pycom111g00590

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Reverse (-)
408892 .. 410280
1389 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g00590.2

Sequence Viewer

Length: 1308 bp
ATGGACAGCAACAACACCAATGGCCACGCGTTCCAGCTGAGAGTGAAGCAAGGAGAGCCAACTCTGGTTCCCCCTGCGGTTGAAACTGAGAAGGGTTTGTACTTCCTCTCGAACCTCGATCAGAACATTGCGGTGACTGTTCGTACTATTTACTGCTTCAAGTCGGATGCAAAGGGAAATGATAAGGCAGGGGAAGTGATCAAGGATGCTTTGAAGAAGGTTCTTGTCCACTACTACCCCCTCGCTGGACGATTAGCAATCAGCGTGGAGGGAAAGCTCATTGTGGATTGCACCGGGGAAGGAGCTGTTTTCGTTGAGGCTGAAGCAGATTGCGTGATAGAAGAGATTGGAGACATAACAAAGCCGGACCCCGAGACTCTTGGGAAGCTGGTTTATGATGTTCCTGGTGCAAAGACCATACTGGAGATTCCTCCACTGGTAGCTCAGGTGACTAAATTCAAATGTGGAGGATTTGCTCTTGGCCTGTGCATGAATCATTGTATGTTTGATGGCATTGGCGCTATGGAATTCGTGAACTCGTGGGCTAAAATTGCCAGAGGTTTACAATTGACAGATCTTCCGTTTTTAGACAGAAGCATACTCAAAGCTCGAAACCCACCTAGGATAGAGTACCTGCATCAAGAATTCTCAGAGATTACTGCCACTTCTAGCACCAACAAGGACCTTTGTGAAGAAAAAATGCTGTACAGATCCTTCTGTTTCGACAGTGAGAAGCTTGAAAAACTCAAAACGAAGGCCAGGGAAGACGGGGCGCTTGAAAATTGCACTACATTCGAAGCCCTCTCTGCATTTGTGTGGAAAGCTCGGACCAGAGCGCTAAATATGCTGCCTGAACAACAAATAAAGCTCATGTTTGCTGTTGACGGGAGGCCTAAATTCAGCCCGCCGCTGCCAAAAGGGTACTTTGGCAACGGCATTGTACTGACAAATTCCATCTGCCAGGCAGGTGACTTGCTGGACAAGCCACTGTCAAATGCAATCGGACTAGTTCAAGATGCAATCAAGATAGTCGCTGACAGTTACATGAGATCCGCCATAGATTATTTCGAGCTGACGCGAGCTAGGCCTTCGTTGGCCTCCACACTCTTGATCACGACTTGGTCTAGGCTGTCGTTCTACACCACTGATTTTGGTTGGGGAGAGCCTGTGCTCTCGGGCCCGGTGGCATTGCCGGAGAAGGAAGTGATCTTGTTCCTATCTAATGGAACAGAAAAGAAGAACATAAACGTGCTTCTGGGGCTTCCGGCTTCTGCCATGAATGTCTTTGAAGAACTGATGAATGCCTAG

Protein Analysis

436

Amino Acids

47.93

Weight (kDa)

5.43

Isoelectric Point (pI)

