Rmu_sc0037186.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0037186.1
Physical Location & Seq
Forward (+)
159 .. 3023
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0037186.1_g000001.1.cds

Sequence Viewer

Length: 1401 bp
atgatgggtggtgacttgttatcattggtgcttctggtgcttctgggtttgtgtgttaatggcgagccgggtatgccaccgggtcggagggtccatactctgttctcggtggagtgtcaggactacttcgactggcagactgtgggcctgatgcacagcttcaggaaggcccggcaacccggcccgattacccgactgctcagctgcaccgacgaggagaagaagaagtacagagggatgcatttggctccaacttttgaggtgccttctatgagtaggcacccaaagactggtgattggtatcctgccattaacaaacctgctggagttgtgcactggcttaagcatagtaaagaagctaagaatgttgattgggttgtgatactggatgcagacatgatcatacgggggccgattgttccttgggaacttggtgccgagaaaggctatgctgtggcagcatattatgggtatttgattggatgcaataatattctggctcaattgcatacaaagcacccagaattttgtgataaagttggtgggctcttagcaatgcatatagatgatcttcgagcattggcacctatgtggctttcaaaaacagaagaagtgcgagaagatagagctcactggggaactaatataactggtgacatttattcaagcggatggatcagtgagatgtatggatactcttttggtgcagcagaggttggtcttcggcacaaaataaatgataacttgatgatctatccaggatatattccacaagagggtgttgtgcctattcttcttcactatggcttgccatttagcgtgggaaattggtcctttagtaaattagatcaccatgaagatggtattgtttatgactgcggccgtctctttcctgaacctccttatccaaaagaggttaaactgatggagccagatgcacataaaaggcgaggtctctttttgaatctagagtgcattaacactttgaatgagggacttttacttcaacatgcagcaaatggttgcgctaagccaaagtggtcaaaatacatgagctttctgaaaagcaaaacttttgctgagctgactcgaccaaaacagctgactgctgccactttaggaattgaggagaaggtacaggctgtacagcagcaggttgtagatgaacctgtgaagccatatccaaaaatccacactttattttccacagaatgcaccccttacttcgattggcagactgttggacttgtccacagttttcacctcagtggacagcctggaaatatcacgcgattactcagctgtactgatgaagacctgaagcagtatactggccatgatctggctccaacacattatgttccttccatgagccgacatccattaacgggcgattggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

466

Amino Acids

52.56

Weight (kDa)

6.51

Isoelectric Point (pI)

