MD14G1152300.v1.1

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
24646184 .. 24647878
1695 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1152300.v1.1.491

Sequence Viewer

Length: 1299 bp
ATGGGGGATATCAGTGACCAAGTCTTTGAGCTTATTGTAAAGAAAGAAGAACCAACTTTGGTGCCTCCTGAATCCGAAACGGAGAAGGGTCTGTACTACCTGTCGAACCTGGACCAGAACATTGCGGTCATAGTCCGAACCATGTACTGCTTCAAATCGGATTCAAAAGGGAACTACGAAGCCGCTAAAGTCATAAAGAGTGCACTGTCAAAAATTCTTGTTCACTACTACCCTTTTGCAGGAAAGTTAACTATCAGCACAGAAGGGAAGCTGATTGTGGATTGCACAGGAGATGGTGCTGTGTTTGTGGAAGCTGAAGCCAACTGTGAAATGGAAAAGATAGGTGACACAACAAAGCCTGATCCTAAAACTCTTGGAAATCTGGTTCATGATATTCCTGGCGCCAACATACTTGAGATTCCTCTCTTGACAGTACAGGTGACTAAGTTCACATGCGGAGAGTTTGCTCTGGGGCTATGCATCAACCATTGTACGTCGGATGGGATTGCTGTAATGGAATTTATCAACTCGTGGAGTGATACGGCAAGAGGCTTGCCGCTCAAGGTTCTGCCATTTCTCGACAGAAACATACTCAAACCGAGTAACCCACCAAAGATAGAGTTTCCTCACGACGAATTCATTCAGATCGAAGACATATCCGAAAACTCCAAGCTCTATGAAGAAGAACTGCTATACAGCGCCTTCTGTTTCGACCCCAAGAAGCTTGAAAAGCTCAAGAAAATGGCCATGGAAGATGGGGTTCTTGAGAAGTGCACAACATTTAAAGCACTCTCTGCCTTTGTCTGGAGAGCTAGAACTGAGGCCTTGAGAATGAGGCCGGATAAAAAAACGAAGCTCCTTTTCGCCGTTGATGGGCGCTCAAAACTTGAGCCGCCAGTACCAGAAGGGTTCTTCGGGAATGCAATTTTGTTGACACATGCACTGTGCACTGCTGGGGAGCTAATGGAGAATCCAATTTCGTTCGCGGTTGGATTAGTTGAAAAGGCGGTTAAAATGGTGACGGACGGTTATATGAGGTCGGTGGTCGACTACTTTGAAGTGACAAGAGCTAGGCCTTCTTTGGCAGCAACCCTTTTGATAACAACTTGGTCCAAGCTAAGTTTCCACACAACTGACTTTGGCTGGGGAGAGCCTGTGTTTTCAGGGCCAGTGGGTTTGCCTGAGAAGGAAGTTTGTTTGTTTCTATCTCATGGAGAAGATAGGAAAAGCATAAATGTGCTTTTGGGCTTGCCAGCTTCTGCTATGAAGATATTTGAAGATTTGATGAGGCAGATTTAA

Protein Analysis

433

Amino Acids

48.04

Weight (kDa)

5.27

Isoelectric Point (pI)

