Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003048

Physical Location & Seq

Genomic Coordinates Forward (+)

81304990 .. 81306818

Gene Structure 1829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG643200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGCATATTAAGATTATAAGTCATATATTGTGCATTTGTTTTCATTCCACTTTTCGAGCTTCCAATTCTTACCAATCTTGCCTTTTGTTGTCTACTTTTTTTTTTGACATTATGGTTCAGGTTGTGGAAGCTGGAGATTCTGCTGCAATGAACAACTCCAGTGGGAATGTGTTCCAACTCAAAGTGAAGCAAGGAGAGCCAACTCTGGTTTCCCCTGCAGAAGAAACAGACAAGGGTTTGTACTTCCTCTCTAACCTCGACCAAAACATTGCGGTCACTGTTCGAACTATTTATTGTTTCAAGTCAGATGAGAAAGATAATAGCAAGGCAGGGGAAGTGATCAAGAATGCTCTCAAAAAGGTTCTTGTCCACTATTACCCCCTTGCTGGGCGCCTGTCAATCAGCTCGGAAGGAAAGCTCATTGTAGATTGCACCGGAGAAGGAGCAGTTTTCGTTGAGGCAGAAGCAGATTGTACAATAGAAGATATTGGAGACATAACAAAACCTGATCCGGAGACTCTTGGAAAGCTGGTCTATGACATTCCTGGTGCCAAGAACATACTAGAAGTGCCTCCTCTTGTGGCCCAGGTGACAAAATTCAAATGCGGAGGGTTTTCTCTTGGCCTGTGCATGAACCACTGTATGTTTGATGGCATTGGGGCTATGGAGTTTGTGAACTCATGGGGAGAGACTGCGAGAGGTTTGCCATTAACAGTTGTTCCGTTCATAGACAGAAGCATACTCAAAGCACGAAACCCACCTAAGATAGAGCACCTGCACCAAGAGTTCTCTGAGATTATTGATGGCAATTCTAGCCTTAACTCTTCTGAAGTTGATGAAGACAAGATGCTGTATAGGTCCTTCTGTTTTGACACTGAGAAGCTCGAAAAGCTGAAAACTAAAGCCAGGGAAGACGGCGCTCTTGACAAGTGCTCTACATTTGAAGCCCTCTCAGCATTTGTGTGGAAAGCTCGGACTAGAGCCCTGAGACTCTTGCCTGAACAACAAATCAAGCTCTTGTTTGCTGTTGATGGGAGGCATAAGTTCAACCCACCACTCCCAAACGGGTACTTTGGGAATGGCATTGTGTTGACACATGCAATCTGTGAAGCAGGTGATCTGCTGGAAAAGCCACTGTCACATGCGGTTGGGCTTGTTCAAGATGCCATCAAGATGGTCACTGACAGTTACATGAGATCAGCCATTGACTATTTCGAAGCAACGAGAGCTAGGCCTTCTTTGTCCTCCACTCTTTTGATCACAACTTGGTCTCGGCTTTCATTTTACACCACTGACTTTGGTTGGGGAGAGCCTATACTCTCAGGTCCAGTGGCTTTGCCGGAGAAGGAGGTGATCTTATTCCTGTCTCATGGGACAGAGAAGAAAAGCATTAACGTGCTTTTGGGTCTTCCAGCTTCTGCCATGAAGGTCTTTCAAGAACTGATGAATATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009664 GO:0009698 GO:0009699 GO:0009832 GO:0009987 GO:0010345 GO:0010383 GO:0010393 GO:0016043 GO:0016051 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019438 GO:0019748 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044550 GO:0045229 GO:0045488 GO:0045489 GO:0050734 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

Transferase

Protein Analysis

484

Amino Acids

53.49

Weight (kDa)

