Rmu_sc0033063.1_g000002

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0033063.1
Physical Location & Seq
Reverse (-)
10811 .. 12375
1565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0033063.1_g000002.1.cds

Sequence Viewer

Length: 1338 bp
atggttgtggaagctggagattctgctgcaatgaacaactccagtgggaatgtgttccaactcaaagtgaagcaaggagagccaactctggtttcccctgcagaagaaacagacaagggtttgtacttcctctctaacctcgaccaaaacattgcggtcactgttcgaactatttattgtttcaagtcagatgagaaagataatagcaaggcaggggaagtgatcaagaatgctctcaaaaaggttcttgtccactattacccccttgctgggcgcctgtcaatcagctcggaaggaaagctcattgtagattgcaccggagaaggagctgttttcgttgaggcagaagcagattgtacaatagaagatattggagacataacaaaacctgatccggagactcttggaaagctggtctatgacattcctggtgccaagaacatactagaagtgcctcctcttgtggcccaggtgacaaaattcaaatgcggagggttttctcttggcctgtgcatgaaccactgtatgtttgatggcattggggctatggagtttgtgaactcatggggagagactgcgagaggtttgccattaacagttgttccgttcatagacagaagcatactcaaagcacgaaacccacctaagatagagcacctgcaccaagagttctctgagattattgatggcaattctagccttaactcttctgaagttgatgaagacaagatgctgtataggtccttctgttttgacactgagaagctcgaaaagctgaaaactaaagccagggaagacggcgctcttgacaagtgctctacatttgaagccctctcagcatttgtgtggaaagctcggactagagccctgagactcttgcctgaacaacaaatcaagctcttgtttgctgttgatgggaggcataagttcaacccaccactcccaaacgggtactttgggaatggcattgtgttgacacatgcaatctgtgaagcaggtgatctgctggaaaagccactgtcacatgcggttgggcttgttcaagatgccatcaagatggtcactgacagttacatgagatcagccattgactatttcgaagcaacgagagctaggccttctttgtcctctactcttttgatcacaacttggtctcggctttcattttacaccactgactttggttggggagagcctatactctcaggtccagtggctttgccggagaaggaggtgatcttattcctgtctcatgggacagagaagaaaagcattaacgtgcttttgggtcttccagcttctgccatgaaggtctttcaagaactgatgaatatgtag

Protein Analysis

445

Amino Acids

48.94

Weight (kDa)

5.38

Isoelectric Point (pI)