33.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 13 - 429 1.1e-91 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 61, 401
AccBSI CCGCTC 1 cut(s) 559
AccI GTMKAC 1 cut(s) 1047
AccII CGCG 1 cut(s) 986
AciI CCGC 7 cut(s) 125, 183, 456, 557, 893, 986, 1007
AclWI GGATC 1 cut(s) 356
AcoI YGGCCR 1 cut(s) 744
AcsI RAATTY 3 cut(s) 213, 518, 635
AcuI CTGAAG 1 cut(s) 336
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 5 cut(s) 95, 146, 435, 493, 900
AfiI CCNNNNNNNGG 3 cut(s) 239, 804, 873
AgsI TTSAA 6 cut(s) 154, 165, 728, 1001, 1058, 1277
AjnI CCWGG 2 cut(s) 108, 397
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
AloI GAACNNNNNNTCC 2 cut(s) 369, 401
Alw21I GWGCWC 3 cut(s) 205, 776, 950
Alw44I GTGCAC 3 cut(s) 201, 772, 946
AlwI GGATC 1 cut(s) 356
AlwNI CAGNNNCTG 1 cut(s) 1259
AoxI GGCC 5 cut(s) 744, 822, 836, 1073, 1166
ApaLI GTGCAC 3 cut(s) 201, 772, 946
ApeKI GCWGC 1 cut(s) 1085
ApoI RAATTY 3 cut(s) 213, 518, 635
ArsI GACNNNNNNTTYG 2 cut(s) 8, 40
Asp700I GAANNNNTTC 1 cut(s) 639
AspLEI GCGC 3 cut(s) 404, 701, 879
AspS9I GGNCC 3 cut(s) 112, 1110, 1166
AsuHPI GGTGA 3 cut(s) 356, 451, 1030
AvaII GGWCC 2 cut(s) 112, 1110
BaeGI GKGCMC 3 cut(s) 205, 776, 950
BalI TGGCCA 1 cut(s) 746
BanI GGYRCC 2 cut(s) 61, 401
BarI GAAGNNNNNNTAC 2 cut(s) 77, 109
BauI CACGAG 1 cut(s) 529
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 3 cut(s) 205, 776, 950
BbvI GCAGC 1 cut(s) 1097
BccI CCATC 4 cut(s) 287, 494, 749, 866
BceAI ACGGC 2 cut(s) 558, 851
BciT130I CCWGG 2 cut(s) 110, 399
BfaI CTAG 2 cut(s) 813, 1071
BfoI RGCGCY 3 cut(s) 405, 702, 880
BisI GCNGC 4 cut(s) 183, 557, 893, 1086
BlsI GCNGC 4 cut(s) 184, 558, 894, 1087
Bme1390I CCNGG 2 cut(s) 110, 399
Bme18I GGWCC 2 cut(s) 112, 1110
BmgT120I GGNCC 3 cut(s) 112, 1110, 1166
BmiI GGNNCC 2 cut(s) 63, 403
BmrFI CCNGG 2 cut(s) 110, 399
BmsI GCATC 1 cut(s) 489
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 1 cut(s) 826
BpuEI CTTGAG 6 cut(s) 434, 545, 719, 785, 847, 908
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 1 cut(s) 747
BsaXI ACNNNNNCTCC 2 cut(s) 1140, 1170
Bsc4I CCNNNNNNNGG 3 cut(s) 239, 804, 873
Bse1I ACTGG 2 cut(s) 896, 1169
Bse3DI GCAATG 1 cut(s) 120
BseBI CCWGG 2 cut(s) 110, 399
BseDI CCNNGG 1 cut(s) 747
BseGI GGATG 1 cut(s) 505
BseLI CCNNNNNNNGG 3 cut(s) 239, 804, 873
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 2 cut(s) 810, 1173
BseNI ACTGG 2 cut(s) 896, 1169
BseSI GKGCMC 3 cut(s) 205, 776, 950
BseXI GCAGC 1 cut(s) 1097
BseYI CCCAGC 2 cut(s) 953, 1143
Bsh1236I CGCG 1 cut(s) 986
BshFI GGCC 5 cut(s) 746, 824, 838, 1075, 1168
BshNI GGYRCC 2 cut(s) 61, 401