5.65

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	61 - 482	1.4e-98	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41040 AT5G41040
fragaria_vesca	FvH4_5g08760 FvH4_5g08760 FvH4_6g53880
malus_domestica	MD06G1137500.v1.1 MD09G1007600.v1.1 MD14G1152300.v1.1 MD17G1011500.v1.1
prunus_persica	Prupe.3G309400_v2.0.a1 Prupe.5G147300_v2.0.a1 Prupe.5G147300_v2.0.a1
pyrus_communis	pycom06g12870 pycom111g00590 pycom17g00620
rosa_chinensis	RchiOBHm_Chr2g0176041 RchiOBHm_Chr7g0189511
rosa_laevigata	RLG00000004605 RLG00000022375
rosa_multiflora	Rmu_co8455597.1_g000001 Rmu_sc0001924.1_g000008 Rmu_sc0033063.1_g000002
rosa_roxburghii	Rroxscaffold_2G00076830 Rroxscaffold_3G00265340
rosa_rugosa	Rorug02G0589800 Rorug02G0589900 Rorug06G0498500 Rorug06G0498500
rosa_samantha	Rh2AG668700 Rh2BG680300 Rh2CG643200 Rh2DG694000 Rh7AG103500 Rh7BG106000 Rh7CG108200 Rh7DG105600
rosa_wichuraiana	Rw2G054840 Rw7G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	17
AarI	CACCTGC	2 cut(s)	783, 1103
Acc36I	ACCTGC	2 cut(s)	783, 1103
AccB1I	GGYRCC	2 cut(s)	390, 548
AccI	GTMKAC	1 cut(s)	92
AccIII	TCCGGA	1 cut(s)	511
AciI	CCGC	3 cut(s)	272, 606, 1145
AclWI	GGATC	1 cut(s)	503
AcsI	RAATTY	1 cut(s)	596
AcuI	CTGAAG	1 cut(s)	849
AcyI	GRCGYC	1 cut(s)	391
AfaI	GTAC	3 cut(s)	242, 475, 1070
AfiI	CCNNNNNNNGG	2 cut(s)	386, 387
AgsI	TTSAA	6 cut(s)	301, 601, 944, 1048, 1160, 1436
AjnI	CCWGG	3 cut(s)	544, 585, 905
AjuI	GAANNNNNNNTTGG	2 cut(s)	193, 225
Alw21I	GWGCWC	2 cut(s)	774, 935
Alw26I	GTCTC	6 cut(s)	486, 509, 683, 982, 1275, 1371
AlwI	GGATC	1 cut(s)	503
AlwNI	CAGNNNCTG	1 cut(s)	1418
Aor13HI	TCCGGA	1 cut(s)	511
AoxI	GGCC	3 cut(s)	582, 622, 1232
ApeKI	GCWGC	1 cut(s)	143
ApoI	RAATTY	1 cut(s)	596
Asp700I	GAANNNNTTC	1 cut(s)	170
AspLEI	GCGC	2 cut(s)	393, 920
AspS9I	GGNCC	3 cut(s)	583, 858, 1325
AsuHPI	GGTGA	3 cut(s)	601, 1127, 1363
AsuII	TTCGAA	2 cut(s)	283, 1215
AvaII	GGWCC	2 cut(s)	858, 1325
BanI	GGYRCC	2 cut(s)	390, 548
BanII	GRGCYC	1 cut(s)	985
BarI	GAAGNNNNNNTAC	2 cut(s)	845, 877
BbsI	GAAGAC	3 cut(s)	846, 918, 1400
Bbv12I	GWGCWC	2 cut(s)	774, 935
BbvI	GCAGC	1 cut(s)	130
BccI	CCATC	5 cut(s)	644, 797, 1025, 1168, 1175
BceAI	ACGGC	1 cut(s)	931
BcgI	CGANNNNNNTGC	2 cut(s)	685, 719
BciT130I	CCWGG	3 cut(s)	546, 587, 907
BclI	TGATCA	2 cut(s)	339, 1257
