Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003048

Physical Location & Seq

Genomic Coordinates Reverse (-)

13518654 .. 13520712

Gene Structure 2059 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G147300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGCGGATATCAGTGGCAAAGCCTTTGAACTTTCGGTAAAGAAAGAAGAACCAACTTTGGTGCCTCCTGCAGAAGAAACAGAGAAGGGCCTGTACTACCTCTCAAACCTGGACCAGAACATTGCAGTCATCGTTCGTACCATCTACTGCTTCAAATCGGATTTAAAAGGGAATGAAGAAGCTGTGGAGATCATAAAGAGTGCCCTGTCAAAGGTTCTTGTTCACTACTACCCTTTGGCAGGGAGGTTAAATATCAGCACAGAGGGGAAGCTGATAGTGGATTGCACAGGAGATGGTGCTGTGTTTGTTGAAGCTGAAGCAAACTGTGAAATGGAAAAGATAGGTGACATAACAAAGCCTGATCCTTTGACTCTTGGGAAGCTGGTTCATGATATCCCTGGTGCGAAGAACATACTTGAGATTCCTCCCTTGGCTGCTCAGGTGACCAAGTTCAGATGTGGAGGATTTGTCCTTGGGCTATGTATCAACCACTGTATGTTTGATGGGATTGGGGCAATGGAATTTGTGAACTCATGGGGTGAGACTGCTAGAGGCTTGCCACTTAAGGTCCCCCCATTTCTAGACAGAAGCATACTTAAAGCCAGAAAACCACCTAAGATAGAGTTTCCACACAATGAATTTGCTGAGATTGAAGATATATCTGATAACACCAAACTCTATGAAGAAGAATTGCTATATAGGTCTTTCTTTTTTCACCCTGAGAACATTGAAAAGCTCAAGAAAATGGCCATGGAAGATGGGGTGCTTGACAAGTGCACTACATTTCAAGCACTCTCTGCCTTTGTCTGGAGAGCTAGAACTCAGGCCTTAAGAATGAGACCAGATCAGAAAACAAAGCTTCTTTTTGCTGTTGATGGGCGCTCAAGATTTGAGCCACCAATACCAGAAGGGTTCTTTGGGAATGCAATTTTGTTAACAAATTCACTGTGTAGTGCAGGGGAGCTATTGGAGAAGCCATTGTCATTTGCTGTTGGGCTAGTTGATAAGGCAGTTCACATGGTTACAGATAGTTATATGAGGTCTGCCATAGACTACTTTGAAGTAACAAGAGCTAGGCCTTCTTTGTCTGAAACTCTTTTGATCACAACTTGGTCTAAGCTAGCTTTCCACTCTACTGATTTTGGGTGGGGAGAGCCTGTGCTGTCAGGGCCAGTGGGTTTGCCTGAGAAGGAAGTAAGTTTGTTCCTTTCTCATGGGAAAAACAGGAAAAGCATAAATGTACTTTTGGGTCTGCCAGCTTCTGCTATGAAGACATTTGAAGAGTTGATGCAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009664 GO:0009698 GO:0009699 GO:0009712 GO:0009713 GO:0009801 GO:0009802 GO:0009803 GO:0009832 GO:0009987 GO:0010345 GO:0010383 GO:0010393 GO:0016043 GO:0016051 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0018958 GO:0019438 GO:0019748 GO:0019752 GO:0032787 GO:0033692 GO:0034637 GO:0034645 GO:0042537 GO:0042546 GO:0043170 GO:0043436 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044550 GO:0045229 GO:0045488 GO:0045489 GO:0046189 GO:0050734 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0090430 GO:0090431 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

Transferase

Protein Analysis

433

Amino Acids

48.03

Weight (kDa)

5.57

Isoelectric Point (pI)