52.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 328, 1144
AccB1I GGYRCC 4 cut(s) 262, 279, 434, 583
AccB7I CCANNNNNTGG 2 cut(s) 290, 1342
AccI GTMKAC 1 cut(s) 1328
AccII CGCG 1 cut(s) 1291
AciI CCGC 2 cut(s) 669, 879
AclWI GGATC 1 cut(s) 683
AcoI YGGCCR 2 cut(s) 880, 1333
AcsI RAATTY 1 cut(s) 524
AcuI CTGAAG 2 cut(s) 145, 1340
AfaI GTAC 4 cut(s) 230, 1137, 1146, 1306
AfiI CCNNNNNNNGG 4 cut(s) 290, 776, 1342, 1388
AflII CTTAAG 1 cut(s) 341
AgsI TTSAA 5 cut(s) 600, 666, 964, 988, 1007
AjnI CCWGG 2 cut(s) 757, 1276
AleI CACNNNNGTG 2 cut(s) 589, 1266
AluBI AGCT 8 cut(s) 159, 204, 359, 629, 1056, 1084, 1102, 1302
AluI AGCT 8 cut(s) 159, 204, 359, 629, 1056, 1084, 1102, 1302
Alw21I GWGCWC 2 cut(s) 336, 631
Alw26I GTCTC 2 cut(s) 890, 959
Alw44I GTGCAC 1 cut(s) 332
AlwI GGATC 1 cut(s) 683
AoxI GGCC 6 cut(s) 145, 168, 181, 410, 880, 1333
ApaLI GTGCAC 1 cut(s) 332
ApeKI GCWGC 6 cut(s) 204, 458, 707, 1013, 1109, 1150
ApoI RAATTY 1 cut(s) 524
AspLEI GCGC 1 cut(s) 1028
AspS9I GGNCC 6 cut(s) 91, 145, 169, 182, 410, 831
AsuC2I CCSGG 4 cut(s) 69, 81, 172, 180
AsuHPI GGTGA 5 cut(s) 23, 305, 665, 842, 1253
AvaII GGWCC 2 cut(s) 91, 831
BaeGI GKGCMC 1 cut(s) 336
BalI TGGCCA 1 cut(s) 1335
BanI GGYRCC 4 cut(s) 262, 279, 434, 583
BanII GRGCYC 2 cut(s) 549, 631
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
BbsI GAAGAC 2 cut(s) 713, 1320
Bbv12I GWGCWC 2 cut(s) 336, 631
BbvI GCAGC 6 cut(s) 191, 470, 719, 1025, 1096, 1162
BccI CCATC 3 cut(s) 666, 854, 919
BceAI ACGGC 1 cut(s) 867
BciT130I CCWGG 2 cut(s) 759, 1278
BciVI GTATCC 2 cut(s) 312, 686
BclI TGATCA 1 cut(s) 399
BcnI CCSGG 4 cut(s) 69, 81, 172, 180
BcoDI GTCTC 2 cut(s) 890, 959
BfaI CTAG 1 cut(s) 968
BfrI CTTAAG 1 cut(s) 341
BfuAI ACCTGC 2 cut(s) 328, 1144
BfuI GTATCC 2 cut(s) 312, 686
BisI GCNGC 7 cut(s) 205, 459, 708, 880, 1014, 1110, 1151
BlpI GCTNAGC 3 cut(s) 200, 1029, 1080
BlsI GCNGC 7 cut(s) 206, 460, 709, 881, 1015, 1111, 1152
Bme1390I CCNGG 6 cut(s) 69, 81, 172, 180, 759, 1278
Bme18I GGWCC 2 cut(s) 91, 831
BmgT120I GGNCC 6 cut(s) 91, 145, 169, 182, 410, 831
BmiI GGNNCC 9 cut(s) 92, 249, 264, 281, 411, 436, 585, 930, 1347
BmrFI CCNGG 6 cut(s) 69, 81, 172, 180, 759, 1278
BmrI ACTGGG 1 cut(s) 643
BmsI GCATC 5 cut(s) 141, 228, 379, 473, 925
BmuI ACTGGG 1 cut(s) 643
BpiI GAAGAC 2 cut(s) 713, 1320
BpmI CTGGAG 1 cut(s) 345
Bpu1102I GCTNAGC 3 cut(s) 200, 1029, 1080
BpuMI CCSGG 4 cut(s) 69, 81, 172, 180
BsaBI GATNNNNATC 1 cut(s) 300
BsaI GGTCTC 1 cut(s) 959
BsaJI CCNNGG 1 cut(s) 422
Bsc4I CCNNNNNNNGG 4 cut(s) 290, 776, 1342, 1388
Bse1I ACTGG 7 cut(s) 137, 295, 341, 390, 638, 655, 1336
Bse3DI GCAATG 1 cut(s) 561
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 2 cut(s) 759, 1278
BseDI CCNNGG 1 cut(s) 422
BseGI GGATG 5 cut(s) 243, 394, 488, 677, 1378
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 4 cut(s) 290, 776, 1342, 1388
BseMI GCAATG 1 cut(s) 561