BsiHKAI GWGCWC 3 cut(s) 205, 776, 950
BsiSI CCGG 1 cut(s) 839
BslI CCNNNNNNNGG 3 cut(s) 239, 804, 873
BsmI GAATGC 1 cut(s) 925
BsnI GGCC 5 cut(s) 746, 824, 838, 1075, 1168
Bsp1286I GDGCHC 3 cut(s) 205, 776, 950
Bsp143I GATC 2 cut(s) 361, 645
Bsp19I CCATGG 1 cut(s) 747
BspACI CCGC 7 cut(s) 125, 183, 456, 557, 893, 986, 1007
BspANI GGCC 5 cut(s) 746, 824, 838, 1075, 1168
BspCNI CTCAG 2 cut(s) 811, 1174
BspFNI CGCG 1 cut(s) 986
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 2 cut(s) 63, 403
BspPI GGATC 1 cut(s) 356
BspT107I GGYRCC 2 cut(s) 61, 401
BsrBI CCGCTC 1 cut(s) 559
BsrDI GCAATG 1 cut(s) 120
BsrI ACTGG 2 cut(s) 896, 1169
BssECI CCNNGG 1 cut(s) 747
BssMI GATC 2 cut(s) 361, 645
BssNI GRCGYC 1 cut(s) 402
BssSI CACGAG 1 cut(s) 529
BssT1I CCWWGG 1 cut(s) 747
Bst2BI CACGAG 1 cut(s) 529
Bst2UI CCWGG 2 cut(s) 110, 399
Bst4CI ACNGT 5 cut(s) 207, 326, 433, 945, 1028
BstACI GRCGYC 1 cut(s) 402
BstAPI GCANNNNNTGC 1 cut(s) 794
BstC8I GCNNGC 3 cut(s) 554, 1250, 1254
BstDEI CTNAG 4 cut(s) 444, 819, 1118, 1182
BstDSI CCRYGG 1 cut(s) 747
BstENI CCTNNNNNAGG 1 cut(s) 237
BstF5I GGATG 1 cut(s) 505
BstFNI CGCG 1 cut(s) 986
BstH2I RGCGCY 3 cut(s) 405, 702, 880
BstHHI GCGC 3 cut(s) 404, 701, 879
BstKTI GATC 2 cut(s) 364, 648
BstMBI GATC 2 cut(s) 361, 645
BstMWI GCNNNNNNNGC 2 cut(s) 730, 794
BstNI CCWGG 2 cut(s) 110, 399
BstNSI RCATGY 2 cut(s) 456, 941
BstSCI CCNGG 2 cut(s) 108, 397
BstSLI GKGCMC 3 cut(s) 205, 776, 950
BstUI CGCG 1 cut(s) 986
BstV1I GCAGC 1 cut(s) 1097
BstV2I GAAGAC 1 cut(s) 657
BsuRI GGCC 5 cut(s) 746, 824, 838, 1075, 1168
BtgI CCRYGG 1 cut(s) 747
BtsCI GGATG 1 cut(s) 505
BtsI GCAGTG 1 cut(s) 948
BtsIMutI CAGTG 5 cut(s) 19, 203, 941, 948, 1176
Cac8I GCNNGC 3 cut(s) 554, 1250, 1254
CaiI CAGNNNCTG 1 cut(s) 1259
CciI TCATGA 1 cut(s) 388
CfoI GCGC 3 cut(s) 404, 701, 879
Cfr13I GGNCC 3 cut(s) 112, 1110, 1166
Csp6I GTAC 5 cut(s) 94, 145, 434, 492, 899
CviAII CATG 6 cut(s) 142, 389, 453, 748, 938, 1211
CviQI GTAC 5 cut(s) 94, 145, 434, 492, 899
DdeI CTNAG 4 cut(s) 444, 819, 1118, 1182
DinI GGCGCC 1 cut(s) 403
DpnI GATC 2 cut(s) 363, 647
DpnII GATC 2 cut(s) 361, 645
DraI TTTAAA 1 cut(s) 784
EaeI YGGCCR 1 cut(s) 744
Eco130I CCWWGG 1 cut(s) 747
Eco147I AGGCCT 2 cut(s) 824, 1075
Eco32I GATATC 1 cut(s) 10
Eco47I GGWCC 2 cut(s) 112, 1110
Eco57I CTGAAG 1 cut(s) 336
EcoNI CCTNNNNNAGG 1 cut(s) 237
EcoRI GAATTC 1 cut(s) 635
EcoRII CCWGG 2 cut(s) 108, 397
EcoRV GATATC 1 cut(s) 10
EcoT14I CCWWGG 1 cut(s) 747
EcoT22I ATGCAT 1 cut(s) 482
EgeI GGCGCC 1 cut(s) 403
EheI GGCGCC 1 cut(s) 403
ErhI CCWWGG 1 cut(s) 747
FaeI CATG 6 cut(s) 145, 392, 456, 751, 941, 1214
