG	9 cut(s)	137, 295, 302, 341, 390, 638, 655, 1532, 1735
BseSI	GKGCMC	1 cut(s)	336
BseX3I	CGGCCG	1 cut(s)	880
BseXI	GCAGC	9 cut(s)	183, 470, 719, 1025, 1096, 1396, 1529, 1799, 2064
BseYI	CCCAGC	1 cut(s)	1959
BsgI	GTGCAG	2 cut(s)	726, 1806
Bsh1236I	CGCG	1 cut(s)	1279
Bsh1285I	CGRYCG	1 cut(s)	883
BshFI	GGCC	7 cut(s)	183, 412, 882, 1323, 1334, 1491, 1527
BshNI	GGYRCC	6 cut(s)	76, 262, 279, 300, 434, 583
BsiEI	CGRYCG	1 cut(s)	883
BsiHKAI	GWGCWC	3 cut(s)	336, 631, 1711
BsiSI	CCGG	5 cut(s)	80, 180, 193, 724, 1601
BslFI	GGGAC	2 cut(s)	159, 1008
BslI	CCNNNNNNNGG	5 cut(s)	290, 776, 1330, 1376, 1856
BsmAI	GTCTC	4 cut(s)	725, 890, 959, 2243
BsmBI	CGTCTC	1 cut(s)	890
BsmFI	GGGAC	2 cut(s)	159, 1008
BsmI	GAATGC	3 cut(s)	1205, 2051, 2300
BsnI	GGCC	7 cut(s)	183, 412, 882, 1323, 1334, 1491, 1527
Bso31I	GGTCTC	2 cut(s)	725, 959
Bsp1286I	GDGCHC	5 cut(s)	336, 549, 631, 1711, 1966
Bsp13I	TCCGGA	1 cut(s)	1600
Bsp143I	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
Bsp1720I	GCTNAGC	2 cut(s)	200, 1080
Bsp19I	CCATGG	1 cut(s)	1502
BspACI	CCGC	6 cut(s)	63, 669, 879, 949, 1160, 2092
BspANI	GGCC	7 cut(s)	183, 412, 882, 1323, 1334, 1491, 1527
BspCNI	CTCAG	6 cut(s)	192, 1072, 1266, 1299, 1978, 2144
BspEI	TCCGGA	1 cut(s)	1600
BspFNI	CGCG	1 cut(s)	1279
BspHI	TCATGA	1 cut(s)	2083
BspMAI	CTGCAG	2 cut(s)	1414, 2025
BspMI	ACCTGC	3 cut(s)	328, 1132, 1165
BspPI	GGATC	2 cut(s)	683, 2037
BspT107I	GGYRCC	6 cut(s)	76, 262, 279, 300, 434, 583
BspTI	CTTAAG	1 cut(s)	341
BspTNI	GGTCTC	2 cut(s)	725, 959
BsrDI	GCAATG	1 cut(s)	561
BsrI	ACTGG	9 cut(s)	137, 295, 302, 341, 390, 638, 655, 1532, 1735
BssECI	CCNNGG	5 cut(s)	210, 422, 1502, 1686, 1837
BssMI	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
BssNI	GRCGYC	1 cut(s)	77
BssT1I	CCWWGG	3 cut(s)	210, 422, 1502
Bst2UI	CCWGG	5 cut(s)	119, 759, 1266, 1839, 1857
Bst4CI	ACNGT	5 cut(s)	142, 1228, 1244, 1886, 2326
Bst6I	CTCTTC	2 cut(s)	210, 603
BstACI	GRCGYC	1 cut(s)	77
BstAFI	CTTAAG	1 cut(s)	341
BstAPI	GCANNNNNTGC	1 cut(s)	2046
BstBAI	YACGTR	1 cut(s)	1523
BstC8I	GCNNGC	4 cut(s)	239, 809, 1321, 1529
BstDSI	CCRYGG	1 cut(s)	1502
BstF5I	GGATG	7 cut(s)	394, 488, 677, 1366, 1597, 2265, 2425
