Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004339

Physical Location & Seq

Genomic Coordinates Forward (+)

1472674 .. 1477134

Gene Structure 4461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1018800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGCCGGATTCTTGGTCTTGGTGGCGGCGGCGTTGGTGGGTCTGTGCATTGATGGCAGTTGGGTGTCGGAGGCGGGTCGGGAGGCTCCGGGAACGAAGGCAAGGAGGGTCCACACGCTGTTCTCGGTGGAGTGCCAGAACTACTTCGACTGGCAGACTGTCGGGTTGATGCACAGCTACCGGAAAGCCCGGCAACCTGGCCCGATTACCCGGCTCCTCAGCTGCACCGACGACGAGAAGAAGAAGTACAAAGGGATGCATTTGGCTCCCACTTTTGAGGTTCCTTCCATGAGCCGGCACCCAAAAACTGGCGACTGGTACCCTGCAATTAACAAACCAGCTGGAGTTGTGCACTGGCTTAAGCACAGCAAGGAGGCTGAGAATGTTGATTGGGTTGTGATTCTGGATGCTGACATGATTATCCGCGGGCCGATTGTTCCTTGGGAACTTGGTGCTGAGAAAGGCAAGCCTGTTGCAGCATATTATGGGTACTTGGTTGGATGCGATAATCTTCTCGCTCGACTGCACACAAAGCACCCTGAACTCTGCGATAAAGTTGGTGGGCTTTTGGCCATGCATATAGATGATCTTCGAGCATTGGCACCCGTGTGGCTTTCGAAAACAGAAGAAGTGCGGGAAGATAGAGCTCACTGGTCAACTAATATAACTGGTGACATCTATGGGAAAGGATGGATCAGTGAGATGTATGGATATTCTTTTGGTGCAGCAGAGGTAGGTCTTCAGCACAAAATAAATAATAACTTGATGATCTACCCAGGCTATACTCCACAAGAGGGTGTTGTGCCTATTCTTCTTCACTACGGCTTGTCATTTAGCGTAGGGAATTGGTCTTTTAGAAAATTAGATCACCACGAGGACGCTATTGTTTATGACTGTGGCCGACTCTTTCCTGAGCCTCCATATCCAAAAGAGGTAAATATGATGGAACCTGATAAAAATAAAAGGCGGGCTCTTATGTTGAATTTAGAGTGCATTAACACTTTAAATCAGGGTCTTTTACTACAACATGCAGCAAATGGTTGCCCAAAGCCAAAGTGGACAAAATACACGAGCTTTCTGAAAAGCAAAACTTTTGCCGAACTGACTCGGCCAAAACAGCTGACTGCTGCTACTTTACGATTCGAGGAGCCAGTACATGTAGTACAGGAAGTGCAGCAGGAGGTTGTCGATGAACCTGGAAAGCCATATCCAAAAATCCACACCCTTTTTTCTACAGAATGCACCCCTTACTTTGATTGGCAGACTGTAGGACTTGTCCACAGTTTTCACCTGAGTGGCCAGCCTGGAAATATCACACGATTACTCAGCTGTACGGATGAAGACTTGAAGCAATATGCTGGGCATGATCTGGCTCCCACCCATTATGTTCCTTCCATGAGCCGACATCCATTAACGGGTGATTGGTATCCAGCAATTAACAAACCAGCTGCAGTCCTTCATTGGCTCAATCATGCAAATACGGATGCAGAATACATAGTGATTCTTGATGCTGATATGATCTTGAGGGGTCCAATTACCCCATGGGAATTCAAAGCAGCACGTGGCCAACCAGTTTCGACTCCCTATGGCTATCTTATCGGCTGTGACAATGAGCTTGCAAAACTCCATACTCGACATCCTGAAGCCTGTGACAAGGTTGGGGGTGTTATCATCATGCATATAGATGATCTTAGAAAGTTTGCTCTACTGTGGTTGCACAAAACTGAGGAAGTGCGGGCAGACACAGCTCATTATGCCACAAATATCACTGGAGATATATATGCATCTGGTTGGATCAGTGAGATGTATGGTTACTCATTCGGAGCAGCAGAGTTGAAACTACGGCATCAAATAAGCAGCGAGATACTGATATACCCGGGGTATGCTCCTGCACCAGGCATCAAATACAGAGTATTCCACTACGGTTTGGAATTCAAGGTTGGAAACTGGAGCTTTGATAAAGCAAAATGGAGGAATGTCGATGTGGTTAACAAGTGCTGGGCCCAGTTTCCAGACCCACCCGACCCTTCAACACTCGACCAGACAGACAAGAACAAACTGCCGACAGATCTACTTAGCCTAGAATGCATAAAGACACTAAATGAAGCGTTACACCTTCATCACAAGCGAAGGAACTGTCCCGATCCAAACTCAGATGTAGCAGAACAAGTTGTAGTATCAAGGAAACTCGGTAAGTTGGAAGGAAGTTTTGGCCTAGGAAGCAACCGTGTCCAAACAGATCATTCCGAGGAGATTCCAGAACCTACATTGACTGATGGGATGTTTAGTTCTGTGAGGTTCTTGGTTATTGCTCTATGGGCATTCTGTGGCTTGGGCTTCTTGACGATCGCGTGGGTGCTGTTTTCAGGTCGTAAAGGGAAAGGTAAAAGAGGTAAAAGTTATAGAATTAAGAGAAGAAATTCTGGTACAGGATTTATGGATATTAGCAGCCGTGATAGGCATTTACGTGGAGTTGAAGTACCTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

No domains found.

