MD17G1011500.v1.1

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
722382 .. 724251
1870 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1011500.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGGTTGCTGAATTCGGAAAGCCTGTCGCGATGGACAACACCACTAATGGTGACGCGTTCGAGCTGAGAGTGAAGCAAGGAAAGCCAACTCTGGTTTCCCCTGCAGTTGAAACGGAGAAGGGTTTGTACTTCCTCTCGAACCTCGACCAAAACATTGCGGTGACTGTTCGTACTATTTACTGCTTCAAGTCGGTTGATAAGGGAAATGACGAGGCAGGGGAAGTGATCAAGGATGCTTTGAAGAAGGTTCTTGTCCACTACTACCCTCTTGCTGGGCGGTTAGCAATTAGCGCGGAGGGAAAGCTCATTGTGGATTGCACGGGGGAAGGAGCTGTTTTCGTCGAGGCTGAAACAGATTGCGCGATAGAAGAGATTGGTGACACAACAAAGCCGGACCCCGAGACTCTTGGGAAGCTGGTTTATGATGTTCCGGGTGCAAAAAACATACTGGAGATGCCTCCTCTGGTGGTTCAGGTGACTAAATTCAAATGTGGAGGATTTTCTCTTGGCCTGTGCATGAATCATTGTATGTTTGATGGCATCGGTGCAATGGAATTCGTGAACTCGTGGGGTAAAATTGCCAGAGGTTTGCCATTGACAGCTCCTCCATTTTTAGACAGAAGCATACTCAAGGCGCGAAACCCACCTAGGATAGAGTACCCGCATCATGAATTCTCAGAGATTACCGGCACTTCTAGCACCAACAATGACCTTTGTGAGGAAAAAATGCTGTACAGATCCTTCAGTTTCGACAGTGAGAAGCTTGAAAAACTCAAAATGAAGGCCAGGGAAGAGGGGGCGCTTGAAAATTGCACTACTTTCGAAGCCCTCTCTGCATTCGTGTGGAAAGCTCGGACCAGAGCGCTAAATCTGCTGCCTGAGCAGCAAATAAAGCTCCTGTTTGCTGTTGACGGGAGGCCTAAATTCAGGCCGCCGCTGCCAAAAGGGTACTTTGGCAACGGCATTGTGCTGACAAATTCCATCTGCCAGGCAGGTGACTTGCTGGACAAACCGCTGTCAAATGCAGTCGGACTCGTTCAAGATGCAATCAAGATGGTCACTGACAGTTACATGAGATCTGCCATAGATTATTTCGAGCTGACGCGAGCTAGACCTTCGTTGGCCTCCACACTCTTGATCACGACTTGGTCTAAGCTGTCGTTCTACACCACTGATTTTGGTTGGGGAGAGCCCGTGCTATCGGGTCCGGTGGCATTGCCGGAGAAGGAAGTGATCTTGTTCCTTTCTAATGGGACGGAAAAGAAGATCATAAACGTGCTTTTGGGGCTTCCAGCTTCTGCCATGAATGTCTTTCAAGAACTGATGAACGTCTAG

Protein Analysis

445

Amino Acids

48.85

Weight (kDa)

5.44

Isoelectric Point (pI)

