FvH4_6g53880

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
39432689 .. 39434255
1567 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53880.t1

Sequence Viewer

Length: 1338 bp
ATGGTTGTGGAAGCTGGTGAGTCTGCTTCAATGAACAACTCCAATGGGAATGTGTTCCAACTCAGAGTGAAGCAAGGGGAGCCAACTCTGGTTTCCCCTGCAGAAGAGACAGACAAGGGTTTGTACTTCCTCTCCAACCTCGACCAAAACATTGCGGTCATTGTTCGAACTATATATTGCTTCAAGTCAGATGAGAAAGATAATAGCAAGGCAGGGGAAGTGATCAAGGATGCTCTCAAAAAGGTTCTTGTCCACTATTATCCACTTGCCGGGCGCCTCGCAATCAGCTCGGAAGGAAAGCTCATTGTAGATTGTACCGGAGAAGGAGCTGTTTTCGTGGAGGCAGAAGCAGATTGTACAATAGAAGATATTGGAGACATAACAAAGCCTGATCCAGAGACTCTTGGAAAGCTGGTCTATGACATTCCTGGGGCCAAGAACATACTAGAAGTGCCTCCTCTTGTTGCCCAGGTGACAAAATTCAAATGTGGAGGGTTTTCTCTTGGCCTGTGCATGAACCACTGTATGTTTGATGGCATTGGGGCTATGGAGTTTGTGAACTCATGGGGACAAACTGCGAGAGGTTTGCCATTACAAGTTGCTCCATTTTTAGACAGAAGCATACTCAAAGCACGAAACCCACCTAAGATAGATCACCTGCACCAAGAATTCTCCGAGCTTATTGATGGCAATTCTAGCTGTAACTCTTCTGAAGTTGATGAGGACAAGATGCTGTATAGGTCCTTCTGTTTTGACACTGAGAAGCTCGAAAAGCTGAAAGCTAAAGCCAGGGAAGATGGTGCTCTTGACAAGTGCTCTACATTTGAAGCCCTCTCGGCATTTGTGTGGAAAGCTCGGACTAGAGCACTCAGACTCTTGCCTGAACAACAGATCAAACTCTTGTTTGCTGTTGATGGGAGGCCTAAGTTCAACCCACCACTCCCAAAAGGATACTTTGGGAATGGCATTGTGTTAACAAATTCAATCTGTGAAGCAGGTGAGCTGCTGGAAAAGCCACTGTCACATGCGGTCGGGCTTGTTCAAGATGCCATCAAGATGGTCACTGACGGTTACATGAGATCAGCCATAGACTATTTCGAAGCGACGAGAGCTAGACCTTCTCTGGCATCCACTCTTTTGATCACAACTTGGTCTCGACTTTCGTTTTACACCACTGACTTTGGTTGGGGAGAGCCTATACTCTCAGGTCCAGTGGCTTTGCCGGAGAAAGAGGTGATCTTATTCCTGTCCAATGGGACAGAGAAGAAAAACATAAACGTGCTTTTGGGTCTTCCAGCTTCTGCCATGGATGTCTTTCAAGAACTGATGAATATCTAG

Protein Analysis

446

Amino Acids

48.88

Weight (kDa)