Protein Analysis

830

Amino Acids

93.44

Weight (kDa)

7.63

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HPAT	PF23452	38 - 266	3.7e-20	Hydroxyproline O-arabinosyltransferase family
HPAT	PF23452	408 - 663	2.2e-18	Hydroxyproline O-arabinosyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01720
fragaria_vesca	FvH4_6g52410
malus_domestica	MD04G1153000.v1.1 MD08G1068600.v1.1 MD09G1018400.v1.1 MD16G1283700.v1.1 MD17G1018800.v1.1
prunus_persica	Prupe.3G298800_v2.0.a1
pyrus_communis	pycom111g01530 pycom15g31850 pycom17g01550 pycom17g01560
rosa_chinensis	RchiOBHm_Chr2g0174041 RchiOBHm_Chr2g0174051
rosa_laevigata	RLG00000022239 RLG00000022240
rosa_multiflora	Rmu_co8300129.1_g000001 Rmu_co8470913.1_g000001 Rmu_sc0037186.1_g000001
rosa_roxburghii	Rroxscaffold_2G00078500 Rroxscaffold_2G00078510
rosa_rugosa	Rorug02G0574200
rosa_samantha	Rh2AG643300 Rh2AG653400 Rh2AG653600 Rh2BG664700 Rh2BG664900 Rh2CG629100 Rh2CG629200 Rh2DG679500 Rh2DG679600
rosa_wichuraiana	Rw2G053670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	318
AccB1I	GGYRCC	3 cut(s)	297, 318, 601
AccB7I	CCANNNNNTGG	1 cut(s)	308
AccII	CGCG	2 cut(s)	426, 2351
AciI	CCGC	8 cut(s)	26, 29, 74, 424, 426, 634, 967, 1735
AclWI	GGATC	3 cut(s)	701, 1802, 2138
AcoI	YGGCCR	6 cut(s)	3, 570, 898, 1109, 1297, 1564
AcsI	RAATTY	4 cut(s)	982, 1547, 1931, 2419
AcuI	CTGAAG	2 cut(s)	725, 1662
AcvI	CACGTG	1 cut(s)	1562
AfaI	GTAC	8 cut(s)	248, 320, 491, 1155, 1164, 1333, 2428, 2481
AfiI	CCNNNNNNNGG	5 cut(s)	294, 308, 794, 1415, 1895
AflII	CTTAAG	1 cut(s)	359
AflIII	ACRYGT	1 cut(s)	1156
AgsI	TTSAA	7 cut(s)	982, 1348, 1552, 1837, 1936, 2031, 2477
AjnI	CCWGG	5 cut(s)	196, 775, 1195, 1303, 1894
AjuI	GAANNNNNNNTTGG	4 cut(s)	1923, 1955, 2193, 2225
AleI	CACNNNNGTG	2 cut(s)	607, 1293
AloI	GAACNNNNNNTCC	2 cut(s)	2272, 2304
Alw21I	GWGCWC	2 cut(s)	354, 649
Alw44I	GTGCAC	1 cut(s)	350
AlwI	GGATC	3 cut(s)	701, 1802, 2138
Ama87I	CYCGRG	1 cut(s)	1876
ApaI	GGGCCC	1 cut(s)	2005
ApaLI	GTGCAC	1 cut(s)	350
ApoI	RAATTY	4 cut(s)	982, 1547, 1931, 2419
ArsI	GACNNNNNNTTYG	2 cut(s)	2122, 2154
Asp700I	GAANNNNTTC	2 cut(s)	143, 2419
Asp718I	GGTACC	1 cut(s)	318
AspA2I	CCTAGG	1 cut(s)	2215