35.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 666, 986
Acc36I ACCTGC 2 cut(s) 666, 986
AccB1I GGYRCC 2 cut(s) 273, 431
AccIII TCCGGA 1 cut(s) 394
AciI CCGC 3 cut(s) 155, 489, 1028
AclWI GGATC 1 cut(s) 386
AcsI RAATTY 1 cut(s) 479
AcuI CTGAAG 1 cut(s) 732
AcyI GRCGYC 1 cut(s) 274
AfaI GTAC 3 cut(s) 125, 358, 953
AfiI CCNNNNNNNGG 2 cut(s) 269, 270
AgsI TTSAA 6 cut(s) 184, 484, 827, 931, 1043, 1319
AjnI CCWGG 3 cut(s) 427, 468, 788
AjuI GAANNNNNNNTTGG 2 cut(s) 76, 108
Alw21I GWGCWC 2 cut(s) 657, 818
Alw26I GTCTC 6 cut(s) 369, 392, 566, 865, 1158, 1254
AlwI GGATC 1 cut(s) 386
AlwNI CAGNNNCTG 1 cut(s) 1301
Aor13HI TCCGGA 1 cut(s) 394
AoxI GGCC 3 cut(s) 465, 505, 1115
ApeKI GCWGC 1 cut(s) 26
ApoI RAATTY 1 cut(s) 479
Asp700I GAANNNNTTC 1 cut(s) 53
AspLEI GCGC 2 cut(s) 276, 803
AspS9I GGNCC 3 cut(s) 466, 741, 1208
AsuHPI GGTGA 3 cut(s) 484, 1010, 1246
AsuII TTCGAA 2 cut(s) 166, 1098
AvaII GGWCC 2 cut(s) 741, 1208
BanI GGYRCC 2 cut(s) 273, 431
BanII GRGCYC 1 cut(s) 868
BarI GAAGNNNNNNTAC 2 cut(s) 728, 760
BbsI GAAGAC 3 cut(s) 729, 801, 1283
Bbv12I GWGCWC 2 cut(s) 657, 818
BbvI GCAGC 1 cut(s) 13
BccI CCATC 5 cut(s) 527, 680, 908, 1051, 1058
BceAI ACGGC 1 cut(s) 814
BcgI CGANNNNNNTGC 2 cut(s) 568, 602
BciT130I CCWGG 3 cut(s) 429, 470, 790
BclI TGATCA 2 cut(s) 222, 1140
BcoDI GTCTC 6 cut(s) 369, 392, 566, 865, 1158, 1254
BfaI CTAG 4 cut(s) 446, 696, 861, 1113
BfmI CTRYAG 1 cut(s) 99
BfoI RGCGCY 2 cut(s) 277, 804
BfuAI ACCTGC 2 cut(s) 666, 986
BisI GCNGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 28
Bme1390I CCNGG 3 cut(s) 429, 470, 790
Bme18I GGWCC 2 cut(s) 741, 1208
BmgT120I GGNCC 3 cut(s) 466, 741, 1208
BmiI GGNNCC 2 cut(s) 275, 433
BmrFI CCNGG 3 cut(s) 429, 470, 790
BmsI GCATC 2 cut(s) 720, 1036
BpiI GAAGAC 3 cut(s) 729, 801, 1283
BpmI CTGGAG 2 cut(s) 25, 36
Bpu14I TTCGAA 2 cut(s) 166, 1098
BsaHI GRCGYC 1 cut(s) 274
BsaI GGTCTC 1 cut(s) 1158
BsaJI CCNNGG 2 cut(s) 468, 789
BsaWI WCCGGW 2 cut(s) 317, 394
Bsc4I CCNNNNNNNGG 2 cut(s) 269, 270
Bse1I ACTGG 2 cut(s) 42, 1211
Bse3DI GCAATG 2 cut(s) 36, 150
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 3 cut(s) 429, 470, 790
BseDI CCNNGG 2 cut(s) 468, 789
BseLI CCNNNNNNNGG 2 cut(s) 269, 270
BseMI GCAATG 2 cut(s) 36, 150
BseMII CTCAG 5 cut(s) 666, 750, 849, 860, 1218
BseNI ACTGG 2 cut(s) 42, 1211
BseRI GAGGAG 1 cut(s) 447
BseXI GCAGC 1 cut(s) 13
BseYI CCCAGC 1 cut(s) 269
BsgI GTGCAG 1 cut(s) 644
BshFI GGCC 3 cut(s) 467, 507, 1117
BshNI GGYRCC 2 cut(s) 273, 431
BsiHKAI GWGCWC 2 cut(s) 657, 818
BsiSI CCGG 3 cut(s) 318, 395, 1223