33.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 27 - 442 2.6e-96 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 983
AccII CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
AciI CCGC 7 cut(s) 158, 277, 293, 662, 932, 935, 1013
AclWI GGATC 1 cut(s) 732
AcsI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
AcuI CTGAAG 1 cut(s) 727
AfaI GTAC 5 cut(s) 128, 172, 659, 734, 950
AfeI AGCGCT 1 cut(s) 864
AfiI CCNNNNNNNGG 2 cut(s) 272, 718
AflIII ACRYGT 1 cut(s) 54
AgsI TTSAA 8 cut(s) 110, 187, 241, 487, 767, 806, 1040, 1316
AjnI CCWGG 2 cut(s) 785, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 79, 111
Alw26I GTCTC 1 cut(s) 395
AlwI GGATC 1 cut(s) 732
AlwNI CAGNNNCTG 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 398
Aor51HI AGCGCT 1 cut(s) 864
AoxI GGCC 5 cut(s) 508, 783, 917, 929, 1122
ApeKI GCWGC 3 cut(s) 874, 883, 937
ApoI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
AspA2I CCTAGG 1 cut(s) 647
AspLEI GCGC 5 cut(s) 293, 362, 637, 802, 865
AspS9I GGNCC 3 cut(s) 394, 855, 1205
AsuC2I CCSGG 1 cut(s) 432
AsuHPI GGTGA 5 cut(s) 62, 172, 389, 487, 1007
AsuII TTCGAA 1 cut(s) 822
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 3 cut(s) 394, 855, 1205
AvrII CCTAGG 1 cut(s) 647
BanII GRGCYC 1 cut(s) 1194
BarI GAAGNNNNNNTAC 4 cut(s) 110, 142, 725, 757
BauI CACGAG 1 cut(s) 565
BbvI GCAGC 3 cut(s) 861, 895, 924
BccI CCATC 4 cut(s) 25, 530, 989, 1048
BceAI ACGGC 1 cut(s) 976
BcgI CGANNNNNNTGC 2 cut(s) 802, 836
BciT130I CCWGG 2 cut(s) 787, 989
BclI TGATCA 2 cut(s) 225, 1137
BcnI CCSGG 1 cut(s) 432
BcoDI GTCTC 1 cut(s) 395
BfaI CTAG 4 cut(s) 648, 696, 1110, 1333
BfmI CTRYAG 1 cut(s) 102
BfoI RGCGCY 2 cut(s) 803, 866
BfuAI ACCTGC 1 cut(s) 983
BglII AGATCT 1 cut(s) 1076
BisI GCNGC 5 cut(s) 875, 884, 932, 935, 938
BlnI CCTAGG 1 cut(s) 647
BlsI GCNGC 5 cut(s) 876, 885, 933, 936, 939
Bme1390I CCNGG 3 cut(s) 432, 787, 989
Bme18I GGWCC 3 cut(s) 394, 855, 1205
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 3 cut(s) 394, 855, 1205
BmiI GGNNCC 2 cut(s) 396, 1206
BmrFI CCNGG 3 cut(s) 432, 787, 989
BmsI GCATC 5 cut(s) 223, 444, 549, 673, 1033
BpmI CTGGAG 1 cut(s) 470
Bpu10I CCTNAGC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 822
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 1 cut(s) 432
BsaJI CCNNGG 2 cut(s) 647, 786
BsaWI WCCGGW 1 cut(s) 1207
BsaXI ACNNNNNCTCC 4 cut(s) 589, 619, 1179, 1209
Bsc4I CCNNNNNNNGG 2 cut(s) 272, 718
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 1 cut(s) 453
Bse3DI GCAATG 3 cut(s) 153, 555, 1214
BseBI CCWGG 2 cut(s) 787, 989
BseDI CCNNGG 2 cut(s) 647, 786
BseGI GGATG 1 cut(s) 238
BseLI CCNNNNNNNGG 2 cut(s) 272, 718
BseMI GCAATG 3 cut(s) 153, 555, 1214
BseMII CTCAG 3 cut(s) 56, 690, 870
BseNI ACTGG 1 cut(s) 453
BseRI GAGGAG 2 cut(s) 450, 594
BseXI GCAGC 3 cut(s) 861, 895, 924