37.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41040 AT5G41040
fragaria_vesca	FvH4_5g08760 FvH4_5g08760 FvH4_6g53880
malus_domestica	MD06G1137500.v1.1 MD09G1007600.v1.1 MD14G1152300.v1.1 MD17G1011500.v1.1
prunus_persica	Prupe.3G309400_v2.0.a1 Prupe.5G147300_v2.0.a1 Prupe.5G147300_v2.0.a1
pyrus_communis	pycom06g12870 pycom111g00590 pycom17g00620
rosa_chinensis	RchiOBHm_Chr2g0176041 RchiOBHm_Chr7g0189511
rosa_laevigata	RLG00000004605 RLG00000022375
rosa_multiflora	Rmu_co8455597.1_g000001 Rmu_sc0001924.1_g000008 Rmu_sc0033063.1_g000002
rosa_roxburghii	Rroxscaffold_2G00076830 Rroxscaffold_3G00265340
rosa_rugosa	Rorug02G0589800 Rorug02G0589900 Rorug06G0498500 Rorug06G0498500
rosa_samantha	Rh2AG668700 Rh2BG680300 Rh2CG643200 Rh2DG694000 Rh7AG103500 Rh7BG106000 Rh7CG108200 Rh7DG105600
rosa_wichuraiana	Rw2G054840 Rw7G008930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	61
AciI	CCGC	1 cut(s)	5
AclWI	GGATC	1 cut(s)	356
AcoI	YGGCCR	1 cut(s)	747
AcsI	RAATTY	3 cut(s)	521, 638, 940
AcuI	CTGAAG	1 cut(s)	336
AfaI	GTAC	3 cut(s)	95, 139, 1242
AfiI	CCNNNNNNNGG	3 cut(s)	211, 239, 807
AflII	CTTAAG	2 cut(s)	563, 829
AgsI	TTSAA	8 cut(s)	29, 154, 311, 653, 731, 788, 1061, 1280
AjnI	CCWGG	2 cut(s)	108, 397
AjuI	GAANNNNNNNTTGG	2 cut(s)	900, 932
Alw21I	GWGCWC	1 cut(s)	779
Alw26I	GTCTC	2 cut(s)	536, 832
Alw44I	GTGCAC	1 cut(s)	775
AlwI	GGATC	1 cut(s)	356
AlwNI	CAGNNNCTG	1 cut(s)	1262
AoxI	GGCC	5 cut(s)	88, 747, 825, 1076, 1169
ApaLI	GTGCAC	1 cut(s)	775
ApeKI	GCWGC	1 cut(s)	434
ApoI	RAATTY	3 cut(s)	521, 638, 940
AspLEI	GCGC	1 cut(s)	882
AspS9I	GGNCC	4 cut(s)	88, 112, 568, 1169
AsuHPI	GGTGA	4 cut(s)	356, 454, 551, 707
AsuNHI	GCTAGC	1 cut(s)	1120
AvaII	GGWCC	2 cut(s)	112, 568
BaeGI	GKGCMC	2 cut(s)	205, 779
BalI	TGGCCA	1 cut(s)	749
BanI	GGYRCC	1 cut(s)	61
BarI	GAAGNNNNNNTAC	2 cut(s)	77, 109
BbsI	GAAGAC	1 cut(s)	1277
Bbv12I	GWGCWC	1 cut(s)	779
BbvI	GCAGC	1 cut(s)	421
BccI	CCATC	5 cut(s)	149, 287, 497, 752, 869
BciT130I	CCWGG	2 cut(s)	110, 399
BclI	TGATCA	1 cut(s)	1101
BcoDI	GTCTC	2 cut(s)	536, 832
BfaI	CTAG	6 cut(s)	549, 581, 816, 998, 1074, 1121
BfmI	CTRYAG	1 cut(s)	69
BfoI	RGCGCY	1 cut(s)	883
BfrI	CTTAAG	2 cut(s)	563, 829
BisI	GCNGC	1 cut(s)	435
BlsI	GCNGC	1 cut(s)	436
Bme1390I	CCNGG	2 cut(s)	110, 399
Bme18I	GGWCC	2 cut(s)	112, 568
BmgT120I	GGNCC	4 cut(s)	88, 112, 568, 1169
BmiI	GGNNCC	2 cut(s)	63, 570
BmrFI	CCNGG	2 cut(s)	110, 399
BmsI	GCATC	1 cut(s)	1278
BmtI	GCTAGC	1 cut(s)	1124
BpiI	GAAGAC	1 cut(s)	1277
BpmI	CTGGAG	1 cut(s)	829
Bpu10I	CCTNAGC	1 cut(s)	438