35.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 956
Acc36I ACCTGC 2 cut(s) 642, 956
AccII CGCG 2 cut(s) 29, 1078
AciI CCGC 5 cut(s) 77, 131, 905, 908, 1053
AclWI GGATC 2 cut(s) 705, 1044
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 5 cut(s) 455, 527, 644, 896, 949
AcuI CTGAAG 1 cut(s) 342
AfaI GTAC 6 cut(s) 101, 145, 632, 707, 923, 942
AfeI AGCGCT 1 cut(s) 837
AfiI CCNNNNNNNGG 1 cut(s) 245
AflIII ACRYGT 1 cut(s) 27
AgsI TTSAA 8 cut(s) 83, 160, 214, 460, 740, 779, 1013, 1289
AhlI ACTAGT 1 cut(s) 1006
AjnI CCWGG 3 cut(s) 403, 758, 960
Alw21I GWGCWC 1 cut(s) 1173
Alw26I GTCTC 2 cut(s) 345, 368
AlwI GGATC 2 cut(s) 705, 1044
Ama87I CYCGRG 2 cut(s) 371, 1174
Aor51HI AGCGCT 1 cut(s) 837
AoxI GGCC 7 cut(s) 22, 481, 756, 890, 1085, 1095, 1177
ApaI GGGCCC 1 cut(s) 1181
ApeKI GCWGC 2 cut(s) 847, 910
ApoI RAATTY 5 cut(s) 455, 527, 644, 896, 949
AspA2I CCTAGG 1 cut(s) 620
AspLEI GCGC 3 cut(s) 521, 775, 838
AspS9I GGNCC 5 cut(s) 367, 682, 828, 1177, 1178
AsuC2I CCSGG 2 cut(s) 295, 1181
AsuHPI GGTGA 3 cut(s) 145, 460, 980
AsuII TTCGAA 1 cut(s) 795
AvaI CYCGRG 2 cut(s) 371, 1174
AvaII GGWCC 3 cut(s) 367, 682, 828
AvrII CCTAGG 1 cut(s) 620
BaeGI GKGCMC 1 cut(s) 1181
BalI TGGCCA 1 cut(s) 24
BanII GRGCYC 1 cut(s) 1181
BarI GAAGNNNNNNTAC 4 cut(s) 83, 115, 698, 730
BauI CACGAG 1 cut(s) 538
BbsI GAAGAC 1 cut(s) 771
Bbv12I GWGCWC 1 cut(s) 1173
BbvI GCAGC 2 cut(s) 834, 897
BccI CCATC 2 cut(s) 503, 962
BceAI ACGGC 1 cut(s) 949
BcgI CGANNNNNNTGC 2 cut(s) 775, 809
BciT130I CCWGG 3 cut(s) 405, 760, 962
BclI TGATCA 2 cut(s) 198, 1110
BcnI CCSGG 2 cut(s) 295, 1181
BcoDI GTCTC 2 cut(s) 345, 368
BcuI ACTAGT 1 cut(s) 1006
BfaI CTAG 6 cut(s) 621, 669, 1007, 1083, 1125, 1306
BfoI RGCGCY 3 cut(s) 522, 776, 839
BfuAI ACCTGC 2 cut(s) 642, 956
BglII AGATCT 1 cut(s) 574
BisI GCNGC 3 cut(s) 848, 908, 911
BlnI CCTAGG 1 cut(s) 620
BlsI GCNGC 3 cut(s) 849, 909, 912
Bme1390I CCNGG 5 cut(s) 295, 405, 760, 962, 1181
Bme18I GGWCC 3 cut(s) 367, 682, 828
BmeT110I CYCGRG 2 cut(s) 371, 1174
BmgT120I GGNCC 5 cut(s) 367, 682, 828, 1177, 1178
BmiI GGNNCC 3 cut(s) 69, 369, 1179
BmrFI CCNGG 5 cut(s) 295, 405, 760, 962, 1181
BmsI GCATC 4 cut(s) 157, 196, 646, 1006
BpiI GAAGAC 1 cut(s) 771
BpmI CTGGAG 1 cut(s) 443
Bpu10I CCTNAGC 1 cut(s) 444
Bpu14I TTCGAA 1 cut(s) 795
BpuMI CCSGG 2 cut(s) 295, 1181
BsaJI CCNNGG 3 cut(s) 294, 620, 759
BsaXI ACNNNNNCTCC 2 cut(s) 1152, 1182
Bsc4I CCNNNNNNNGG 1 cut(s) 245
Bse1I ACTGG 2 cut(s) 426, 441
Bse3DI GCAATG 2 cut(s) 126, 1187
BseBI CCWGG 3 cut(s) 405, 760, 962
BseDI CCNNGG 3 cut(s) 294, 620, 759
BseGI GGATG 2 cut(s) 172, 211
BseLI CCNNNNNNNGG 1 cut(s) 245
BseMI GCAATG 2 cut(s) 126, 1187
BseMII CTCAG 4 cut(s) 29, 78, 458, 663
BseNI ACTGG 2 cut(s) 426, 441
BseSI GKGCMC 1 cut(s) 1181