BcoDI	GTCTC	6 cut(s)	486, 509, 683, 982, 1275, 1371
BfaI	CTAG	4 cut(s)	563, 813, 978, 1230
BfmI	CTRYAG	1 cut(s)	216
BfoI	RGCGCY	2 cut(s)	394, 921
BfuAI	ACCTGC	2 cut(s)	783, 1103
BisI	GCNGC	1 cut(s)	144
BlsI	GCNGC	1 cut(s)	145
Bme1390I	CCNGG	3 cut(s)	546, 587, 907
Bme18I	GGWCC	2 cut(s)	858, 1325
BmgT120I	GGNCC	3 cut(s)	583, 858, 1325
BmiI	GGNNCC	2 cut(s)	392, 550
BmrFI	CCNGG	3 cut(s)	546, 587, 907
BmsI	GCATC	2 cut(s)	837, 1153
BpiI	GAAGAC	3 cut(s)	846, 918, 1400
BpmI	CTGGAG	2 cut(s)	142, 153
Bpu14I	TTCGAA	2 cut(s)	283, 1215
BsaHI	GRCGYC	1 cut(s)	391
BsaI	GGTCTC	1 cut(s)	1275
BsaJI	CCNNGG	2 cut(s)	585, 906
BsaWI	WCCGGW	2 cut(s)	434, 511
Bsc4I	CCNNNNNNNGG	2 cut(s)	386, 387
Bse1I	ACTGG	2 cut(s)	159, 1328
Bse3DI	GCAATG	2 cut(s)	153, 267
BseAI	TCCGGA	1 cut(s)	511
BseBI	CCWGG	3 cut(s)	546, 587, 907
BseDI	CCNNGG	2 cut(s)	585, 906
BseLI	CCNNNNNNNGG	2 cut(s)	386, 387
BseMI	GCAATG	2 cut(s)	153, 267
BseMII	CTCAG	5 cut(s)	783, 867, 966, 977, 1335
BseNI	ACTGG	2 cut(s)	159, 1328
BseRI	GAGGAG	1 cut(s)	564
BseXI	GCAGC	1 cut(s)	130
BseYI	CCCAGC	1 cut(s)	386
BsgI	GTGCAG	1 cut(s)	761
BshFI	GGCC	3 cut(s)	584, 624, 1234
BshNI	GGYRCC	2 cut(s)	390, 548
BsiHKAI	GWGCWC	2 cut(s)	774, 935
BsiSI	CCGG	3 cut(s)	435, 512, 1340
BslFI	GGGAC	1 cut(s)	1387
BslI	CCNNNNNNNGG	2 cut(s)	386, 387
BsmAI	GTCTC	6 cut(s)	486, 509, 683, 982, 1275, 1371
BsmFI	GGGAC	1 cut(s)	1387
BsmI	GAATGC	1 cut(s)	352
BsnI	GGCC	3 cut(s)	584, 624, 1234
Bso31I	GGTCTC	1 cut(s)	1275
Bsp119I	TTCGAA	2 cut(s)	283, 1215
Bsp1286I	GDGCHC	3 cut(s)	774, 935, 985
Bsp13I	TCCGGA	1 cut(s)	511
Bsp1407I	TGTACA	1 cut(s)	473
Bsp143I	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
BspACI	CCGC	3 cut(s)	272, 606, 1145
BspANI	GGCC	3 cut(s)	584, 624, 1234
BspCNI	CTCAG	5 cut(s)	784, 868, 965, 978, 1334
BspEI	TCCGGA	1 cut(s)	511
BspLI	GGNNCC	2 cut(s)	392, 550
BspMAI	CTGCAG	1 cut(s)	220
BspMI	ACCTGC	2 cut(s)	783, 1103
BspPI	GGATC	1 cut(s)	503
BspT104I	TTCGAA	2 cut(s)	283, 1215
BspT107I	GGYRCC	2 cut(s)	390, 548
BspTNI	GGTCTC	1 cut(s)	1275
BsrDI	GCAATG	2 cut(s)	153, 267
BsrGI	TGTACA	1 cut(s)	473
BsrI	ACTGG	2 cut(s)	159, 1328
BssECI	CCNNGG	2 cut(s)	585, 906
BssMI	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
BssNI	GRCGYC	1 cut(s)	391
Bst2UI	CCWGG	3 cut(s)	546, 587, 907