AspS9I	GGNCC	6 cut(s)	109, 200, 428, 1529, 2001, 2002
AsuC2I	CCSGG	5 cut(s)	90, 190, 211, 1877, 1878
AsuHPI	GGTGA	4 cut(s)	683, 860, 1280, 1430
AsuII	TTCGAA	1 cut(s)	617
AvaI	CYCGRG	1 cut(s)	1876
AvaII	GGWCC	2 cut(s)	109, 1529
AvrII	CCTAGG	1 cut(s)	2215
BaeGI	GKGCMC	2 cut(s)	354, 2005
BalI	TGGCCA	3 cut(s)	572, 1299, 1566
BanI	GGYRCC	3 cut(s)	297, 318, 601
BanII	GRGCYC	3 cut(s)	649, 973, 2005
BarI	GAAGNNNNNNTAC	2 cut(s)	230, 262
BauI	CACGAG	2 cut(s)	872, 1069
BbrPI	CACGTG	1 cut(s)	1562
BbsI	GAAGAC	2 cut(s)	731, 1347
Bbv12I	GWGCWC	2 cut(s)	354, 649
BbvCI	CCTCAGC	1 cut(s)	218
BccI	CCATC	4 cut(s)	47, 684, 937, 2270
BceAI	ACGGC	3 cut(s)	838, 1859, 2436
BciT130I	CCWGG	5 cut(s)	198, 777, 1197, 1305, 1896
BciVI	GTATCC	1 cut(s)	1437
BcnI	CCSGG	5 cut(s)	90, 190, 211, 1877, 1878
BfaI	CTAG	2 cut(s)	2081, 2216
BfmI	CTRYAG	3 cut(s)	1233, 1266, 1449
BfrI	CTTAAG	1 cut(s)	359
BfuI	GTATCC	1 cut(s)	1437
BglII	AGATCT	1 cut(s)	2068
BlnI	CCTAGG	1 cut(s)	2215
Bme18I	GGWCC	2 cut(s)	109, 1529
BmeT110I	CYCGRG	1 cut(s)	1876
BmgT120I	GGNCC	6 cut(s)	109, 200, 428, 1529, 2001, 2002
BmrI	ACTGGG	1 cut(s)	1999
BmsI	GCATC	9 cut(s)	159, 246, 397, 491, 1474, 1498, 1793, 1855, 1908
BmuI	ACTGGG	1 cut(s)	1999
BpiI	GAAGAC	2 cut(s)	731, 1347
BpmI	CTGGAG	3 cut(s)	363, 1791, 1969
Bpu10I	CCTNAGC	2 cut(s)	218, 912
Bpu14I	TTCGAA	1 cut(s)	617
BpuEI	CTTGAG	1 cut(s)	1543
BpuMI	CCSGG	5 cut(s)	90, 190, 211, 1877, 1878
BsaAI	YACGTR	2 cut(s)	1562, 2468
BsaBI	GATNNNNATC	1 cut(s)	1425
BsaJI	CCNNGG	8 cut(s)	424, 440, 775, 1541, 1876, 1877, 2215, 2247
BsaWI	WCCGGW	1 cut(s)	180
BsaXI	ACNNNNNCTCC	1 cut(s)	2463
Bsc4I	CCNNNNNNNGG	5 cut(s)	294, 308, 794, 1415, 1895
Bse118I	RCCGGY	1 cut(s)	294
Bse8I	GATNNNNATC	1 cut(s)	1425
BseBI	CCWGG	5 cut(s)	198, 777, 1197, 1305, 1896
BseDI	CCNNGG	8 cut(s)	424, 440, 775, 1541, 1876, 1877, 2215, 2247
BseGI	GGATG	9 cut(s)	261, 412, 506, 695, 1342, 1405, 1489, 1636, 2286
BseJI	GATNNNNATC	1 cut(s)	1425
BseLI	CCNNNNNNNGG	5 cut(s)	294, 308, 794, 1415, 1895
BseMII	CTCAG	8 cut(s)	232, 369, 447, 903, 1283, 1339, 1716, 2166
BseRI	GAGGAG	3 cut(s)	206, 1160, 2264
BseSI	GKGCMC	2 cut(s)	354, 2005
BseYI	CCCAGC	2 cut(s)	1358, 1998
BsgI	GTGCAG	5 cut(s)	208, 509, 744, 1193, 1875