FatI CATG 6 cut(s) 141, 388, 452, 747, 937, 1210
FblI GTMKAC 1 cut(s) 1047
Fnu4HI GCNGC 4 cut(s) 183, 557, 893, 1086
FokI GGATG 1 cut(s) 512
Fsp4HI GCNGC 4 cut(s) 183, 557, 893, 1086
FspBI CTAG 2 cut(s) 813, 1071
GlaI GCGC 3 cut(s) 403, 700, 878
GluI GCNGC 4 cut(s) 183, 557, 893, 1086
GsaI CCCAGC 2 cut(s) 957, 1147
GsuI CTGGAG 1 cut(s) 826
HaeII RGCGCY 3 cut(s) 405, 702, 880
HaeIII GGCC 5 cut(s) 746, 824, 838, 1075, 1168
HapII CCGG 1 cut(s) 839
HhaI GCGC 3 cut(s) 404, 701, 879
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 6 cut(s) 145, 392, 456, 751, 941, 1214
Hin6I GCGC 3 cut(s) 402, 699, 877
HinP1I GCGC 3 cut(s) 402, 699, 877
HincII GTYRAC 3 cut(s) 249, 933, 1048
HindII GTYRAC 3 cut(s) 249, 933, 1048
HindIII AAGCTT 1 cut(s) 722
HinfI GANTC 4 cut(s) 71, 161, 418, 970
HpaI GTTAAC 1 cut(s) 249
HpaII CCGG 1 cut(s) 839
HphI GGTGA 3 cut(s) 356, 451, 1030
Hpy166II GTNNAC 8 cut(s) 203, 223, 249, 450, 774, 933, 948, 1048
Hpy188I TCNGA 6 cut(s) 76, 137, 160, 499, 645, 661
Hpy188III TCNNGA 9 cut(s) 68, 389, 427, 578, 629, 736, 764, 805, 916
Hpy8I GTNNAC 8 cut(s) 203, 223, 249, 450, 774, 933, 948, 1048
Hpy99I CGWCG 2 cut(s) 499, 635
HpyAV CCTTC 6 cut(s) 79, 257, 712, 899, 1086, 1180
HpyCH4III ACNGT 5 cut(s) 207, 326, 433, 945, 1028
HpyCH4IV ACGT 1 cut(s) 494
HpyCH4V TGCA 8 cut(s) 203, 239, 285, 480, 774, 923, 941, 948
HpyF10VI GCNNNNNNNGC 2 cut(s) 730, 794
HpyF3I CTNAG 4 cut(s) 444, 819, 1118, 1182
HpySE526I ACGT 1 cut(s) 494
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 6 cut(s) 145, 392, 456, 751, 941, 1214
HspAI GCGC 3 cut(s) 402, 699, 877
KasI GGCGCC 1 cut(s) 401
KspAI GTTAAC 1 cut(s) 249
Kzo9I GATC 2 cut(s) 361, 645
LmnI GCTCC 2 cut(s) 861, 958
Lsp1109I GCAGC 1 cut(s) 1097
LweI GCATC 1 cut(s) 489
MaeI CTAG 2 cut(s) 813, 1071
MaeII ACGT 1 cut(s) 494
MaeIII GTNAC 6 cut(s) 14, 344, 439, 602, 1018, 1060
MalI GATC 2 cut(s) 363, 647
MbiI CCGCTC 1 cut(s) 559
MboI GATC 2 cut(s) 361, 645
MboII GAAGA 9 cut(s) 59, 662, 692, 695, 764, 904, 1229, 1279, 1289
MhlI GDGCHC 3 cut(s) 205, 776, 950
MlsI TGGCCA 1 cut(s) 746
MluCI AATT 5 cut(s) 213, 518, 635, 924, 975
MluNI TGGCCA 1 cut(s) 746
Mly113I GGCGCC 1 cut(s) 402
MmeI TCCRAC 2 cut(s) 477, 970
MnlI CCTC 8 cut(s) 75, 432, 542, 636, 814, 828, 1029, 1281
Mox20I TGGCCA 1 cut(s) 746
Mph1103I ATGCAT 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 639
MscI TGGCCA 1 cut(s) 746
MseI TTAA 4 cut(s) 248, 783, 1011, 1297
MslI CAYNNNNRTG 1 cut(s) 1235
Msp20I TGGCCA 1 cut(s) 746
MspI CCGG 1 cut(s) 839
MspR9I CCNGG 2 cut(s) 110, 399
Mva1269I GAATGC 1 cut(s) 925
MvaI CCWGG 2 cut(s) 110, 399