BseXI GCAGC 2 cut(s) 834, 897
Bsh1236I CGCG 2 cut(s) 29, 1078
BshFI GGCC 7 cut(s) 24, 483, 758, 892, 1087, 1097, 1179
BsiHKAI GWGCWC 1 cut(s) 1173
BsiHKCI CYCGRG 2 cut(s) 371, 1174
BsiSI CCGG 5 cut(s) 294, 365, 1181, 1193, 1265
BslI CCNNNNNNNGG 1 cut(s) 245
BsmAI GTCTC 2 cut(s) 345, 368
BsmI GAATGC 1 cut(s) 1306
BsnI GGCC 7 cut(s) 24, 483, 758, 892, 1087, 1097, 1179
BsoBI CYCGRG 2 cut(s) 371, 1174
Bsp119I TTCGAA 1 cut(s) 795
Bsp120I GGGCCC 1 cut(s) 1177
Bsp1286I GDGCHC 2 cut(s) 1173, 1181
Bsp1407I TGTACA 1 cut(s) 705
Bsp143I GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
BspACI CCGC 5 cut(s) 77, 131, 905, 908, 1053
BspANI GGCC 7 cut(s) 24, 483, 758, 892, 1087, 1097, 1179
BspCNI CTCAG 4 cut(s) 30, 79, 457, 662
BspFNI CGCG 2 cut(s) 29, 1078
BspLI GGNNCC 3 cut(s) 69, 369, 1179
BspMI ACCTGC 2 cut(s) 642, 956
BspPI GGATC 2 cut(s) 705, 1044
BspT104I TTCGAA 1 cut(s) 795
BsrDI GCAATG 2 cut(s) 126, 1187
BsrGI TGTACA 1 cut(s) 705
BsrI ACTGG 2 cut(s) 426, 441
BssECI CCNNGG 3 cut(s) 294, 620, 759
BssMI GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
BssSI CACGAG 1 cut(s) 538
BssT1I CCWWGG 1 cut(s) 620
Bst2BI CACGAG 1 cut(s) 538
Bst2UI CCWGG 3 cut(s) 405, 760, 962
Bst4CI ACNGT 4 cut(s) 139, 728, 990, 1040
Bst6I CTCTTC 1 cut(s) 336
BstAUI TGTACA 1 cut(s) 705
BstBI TTCGAA 1 cut(s) 795
BstC8I GCNNGC 2 cut(s) 905, 1080
BstDEI CTNAG 4 cut(s) 38, 87, 444, 649
BstF5I GGATG 2 cut(s) 172, 211
BstFNI CGCG 2 cut(s) 29, 1078
BstH2I RGCGCY 3 cut(s) 522, 776, 839
BstHHI GCGC 3 cut(s) 521, 775, 838
BstKTI GATC 7 cut(s) 121, 201, 577, 713, 1052, 1113, 1209
BstMAI GTCTC 2 cut(s) 345, 368
BstMBI GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
BstMWI GCNNNNNNNGC 7 cut(s) 55, 551, 806, 844, 982, 1084, 1258
BstNI CCWGG 3 cut(s) 405, 760, 962
BstSCI CCNGG 5 cut(s) 293, 403, 758, 960, 1179
BstSLI GKGCMC 1 cut(s) 1181
BstUI CGCG 2 cut(s) 29, 1078
BstV1I GCAGC 2 cut(s) 834, 897
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 3 cut(s) 574, 710, 1049
BstYI RGATCY 3 cut(s) 574, 710, 1049
BsuRI GGCC 7 cut(s) 24, 483, 758, 892, 1087, 1097, 1179
BtsCI GGATG 2 cut(s) 172, 211
BtsIMutI CAGTG 4 cut(s) 434, 733, 986, 1143
BveI ACCTGC 2 cut(s) 642, 956
Cac8I GCNNGC 2 cut(s) 905, 1080
CfoI GCGC 3 cut(s) 521, 775, 838
Cfr13I GGNCC 5 cut(s) 367, 682, 828, 1177, 1178
CseI GACGC 1 cut(s) 1084
Csp6I GTAC 6 cut(s) 100, 144, 631, 706, 922, 941
CspCI CAANNNNNGTGG 4 cut(s) 246, 281, 1132, 1167
CviAII CATG 4 cut(s) 490, 871, 1045, 1276
CviQI GTAC 6 cut(s) 100, 144, 631, 706, 922, 941
DdeI CTNAG 4 cut(s) 38, 87, 444, 649
DpnI GATC 7 cut(s) 120, 200, 576, 712, 1051, 1112, 1208
DpnII GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
EaeI YGGCCR 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
EciI GGCGGA 1 cut(s) 1042