Bsh1236I	CGCG	2 cut(s)	426, 2351
Bsh1285I	CGRYCG	1 cut(s)	2349
BshNI	GGYRCC	3 cut(s)	297, 318, 601
BsiEI	CGRYCG	1 cut(s)	2349
BsiHKAI	GWGCWC	2 cut(s)	354, 649
BsiHKCI	CYCGRG	1 cut(s)	1876
BsiSI	CCGG	7 cut(s)	6, 89, 181, 190, 211, 295, 1877
BslFI	GGGAC	1 cut(s)	2124
BslI	CCNNNNNNNGG	5 cut(s)	294, 308, 794, 1415, 1895
BsmFI	GGGAC	1 cut(s)	2124
BsmI	GAATGC	3 cut(s)	1244, 2090, 2321
BsoBI	CYCGRG	1 cut(s)	1876
Bsp119I	TTCGAA	1 cut(s)	617
Bsp120I	GGGCCC	1 cut(s)	2001
Bsp1286I	GDGCHC	4 cut(s)	354, 649, 973, 2005
Bsp19I	CCATGG	1 cut(s)	1541
BspACI	CCGC	8 cut(s)	26, 29, 74, 424, 426, 634, 967, 1735
BspCNI	CTCAG	8 cut(s)	231, 370, 448, 904, 1284, 1338, 1717, 2165
BspFNI	CGCG	2 cut(s)	426, 2351
BspMAI	CTGCAG	1 cut(s)	1453
BspPI	GGATC	3 cut(s)	701, 1802, 2138
BspT104I	TTCGAA	1 cut(s)	617
BspT107I	GGYRCC	3 cut(s)	297, 318, 601
BspTI	CTTAAG	1 cut(s)	359
BsrFI	RCCGGY	1 cut(s)	294
BssAI	RCCGGY	1 cut(s)	294
BssECI	CCNNGG	8 cut(s)	424, 440, 775, 1541, 1876, 1877, 2215, 2247
BssSI	CACGAG	2 cut(s)	872, 1069
BssT1I	CCWWGG	3 cut(s)	440, 1541, 2215
Bst2BI	CACGAG	2 cut(s)	872, 1069
Bst2UI	CCWGG	5 cut(s)	198, 777, 1197, 1305, 1896
Bst4CI	ACNGT	8 cut(s)	160, 896, 1267, 1283, 1710, 1925, 2138, 2228
BstAFI	CTTAAG	1 cut(s)	359
BstBAI	YACGTR	2 cut(s)	1562, 2468
BstBI	TTCGAA	1 cut(s)	617
BstC8I	GCNNGC	7 cut(s)	296, 428, 467, 969, 1301, 1617, 1737
BstDSI	CCRYGG	2 cut(s)	424, 1541
BstENI	CCTNNNNNAGG	1 cut(s)	1893
BstF5I	GGATG	9 cut(s)	261, 412, 506, 695, 1342, 1405, 1489, 1636, 2286
BstFNI	CGCG	2 cut(s)	426, 2351
BstMCI	CGRYCG	1 cut(s)	2349
BstMWI	GCNNNNNNNGC	8 cut(s)	54, 532, 1117, 1745, 1754, 2085, 2220, 2318
BstNI	CCWGG	5 cut(s)	198, 777, 1197, 1305, 1896
BstNSI	RCATGY	2 cut(s)	1031, 1160
BstSFI	CTRYAG	3 cut(s)	1233, 1266, 1449
BstSLI	GKGCMC	2 cut(s)	354, 2005
BstUI	CGCG	2 cut(s)	426, 2351
BstV2I	GAAGAC	2 cut(s)	731, 1347
BstX2I	RGATCY	1 cut(s)	2068
BstYI	RGATCY	1 cut(s)	2068
BsuI	GTATCC	1 cut(s)	1437
BtgI	CCRYGG	2 cut(s)	424, 1541
BtsCI	GGATG	9 cut(s)	261, 412, 506, 695, 1342, 1405, 1489, 1636, 2286
BtsIMutI	CAGTG	5 cut(s)	352, 649, 703, 1767, 1804
Cac8I	GCNNGC	7 cut(s)	296, 428, 467, 969, 1301, 1617, 1737
Cfr10I	RCCGGY	1 cut(s)	294