BseYI CCCAGC 1 cut(s) 272
Bsh1236I CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
BshFI GGCC 5 cut(s) 510, 785, 919, 931, 1124
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 5 cut(s) 392, 431, 687, 1208, 1220
BslFI GGGAC 1 cut(s) 1267
BslI CCNNNNNNNGG 2 cut(s) 272, 718
BsmAI GTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 1267
BsmI GAATGC 1 cut(s) 836
BsnI GGCC 5 cut(s) 510, 785, 919, 931, 1124
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 1 cut(s) 822
Bsp1286I GDGCHC 1 cut(s) 1194
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
Bsp68I TCGCGA 1 cut(s) 29
BspACI CCGC 7 cut(s) 158, 277, 293, 662, 932, 935, 1013
BspANI GGCC 5 cut(s) 510, 785, 919, 931, 1124
BspCNI CTCAG 3 cut(s) 57, 689, 871
BspFNI CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
BspHI TCATGA 1 cut(s) 667
BspLI GGNNCC 2 cut(s) 396, 1206
BspMAI CTGCAG 1 cut(s) 106
BspMI ACCTGC 1 cut(s) 983
BspPI GGATC 1 cut(s) 732
BspT104I TTCGAA 1 cut(s) 822
BsrDI GCAATG 3 cut(s) 153, 555, 1214
BsrFI RCCGGY 1 cut(s) 686
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 1 cut(s) 453
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 2 cut(s) 647, 786
BssMI GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
BssSI CACGAG 1 cut(s) 565
BssT1I CCWWGG 1 cut(s) 647
Bst2BI CACGAG 1 cut(s) 565
Bst2UI CCWGG 2 cut(s) 787, 989
Bst4CI ACNGT 3 cut(s) 166, 755, 1067
Bst6I CTCTTC 2 cut(s) 363, 786
BstAUI TGTACA 1 cut(s) 732
BstBI TTCGAA 1 cut(s) 822
BstC8I GCNNGC 1 cut(s) 1107
BstDEI CTNAG 4 cut(s) 65, 676, 879, 1152
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 1 cut(s) 238
BstFNI CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
BstH2I RGCGCY 2 cut(s) 803, 866
BstHHI GCGC 5 cut(s) 293, 362, 637, 802, 865
BstKTI GATC 6 cut(s) 228, 740, 1079, 1140, 1236, 1269
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
BstNI CCWGG 2 cut(s) 787, 989
BstSCI CCNGG 3 cut(s) 430, 785, 987
BstSFI CTRYAG 1 cut(s) 102
BstUI CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
BstV1I GCAGC 3 cut(s) 861, 895, 924
BstX2I RGATCY 2 cut(s) 737, 1076
BstYI RGATCY 2 cut(s) 737, 1076
BsuRI GGCC 5 cut(s) 510, 785, 919, 931, 1124
BtgZI GCGATG 1 cut(s) 44
BtsCI GGATG 1 cut(s) 238
BtsIMutI CAGTG 3 cut(s) 760, 1059, 1170
BtuMI TCGCGA 1 cut(s) 29
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 1 cut(s) 1107
CaiI CAGNNNCTG 1 cut(s) 1298
CciI TCATGA 1 cut(s) 667
CfoI GCGC 5 cut(s) 293, 362, 637, 802, 865
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 3 cut(s) 394, 855, 1205
CseI GACGC 2 cut(s) 62, 1111
Csp6I GTAC 5 cut(s) 127, 171, 658, 733, 949
CspCI CAANNNNNGTGG 2 cut(s) 1159, 1194
CviAII CATG 4 cut(s) 517, 668, 1072, 1303
CviQI GTAC 5 cut(s) 127, 171, 658, 733, 949
DdeI CTNAG 4 cut(s) 65, 676, 879, 1152
DpnI GATC 6 cut(s) 227, 739, 1078, 1139, 1235, 1268