BpuEI	CTTGAG	3 cut(s)	437, 722, 868
BsaI	GGTCTC	1 cut(s)	832
BsaJI	CCNNGG	4 cut(s)	397, 429, 472, 750
BsaXI	ACNNNNNCTCC	4 cut(s)	453, 483, 1143, 1173
Bsc4I	CCNNNNNNNGG	3 cut(s)	211, 239, 807
Bse1I	ACTGG	1 cut(s)	1172
Bse3DI	GCAATG	2 cut(s)	120, 522
BseBI	CCWGG	2 cut(s)	110, 399
BseDI	CCNNGG	4 cut(s)	397, 429, 472, 750
BseLI	CCNNNNNNNGG	3 cut(s)	211, 239, 807
BseMI	GCAATG	2 cut(s)	120, 522
BseMII	CTCAG	5 cut(s)	452, 636, 711, 836, 1176
BseNI	ACTGG	1 cut(s)	1172
BseSI	GKGCMC	2 cut(s)	205, 779
BseXI	GCAGC	1 cut(s)	421
BsgI	GTGCAG	1 cut(s)	975
BshFI	GGCC	5 cut(s)	90, 749, 827, 1078, 1171
BshNI	GGYRCC	1 cut(s)	61
BsiHKAI	GWGCWC	1 cut(s)	779
BslFI	GGGAC	1 cut(s)	554
BslI	CCNNNNNNNGG	3 cut(s)	211, 239, 807
BsmAI	GTCTC	2 cut(s)	536, 832
BsmFI	GGGAC	1 cut(s)	554
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	5 cut(s)	90, 749, 827, 1078, 1171
Bso31I	GGTCTC	1 cut(s)	832
Bsp1286I	GDGCHC	2 cut(s)	205, 779
Bsp143I	GATC	4 cut(s)	189, 361, 844, 1101
Bsp19I	CCATGG	1 cut(s)	750
BspACI	CCGC	1 cut(s)	5
BspANI	GGCC	5 cut(s)	90, 749, 827, 1078, 1171
BspCNI	CTCAG	5 cut(s)	451, 637, 712, 835, 1177
BspHI	TCATGA	1 cut(s)	388
BspLI	GGNNCC	2 cut(s)	63, 570
BspMAI	CTGCAG	1 cut(s)	73
BspOI	GCTAGC	1 cut(s)	1124
BspPI	GGATC	1 cut(s)	356
BspT107I	GGYRCC	1 cut(s)	61
BspTI	CTTAAG	2 cut(s)	563, 829
BspTNI	GGTCTC	1 cut(s)	832
BsrDI	GCAATG	2 cut(s)	120, 522
BsrI	ACTGG	1 cut(s)	1172
BssECI	CCNNGG	4 cut(s)	397, 429, 472, 750
BssMI	GATC	4 cut(s)	189, 361, 844, 1101
BssT1I	CCWWGG	3 cut(s)	429, 472, 750
Bst2UI	CCWGG	2 cut(s)	110, 399
Bst4CI	ACNGT	3 cut(s)	326, 494, 948
Bst6I	CTCTTC	1 cut(s)	1275
BstAFI	CTTAAG	2 cut(s)	563, 829
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstC8I	GCNNGC	3 cut(s)	557, 1122, 1257
BstDEI	CTNAG	7 cut(s)	438, 615, 645, 720, 822, 1116, 1185
BstDSI	CCRYGG	1 cut(s)	750
BstEII	GGTNACC	1 cut(s)	442
BstENI	CCTNNNNNAGG	2 cut(s)	209, 237
BstH2I	RGCGCY	1 cut(s)	883
BstHHI	GCGC	1 cut(s)	882
BstKTI	GATC	4 cut(s)	192, 364, 847, 1104
BstMAI	GTCTC	2 cut(s)	536, 832
BstMBI	GATC	4 cut(s)	189, 361, 844, 1101
BstMWI	GCNNNNNNNGC	2 cut(s)	797, 1168
BstNI	CCWGG	2 cut(s)	110, 399
BstPI	GGTNACC	1 cut(s)	442
BstSCI	CCNGG	2 cut(s)	108, 397
BstSFI	CTRYAG	1 cut(s)	69
BstSLI	GKGCMC	2 cut(s)	205, 779
BstV1I	GCAGC	1 cut(s)	421
BstV2I	GAAGAC	1 cut(s)	1277
BsuRI	GGCC	5 cut(s)	90, 749, 827, 1078, 1171
BtgI	CCRYGG	1 cut(s)	750
BtsIMutI	CAGTG	4 cut(s)	19, 490, 944, 1179
Cac8I	GCNNGC	3 cut(s)	557, 1122, 1257
CaiI	CAGNNNCTG	1 cut(s)	1262
CciI	TCATGA	1 cut(s)	388
CfoI	GCGC	1 cut(s)	882
Cfr13I	GGNCC	4 cut(s)	88, 112, 568, 1169