BstFNI	CGCG	1 cut(s)	1279
BstH2I	RGCGCY	1 cut(s)	80
BstHHI	GCGC	1 cut(s)	79
BstKTI	GATC	9 cut(s)	402, 571, 678, 753, 850, 1330, 1651, 2032, 2212
BstMAI	GTCTC	4 cut(s)	725, 890, 959, 2243
BstMBI	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
BstMCI	CGRYCG	1 cut(s)	883
BstMWI	GCNNNNNNNGC	6 cut(s)	458, 514, 1706, 1715, 2046, 2297
BstNI	CCWGG	5 cut(s)	119, 759, 1266, 1839, 1857
BstNSI	RCATGY	2 cut(s)	241, 1013
BstSCI	CCNGG	8 cut(s)	79, 117, 178, 191, 757, 1264, 1837, 1855
BstSFI	CTRYAG	3 cut(s)	1410, 1867, 2021
BstSLI	GKGCMC	1 cut(s)	336
BstUI	CGCG	1 cut(s)	1279
BstV1I	GCAGC	9 cut(s)	183, 470, 719, 1025, 1096, 1396, 1529, 1799, 2064
BstV2I	GAAGAC	2 cut(s)	1308, 2308
BstX2I	RGATCY	1 cut(s)	2029
BstXI	CCANNNNNNTGG	1 cut(s)	860
BstYI	RGATCY	1 cut(s)	2029
BstZI	CGGCCG	1 cut(s)	880
BsuI	GTATCC	3 cut(s)	686, 1398, 1432
BsuRI	GGCC	7 cut(s)	183, 412, 882, 1323, 1334, 1491, 1527
BtgI	CCRYGG	1 cut(s)	1502
BtgZI	GCGATG	1 cut(s)	1793
BtrI	CACGTC	1 cut(s)	2432
BtsCI	GGATG	7 cut(s)	394, 488, 677, 1366, 1597, 2265, 2425
BtsI	GCAGTG	1 cut(s)	1825
BtsIMutI	CAGTG	6 cut(s)	334, 631, 685, 1261, 1825, 2340
BveI	ACCTGC	3 cut(s)	328, 1132, 1165
Cac8I	GCNNGC	4 cut(s)	239, 809, 1321, 1529
CaiI	CAGNNNCTG	1 cut(s)	2280
CciI	TCATGA	1 cut(s)	2083
CfoI	GCGC	1 cut(s)	79
Cfr13I	GGNCC	6 cut(s)	91, 182, 410, 831, 1333, 1490
CsiI	ACCWGGT	1 cut(s)	1855
Csp6I	GTAC	8 cut(s)	207, 229, 301, 1136, 1293, 1453, 1574, 2450
CviQI	GTAC	8 cut(s)	207, 229, 301, 1136, 1293, 1453, 1574, 2450
DinI	GGCGCC	1 cut(s)	78
DpnI	GATC	9 cut(s)	401, 570, 677, 752, 849, 1329, 1650, 2031, 2211
DpnII	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
DraIII	CACNNNGTG	1 cut(s)	1859
EaeI	YGGCCR	3 cut(s)	880, 1321, 1525
EagI	CGGCCG	1 cut(s)	880
Eam1104I	CTCTTC	2 cut(s)	210, 603
EarI	CTCTTC	2 cut(s)	210, 603
EciI	GGCGGA	1 cut(s)	2107
Ecl136II	GAGCTC	2 cut(s)	629, 1709
EclXI	CGGCCG	1 cut(s)	880
Eco130I	CCWWGG	3 cut(s)	210, 422, 1502
Eco24I	GRGCYC	4 cut(s)	549, 631, 1711, 1966
Eco31I	GGTCTC	2 cut(s)	725, 959
Eco47I	GGWCC	2 cut(s)	91, 831
Eco52I	CGGCCG	1 cut(s)	880
Eco53kI	GAGCTC	2 cut(s)	629, 1709
Eco72I	CACGTG	1 cut(s)	1523