DpnII GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
Eam1104I CTCTTC 2 cut(s) 363, 786
EarI CTCTTC 2 cut(s) 363, 786
Eco130I CCWWGG 1 cut(s) 647
Eco147I AGGCCT 1 cut(s) 919
Eco24I GRGCYC 1 cut(s) 1194
Eco47I GGWCC 3 cut(s) 394, 855, 1205
Eco47III AGCGCT 1 cut(s) 864
Eco57I CTGAAG 1 cut(s) 727
Eco88I CYCGRG 1 cut(s) 398
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoRI GAATTC 3 cut(s) 11, 554, 671
EcoRII CCWGG 2 cut(s) 785, 987
EcoT14I CCWWGG 1 cut(s) 647
EcoT38I GRGCYC 1 cut(s) 1194
ErhI CCWWGG 1 cut(s) 647
FaeI CATG 4 cut(s) 520, 671, 1075, 1306
FaqI GGGAC 1 cut(s) 1267
FatI CATG 4 cut(s) 516, 667, 1071, 1302
FauI CCCGC 1 cut(s) 669
FbaI TGATCA 2 cut(s) 225, 1137
Fnu4HI GCNGC 5 cut(s) 875, 884, 932, 935, 938
FokI GGATG 1 cut(s) 245
FriOI GRGCYC 1 cut(s) 1194
Fsp4HI GCNGC 5 cut(s) 875, 884, 932, 935, 938
FspBI CTAG 4 cut(s) 648, 696, 1110, 1333
GlaI GCGC 5 cut(s) 292, 361, 636, 801, 864
GluI GCNGC 5 cut(s) 875, 884, 932, 935, 938
GsaI CCCAGC 1 cut(s) 276
GsuI CTGGAG 1 cut(s) 470
HaeII RGCGCY 2 cut(s) 803, 866
HaeIII GGCC 5 cut(s) 510, 785, 919, 931, 1124
HapII CCGG 5 cut(s) 392, 431, 687, 1208, 1220
HgaI GACGC 2 cut(s) 62, 1111
HhaI GCGC 5 cut(s) 293, 362, 637, 802, 865
Hin1II CATG 4 cut(s) 520, 671, 1075, 1306
Hin6I GCGC 5 cut(s) 291, 360, 635, 800, 863
HinP1I GCGC 5 cut(s) 291, 360, 635, 800, 863
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 1 cut(s) 761
HinfI GANTC 3 cut(s) 403, 520, 1032
HpaII CCGG 5 cut(s) 392, 431, 687, 1208, 1220
HphI GGTGA 5 cut(s) 62, 172, 389, 487, 1007
Hpy166II GTNNAC 3 cut(s) 256, 562, 910
Hpy188I TCNGA 4 cut(s) 17, 679, 855, 1031
Hpy188III TCNNGA 9 cut(s) 28, 136, 559, 668, 1040, 1051, 1135, 1141, 1316
Hpy8I GTNNAC 3 cut(s) 256, 562, 910
Hpy99I CGWCG 1 cut(s) 344
HpyAV CCTTC 7 cut(s) 112, 238, 320, 751, 775, 1125, 1219
HpyCH4III ACNGT 3 cut(s) 166, 755, 1067
HpyCH4IV ACGT 2 cut(s) 1275, 1329
HpyCH4V TGCA 9 cut(s) 104, 318, 437, 516, 548, 813, 836, 1025, 1046
HpyF3I CTNAG 4 cut(s) 65, 676, 879, 1152
HpySE526I ACGT 2 cut(s) 1275, 1329
Hsp92II CATG 4 cut(s) 520, 671, 1075, 1306
HspAI GCGC 5 cut(s) 291, 360, 635, 800, 863
Ksp22I TGATCA 2 cut(s) 225, 1137
Kzo9I GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
LmnI GCTCC 3 cut(s) 329, 607, 900
Lsp1109I GCAGC 3 cut(s) 861, 895, 924
LweI GCATC 5 cut(s) 223, 444, 549, 673, 1033
MaeI CTAG 4 cut(s) 648, 696, 1110, 1333
MaeII ACGT 2 cut(s) 1275, 1329
MaeIII GTNAC 7 cut(s) 50, 160, 377, 475, 995, 1057, 1067
MalI GATC 6 cut(s) 227, 739, 1078, 1139, 1235, 1268
MboI GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
MboII GAAGA 4 cut(s) 253, 380, 803, 1276
MflI RGATCY 2 cut(s) 737, 1076
MhlI GDGCHC 1 cut(s) 1194
MluCI AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
MluI ACGCGT 1 cut(s) 54
MlyI GAGTC 2 cut(s) 397, 1026