Csp6I	GTAC	3 cut(s)	94, 138, 1241
CviAII	CATG	5 cut(s)	389, 534, 751, 1018, 1214
CviQI	GTAC	3 cut(s)	94, 138, 1241
DdeI	CTNAG	7 cut(s)	438, 615, 645, 720, 822, 1116, 1185
DpnI	GATC	4 cut(s)	191, 363, 846, 1103
DpnII	GATC	4 cut(s)	189, 361, 844, 1101
DraI	TTTAAA	1 cut(s)	165
EaeI	YGGCCR	1 cut(s)	747
Eam1104I	CTCTTC	1 cut(s)	1275
EarI	CTCTTC	1 cut(s)	1275
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	429, 472, 750
Eco147I	AGGCCT	2 cut(s)	827, 1078
Eco31I	GGTCTC	1 cut(s)	832
Eco32I	GATATC	2 cut(s)	10, 394
Eco47I	GGWCC	2 cut(s)	112, 568
Eco57I	CTGAAG	1 cut(s)	336
Eco91I	GGTNACC	1 cut(s)	442
EcoNI	CCTNNNNNAGG	2 cut(s)	209, 237
EcoO109I	RGGNCCY	2 cut(s)	88, 568
EcoO65I	GGTNACC	1 cut(s)	442
EcoRII	CCWGG	2 cut(s)	108, 397
EcoRV	GATATC	2 cut(s)	10, 394
EcoT14I	CCWWGG	3 cut(s)	429, 472, 750
ErhI	CCWWGG	3 cut(s)	429, 472, 750
FaeI	CATG	5 cut(s)	392, 537, 754, 1021, 1217
FaqI	GGGAC	1 cut(s)	554
FatI	CATG	5 cut(s)	388, 533, 750, 1017, 1213
FbaI	TGATCA	1 cut(s)	1101
Fnu4HI	GCNGC	1 cut(s)	435
Fsp4HI	GCNGC	1 cut(s)	435
FspBI	CTAG	6 cut(s)	549, 581, 816, 998, 1074, 1121
GlaI	GCGC	1 cut(s)	881
GluI	GCNGC	1 cut(s)	435
GsuI	CTGGAG	1 cut(s)	829
HaeII	RGCGCY	1 cut(s)	883
HaeIII	GGCC	5 cut(s)	90, 749, 827, 1078, 1171
HhaI	GCGC	1 cut(s)	882
Hin1II	CATG	5 cut(s)	392, 537, 754, 1021, 1217
Hin6I	GCGC	1 cut(s)	880
HinP1I	GCGC	1 cut(s)	880
HincII	GTYRAC	1 cut(s)	936
HindII	GTYRAC	1 cut(s)	936
HindIII	AAGCTT	1 cut(s)	857
HinfI	GANTC	2 cut(s)	370, 421
HpaI	GTTAAC	1 cut(s)	936
HphI	GGTGA	4 cut(s)	356, 454, 551, 707
Hpy166II	GTNNAC	5 cut(s)	223, 529, 777, 936, 1015
Hpy188I	TCNGA	5 cut(s)	160, 455, 664, 849, 1090
Hpy188III	TCNNGA	5 cut(s)	389, 581, 739, 808, 885
Hpy8I	GTNNAC	5 cut(s)	223, 529, 777, 936, 1015
HpyAV	CCTTC	4 cut(s)	79, 902, 1089, 1183
HpyCH4III	ACNGT	3 cut(s)	326, 494, 948
HpyCH4V	TGCA	7 cut(s)	71, 125, 285, 777, 926, 956, 1291
HpyF10VI	GCNNNNNNNGC	2 cut(s)	797, 1168
HpyF3I	CTNAG	7 cut(s)	438, 615, 645, 720, 822, 1116, 1185
Hsp92II	CATG	5 cut(s)	392, 537, 754, 1021, 1217
HspAI	GCGC	1 cut(s)	880
Ksp22I	TGATCA	1 cut(s)	1101
KspAI	GTTAAC	1 cut(s)	936
Kzo9I	GATC	4 cut(s)	189, 361, 844, 1101
LmnI	GCTCC	1 cut(s)	961
Lsp1109I	GCAGC	1 cut(s)	421
LweI	GCATC	1 cut(s)	1278
MaeI	CTAG	6 cut(s)	549, 581, 816, 998, 1074, 1121
MaeIII	GTNAC	4 cut(s)	344, 442, 1021, 1063
MalI	GATC	4 cut(s)	191, 363, 846, 1103
MboI	GATC	4 cut(s)	189, 361, 844, 1101
MhlI	GDGCHC	2 cut(s)	205, 779
MlsI	TGGCCA	1 cut(s)	749
MluCI	AATT	5 cut(s)	521, 638, 689, 927, 940
MluNI	TGGCCA	1 cut(s)	749