BslFI GGGAC 1 cut(s) 1270
BslI CCNNNNNNNGG 2 cut(s) 269, 270
BsmAI GTCTC 6 cut(s) 369, 392, 566, 865, 1158, 1254
BsmFI GGGAC 1 cut(s) 1270
BsmI GAATGC 1 cut(s) 235
BsnI GGCC 3 cut(s) 467, 507, 1117
Bso31I GGTCTC 1 cut(s) 1158
Bsp119I TTCGAA 2 cut(s) 166, 1098
Bsp1286I GDGCHC 3 cut(s) 657, 818, 868
Bsp13I TCCGGA 1 cut(s) 394
Bsp1407I TGTACA 1 cut(s) 356
Bsp143I GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
BspACI CCGC 3 cut(s) 155, 489, 1028
BspANI GGCC 3 cut(s) 467, 507, 1117
BspCNI CTCAG 5 cut(s) 667, 751, 848, 861, 1217
BspEI TCCGGA 1 cut(s) 394
BspLI GGNNCC 2 cut(s) 275, 433
BspMAI CTGCAG 1 cut(s) 103
BspMI ACCTGC 2 cut(s) 666, 986
BspPI GGATC 1 cut(s) 386
BspT104I TTCGAA 2 cut(s) 166, 1098
BspT107I GGYRCC 2 cut(s) 273, 431
BspTNI GGTCTC 1 cut(s) 1158
BsrDI GCAATG 2 cut(s) 36, 150
BsrGI TGTACA 1 cut(s) 356
BsrI ACTGG 2 cut(s) 42, 1211
BssECI CCNNGG 2 cut(s) 468, 789
BssMI GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
BssNI GRCGYC 1 cut(s) 274
Bst2UI CCWGG 3 cut(s) 429, 470, 790
Bst4CI ACNGT 5 cut(s) 163, 524, 598, 1020, 1070
Bst6I CTCTTC 1 cut(s) 712
BstACI GRCGYC 1 cut(s) 274
BstAUI TGTACA 1 cut(s) 356
BstBI TTCGAA 2 cut(s) 166, 1098
BstDEI CTNAG 6 cut(s) 645, 675, 759, 835, 869, 1204
BstH2I RGCGCY 2 cut(s) 277, 804
BstHHI GCGC 2 cut(s) 276, 803
BstKTI GATC 6 cut(s) 225, 394, 1003, 1082, 1143, 1239
BstMAI GTCTC 6 cut(s) 369, 392, 566, 865, 1158, 1254
BstMBI GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
BstMWI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
BstNI CCWGG 3 cut(s) 429, 470, 790
BstNSI RCATGY 2 cut(s) 983, 1028
BstSCI CCNGG 3 cut(s) 427, 468, 788
BstSFI CTRYAG 1 cut(s) 99
BstV1I GCAGC 1 cut(s) 13
BstV2I GAAGAC 3 cut(s) 729, 801, 1283
BstXI CCANNNNNNTGG 1 cut(s) 1057
BsuRI GGCC 3 cut(s) 467, 507, 1117
BtsIMutI CAGTG 8 cut(s) 49, 159, 520, 756, 1016, 1062, 1173, 1218
BveI ACCTGC 2 cut(s) 666, 986
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 2 cut(s) 276, 803
Cfr13I GGNCC 3 cut(s) 466, 741, 1208
Csp6I GTAC 3 cut(s) 124, 357, 952
CspCI CAANNNNNGTGG 4 cut(s) 25, 60, 1162, 1197
CviAII CATG 7 cut(s) 514, 564, 980, 1025, 1075, 1253, 1306
CviQI GTAC 3 cut(s) 124, 357, 952
DdeI CTNAG 6 cut(s) 645, 675, 759, 835, 869, 1204
DinI GGCGCC 1 cut(s) 275
DpnI GATC 6 cut(s) 224, 393, 1002, 1081, 1142, 1238
DpnII GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
Eam1104I CTCTTC 1 cut(s) 712
EarI CTCTTC 1 cut(s) 712
Eco147I AGGCCT 1 cut(s) 1117
Eco24I GRGCYC 1 cut(s) 868
Eco31I GGTCTC 1 cut(s) 1158
Eco47I GGWCC 2 cut(s) 741, 1208
Eco57I CTGAAG 1 cut(s) 732