Cfr13I	GGNCC	6 cut(s)	109, 200, 428, 1529, 2001, 2002
Cfr42I	CCGCGG	1 cut(s)	427
Cfr9I	CCCGGG	1 cut(s)	1876
CseI	GACGC	1 cut(s)	887
Csp6I	GTAC	8 cut(s)	247, 319, 490, 1154, 1163, 1332, 2427, 2480
CviQI	GTAC	8 cut(s)	247, 319, 490, 1154, 1163, 1332, 2427, 2480
DraI	TTTAAA	1 cut(s)	1005
EaeI	YGGCCR	6 cut(s)	3, 570, 898, 1109, 1297, 1564
Ecl136II	GAGCTC	1 cut(s)	647
Eco130I	CCWWGG	3 cut(s)	440, 1541, 2215
Eco24I	GRGCYC	3 cut(s)	649, 973, 2005
Eco47I	GGWCC	2 cut(s)	109, 1529
Eco53kI	GAGCTC	1 cut(s)	647
Eco57I	CTGAAG	2 cut(s)	725, 1662
Eco72I	CACGTG	1 cut(s)	1562
Eco88I	CYCGRG	1 cut(s)	1876
EcoICRI	GAGCTC	1 cut(s)	647
EcoNI	CCTNNNNNAGG	1 cut(s)	1893
EcoRI	GAATTC	2 cut(s)	1547, 1931
EcoRII	CCWGG	5 cut(s)	196, 775, 1195, 1303, 1894
EcoT14I	CCWWGG	3 cut(s)	440, 1541, 2215
EcoT22I	ATGCAT	5 cut(s)	261, 579, 1680, 1786, 2090
EcoT38I	GRGCYC	3 cut(s)	649, 973, 2005
ErhI	CCWWGG	3 cut(s)	440, 1541, 2215
FalI	AAGNNNNNCTT	2 cut(s)	1075, 1107
FaqI	GGGAC	1 cut(s)	2124
FauI	CCCGC	5 cut(s)	67, 419, 627, 960, 1728
FokI	GGATG	9 cut(s)	268, 419, 513, 702, 1349, 1392, 1496, 1623, 2293
FriOI	GRGCYC	3 cut(s)	649, 973, 2005
FspBI	CTAG	2 cut(s)	2081, 2216
GsaI	CCCAGC	2 cut(s)	1362, 2002
GsuI	CTGGAG	3 cut(s)	363, 1791, 1969
HapII	CCGG	7 cut(s)	6, 89, 181, 190, 211, 295, 1877
HgaI	GACGC	1 cut(s)	887
HincII	GTYRAC	2 cut(s)	657, 1990
HindII	GTYRAC	2 cut(s)	657, 1990
HinfI	GANTC	8 cut(s)	9, 400, 903, 1105, 1140, 1501, 1579, 2254
HpaI	GTTAAC	1 cut(s)	1990
HpaII	CCGG	7 cut(s)	6, 89, 181, 190, 211, 295, 1877
HphI	GGTGA	4 cut(s)	683, 860, 1280, 1430
Hpy166II	GTNNAC	6 cut(s)	112, 352, 657, 1059, 1279, 1990
Hpy188I	TCNGA	5 cut(s)	70, 1080, 1823, 2155, 2248
Hpy8I	GTNNAC	6 cut(s)	112, 352, 657, 1059, 1279, 1990
Hpy99I	CGWCG	2 cut(s)	233, 236
HpyAV	CCTTC	8 cut(s)	91, 294, 1401, 1466, 2037, 2124, 2126, 2195
HpyCH4III	ACNGT	8 cut(s)	160, 896, 1267, 1283, 1710, 1925, 2138, 2228
HpyCH4IV	ACGT	2 cut(s)	1561, 2467
HpyF10VI	GCNNNNNNNGC	8 cut(s)	54, 532, 1117, 1745, 1754, 2085, 2220, 2318
HpySE526I	ACGT	2 cut(s)	1561, 2467
KpnI	GGTACC	1 cut(s)	322
KroI	GCCGGC	1 cut(s)	294
KroNI	GCCGGC	1 cut(s)	296
KspAI	GTTAAC	1 cut(s)	1990
KspI	CCGCGG	1 cut(s)	427
LmnI	GCTCC	8 cut(s)	91, 219, 271, 1147, 1378, 1823, 1891, 1950