5.14

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 26 - 443 5.5e-95 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 666, 986
Acc36I ACCTGC 2 cut(s) 666, 986
AccB1I GGYRCC 1 cut(s) 273
AciI CCGC 2 cut(s) 155, 1028
AclWI GGATC 1 cut(s) 386
AcsI RAATTY 3 cut(s) 479, 668, 979
AcuI CTGAAG 1 cut(s) 732
AcyI GRCGYC 1 cut(s) 274
AfaI GTAC 3 cut(s) 125, 316, 358
AfiI CCNNNNNNNGG 1 cut(s) 269
AgsI TTSAA 8 cut(s) 30, 184, 484, 827, 931, 984, 1043, 1319
AjnI CCWGG 3 cut(s) 427, 468, 788
AjuI GAANNNNNNNTTGG 2 cut(s) 76, 108
Alw21I GWGCWC 3 cut(s) 805, 818, 868
Alw26I GTCTC 4 cut(s) 101, 369, 392, 1158
AlwI GGATC 1 cut(s) 386
AlwNI CAGNNNCTG 1 cut(s) 1301
AoxI GGCC 3 cut(s) 432, 505, 920
ApeKI GCWGC 1 cut(s) 1003
ApoI RAATTY 3 cut(s) 479, 668, 979
Asp700I GAANNNNTTC 1 cut(s) 53
AspLEI GCGC 1 cut(s) 276
AspS9I GGNCC 3 cut(s) 432, 741, 1208
AsuC2I CCSGG 1 cut(s) 271
AsuHPI GGTGA 5 cut(s) 29, 484, 647, 1010, 1246
AsuII TTCGAA 2 cut(s) 166, 1098
AvaII GGWCC 2 cut(s) 741, 1208
BanI GGYRCC 1 cut(s) 273
BarI GAAGNNNNNNTAC 2 cut(s) 728, 760
BbsI GAAGAC 1 cut(s) 1283
Bbv12I GWGCWC 3 cut(s) 805, 818, 868
BbvI GCAGC 1 cut(s) 990
BccI CCATC 6 cut(s) 527, 680, 791, 908, 1051, 1058
BcgI CGANNNNNNTGC 4 cut(s) 270, 304, 568, 602
BciT130I CCWGG 3 cut(s) 429, 470, 790
BciVI GTATCC 1 cut(s) 944
BclI TGATCA 2 cut(s) 222, 1140
BcnI CCSGG 1 cut(s) 271
BcoDI GTCTC 4 cut(s) 101, 369, 392, 1158
BfaI CTAG 5 cut(s) 446, 696, 861, 1113, 1336
BfmI CTRYAG 1 cut(s) 99
BfoI RGCGCY 1 cut(s) 277
BfuAI ACCTGC 2 cut(s) 666, 986
BfuI GTATCC 1 cut(s) 944
BglI GCCNNNNNGGC 1 cut(s) 836
BisI GCNGC 1 cut(s) 1004
BlsI GCNGC 1 cut(s) 1005
Bme1390I CCNGG 4 cut(s) 271, 429, 470, 790
Bme18I GGWCC 2 cut(s) 741, 1208
BmgT120I GGNCC 3 cut(s) 432, 741, 1208
BmiI GGNNCC 3 cut(s) 81, 275, 433
BmrFI CCNGG 4 cut(s) 271, 429, 470, 790
BmsI GCATC 4 cut(s) 220, 720, 1036, 1136
BpiI GAAGAC 1 cut(s) 1283
Bpu14I TTCGAA 2 cut(s) 166, 1098
BpuMI CCSGG 1 cut(s) 271
BsaBI GATNNNNATC 1 cut(s) 1331
BsaHI GRCGYC 1 cut(s) 274
BsaI GGTCTC 1 cut(s) 1158
BsaJI CCNNGG 4 cut(s) 428, 468, 789, 1305
BsaWI WCCGGW 1 cut(s) 317
BsaXI ACNNNNNCTCC 2 cut(s) 116, 146
Bsc4I CCNNNNNNNGG 1 cut(s) 269
Bse1I ACTGG 1 cut(s) 1211
Bse3DI GCAATG 1 cut(s) 150
Bse8I GATNNNNATC 1 cut(s) 1331
BseBI CCWGG 3 cut(s) 429, 470, 790
BseDI CCNNGG 4 cut(s) 428, 468, 789, 1305
BseGI GGATG 3 cut(s) 235, 1127, 1315
BseJI GATNNNNATC 1 cut(s) 1331
BseLI CCNNNNNNNGG 1 cut(s) 269
BseMI GCAATG 1 cut(s) 150
BseMII CTCAG 4 cut(s) 76, 750, 883, 1218
BseNI ACTGG 1 cut(s) 1211
BseRI GAGGAG 1 cut(s) 447
BseXI GCAGC 1 cut(s) 990
BsgI GTGCAG 1 cut(s) 644