BseMII CTCAG 4 cut(s) 214, 1071, 1279, 1312
BseNI ACTGG 7 cut(s) 137, 295, 341, 390, 638, 655, 1336
BseRI GAGGAG 2 cut(s) 230, 1142
BseSI GKGCMC 1 cut(s) 336
BseX3I CGGCCG 1 cut(s) 880
BseXI GCAGC 6 cut(s) 191, 470, 719, 1025, 1096, 1162
BsgI GTGCAG 2 cut(s) 190, 726
Bsh1236I CGCG 1 cut(s) 1291
Bsh1285I CGRYCG 1 cut(s) 883
BshFI GGCC 6 cut(s) 147, 170, 183, 412, 882, 1335
BshNI GGYRCC 4 cut(s) 262, 279, 434, 583
BsiEI CGRYCG 1 cut(s) 883
BsiHKAI GWGCWC 2 cut(s) 336, 631
BsiSI CCGG 4 cut(s) 68, 80, 172, 180
BslFI GGGAC 1 cut(s) 1008
BslI CCNNNNNNNGG 4 cut(s) 290, 776, 1342, 1388
BsmAI GTCTC 2 cut(s) 890, 959
BsmBI CGTCTC 1 cut(s) 890
BsmFI GGGAC 1 cut(s) 1008
BsmI GAATGC 1 cut(s) 1217
BsnI GGCC 6 cut(s) 147, 170, 183, 412, 882, 1335
Bso31I GGTCTC 1 cut(s) 959
Bsp1286I GDGCHC 3 cut(s) 336, 549, 631
Bsp1407I TGTACA 1 cut(s) 1144
Bsp143I GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
Bsp1720I GCTNAGC 3 cut(s) 200, 1029, 1080
BspACI CCGC 2 cut(s) 669, 879
BspANI GGCC 6 cut(s) 147, 170, 183, 412, 882, 1335
BspCNI CTCAG 4 cut(s) 213, 1072, 1278, 1311
BspFNI CGCG 1 cut(s) 1291
BspLI GGNNCC 9 cut(s) 92, 249, 264, 281, 411, 436, 585, 930, 1347
BspMI ACCTGC 2 cut(s) 328, 1144
BspPI GGATC 1 cut(s) 683
BspT107I GGYRCC 4 cut(s) 262, 279, 434, 583
BspTI CTTAAG 1 cut(s) 341
BspTNI GGTCTC 1 cut(s) 959
BsrDI GCAATG 1 cut(s) 561
BsrGI TGTACA 1 cut(s) 1144
BsrI ACTGG 7 cut(s) 137, 295, 341, 390, 638, 655, 1336
BssECI CCNNGG 1 cut(s) 422
BssMI GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
BssNAI GTATAC 1 cut(s) 1329
BssT1I CCWWGG 1 cut(s) 422
Bst1107I GTATAC 1 cut(s) 1329
Bst2UI CCWGG 2 cut(s) 759, 1278
Bst4CI ACNGT 3 cut(s) 142, 1240, 1256
BstAFI CTTAAG 1 cut(s) 341
BstAUI TGTACA 1 cut(s) 1144
BstC8I GCNNGC 2 cut(s) 65, 809
BstDEI CTNAG 7 cut(s) 200, 360, 550, 1029, 1080, 1265, 1298
BstF5I GGATG 5 cut(s) 243, 394, 488, 677, 1378
BstFNI CGCG 1 cut(s) 1291
BstHHI GCGC 1 cut(s) 1028
BstKTI GATC 6 cut(s) 402, 571, 678, 753, 850, 1342
BstMAI GTCTC 2 cut(s) 890, 959
BstMBI GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
BstMCI CGRYCG 1 cut(s) 883
BstMWI GCNNNNNNNGC 4 cut(s) 37, 73, 458, 514
BstNI CCWGG 2 cut(s) 759, 1278
BstNSI RCATGY 1 cut(s) 1013
BstSCI CCNGG 6 cut(s) 67, 79, 170, 178, 757, 1276
BstSLI GKGCMC 1 cut(s) 336
BstUI CGCG 1 cut(s) 1291
BstV1I GCAGC 6 cut(s) 191, 470, 719, 1025, 1096, 1162
BstV2I GAAGAC 2 cut(s) 713, 1320
BstXI CCANNNNNNTGG 1 cut(s) 860
BstZ17I GTATAC 1 cut(s) 1329
BstZI CGGCCG 1 cut(s) 880
BsuI GTATCC 2 cut(s) 312, 686
BsuRI GGCC 6 cut(s) 147, 170, 183, 412, 882, 1335
BtsCI GGATG 5 cut(s) 243, 394, 488, 677, 1378
BtsIMutI CAGTG 4 cut(s) 334, 631, 685, 1273
BveI ACCTGC 2 cut(s) 328, 1144
Cac8I GCNNGC 2 cut(s) 65, 809
CfoI GCGC 1 cut(s) 1028
Cfr13I GGNCC 6 cut(s) 91, 145, 169, 182, 410, 831
Csp6I GTAC 4 cut(s) 229, 1136, 1145, 1305
CviAII CATG 6 cut(s) 397, 854, 1010, 1051, 1337, 1369
CviQI GTAC 4 cut(s) 229, 1136, 1145, 1305