LweI	GCATC	9 cut(s)	159, 246, 397, 491, 1474, 1498, 1793, 1855, 1908
MaeI	CTAG	2 cut(s)	2081, 2216
MaeII	ACGT	2 cut(s)	1561, 2467
MaeIII	GTNAC	5 cut(s)	671, 1604, 1649, 1811, 2109
MflI	RGATCY	1 cut(s)	2068
MhlI	GDGCHC	4 cut(s)	354, 649, 973, 2005
MlsI	TGGCCA	3 cut(s)	572, 1299, 1566
MluNI	TGGCCA	3 cut(s)	572, 1299, 1566
MlyI	GAGTC	3 cut(s)	897, 1099, 1573
MmeI	TCCRAC	5 cut(s)	48, 478, 1772, 1921, 2178
Mox20I	TGGCCA	3 cut(s)	572, 1299, 1566
Mph1103I	ATGCAT	5 cut(s)	261, 579, 1680, 1786, 2090
MroNI	GCCGGC	1 cut(s)	294
MroXI	GAANNNNTTC	2 cut(s)	143, 2419
MscI	TGGCCA	3 cut(s)	572, 1299, 1566
MseI	TTAA	8 cut(s)	330, 360, 996, 1004, 1412, 1437, 1989, 2409
MslI	CAYNNNNRTG	5 cut(s)	582, 607, 1293, 1683, 2466
Msp20I	TGGCCA	3 cut(s)	572, 1299, 1566
MspA1I	CMGCKG	6 cut(s)	222, 341, 426, 1120, 1329, 1448
MspCI	CTTAAG	1 cut(s)	359
MspI	CCGG	7 cut(s)	6, 89, 181, 190, 211, 295, 1877
Mva1269I	GAATGC	3 cut(s)	1244, 2090, 2321
MvaI	CCWGG	5 cut(s)	198, 777, 1197, 1305, 1896
MvnI	CGCG	2 cut(s)	426, 2351
MwoI	GCNNNNNNNGC	8 cut(s)	54, 532, 1117, 1745, 1754, 2085, 2220, 2318
NaeI	GCCGGC	1 cut(s)	296
NciI	CCSGG	5 cut(s)	90, 190, 211, 1877, 1878
NcoI	CCATGG	1 cut(s)	1541
NgoMIV	GCCGGC	1 cut(s)	294
NmeAIII	GCCGAG	1 cut(s)	1087
NmuCI	GTSAC	3 cut(s)	671, 1604, 1649
NsiI	ATGCAT	5 cut(s)	261, 579, 1680, 1786, 2090
NspI	RCATGY	2 cut(s)	1031, 1160
NspV	TTCGAA	1 cut(s)	617
OliI	CACNNNNGTG	2 cut(s)	607, 1293
PciI	ACATGT	1 cut(s)	1156
PctI	GAATGC	3 cut(s)	1244, 2090, 2321
PdiI	GCCGGC	1 cut(s)	296
PdmI	GAANNNNTTC	2 cut(s)	143, 2419
PfeI	GAWTC	5 cut(s)	9, 400, 1140, 1501, 2254
PflMI	CCANNNNNTGG	1 cut(s)	308
PfoI	TCCNGGA	1 cut(s)	88
Ple19I	CGATCG	1 cut(s)	2349
PleI	GAGTC	3 cut(s)	897, 1099, 1573
PmaCI	CACGTG	1 cut(s)	1562
PmlI	CACGTG	1 cut(s)	1562
PpsI	GAGTC	3 cut(s)	897, 1099, 1573
Ppu21I	YACGTR	2 cut(s)	1562, 2468
PscI	ACATGT	1 cut(s)	1156
Psp124BI	GAGCTC	1 cut(s)	649
Psp6I	CCWGG	5 cut(s)	196, 775, 1195, 1303, 1894
PspCI	CACGTG	1 cut(s)	1562
PspFI	CCCAGC	2 cut(s)	1358, 1998
PspGI	CCWGG	5 cut(s)	196, 775, 1195, 1303, 1894
PspOMI	GGGCCC	1 cut(s)	2001
PspPI	GGNCC	6 cut(s)	109, 200, 428, 1529, 2001, 2002
PstI	CTGCAG	1 cut(s)	1453