Bsh1285I CGRYCG 1 cut(s) 1032
BshFI GGCC 3 cut(s) 434, 507, 922
BshNI GGYRCC 1 cut(s) 273
BsiEI CGRYCG 1 cut(s) 1032
BsiHKAI GWGCWC 3 cut(s) 805, 818, 868
BsiSI CCGG 3 cut(s) 270, 318, 1223
BslFI GGGAC 2 cut(s) 582, 1270
BslI CCNNNNNNNGG 1 cut(s) 269
BsmAI GTCTC 4 cut(s) 101, 369, 392, 1158
BsmFI GGGAC 2 cut(s) 582, 1270
BsnI GGCC 3 cut(s) 434, 507, 922
Bso31I GGTCTC 1 cut(s) 1158
Bsp119I TTCGAA 2 cut(s) 166, 1098
Bsp1286I GDGCHC 3 cut(s) 805, 818, 868
Bsp1407I TGTACA 1 cut(s) 356
Bsp143I GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
Bsp19I CCATGG 1 cut(s) 1305
BspACI CCGC 2 cut(s) 155, 1028
BspANI GGCC 3 cut(s) 434, 507, 922
BspCNI CTCAG 4 cut(s) 75, 751, 882, 1217
BspLI GGNNCC 3 cut(s) 81, 275, 433
BspMAI CTGCAG 1 cut(s) 103
BspMI ACCTGC 2 cut(s) 666, 986
BspPI GGATC 1 cut(s) 386
BspT104I TTCGAA 2 cut(s) 166, 1098
BspT107I GGYRCC 1 cut(s) 273
BspTNI GGTCTC 1 cut(s) 1158
BsrDI GCAATG 1 cut(s) 150
BsrGI TGTACA 1 cut(s) 356
BsrI ACTGG 1 cut(s) 1211
BssECI CCNNGG 4 cut(s) 428, 468, 789, 1305
BssMI GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
BssNI GRCGYC 1 cut(s) 274
BssT1I CCWWGG 1 cut(s) 1305
Bst2UI CCWGG 3 cut(s) 429, 470, 790
Bst4CI ACNGT 3 cut(s) 524, 1020, 1070
Bst6I CTCTTC 2 cut(s) 99, 712
BstACI GRCGYC 1 cut(s) 274
BstAUI TGTACA 1 cut(s) 356
BstBI TTCGAA 2 cut(s) 166, 1098
BstDEI CTNAG 6 cut(s) 62, 645, 759, 869, 924, 1204
BstDSI CCRYGG 1 cut(s) 1305
BstF5I GGATG 3 cut(s) 235, 1127, 1315
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 1 cut(s) 276
BstKTI GATC 7 cut(s) 225, 394, 655, 894, 1082, 1143, 1239
BstMAI GTCTC 4 cut(s) 101, 369, 392, 1158
BstMBI GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
BstMCI CGRYCG 1 cut(s) 1032
BstMWI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
BstNI CCWGG 3 cut(s) 429, 470, 790
BstNSI RCATGY 1 cut(s) 1028
BstSCI CCNGG 4 cut(s) 269, 427, 468, 788
BstSFI CTRYAG 1 cut(s) 99
BstV1I GCAGC 1 cut(s) 990
BstV2I GAAGAC 1 cut(s) 1283
BstXI CCANNNNNNTGG 1 cut(s) 1057
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 3 cut(s) 434, 507, 922
BtgI CCRYGG 1 cut(s) 1305
BtsCI GGATG 3 cut(s) 235, 1127, 1315
BtsIMutI CAGTG 6 cut(s) 520, 756, 1016, 1062, 1173, 1218
BveI ACCTGC 2 cut(s) 666, 986
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 1 cut(s) 276
Cfr13I GGNCC 3 cut(s) 432, 741, 1208
Csp6I GTAC 3 cut(s) 124, 315, 357
CspCI CAANNNNNGTGG 2 cut(s) 1162, 1197
CviAII CATG 5 cut(s) 514, 564, 1025, 1075, 1306
CviQI GTAC 3 cut(s) 124, 315, 357
DdeI CTNAG 6 cut(s) 62, 645, 759, 869, 924, 1204
DinI GGCGCC 1 cut(s) 275
DpnI GATC 7 cut(s) 224, 393, 654, 893, 1081, 1142, 1238