EcoICRI	GAGCTC	2 cut(s)	629, 1709
EcoRI	GAATTC	2 cut(s)	1508, 1892
EcoRII	CCWGG	5 cut(s)	117, 757, 1264, 1837, 1855
EcoT14I	CCWWGG	3 cut(s)	210, 422, 1502
EcoT22I	ATGCAT	5 cut(s)	243, 561, 940, 1641, 2051
EcoT38I	GRGCYC	4 cut(s)	549, 631, 1711, 1966
EgeI	GGCGCC	1 cut(s)	78
EheI	GGCGCC	1 cut(s)	78
ErhI	CCWWGG	3 cut(s)	210, 422, 1502
Esp3I	CGTCTC	1 cut(s)	890
FalI	AAGNNNNNCTT	4 cut(s)	1057, 1089, 2133, 2165
FaqI	GGGAC	2 cut(s)	159, 1008
FauI	CCCGC	2 cut(s)	56, 942
FbaI	TGATCA	2 cut(s)	399, 2209
FblI	GTMKAC	1 cut(s)	1149
FokI	GGATG	7 cut(s)	401, 495, 684, 1353, 1584, 2272, 2432
FriOI	GRGCYC	4 cut(s)	549, 631, 1711, 1966
FspBI	CTAG	1 cut(s)	968
GlaI	GCGC	1 cut(s)	78
GsaI	CCCAGC	1 cut(s)	1963
GsuI	CTGGAG	2 cut(s)	345, 1752
HaeII	RGCGCY	1 cut(s)	80
HaeIII	GGCC	7 cut(s)	183, 412, 882, 1323, 1334, 1491, 1527
HapII	CCGG	5 cut(s)	80, 180, 193, 724, 1601
HhaI	GCGC	1 cut(s)	79
Hin1I	GRCGYC	1 cut(s)	77
Hin6I	GCGC	1 cut(s)	77
HinP1I	GCGC	1 cut(s)	77
HincII	GTYRAC	2 cut(s)	16, 979
HindII	GTYRAC	2 cut(s)	16, 979
HindIII	AAGCTT	1 cut(s)	1583
HinfI	GANTC	7 cut(s)	147, 964, 1087, 1429, 1462, 2218, 2412
HpaII	CCGG	5 cut(s)	80, 180, 193, 724, 1601
HphI	GGTGA	5 cut(s)	305, 665, 842, 1241, 1845
Hpy166II	GTNNAC	7 cut(s)	16, 334, 979, 1150, 1240, 1259, 1864
Hpy188I	TCNGA	6 cut(s)	70, 87, 1062, 2134, 2239, 2352
Hpy8I	GTNNAC	7 cut(s)	16, 334, 979, 1150, 1240, 1259, 1864
HpyAV	CCTTC	7 cut(s)	160, 276, 1126, 1362, 1427, 1860, 1998
HpyCH4III	ACNGT	5 cut(s)	142, 1228, 1244, 1886, 2326
HpyCH4IV	ACGT	2 cut(s)	1522, 2431
HpyF10VI	GCNNNNNNNGC	6 cut(s)	458, 514, 1706, 1715, 2046, 2297
HpySE526I	ACGT	2 cut(s)	1522, 2431
Hsp92I	GRCGYC	1 cut(s)	77
HspAI	GCGC	1 cut(s)	77
KasI	GGCGCC	1 cut(s)	76
Kpn2I	TCCGGA	1 cut(s)	1600
KpnI	GGTACC	1 cut(s)	304
Ksp22I	TGATCA	2 cut(s)	399, 2209
Kzo9I	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
LmnI	GCTCC	3 cut(s)	253, 1162, 1852
Lsp1109I	GCAGC	9 cut(s)	183, 470, 719, 1025, 1096, 1396, 1529, 1799, 2064
MabI	ACCWGGT	1 cut(s)	1855
MaeI	CTAG	1 cut(s)	968
MaeII	ACGT	2 cut(s)	1522, 2431
MaeIII	GTNAC	5 cut(s)	293, 653, 1565, 1610, 1772