PsuI	RGATCY	1 cut(s)	2068
PvuI	CGATCG	1 cut(s)	2349
PvuII	CAGCTG	5 cut(s)	222, 341, 1120, 1329, 1448
RsaI	GTAC	8 cut(s)	248, 320, 491, 1155, 1164, 1333, 2428, 2481
RsaNI	GTAC	8 cut(s)	247, 319, 490, 1154, 1163, 1332, 2427, 2480
RseI	CAYNNNNRTG	5 cut(s)	582, 607, 1293, 1683, 2466
SacI	GAGCTC	1 cut(s)	649
SacII	CCGCGG	1 cut(s)	427
SaqAI	TTAA	8 cut(s)	330, 360, 996, 1004, 1412, 1437, 1989, 2409
Sau96I	GGNCC	6 cut(s)	109, 200, 428, 1529, 2001, 2002
SchI	GAGTC	3 cut(s)	897, 1099, 1573
SduI	GDGCHC	4 cut(s)	354, 649, 973, 2005
SfaNI	GCATC	9 cut(s)	159, 246, 397, 491, 1474, 1498, 1793, 1855, 1908
SfcI	CTRYAG	3 cut(s)	1233, 1266, 1449
Sfr303I	CCGCGG	1 cut(s)	427
SfuI	TTCGAA	1 cut(s)	617
SgrBI	CCGCGG	1 cut(s)	427
SinI	GGWCC	2 cut(s)	109, 1529
SmaI	CCCGGG	1 cut(s)	1878
SmiMI	CAYNNNNRTG	5 cut(s)	582, 607, 1293, 1683, 2466
SmlI	CTYRAG	2 cut(s)	359, 1522
SmoI	CTYRAG	2 cut(s)	359, 1522
SsiI	CCGC	8 cut(s)	26, 29, 74, 424, 426, 634, 967, 1735
SspMI	CTAG	2 cut(s)	2081, 2216
SstI	GAGCTC	1 cut(s)	649
StyI	CCWWGG	3 cut(s)	440, 1541, 2215
TaaI	ACNGT	8 cut(s)	160, 896, 1267, 1283, 1710, 1925, 2138, 2228
TaiI	ACGT	2 cut(s)	1564, 2470
TatI	WGTACW	3 cut(s)	246, 1153, 1162
TauI	GCSGC	2 cut(s)	29, 32
TfiI	GAWTC	5 cut(s)	9, 400, 1140, 1501, 2254
Tru1I	TTAA	8 cut(s)	330, 360, 996, 1004, 1412, 1437, 1989, 2409
Tru9I	TTAA	8 cut(s)	330, 360, 996, 1004, 1412, 1437, 1989, 2409
TscAI	CASTG	5 cut(s)	359, 656, 703, 1774, 1804
TseFI	GTSAC	3 cut(s)	671, 1604, 1649
Tsp45I	GTSAC	3 cut(s)	671, 1604, 1649
TspDTI	ATGAA	5 cut(s)	1206, 1353, 1448, 2108, 2118
TspGWI	ACGGA	2 cut(s)	1349, 1496
TspMI	CCCGGG	1 cut(s)	1876
TspRI	CASTG	5 cut(s)	359, 656, 703, 1774, 1804
Van91I	CCANNNNNTGG	1 cut(s)	308
Vha464I	CTTAAG	1 cut(s)	359
VneI	GTGCAC	1 cut(s)	350
VpaK11BI	GGWCC	2 cut(s)	109, 1529
XagI	CCTNNNNNAGG	1 cut(s)	1893
XapI	RAATTY	4 cut(s)	982, 1547, 1931, 2419
XceI	RCATGY	2 cut(s)	1031, 1160
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1053, 1539
XmaI	CCCGGG	1 cut(s)	1876
XmaJI	CCTAGG	1 cut(s)	2215
XmnI	GAANNNNTTC	2 cut(s)	143, 2419
XspI	CTAG	2 cut(s)	2081, 2216
Zsp2I	ATGCAT	5 cut(s)	261, 579, 1680, 1786, 2090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.