DpnII GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
Eam1104I CTCTTC 2 cut(s) 99, 712
EarI CTCTTC 2 cut(s) 99, 712
Eco130I CCWWGG 1 cut(s) 1305
Eco147I AGGCCT 1 cut(s) 922
Eco31I GGTCTC 1 cut(s) 1158
Eco47I GGWCC 2 cut(s) 741, 1208
Eco57I CTGAAG 1 cut(s) 732
EcoO109I RGGNCCY 1 cut(s) 741
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 3 cut(s) 427, 468, 788
EcoT14I CCWWGG 1 cut(s) 1305
EgeI GGCGCC 1 cut(s) 275
EheI GGCGCC 1 cut(s) 275
ErhI CCWWGG 1 cut(s) 1305
FaeI CATG 5 cut(s) 517, 567, 1028, 1078, 1309
FaqI GGGAC 2 cut(s) 582, 1270
FatI CATG 5 cut(s) 513, 563, 1024, 1074, 1305
FbaI TGATCA 2 cut(s) 222, 1140
Fnu4HI GCNGC 1 cut(s) 1004
FokI GGATG 3 cut(s) 242, 1114, 1322
Fsp4HI GCNGC 1 cut(s) 1004
FspBI CTAG 5 cut(s) 446, 696, 861, 1113, 1336
GlaI GCGC 1 cut(s) 275
GluI GCNGC 1 cut(s) 1004
HaeII RGCGCY 1 cut(s) 277
HaeIII GGCC 3 cut(s) 434, 507, 922
HapII CCGG 3 cut(s) 270, 318, 1223
HhaI GCGC 1 cut(s) 276
Hin1I GRCGYC 1 cut(s) 274
Hin1II CATG 5 cut(s) 517, 567, 1028, 1078, 1309
Hin6I GCGC 1 cut(s) 274
HinP1I GCGC 1 cut(s) 274
HincII GTYRAC 1 cut(s) 975
HindII GTYRAC 1 cut(s) 975
HinfI GANTC 3 cut(s) 20, 400, 873
HpaI GTTAAC 1 cut(s) 975
HpaII CCGG 3 cut(s) 270, 318, 1223
HphI GGTGA 5 cut(s) 29, 484, 647, 1010, 1246
Hpy166II GTNNAC 3 cut(s) 253, 559, 975
Hpy188I TCNGA 7 cut(s) 65, 190, 292, 676, 712, 858, 872
Hpy188III TCNNGA 6 cut(s) 395, 806, 1043, 1054, 1155, 1319
Hpy8I GTNNAC 3 cut(s) 253, 559, 975
Hpy99I CGWCG 1 cut(s) 1108
HpyAV CCTTC 4 cut(s) 287, 317, 754, 1128
HpyCH4III ACNGT 3 cut(s) 524, 1020, 1070
HpyCH4IV ACGT 1 cut(s) 1278
HpyCH4V TGCA 3 cut(s) 101, 513, 661
HpyF10VI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
HpyF3I CTNAG 6 cut(s) 62, 645, 759, 869, 924, 1204
HpySE526I ACGT 1 cut(s) 1278
Hsp92I GRCGYC 1 cut(s) 274
Hsp92II CATG 5 cut(s) 517, 567, 1028, 1078, 1309
HspAI GCGC 1 cut(s) 274
KasI GGCGCC 1 cut(s) 273
Ksp22I TGATCA 2 cut(s) 222, 1140
KspAI GTTAAC 1 cut(s) 975
Kzo9I GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
LmnI GCTCC 3 cut(s) 79, 326, 607
Lsp1109I GCAGC 1 cut(s) 990
LweI GCATC 4 cut(s) 220, 720, 1036, 1136
MaeI CTAG 5 cut(s) 446, 696, 861, 1113, 1336
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 5 cut(s) 472, 701, 1020, 1060, 1070
MalI GATC 7 cut(s) 224, 393, 654, 893, 1081, 1142, 1238
MboI GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
MboII GAAGA 6 cut(s) 116, 377, 699, 806, 1276, 1283
MhlI GDGCHC 3 cut(s) 805, 818, 868
MluCI AATT 4 cut(s) 479, 668, 691, 979
Mly113I GGCGCC 1 cut(s) 274
MlyI GAGTC 3 cut(s) 29, 394, 867
MmeI TCCRAC 2 cut(s) 82, 159
MroXI GAANNNNTTC 1 cut(s) 53
MseI TTAA 1 cut(s) 974