DdeI CTNAG 7 cut(s) 200, 360, 550, 1029, 1080, 1265, 1298
DpnI GATC 6 cut(s) 401, 570, 677, 752, 849, 1341
DpnII GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
EaeI YGGCCR 2 cut(s) 880, 1333
EagI CGGCCG 1 cut(s) 880
Ecl136II GAGCTC 1 cut(s) 629
EclXI CGGCCG 1 cut(s) 880
Eco130I CCWWGG 1 cut(s) 422
Eco24I GRGCYC 2 cut(s) 549, 631
Eco31I GGTCTC 1 cut(s) 959
Eco47I GGWCC 2 cut(s) 91, 831
Eco52I CGGCCG 1 cut(s) 880
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 145, 1340
EcoICRI GAGCTC 1 cut(s) 629
EcoRII CCWGG 2 cut(s) 757, 1276
EcoT14I CCWWGG 1 cut(s) 422
EcoT22I ATGCAT 2 cut(s) 243, 561
EcoT38I GRGCYC 2 cut(s) 549, 631
ErhI CCWWGG 1 cut(s) 422
Esp3I CGTCTC 1 cut(s) 890
FaeI CATG 6 cut(s) 400, 857, 1013, 1054, 1340, 1372
FalI AAGNNNNNCTT 2 cut(s) 1057, 1089
FaqI GGGAC 1 cut(s) 1008
FatI CATG 6 cut(s) 396, 853, 1009, 1050, 1336, 1368
FbaI TGATCA 1 cut(s) 399
FblI GTMKAC 1 cut(s) 1328
Fnu4HI GCNGC 7 cut(s) 205, 459, 708, 880, 1014, 1110, 1151
FokI GGATG 5 cut(s) 250, 401, 495, 684, 1365
FriOI GRGCYC 2 cut(s) 549, 631
Fsp4HI GCNGC 7 cut(s) 205, 459, 708, 880, 1014, 1110, 1151
FspBI CTAG 1 cut(s) 968
GlaI GCGC 1 cut(s) 1027
GluI GCNGC 7 cut(s) 205, 459, 708, 880, 1014, 1110, 1151
GsuI CTGGAG 1 cut(s) 345
HaeIII GGCC 6 cut(s) 147, 170, 183, 412, 882, 1335
HapII CCGG 4 cut(s) 68, 80, 172, 180
HhaI GCGC 1 cut(s) 1028
Hin1II CATG 6 cut(s) 400, 857, 1013, 1054, 1340, 1372
Hin6I GCGC 1 cut(s) 1026
HinP1I GCGC 1 cut(s) 1026
HinfI GANTC 2 cut(s) 964, 1087
HpaII CCGG 4 cut(s) 68, 80, 172, 180
HphI GGTGA 5 cut(s) 23, 305, 665, 842, 1253
Hpy166II GTNNAC 4 cut(s) 334, 1252, 1271, 1329
Hpy188I TCNGA 2 cut(s) 87, 1062
Hpy188III TCNNGA 4 cut(s) 119, 163, 893, 968
Hpy8I GTNNAC 4 cut(s) 334, 1252, 1271, 1329
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 4 cut(s) 160, 276, 1126, 1374
HpyCH4III ACNGT 3 cut(s) 142, 1240, 1256
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 73, 458, 514
HpyF3I CTNAG 7 cut(s) 200, 360, 550, 1029, 1080, 1265, 1298
Hsp92II CATG 6 cut(s) 400, 857, 1013, 1054, 1340, 1372
HspAI GCGC 1 cut(s) 1026
Ksp22I TGATCA 1 cut(s) 399
Kzo9I GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
LmnI GCTCC 3 cut(s) 253, 928, 1351
Lsp1109I GCAGC 6 cut(s) 191, 470, 719, 1025, 1096, 1162
LweI GCATC 5 cut(s) 141, 228, 379, 473, 925
MaeI CTAG 1 cut(s) 968
MaeIII GTNAC 2 cut(s) 11, 653
MalI GATC 6 cut(s) 401, 570, 677, 752, 849, 1341
MboI GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
MfeI CAATTG 1 cut(s) 503
MhlI GDGCHC 3 cut(s) 336, 549, 631
MlsI TGGCCA 1 cut(s) 1335
MluCI AATT 5 cut(s) 503, 524, 826, 842, 1122
MluNI TGGCCA 1 cut(s) 1335
MlyI GAGTC 1 cut(s) 1081
MmeI TCCRAC 4 cut(s) 65, 275, 1222, 1373
Mox20I TGGCCA 1 cut(s) 1335
Mph1103I ATGCAT 2 cut(s) 243, 561
MscI TGGCCA 1 cut(s) 1335
MseI TTAA 6 cut(s) 57, 312, 342, 918, 978, 1385
MslI CAYNNNNRTG 4 cut(s) 564, 589, 858, 1266