MmeI TCCRAC 1 cut(s) 1009
MslI CAYNNNNRTG 3 cut(s) 158, 841, 1274
MspA1I CMGCKG 2 cut(s) 937, 1015
MspI CCGG 5 cut(s) 392, 431, 687, 1208, 1220
MspR9I CCNGG 3 cut(s) 432, 787, 989
Mva1269I GAATGC 1 cut(s) 836
MvaI CCWGG 2 cut(s) 787, 989
MvnI CGCG 6 cut(s) 29, 56, 293, 362, 637, 1105
NciI CCSGG 1 cut(s) 432
NdeII GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
NlaIII CATG 4 cut(s) 520, 671, 1075, 1306
NlaIV GGNNCC 2 cut(s) 396, 1206
NmuCI GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
NruI TCGCGA 1 cut(s) 29
NspV TTCGAA 1 cut(s) 822
PagI TCATGA 1 cut(s) 667
PaqCI CACCTGC 1 cut(s) 983
PceI AGGCCT 1 cut(s) 919
PctI GAATGC 1 cut(s) 836
PfeI GAWTC 1 cut(s) 520
PflFI GACNNNGTC 1 cut(s) 1147
PkrI GCNGC 5 cut(s) 876, 885, 933, 936, 939
PleI GAGTC 2 cut(s) 397, 1026
PpsI GAGTC 2 cut(s) 397, 1026
Psp6I CCWGG 2 cut(s) 785, 987
PspFI CCCAGC 1 cut(s) 272
PspGI CCWGG 2 cut(s) 785, 987
PspN4I GGNNCC 2 cut(s) 396, 1206
PspPI GGNCC 3 cut(s) 394, 855, 1205
PstI CTGCAG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 737, 1076
PsyI GACNNNGTC 1 cut(s) 1147
RruI TCGCGA 1 cut(s) 29
RsaI GTAC 5 cut(s) 128, 172, 659, 734, 950
RsaNI GTAC 5 cut(s) 127, 171, 658, 733, 949
RseI CAYNNNNRTG 3 cut(s) 158, 841, 1274
SatI GCNGC 5 cut(s) 875, 884, 932, 935, 938
Sau3AI GATC 6 cut(s) 225, 737, 1076, 1137, 1233, 1266
Sau96I GGNCC 3 cut(s) 394, 855, 1205
SchI GAGTC 2 cut(s) 397, 1026
ScrFI CCNGG 3 cut(s) 432, 787, 989
SduI GDGCHC 1 cut(s) 1194
SfaNI GCATC 5 cut(s) 223, 444, 549, 673, 1033
SfcI CTRYAG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 822
SinI GGWCC 3 cut(s) 394, 855, 1205
SmiMI CAYNNNNRTG 3 cut(s) 158, 841, 1274
SmlI CTYRAG 1 cut(s) 629
SmoI CTYRAG 1 cut(s) 629
Sse9I AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
SseBI AGGCCT 1 cut(s) 919
SsiI CCGC 7 cut(s) 158, 277, 293, 662, 932, 935, 1013
SspMI CTAG 4 cut(s) 648, 696, 1110, 1333
StuI AGGCCT 1 cut(s) 919
StyD4I CCNGG 3 cut(s) 430, 785, 987
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 3 cut(s) 166, 755, 1067
TaiI ACGT 2 cut(s) 1278, 1332
TaqI TCGA 7 cut(s) 60, 137, 144, 342, 750, 822, 1095
TasI AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
TatI WGTACW 2 cut(s) 126, 732
TauI GCSGC 2 cut(s) 934, 937
TfiI GAWTC 1 cut(s) 520
TscAI CASTG 3 cut(s) 760, 1066, 1177
TseFI GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
TseI GCWGC 3 cut(s) 874, 883, 937
Tsp45I GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
TspDTI ATGAA 4 cut(s) 533, 684, 794, 1319
TspGWI ACGGA 2 cut(s) 128, 1271
TspRI CASTG 3 cut(s) 760, 1066, 1177
Tth111I GACNNNGTC 1 cut(s) 1147
VpaK11BI GGWCC 3 cut(s) 394, 855, 1205
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
XmaJI CCTAGG 1 cut(s) 647
XspI CTAG 4 cut(s) 648, 696, 1110, 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.