MlyI	GAGTC	1 cut(s)	364
MnlI	CCTC	8 cut(s)	75, 110, 237, 256, 435, 455, 545, 1032
Mox20I	TGGCCA	1 cut(s)	749
MscI	TGGCCA	1 cut(s)	749
MseI	TTAA	7 cut(s)	164, 248, 564, 597, 830, 935, 1297
Msp20I	TGGCCA	1 cut(s)	749
MspCI	CTTAAG	2 cut(s)	563, 829
MspR9I	CCNGG	2 cut(s)	110, 399
Mva1269I	GAATGC	1 cut(s)	928
MvaI	CCWGG	2 cut(s)	110, 399
MwoI	GCNNNNNNNGC	2 cut(s)	797, 1168
NcoI	CCATGG	1 cut(s)	750
NdeII	GATC	4 cut(s)	189, 361, 844, 1101
NheI	GCTAGC	1 cut(s)	1120
NlaIII	CATG	5 cut(s)	392, 537, 754, 1021, 1217
NlaIV	GGNNCC	2 cut(s)	63, 570
NmuCI	GTSAC	2 cut(s)	344, 442
PagI	TCATGA	1 cut(s)	388
PceI	AGGCCT	2 cut(s)	827, 1078
PctI	GAATGC	1 cut(s)	928
PfeI	GAWTC	1 cut(s)	421
PkrI	GCNGC	1 cut(s)	436
PleI	GAGTC	1 cut(s)	364
PpsI	GAGTC	1 cut(s)	364
PpuMI	RGGWCCY	1 cut(s)	568
Psp5II	RGGWCCY	1 cut(s)	568
Psp6I	CCWGG	2 cut(s)	108, 397
PspEI	GGTNACC	1 cut(s)	442
PspGI	CCWGG	2 cut(s)	108, 397
PspN4I	GGNNCC	2 cut(s)	63, 570
PspPI	GGNCC	4 cut(s)	88, 112, 568, 1169
PspPPI	RGGWCCY	1 cut(s)	568
PstI	CTGCAG	1 cut(s)	73
PstNI	CAGNNNCTG	1 cut(s)	1262
RsaI	GTAC	3 cut(s)	95, 139, 1242
RsaNI	GTAC	3 cut(s)	94, 138, 1241
SaqAI	TTAA	7 cut(s)	164, 248, 564, 597, 830, 935, 1297
SatI	GCNGC	1 cut(s)	435
Sau3AI	GATC	4 cut(s)	189, 361, 844, 1101
Sau96I	GGNCC	4 cut(s)	88, 112, 568, 1169
SchI	GAGTC	1 cut(s)	364
ScrFI	CCNGG	2 cut(s)	110, 399
SduI	GDGCHC	2 cut(s)	205, 779
SfaNI	GCATC	1 cut(s)	1278
SfcI	CTRYAG	1 cut(s)	69
SinI	GGWCC	2 cut(s)	112, 568
SmlI	CTYRAG	5 cut(s)	416, 563, 737, 829, 883
SmoI	CTYRAG	5 cut(s)	416, 563, 737, 829, 883
Sse9I	AATT	5 cut(s)	521, 638, 689, 927, 940
SseBI	AGGCCT	2 cut(s)	827, 1078
SsiI	CCGC	1 cut(s)	5
SspMI	CTAG	6 cut(s)	549, 581, 816, 998, 1074, 1121
StuI	AGGCCT	2 cut(s)	827, 1078
StyD4I	CCNGG	2 cut(s)	108, 397
StyI	CCWWGG	3 cut(s)	429, 472, 750
TaaI	ACNGT	3 cut(s)	326, 494, 948
TasI	AATT	5 cut(s)	521, 638, 689, 927, 940
TatI	WGTACW	2 cut(s)	93, 1240
TfiI	GAWTC	1 cut(s)	421
Tru1I	TTAA	7 cut(s)	164, 248, 564, 597, 830, 935, 1297
Tru9I	TTAA	7 cut(s)	164, 248, 564, 597, 830, 935, 1297
TscAI	CASTG	4 cut(s)	19, 497, 951, 1179
TseFI	GTSAC	2 cut(s)	344, 442
TseI	GCWGC	1 cut(s)	434
Tsp45I	GTSAC	2 cut(s)	344, 442
TspDTI	ATGAA	5 cut(s)	189, 377, 651, 696, 1283
TspRI	CASTG	4 cut(s)	19, 497, 951, 1179
Vha464I	CTTAAG	2 cut(s)	563, 829
VneI	GTGCAC	1 cut(s)	775
VpaK11BI	GGWCC	2 cut(s)	112, 568
XagI	CCTNNNNNAGG	2 cut(s)	209, 237
XapI	RAATTY	3 cut(s)	521, 638, 940
XbaI	TCTAGA	1 cut(s)	580
XspI	CTAG	6 cut(s)	549, 581, 816, 998, 1074, 1121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.