EcoO109I RGGNCCY 1 cut(s) 741
EcoRII CCWGG 3 cut(s) 427, 468, 788
EcoT38I GRGCYC 1 cut(s) 868
EgeI GGCGCC 1 cut(s) 275
EheI GGCGCC 1 cut(s) 275
FaeI CATG 7 cut(s) 517, 567, 983, 1028, 1078, 1256, 1309
FaqI GGGAC 1 cut(s) 1270
FatI CATG 7 cut(s) 513, 563, 979, 1024, 1074, 1252, 1305
FbaI TGATCA 2 cut(s) 222, 1140
Fnu4HI GCNGC 1 cut(s) 27
FriOI GRGCYC 1 cut(s) 868
Fsp4HI GCNGC 1 cut(s) 27
FspBI CTAG 4 cut(s) 446, 696, 861, 1113
GlaI GCGC 2 cut(s) 275, 802
GluI GCNGC 1 cut(s) 27
GsaI CCCAGC 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 25, 36
HaeII RGCGCY 2 cut(s) 277, 804
HaeIII GGCC 3 cut(s) 467, 507, 1117
HapII CCGG 3 cut(s) 318, 395, 1223
HhaI GCGC 2 cut(s) 276, 803
Hin1I GRCGYC 1 cut(s) 274
Hin1II CATG 7 cut(s) 517, 567, 983, 1028, 1078, 1256, 1309
Hin6I GCGC 2 cut(s) 274, 801
HinP1I GCGC 2 cut(s) 274, 801
HincII GTYRAC 1 cut(s) 975
HindII GTYRAC 1 cut(s) 975
HinfI GANTC 3 cut(s) 20, 400, 873
HpaII CCGG 3 cut(s) 318, 395, 1223
HphI GGTGA 3 cut(s) 484, 1010, 1246
Hpy166II GTNNAC 3 cut(s) 253, 559, 975
Hpy188I TCNGA 5 cut(s) 190, 292, 676, 712, 858
Hpy188III TCNNGA 6 cut(s) 226, 395, 806, 1043, 1054, 1319
Hpy8I GTNNAC 3 cut(s) 253, 559, 975
HpyAV CCTTC 6 cut(s) 287, 317, 754, 1128, 1222, 1303
HpyCH4III ACNGT 5 cut(s) 163, 524, 598, 1020, 1070
HpyCH4IV ACGT 1 cut(s) 1278
HpyCH4V TGCA 6 cut(s) 29, 101, 315, 513, 661, 983
HpyF10VI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
HpyF3I CTNAG 6 cut(s) 645, 675, 759, 835, 869, 1204
HpySE526I ACGT 1 cut(s) 1278
Hsp92I GRCGYC 1 cut(s) 274
Hsp92II CATG 7 cut(s) 517, 567, 983, 1028, 1078, 1256, 1309
HspAI GCGC 2 cut(s) 274, 801
KasI GGCGCC 1 cut(s) 273
Kpn2I TCCGGA 1 cut(s) 394
Ksp22I TGATCA 2 cut(s) 222, 1140
Kzo9I GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
LmnI GCTCC 1 cut(s) 326
Lsp1109I GCAGC 1 cut(s) 13
LweI GCATC 2 cut(s) 720, 1036
MaeI CTAG 4 cut(s) 446, 696, 861, 1113
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 5 cut(s) 157, 472, 1020, 1060, 1070
MalI GATC 6 cut(s) 224, 393, 1002, 1081, 1142, 1238
MboI GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
MboII GAAGA 7 cut(s) 116, 377, 699, 734, 806, 1276, 1283
MhlI GDGCHC 3 cut(s) 657, 818, 868
MluCI AATT 2 cut(s) 479, 691
Mly113I GGCGCC 1 cut(s) 274
MlyI GAGTC 2 cut(s) 394, 867
MmeI TCCRAC 1 cut(s) 82
MroI TCCGGA 1 cut(s) 394
MroXI GAANNNNTTC 1 cut(s) 53
MseI TTAA 3 cut(s) 593, 702, 1275
MslI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
MspI CCGG 3 cut(s) 318, 395, 1223
MspR9I CCNGG 3 cut(s) 429, 470, 790
Mva1269I GAATGC 1 cut(s) 235