Bst4CI	ACNGT	5 cut(s)	280, 641, 715, 1137, 1187
Bst6I	CTCTTC	1 cut(s)	829
BstACI	GRCGYC	1 cut(s)	391
BstAUI	TGTACA	1 cut(s)	473
BstBI	TTCGAA	2 cut(s)	283, 1215
BstDEI	CTNAG	6 cut(s)	762, 792, 876, 952, 986, 1321
BstH2I	RGCGCY	2 cut(s)	394, 921
BstHHI	GCGC	2 cut(s)	393, 920
BstKTI	GATC	6 cut(s)	342, 511, 1120, 1199, 1260, 1356
BstMAI	GTCTC	6 cut(s)	486, 509, 683, 982, 1275, 1371
BstMBI	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
BstMWI	GCNNNNNNNGC	6 cut(s)	196, 813, 889, 953, 1129, 1226
BstNI	CCWGG	3 cut(s)	546, 587, 907
BstNSI	RCATGY	2 cut(s)	1100, 1145
BstSCI	CCNGG	3 cut(s)	544, 585, 905
BstSFI	CTRYAG	1 cut(s)	216
BstV1I	GCAGC	1 cut(s)	130
BstV2I	GAAGAC	3 cut(s)	846, 918, 1400
BstXI	CCANNNNNNTGG	1 cut(s)	1174
BsuRI	GGCC	3 cut(s)	584, 624, 1234
BtsIMutI	CAGTG	8 cut(s)	166, 276, 637, 873, 1133, 1179, 1290, 1335
BveI	ACCTGC	2 cut(s)	783, 1103
CaiI	CAGNNNCTG	1 cut(s)	1418
CfoI	GCGC	2 cut(s)	393, 920
Cfr13I	GGNCC	3 cut(s)	583, 858, 1325
Csp6I	GTAC	3 cut(s)	241, 474, 1069
CspCI	CAANNNNNGTGG	4 cut(s)	142, 177, 1279, 1314
CviAII	CATG	7 cut(s)	631, 681, 1097, 1142, 1192, 1370, 1423
CviQI	GTAC	3 cut(s)	241, 474, 1069
DdeI	CTNAG	6 cut(s)	762, 792, 876, 952, 986, 1321
DinI	GGCGCC	1 cut(s)	392
DpnI	GATC	6 cut(s)	341, 510, 1119, 1198, 1259, 1355
DpnII	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
Eam1104I	CTCTTC	1 cut(s)	829
EarI	CTCTTC	1 cut(s)	829
Eco147I	AGGCCT	1 cut(s)	1234
Eco24I	GRGCYC	1 cut(s)	985
Eco31I	GGTCTC	1 cut(s)	1275
Eco47I	GGWCC	2 cut(s)	858, 1325
Eco57I	CTGAAG	1 cut(s)	849
EcoO109I	RGGNCCY	1 cut(s)	858
EcoRII	CCWGG	3 cut(s)	544, 585, 905
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	985
EgeI	GGCGCC	1 cut(s)	392
EheI	GGCGCC	1 cut(s)	392
FaeI	CATG	7 cut(s)	634, 684, 1100, 1145, 1195, 1373, 1426
FaqI	GGGAC	1 cut(s)	1387
FatI	CATG	7 cut(s)	630, 680, 1096, 1141, 1191, 1369, 1422
FbaI	TGATCA	2 cut(s)	339, 1257
FblI	GTMKAC	1 cut(s)	92
Fnu4HI	GCNGC	1 cut(s)	144
FriOI	GRGCYC	1 cut(s)	985
Fsp4HI	GCNGC	1 cut(s)	144
FspBI	CTAG	4 cut(s)	563, 813, 978, 1230
GlaI	GCGC	2 cut(s)	392, 919
GluI	GCNGC	1 cut(s)	144
GsaI	CCCAGC	1 cut(s)	390
GsuI	CTGGAG	2 cut(s)	142, 153
HaeII	RGCGCY	2 cut(s)	394, 921
HaeIII	GGCC	3 cut(s)	584, 624, 1234
HapII	CCGG	3 cut(s)	435, 512, 1340
HhaI	GCGC	2 cut(s)	393, 920