MalI	GATC	9 cut(s)	401, 570, 677, 752, 849, 1329, 1650, 2031, 2211
MboI	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
MfeI	CAATTG	1 cut(s)	503
MflI	RGATCY	1 cut(s)	2029
MhlI	GDGCHC	5 cut(s)	336, 549, 631, 1711, 1966
MlsI	TGGCCA	2 cut(s)	1323, 1527
MluNI	TGGCCA	2 cut(s)	1323, 1527
Mly113I	GGCGCC	1 cut(s)	77
MlyI	GAGTC	2 cut(s)	141, 1081
MmeI	TCCRAC	6 cut(s)	48, 65, 1210, 1733, 1882, 2330
Mox20I	TGGCCA	2 cut(s)	1323, 1527
Mph1103I	ATGCAT	5 cut(s)	243, 561, 940, 1641, 2051
MroI	TCCGGA	1 cut(s)	1600
MroXI	GAANNNNTTC	1 cut(s)	2398
MscI	TGGCCA	2 cut(s)	1323, 1527
MslI	CAYNNNNRTG	6 cut(s)	564, 589, 858, 1254, 1634, 1644
Msp20I	TGGCCA	2 cut(s)	1323, 1527
MspA1I	CMGCKG	2 cut(s)	1102, 1409
MspCI	CTTAAG	1 cut(s)	341
MspI	CCGG	5 cut(s)	80, 180, 193, 724, 1601
MspR9I	CCNGG	8 cut(s)	81, 119, 180, 193, 759, 1266, 1839, 1857
MunI	CAATTG	1 cut(s)	503
Mva1269I	GAATGC	3 cut(s)	1205, 2051, 2300
MvaI	CCWGG	5 cut(s)	119, 759, 1266, 1839, 1857
MvnI	CGCG	1 cut(s)	1279
MwoI	GCNNNNNNNGC	6 cut(s)	458, 514, 1706, 1715, 2046, 2297
NarI	GGCGCC	1 cut(s)	77
NciI	CCSGG	3 cut(s)	81, 180, 193
NcoI	CCATGG	1 cut(s)	1502
NdeII	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
NmeAIII	GCCGAG	1 cut(s)	463
NmuCI	GTSAC	4 cut(s)	293, 653, 1565, 1610
NsiI	ATGCAT	5 cut(s)	243, 561, 940, 1641, 2051
NspI	RCATGY	2 cut(s)	241, 1013
OliI	CACNNNNGTG	2 cut(s)	589, 1254
PaeI	GCATGC	1 cut(s)	241
PagI	TCATGA	1 cut(s)	2083
PctI	GAATGC	3 cut(s)	1205, 2051, 2300
PdmI	GAANNNNTTC	1 cut(s)	2398
PfeI	GAWTC	5 cut(s)	964, 1429, 1462, 2218, 2412
PflFI	GACNNNGTC	1 cut(s)	1616
PflMI	CCANNNNNTGG	1 cut(s)	1330
PfoI	TCCNGGA	1 cut(s)	757
PleI	GAGTC	2 cut(s)	141, 1081
PluTI	GGCGCC	1 cut(s)	80
PmaCI	CACGTG	1 cut(s)	1523
PmlI	CACGTG	1 cut(s)	1523
PpsI	GAGTC	2 cut(s)	141, 1081
Ppu21I	YACGTR	1 cut(s)	1523
Psp124BI	GAGCTC	2 cut(s)	631, 1711
Psp6I	CCWGG	5 cut(s)	117, 757, 1264, 1837, 1855
PspCI	CACGTG	1 cut(s)	1523
PspFI	CCCAGC	1 cut(s)	1959
PspGI	CCWGG	5 cut(s)	117, 757, 1264, 1837, 1855
PspPI	GGNCC	6 cut(s)	91, 182, 410, 831, 1333, 1490
PstI	CTGCAG	2 cut(s)	1414, 2025
PstNI	CAGNNNCTG	1 cut(s)	2280
PsuI	RGATCY	1 cut(s)	2029
PsyI	GACNNNGTC	1 cut(s)	1616