Eco130I CCWWGG 1 cut(s) 620
Eco147I AGGCCT 2 cut(s) 892, 1087
Eco24I GRGCYC 1 cut(s) 1181
Eco47I GGWCC 3 cut(s) 367, 682, 828
Eco47III AGCGCT 1 cut(s) 837
Eco57I CTGAAG 1 cut(s) 342
Eco88I CYCGRG 2 cut(s) 371, 1174
EcoO109I RGGNCCY 1 cut(s) 682
EcoRI GAATTC 2 cut(s) 527, 644
EcoRII CCWGG 3 cut(s) 403, 758, 960
EcoT14I CCWWGG 1 cut(s) 620
EcoT38I GRGCYC 1 cut(s) 1181
ErhI CCWWGG 1 cut(s) 620
FaeI CATG 4 cut(s) 493, 874, 1048, 1279
FatI CATG 4 cut(s) 489, 870, 1044, 1275
FauI CCCGC 1 cut(s) 912
FbaI TGATCA 2 cut(s) 198, 1110
Fnu4HI GCNGC 3 cut(s) 848, 908, 911
FokI GGATG 2 cut(s) 179, 218
FriOI GRGCYC 1 cut(s) 1181
Fsp4HI GCNGC 3 cut(s) 848, 908, 911
FspBI CTAG 6 cut(s) 621, 669, 1007, 1083, 1125, 1306
GlaI GCGC 3 cut(s) 520, 774, 837
GluI GCNGC 3 cut(s) 848, 908, 911
GsuI CTGGAG 1 cut(s) 443
HaeII RGCGCY 3 cut(s) 522, 776, 839
HaeIII GGCC 7 cut(s) 24, 483, 758, 892, 1087, 1097, 1179
HapII CCGG 5 cut(s) 294, 365, 1181, 1193, 1265
HgaI GACGC 1 cut(s) 1084
HhaI GCGC 3 cut(s) 521, 775, 838
Hin1II CATG 4 cut(s) 493, 874, 1048, 1279
Hin6I GCGC 3 cut(s) 519, 773, 836
HinP1I GCGC 3 cut(s) 519, 773, 836
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HindIII AAGCTT 1 cut(s) 734
HinfI GANTC 3 cut(s) 376, 427, 493
HpaII CCGG 5 cut(s) 294, 365, 1181, 1193, 1265
HphI GGTGA 3 cut(s) 145, 460, 980
Hpy166II GTNNAC 4 cut(s) 229, 535, 563, 883
Hpy188I TCNGA 5 cut(s) 123, 166, 652, 828, 1004
Hpy188III TCNNGA 7 cut(s) 109, 532, 641, 1013, 1024, 1108, 1114
Hpy8I GTNNAC 4 cut(s) 229, 535, 563, 883
HpyAV CCTTC 7 cut(s) 85, 211, 293, 724, 748, 1098, 1192
HpyCH4III ACNGT 4 cut(s) 139, 728, 990, 1040
HpyCH4IV ACGT 1 cut(s) 1248
HpyCH4V TGCA 9 cut(s) 170, 291, 410, 489, 637, 786, 809, 998, 1019
HpyF10VI GCNNNNNNNGC 7 cut(s) 55, 551, 806, 844, 982, 1084, 1258
HpyF3I CTNAG 4 cut(s) 38, 87, 444, 649
HpySE526I ACGT 1 cut(s) 1248
Hsp92II CATG 4 cut(s) 493, 874, 1048, 1279
HspAI GCGC 3 cut(s) 519, 773, 836
Ksp22I TGATCA 2 cut(s) 198, 1110
Kzo9I GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
LmnI GCTCC 1 cut(s) 302
Lsp1109I GCAGC 2 cut(s) 834, 897
LweI GCATC 4 cut(s) 157, 196, 646, 1006
MaeI CTAG 6 cut(s) 621, 669, 1007, 1083, 1125, 1306
MaeII ACGT 1 cut(s) 1248
MaeIII GTNAC 4 cut(s) 133, 448, 968, 1040
MalI GATC 7 cut(s) 120, 200, 576, 712, 1051, 1112, 1208
MboI GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
MboII GAAGA 7 cut(s) 226, 353, 569, 704, 776, 1249, 1301
MfeI CAATTG 1 cut(s) 566
MflI RGATCY 3 cut(s) 574, 710, 1049
MhlI GDGCHC 2 cut(s) 1173, 1181
MlsI TGGCCA 1 cut(s) 24
MluCI AATT 8 cut(s) 455, 527, 549, 566, 644, 781, 896, 949
MluI ACGCGT 1 cut(s) 27
MluNI TGGCCA 1 cut(s) 24
MlyI GAGTC 1 cut(s) 370
MmeI TCCRAC 1 cut(s) 144
Mox20I TGGCCA 1 cut(s) 24
MscI TGGCCA 1 cut(s) 24
MslI CAYNNNNRTG 3 cut(s) 131, 814, 1247