Hin1I	GRCGYC	1 cut(s)	391
Hin1II	CATG	7 cut(s)	634, 684, 1100, 1145, 1195, 1373, 1426
Hin6I	GCGC	2 cut(s)	391, 918
HinP1I	GCGC	2 cut(s)	391, 918
HincII	GTYRAC	1 cut(s)	1092
HindII	GTYRAC	1 cut(s)	1092
HinfI	GANTC	3 cut(s)	137, 517, 990
HpaII	CCGG	3 cut(s)	435, 512, 1340
HphI	GGTGA	3 cut(s)	601, 1127, 1363
Hpy166II	GTNNAC	4 cut(s)	93, 370, 676, 1092
Hpy188I	TCNGA	5 cut(s)	307, 409, 793, 829, 975
Hpy188III	TCNNGA	6 cut(s)	343, 512, 923, 1160, 1171, 1436
Hpy8I	GTNNAC	4 cut(s)	93, 370, 676, 1092
HpyAV	CCTTC	6 cut(s)	404, 434, 871, 1245, 1339, 1420
HpyCH4III	ACNGT	5 cut(s)	280, 641, 715, 1137, 1187
HpyCH4IV	ACGT	1 cut(s)	1395
HpyCH4V	TGCA	8 cut(s)	4, 33, 146, 218, 432, 630, 778, 1100
HpyF10VI	GCNNNNNNNGC	6 cut(s)	196, 813, 889, 953, 1129, 1226
HpyF3I	CTNAG	6 cut(s)	762, 792, 876, 952, 986, 1321
HpySE526I	ACGT	1 cut(s)	1395
Hsp92I	GRCGYC	1 cut(s)	391
Hsp92II	CATG	7 cut(s)	634, 684, 1100, 1145, 1195, 1373, 1426
HspAI	GCGC	2 cut(s)	391, 918
KasI	GGCGCC	1 cut(s)	390
Kpn2I	TCCGGA	1 cut(s)	511
Ksp22I	TGATCA	2 cut(s)	339, 1257
Kzo9I	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
LmnI	GCTCC	1 cut(s)	443
Lsp1109I	GCAGC	1 cut(s)	130
LweI	GCATC	2 cut(s)	837, 1153
MaeI	CTAG	4 cut(s)	563, 813, 978, 1230
MaeII	ACGT	1 cut(s)	1395
MaeIII	GTNAC	5 cut(s)	274, 589, 1137, 1177, 1187
MalI	GATC	6 cut(s)	341, 510, 1119, 1198, 1259, 1355
MboI	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
MboII	GAAGA	7 cut(s)	233, 494, 816, 851, 923, 1393, 1400
MhlI	GDGCHC	3 cut(s)	774, 935, 985
MluCI	AATT	3 cut(s)	64, 596, 808
Mly113I	GGCGCC	1 cut(s)	391
MlyI	GAGTC	2 cut(s)	511, 984
MmeI	TCCRAC	1 cut(s)	199
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	511
MroXI	GAANNNNTTC	1 cut(s)	170
MseI	TTAA	4 cut(s)	9, 710, 819, 1392
MslI	CAYNNNNRTG	3 cut(s)	961, 1172, 1394
MspI	CCGG	3 cut(s)	435, 512, 1340
MspR9I	CCNGG	3 cut(s)	546, 587, 907
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	3 cut(s)	546, 587, 907
MwoI	GCNNNNNNNGC	6 cut(s)	196, 813, 889, 953, 1129, 1226
NarI	GGCGCC	1 cut(s)	391
NdeII	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
NlaIII	CATG	7 cut(s)	634, 684, 1100, 1145, 1195, 1373, 1426
NlaIV	GGNNCC	2 cut(s)	392, 550
NmeAIII	GCCGAG	1 cut(s)	1252
NmuCI	GTSAC	4 cut(s)	274, 589, 1137, 1177