PvuII	CAGCTG	2 cut(s)	1102, 1409
RsaI	GTAC	8 cut(s)	208, 230, 302, 1137, 1294, 1454, 1575, 2451
RsaNI	GTAC	8 cut(s)	207, 229, 301, 1136, 1293, 1453, 1574, 2450
RseI	CAYNNNNRTG	6 cut(s)	564, 589, 858, 1254, 1634, 1644
SacI	GAGCTC	2 cut(s)	631, 1711
Sau3AI	GATC	9 cut(s)	399, 568, 675, 750, 847, 1327, 1648, 2029, 2209
Sau96I	GGNCC	6 cut(s)	91, 182, 410, 831, 1333, 1490
SchI	GAGTC	2 cut(s)	141, 1081
ScrFI	CCNGG	8 cut(s)	81, 119, 180, 193, 759, 1266, 1839, 1857
SduI	GDGCHC	5 cut(s)	336, 549, 631, 1711, 1966
SexAI	ACCWGGT	1 cut(s)	1855
SfcI	CTRYAG	3 cut(s)	1410, 1867, 2021
SfoI	GGCGCC	1 cut(s)	78
SinI	GGWCC	2 cut(s)	91, 831
SmiMI	CAYNNNNRTG	6 cut(s)	564, 589, 858, 1254, 1634, 1644
SmlI	CTYRAG	1 cut(s)	341
SmoI	CTYRAG	1 cut(s)	341
SphI	GCATGC	1 cut(s)	241
SsiI	CCGC	6 cut(s)	63, 669, 879, 949, 1160, 2092
SspDI	GGCGCC	1 cut(s)	76
SspI	AATATT	2 cut(s)	493, 1726
SspMI	CTAG	1 cut(s)	968
SstI	GAGCTC	2 cut(s)	631, 1711
StyD4I	CCNGG	8 cut(s)	79, 117, 178, 191, 757, 1264, 1837, 1855
StyI	CCWWGG	3 cut(s)	210, 422, 1502
TaaI	ACNGT	5 cut(s)	142, 1228, 1244, 1886, 2326
TaiI	ACGT	2 cut(s)	1525, 2434
TaqI	TCGA	3 cut(s)	129, 574, 2159
TatI	WGTACW	4 cut(s)	228, 1292, 1452, 1573
TauI	GCSGC	1 cut(s)	882
TfiI	GAWTC	5 cut(s)	964, 1429, 1462, 2218, 2412
TscAI	CASTG	6 cut(s)	341, 638, 685, 1261, 1825, 2340
TseFI	GTSAC	4 cut(s)	293, 653, 1565, 1610
TseI	GCWGC	9 cut(s)	196, 458, 707, 1013, 1109, 1409, 1517, 1787, 2077
Tsp45I	GTSAC	4 cut(s)	293, 653, 1565, 1610
TspDTI	ATGAA	9 cut(s)	870, 1314, 1409, 1577, 1734, 1811, 2079, 2192, 2404
TspGWI	ACGGA	1 cut(s)	2021
TspRI	CASTG	6 cut(s)	341, 638, 685, 1261, 1825, 2340
Tth111I	GACNNNGTC	1 cut(s)	1616
Van91I	CCANNNNNTGG	1 cut(s)	1330
Vha464I	CTTAAG	1 cut(s)	341
VneI	GTGCAC	1 cut(s)	332
VpaK11BI	GGWCC	2 cut(s)	91, 831
XapI	RAATTY	5 cut(s)	524, 1508, 1892, 2165, 2398
XbaI	TCTAGA	1 cut(s)	967
XceI	RCATGY	2 cut(s)	241, 1013
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1500
XmiI	GTMKAC	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	2398
XspI	CTAG	1 cut(s)	968
Zsp2I	ATGCAT	5 cut(s)	243, 561, 940, 1641, 2051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.