MvaI CCWGG 3 cut(s) 429, 470, 790
MwoI GCNNNNNNNGC 6 cut(s) 79, 696, 772, 836, 1012, 1109
NarI GGCGCC 1 cut(s) 274
NdeII GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
NlaIII CATG 7 cut(s) 517, 567, 983, 1028, 1078, 1256, 1309
NlaIV GGNNCC 2 cut(s) 275, 433
NmeAIII GCCGAG 1 cut(s) 1135
NmuCI GTSAC 4 cut(s) 157, 472, 1020, 1060
NspI RCATGY 2 cut(s) 983, 1028
NspV TTCGAA 2 cut(s) 166, 1098
PaqCI CACCTGC 2 cut(s) 666, 986
PceI AGGCCT 1 cut(s) 1117
PctI GAATGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 53
PfeI GAWTC 1 cut(s) 20
PkrI GCNGC 1 cut(s) 28
PleI GAGTC 2 cut(s) 394, 867
PluTI GGCGCC 1 cut(s) 277
PpsI GAGTC 2 cut(s) 394, 867
PpuMI RGGWCCY 1 cut(s) 741
Psp5II RGGWCCY 1 cut(s) 741
Psp6I CCWGG 3 cut(s) 427, 468, 788
PspFI CCCAGC 1 cut(s) 269
PspGI CCWGG 3 cut(s) 427, 468, 788
PspN4I GGNNCC 2 cut(s) 275, 433
PspPI GGNCC 3 cut(s) 466, 741, 1208
PspPPI RGGWCCY 1 cut(s) 741
PstI CTGCAG 1 cut(s) 103
PstNI CAGNNNCTG 1 cut(s) 1301
RsaI GTAC 3 cut(s) 125, 358, 953
RsaNI GTAC 3 cut(s) 124, 357, 952
RseI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
SaqAI TTAA 3 cut(s) 593, 702, 1275
SatI GCNGC 1 cut(s) 27
Sau3AI GATC 6 cut(s) 222, 391, 1000, 1079, 1140, 1236
Sau96I GGNCC 3 cut(s) 466, 741, 1208
SchI GAGTC 2 cut(s) 394, 867
ScrFI CCNGG 3 cut(s) 429, 470, 790
SduI GDGCHC 3 cut(s) 657, 818, 868
SfaNI GCATC 2 cut(s) 720, 1036
SfcI CTRYAG 1 cut(s) 99
SfoI GGCGCC 1 cut(s) 275
SfuI TTCGAA 2 cut(s) 166, 1098
SinI GGWCC 2 cut(s) 741, 1208
SmiMI CAYNNNNRTG 3 cut(s) 844, 1055, 1277
Sse9I AATT 2 cut(s) 479, 691
SseBI AGGCCT 1 cut(s) 1117
SsiI CCGC 3 cut(s) 155, 489, 1028
SspDI GGCGCC 1 cut(s) 273
SspMI CTAG 4 cut(s) 446, 696, 861, 1113
StuI AGGCCT 1 cut(s) 1117
StyD4I CCNGG 3 cut(s) 427, 468, 788
TaaI ACNGT 5 cut(s) 163, 524, 598, 1020, 1070
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 4 cut(s) 141, 166, 768, 1098
TasI AATT 2 cut(s) 479, 691
TatI WGTACW 2 cut(s) 123, 356
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 3 cut(s) 593, 702, 1275
Tru9I TTAA 3 cut(s) 593, 702, 1275
TscAI CASTG 8 cut(s) 49, 166, 527, 763, 1023, 1069, 1180, 1218
TseFI GTSAC 4 cut(s) 157, 472, 1020, 1060
TseI GCWGC 1 cut(s) 26
Tsp45I GTSAC 4 cut(s) 157, 472, 1020, 1060
TspDTI ATGAA 6 cut(s) 47, 530, 598, 735, 1152, 1322
TspGWI ACGGA 1 cut(s) 594
TspRI CASTG 8 cut(s) 49, 166, 527, 763, 1023, 1069, 1180, 1218
VpaK11BI GGWCC 2 cut(s) 741, 1208
XapI RAATTY 1 cut(s) 479
XceI RCATGY 2 cut(s) 983, 1028
XmnI GAANNNNTTC 1 cut(s) 53
XspI CTAG 4 cut(s) 446, 696, 861, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.