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	1100, 1145
NspV	TTCGAA	2 cut(s)	283, 1215
PaqCI	CACCTGC	2 cut(s)	783, 1103
PceI	AGGCCT	1 cut(s)	1234
PctI	GAATGC	1 cut(s)	352
PdmI	GAANNNNTTC	1 cut(s)	170
PfeI	GAWTC	1 cut(s)	137
PkrI	GCNGC	1 cut(s)	145
PleI	GAGTC	2 cut(s)	511, 984
PluTI	GGCGCC	1 cut(s)	394
PpsI	GAGTC	2 cut(s)	511, 984
PpuMI	RGGWCCY	1 cut(s)	858
PsiI	TTATAA	1 cut(s)	17
Psp5II	RGGWCCY	1 cut(s)	858
Psp6I	CCWGG	3 cut(s)	544, 585, 905
PspFI	CCCAGC	1 cut(s)	386
PspGI	CCWGG	3 cut(s)	544, 585, 905
PspN4I	GGNNCC	2 cut(s)	392, 550
PspPI	GGNCC	3 cut(s)	583, 858, 1325
PspPPI	RGGWCCY	1 cut(s)	858
PstI	CTGCAG	1 cut(s)	220
PstNI	CAGNNNCTG	1 cut(s)	1418
RsaI	GTAC	3 cut(s)	242, 475, 1070
RsaNI	GTAC	3 cut(s)	241, 474, 1069
RseI	CAYNNNNRTG	3 cut(s)	961, 1172, 1394
SaqAI	TTAA	4 cut(s)	9, 710, 819, 1392
SatI	GCNGC	1 cut(s)	144
Sau3AI	GATC	6 cut(s)	339, 508, 1117, 1196, 1257, 1353
Sau96I	GGNCC	3 cut(s)	583, 858, 1325
SchI	GAGTC	2 cut(s)	511, 984
ScrFI	CCNGG	3 cut(s)	546, 587, 907
SduI	GDGCHC	3 cut(s)	774, 935, 985
SfaNI	GCATC	2 cut(s)	837, 1153
SfcI	CTRYAG	1 cut(s)	216
SfoI	GGCGCC	1 cut(s)	392
SfuI	TTCGAA	2 cut(s)	283, 1215
SinI	GGWCC	2 cut(s)	858, 1325
SmiMI	CAYNNNNRTG	3 cut(s)	961, 1172, 1394
Sse9I	AATT	3 cut(s)	64, 596, 808
SseBI	AGGCCT	1 cut(s)	1234
SsiI	CCGC	3 cut(s)	272, 606, 1145
SspDI	GGCGCC	1 cut(s)	390
SspMI	CTAG	4 cut(s)	563, 813, 978, 1230
StuI	AGGCCT	1 cut(s)	1234
StyD4I	CCNGG	3 cut(s)	544, 585, 905
TaaI	ACNGT	5 cut(s)	280, 641, 715, 1137, 1187
TaiI	ACGT	1 cut(s)	1398
TaqI	TCGA	5 cut(s)	55, 258, 283, 885, 1215
TasI	AATT	3 cut(s)	64, 596, 808
TatI	WGTACW	2 cut(s)	240, 473
TfiI	GAWTC	1 cut(s)	137
Tru1I	TTAA	4 cut(s)	9, 710, 819, 1392
Tru9I	TTAA	4 cut(s)	9, 710, 819, 1392
TscAI	CASTG	8 cut(s)	166, 283, 644, 880, 1140, 1186, 1297, 1335
TseFI	GTSAC	4 cut(s)	274, 589, 1137, 1177
TseI	GCWGC	1 cut(s)	143
Tsp45I	GTSAC	4 cut(s)	274, 589, 1137, 1177
TspDTI	ATGAA	7 cut(s)	32, 164, 647, 715, 852, 1269, 1439
TspGWI	ACGGA	1 cut(s)	711
TspRI	CASTG	8 cut(s)	166, 283, 644, 880, 1140, 1186, 1297, 1335
VpaK11BI	GGWCC	2 cut(s)	858, 1325
XapI	RAATTY	1 cut(s)	596
XceI	RCATGY	2 cut(s)	1100, 1145
XmiI	GTMKAC	1 cut(s)	92
XmnI	GAANNNNTTC	1 cut(s)	170
XspI	CTAG	4 cut(s)	563, 813, 978, 1230
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.