Msp20I TGGCCA 1 cut(s) 1335
MspA1I CMGCKG 3 cut(s) 204, 1102, 1302
MspCI CTTAAG 1 cut(s) 341
MspI CCGG 4 cut(s) 68, 80, 172, 180
MspR9I CCNGG 6 cut(s) 69, 81, 172, 180, 759, 1278
MunI CAATTG 1 cut(s) 503
Mva1269I GAATGC 1 cut(s) 1217
MvaI CCWGG 2 cut(s) 759, 1278
MvnI CGCG 1 cut(s) 1291
MwoI GCNNNNNNNGC 4 cut(s) 37, 73, 458, 514
NciI CCSGG 4 cut(s) 69, 81, 172, 180
NdeII GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
NlaIII CATG 6 cut(s) 400, 857, 1013, 1054, 1340, 1372
NlaIV GGNNCC 9 cut(s) 92, 249, 264, 281, 411, 436, 585, 930, 1347
NmeAIII GCCGAG 1 cut(s) 463
NmuCI GTSAC 2 cut(s) 11, 653
NsiI ATGCAT 2 cut(s) 243, 561
NspI RCATGY 1 cut(s) 1013
OliI CACNNNNGTG 2 cut(s) 589, 1266
PctI GAATGC 1 cut(s) 1217
PfeI GAWTC 1 cut(s) 964
PflMI CCANNNNNTGG 2 cut(s) 290, 1342
PfoI TCCNGGA 1 cut(s) 757
PkrI GCNGC 7 cut(s) 206, 460, 709, 881, 1015, 1111, 1152
PleI GAGTC 1 cut(s) 1081
PpsI GAGTC 1 cut(s) 1081
Psp124BI GAGCTC 1 cut(s) 631
Psp6I CCWGG 2 cut(s) 757, 1276
PspGI CCWGG 2 cut(s) 757, 1276
PspN4I GGNNCC 9 cut(s) 92, 249, 264, 281, 411, 436, 585, 930, 1347
PspPI GGNCC 6 cut(s) 91, 145, 169, 182, 410, 831
PvuII CAGCTG 3 cut(s) 204, 1102, 1302
RsaI GTAC 4 cut(s) 230, 1137, 1146, 1306
RsaNI GTAC 4 cut(s) 229, 1136, 1145, 1305
RseI CAYNNNNRTG 4 cut(s) 564, 589, 858, 1266
SacI GAGCTC 1 cut(s) 631
SaqAI TTAA 6 cut(s) 57, 312, 342, 918, 978, 1385
SatI GCNGC 7 cut(s) 205, 459, 708, 880, 1014, 1110, 1151
Sau3AI GATC 6 cut(s) 399, 568, 675, 750, 847, 1339
Sau96I GGNCC 6 cut(s) 91, 145, 169, 182, 410, 831
SchI GAGTC 1 cut(s) 1081
ScrFI CCNGG 6 cut(s) 69, 81, 172, 180, 759, 1278
SduI GDGCHC 3 cut(s) 336, 549, 631
SfaNI GCATC 5 cut(s) 141, 228, 379, 473, 925
SinI GGWCC 2 cut(s) 91, 831
SmiMI CAYNNNNRTG 4 cut(s) 564, 589, 858, 1266
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
Sse9I AATT 5 cut(s) 503, 524, 826, 842, 1122
SsiI CCGC 2 cut(s) 669, 879
SspI AATATT 1 cut(s) 493
SspMI CTAG 1 cut(s) 968
SstI GAGCTC 1 cut(s) 631
StyD4I CCNGG 6 cut(s) 67, 79, 170, 178, 757, 1276
StyI CCWWGG 1 cut(s) 422
TaaI ACNGT 3 cut(s) 142, 1240, 1256
TaqI TCGA 4 cut(s) 129, 574, 1090, 1227
TasI AATT 5 cut(s) 503, 524, 826, 842, 1122
TatI WGTACW 3 cut(s) 228, 1144, 1304
TauI GCSGC 1 cut(s) 882
TfiI GAWTC 1 cut(s) 964
Tru1I TTAA 6 cut(s) 57, 312, 342, 918, 978, 1385
Tru9I TTAA 6 cut(s) 57, 312, 342, 918, 978, 1385
TscAI CASTG 4 cut(s) 341, 638, 685, 1273
TseFI GTSAC 2 cut(s) 11, 653
TseI GCWGC 6 cut(s) 204, 458, 707, 1013, 1109, 1150
Tsp45I GTSAC 2 cut(s) 11, 653
TspDTI ATGAA 3 cut(s) 870, 1179, 1326
TspRI CASTG 4 cut(s) 341, 638, 685, 1273
Van91I CCANNNNNTGG 2 cut(s) 290, 1342
Vha464I CTTAAG 1 cut(s) 341
VneI GTGCAC 1 cut(s) 332
VpaK11BI GGWCC 2 cut(s) 91, 831
XapI RAATTY 1 cut(s) 524
XbaI TCTAGA 1 cut(s) 967
XceI RCATGY 1 cut(s) 1013
XmiI GTMKAC 1 cut(s) 1328
XspI CTAG 1 cut(s) 968
Zsp2I ATGCAT 2 cut(s) 243, 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.