Msp20I TGGCCA 1 cut(s) 24
MspA1I CMGCKG 2 cut(s) 37, 910
MspI CCGG 5 cut(s) 294, 365, 1181, 1193, 1265
MspR9I CCNGG 5 cut(s) 295, 405, 760, 962, 1181
MunI CAATTG 1 cut(s) 566
Mva1269I GAATGC 1 cut(s) 1306
MvaI CCWGG 3 cut(s) 405, 760, 962
MvnI CGCG 2 cut(s) 29, 1078
MwoI GCNNNNNNNGC 7 cut(s) 55, 551, 806, 844, 982, 1084, 1258
NciI CCSGG 2 cut(s) 295, 1181
NdeII GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
NlaIII CATG 4 cut(s) 493, 874, 1048, 1279
NlaIV GGNNCC 3 cut(s) 69, 369, 1179
NmuCI GTSAC 3 cut(s) 133, 448, 968
NspV TTCGAA 1 cut(s) 795
PaqCI CACCTGC 1 cut(s) 956
PceI AGGCCT 2 cut(s) 892, 1087
PctI GAATGC 1 cut(s) 1306
PfeI GAWTC 2 cut(s) 427, 493
PflFI GACNNNGTC 1 cut(s) 1120
PkrI GCNGC 3 cut(s) 849, 909, 912
PleI GAGTC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 370
PpuMI RGGWCCY 1 cut(s) 682
Psp5II RGGWCCY 1 cut(s) 682
Psp6I CCWGG 3 cut(s) 403, 758, 960
PspGI CCWGG 3 cut(s) 403, 758, 960
PspN4I GGNNCC 3 cut(s) 69, 369, 1179
PspOMI GGGCCC 1 cut(s) 1177
PspPI GGNCC 5 cut(s) 367, 682, 828, 1177, 1178
PspPPI RGGWCCY 1 cut(s) 682
PsuI RGATCY 3 cut(s) 574, 710, 1049
PsyI GACNNNGTC 1 cut(s) 1120
PvuII CAGCTG 1 cut(s) 37
RsaI GTAC 6 cut(s) 101, 145, 632, 707, 923, 942
RsaNI GTAC 6 cut(s) 100, 144, 631, 706, 922, 941
RseI CAYNNNNRTG 3 cut(s) 131, 814, 1247
SatI GCNGC 3 cut(s) 848, 908, 911
Sau3AI GATC 7 cut(s) 118, 198, 574, 710, 1049, 1110, 1206
Sau96I GGNCC 5 cut(s) 367, 682, 828, 1177, 1178
SchI GAGTC 1 cut(s) 370
ScrFI CCNGG 5 cut(s) 295, 405, 760, 962, 1181
SduI GDGCHC 2 cut(s) 1173, 1181
SfaNI GCATC 4 cut(s) 157, 196, 646, 1006
SfuI TTCGAA 1 cut(s) 795
SinI GGWCC 3 cut(s) 367, 682, 828
SmiMI CAYNNNNRTG 3 cut(s) 131, 814, 1247
SpeI ACTAGT 1 cut(s) 1006
Sse9I AATT 8 cut(s) 455, 527, 549, 566, 644, 781, 896, 949
SseBI AGGCCT 2 cut(s) 892, 1087
SsiI CCGC 5 cut(s) 77, 131, 905, 908, 1053
SspMI CTAG 6 cut(s) 621, 669, 1007, 1083, 1125, 1306
StuI AGGCCT 2 cut(s) 892, 1087
StyD4I CCNGG 5 cut(s) 293, 403, 758, 960, 1179
StyI CCWWGG 1 cut(s) 620
TaaI ACNGT 4 cut(s) 139, 728, 990, 1040
TaiI ACGT 1 cut(s) 1251
TaqI TCGA 6 cut(s) 110, 117, 610, 723, 795, 1068
TasI AATT 8 cut(s) 455, 527, 549, 566, 644, 781, 896, 949
TatI WGTACW 3 cut(s) 99, 705, 940
TauI GCSGC 1 cut(s) 910
TfiI GAWTC 2 cut(s) 427, 493
TscAI CASTG 4 cut(s) 441, 733, 993, 1150
TseFI GTSAC 3 cut(s) 133, 448, 968
TseI GCWGC 2 cut(s) 847, 910
Tsp45I GTSAC 3 cut(s) 133, 448, 968
TspDTI ATGAA 2 cut(s) 506, 1292
TspGWI ACGGA 1 cut(s) 570
TspRI CASTG 4 cut(s) 441, 733, 993, 1150
Tth111I GACNNNGTC 1 cut(s) 1120
VpaK11BI GGWCC 3 cut(s) 367, 682, 828
XapI RAATTY 5 cut(s) 455, 527, 644, 896, 949
XmaJI CCTAGG 1 cut(s) 620
XspI CTAG 6 cut(s) 621, 669, 1007, 1083, 1125, 1306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.