MslI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
MspI CCGG 3 cut(s) 270, 318, 1223
MspR9I CCNGG 4 cut(s) 271, 429, 470, 790
MvaI CCWGG 3 cut(s) 429, 470, 790
MwoI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
NarI GGCGCC 1 cut(s) 274
NciI CCSGG 1 cut(s) 271
NcoI CCATGG 1 cut(s) 1305
NdeII GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
NlaIII CATG 5 cut(s) 517, 567, 1028, 1078, 1309
NlaIV GGNNCC 3 cut(s) 81, 275, 433
NmeAIII GCCGAG 1 cut(s) 815
NmuCI GTSAC 3 cut(s) 472, 1020, 1060
NspI RCATGY 1 cut(s) 1028
NspV TTCGAA 2 cut(s) 166, 1098
PaqCI CACCTGC 2 cut(s) 666, 986
PceI AGGCCT 1 cut(s) 922
PdmI GAANNNNTTC 1 cut(s) 53
PkrI GCNGC 1 cut(s) 1005
PleI GAGTC 3 cut(s) 28, 394, 867
PluTI GGCGCC 1 cut(s) 277
PpsI GAGTC 3 cut(s) 28, 394, 867
PpuMI RGGWCCY 1 cut(s) 741
Psp5II RGGWCCY 1 cut(s) 741
Psp6I CCWGG 3 cut(s) 427, 468, 788
PspGI CCWGG 3 cut(s) 427, 468, 788
PspN4I GGNNCC 3 cut(s) 81, 275, 433
PspPI GGNCC 3 cut(s) 432, 741, 1208
PspPPI RGGWCCY 1 cut(s) 741
PstI CTGCAG 1 cut(s) 103
PstNI CAGNNNCTG 1 cut(s) 1301
RsaI GTAC 3 cut(s) 125, 316, 358
RsaNI GTAC 3 cut(s) 124, 315, 357
RseI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
SaqAI TTAA 1 cut(s) 974
SatI GCNGC 1 cut(s) 1004
Sau3AI GATC 7 cut(s) 222, 391, 652, 891, 1079, 1140, 1236
Sau96I GGNCC 3 cut(s) 432, 741, 1208
SchI GAGTC 3 cut(s) 29, 394, 867
ScrFI CCNGG 4 cut(s) 271, 429, 470, 790
SduI GDGCHC 3 cut(s) 805, 818, 868
SfaNI GCATC 4 cut(s) 220, 720, 1036, 1136
SfcI CTRYAG 1 cut(s) 99
SfoI GGCGCC 1 cut(s) 275
SfuI TTCGAA 2 cut(s) 166, 1098
SinI GGWCC 2 cut(s) 741, 1208
SmiMI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
Sse9I AATT 4 cut(s) 479, 668, 691, 979
SseBI AGGCCT 1 cut(s) 922
SsiI CCGC 2 cut(s) 155, 1028
SspDI GGCGCC 1 cut(s) 273
SspMI CTAG 5 cut(s) 446, 696, 861, 1113, 1336
StuI AGGCCT 1 cut(s) 922
StyD4I CCNGG 4 cut(s) 269, 427, 468, 788
StyI CCWWGG 1 cut(s) 1305
TaaI ACNGT 3 cut(s) 524, 1020, 1070
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 5 cut(s) 141, 166, 768, 1098, 1156
TasI AATT 4 cut(s) 479, 668, 691, 979
TatI WGTACW 2 cut(s) 123, 356
Tru1I TTAA 1 cut(s) 974
Tru9I TTAA 1 cut(s) 974
TscAI CASTG 6 cut(s) 527, 763, 1023, 1069, 1180, 1218
TseFI GTSAC 3 cut(s) 472, 1020, 1060
TseI GCWGC 1 cut(s) 1003
Tsp45I GTSAC 3 cut(s) 472, 1020, 1060
TspDTI ATGAA 2 cut(s) 47, 530
TspRI CASTG 6 cut(s) 527, 763, 1023, 1069, 1180, 1218
VpaK11BI GGWCC 2 cut(s) 741, 1208
XapI RAATTY 3 cut(s) 479, 668, 979
XceI RCATGY 1 cut(s) 1028
XmnI GAANNNNTTC 1 cut(s) 53
XspI CTAG 5 cut(s) 446, 696, 861, 1113, 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.