MvnI CGCG 1 cut(s) 986
MwoI GCNNNNNNNGC 2 cut(s) 730, 794
NarI GGCGCC 1 cut(s) 402
NcoI CCATGG 1 cut(s) 747
NdeII GATC 2 cut(s) 361, 645
NlaIII CATG 6 cut(s) 145, 392, 456, 751, 941, 1214
NlaIV GGNNCC 2 cut(s) 63, 403
NmuCI GTSAC 5 cut(s) 14, 344, 439, 1018, 1060
NsiI ATGCAT 1 cut(s) 482
NspI RCATGY 2 cut(s) 456, 941
PagI TCATGA 1 cut(s) 388
PceI AGGCCT 2 cut(s) 824, 1075
PctI GAATGC 1 cut(s) 925
PdmI GAANNNNTTC 1 cut(s) 639
PfeI GAWTC 4 cut(s) 71, 161, 418, 970
PflFI GACNNNGTC 1 cut(s) 20
PkrI GCNGC 4 cut(s) 184, 558, 894, 1087
PluTI GGCGCC 1 cut(s) 405
Psp6I CCWGG 2 cut(s) 108, 397
PspFI CCCAGC 2 cut(s) 953, 1143
PspGI CCWGG 2 cut(s) 108, 397
PspN4I GGNNCC 2 cut(s) 63, 403
PspPI GGNCC 3 cut(s) 112, 1110, 1166
PstNI CAGNNNCTG 1 cut(s) 1259
PsyI GACNNNGTC 1 cut(s) 20
RsaI GTAC 5 cut(s) 95, 146, 435, 493, 900
RsaNI GTAC 5 cut(s) 94, 145, 434, 492, 899
RseI CAYNNNNRTG 1 cut(s) 1235
SalI GTCGAC 1 cut(s) 1046
SaqAI TTAA 4 cut(s) 248, 783, 1011, 1297
SatI GCNGC 4 cut(s) 183, 557, 893, 1086
Sau3AI GATC 2 cut(s) 361, 645
Sau96I GGNCC 3 cut(s) 112, 1110, 1166
ScrFI CCNGG 2 cut(s) 110, 399
SduI GDGCHC 3 cut(s) 205, 776, 950
SfaNI GCATC 1 cut(s) 489
SfoI GGCGCC 1 cut(s) 403
SinI GGWCC 2 cut(s) 112, 1110
SmiMI CAYNNNNRTG 1 cut(s) 1235
SmlI CTYRAG 6 cut(s) 413, 560, 734, 764, 826, 887
SmoI CTYRAG 6 cut(s) 413, 560, 734, 764, 826, 887
Sse9I AATT 5 cut(s) 213, 518, 635, 924, 975
SseBI AGGCCT 2 cut(s) 824, 1075
SsiI CCGC 7 cut(s) 125, 183, 456, 557, 893, 986, 1007
SspDI GGCGCC 1 cut(s) 401
SspMI CTAG 2 cut(s) 813, 1071
StuI AGGCCT 2 cut(s) 824, 1075
StyD4I CCNGG 2 cut(s) 108, 397
StyI CCWWGG 1 cut(s) 747
TaaI ACNGT 5 cut(s) 207, 326, 433, 945, 1028
TaiI ACGT 1 cut(s) 497
TaqI TCGA 5 cut(s) 104, 579, 648, 711, 1047
TasI AATT 5 cut(s) 213, 518, 635, 924, 975
TatI WGTACW 3 cut(s) 93, 144, 433
TauI GCSGC 3 cut(s) 185, 559, 895
TfiI GAWTC 4 cut(s) 71, 161, 418, 970
Tru1I TTAA 4 cut(s) 248, 783, 1011, 1297
Tru9I TTAA 4 cut(s) 248, 783, 1011, 1297
TscAI CASTG 5 cut(s) 19, 210, 948, 955, 1176
TseFI GTSAC 5 cut(s) 14, 344, 439, 1018, 1060
TseI GCWGC 1 cut(s) 1085
Tsp45I GTSAC 5 cut(s) 14, 344, 439, 1018, 1060
TspDTI ATGAA 4 cut(s) 377, 628, 693, 1280
TspGWI ACGGA 2 cut(s) 95, 1037
TspRI CASTG 5 cut(s) 19, 210, 948, 955, 1176
Tth111I GACNNNGTC 1 cut(s) 20
VneI GTGCAC 3 cut(s) 201, 772, 946
VpaK11BI GGWCC 2 cut(s) 112, 1110
XagI CCTNNNNNAGG 1 cut(s) 237
XapI RAATTY 3 cut(s) 213, 518, 635
XceI RCATGY 2 cut(s) 456, 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 328
XmiI GTMKAC 1 cut(s) 1047
XmnI GAANNNNTTC 1 cut(s) 639
XspI CTAG 2 cut(s) 813, 1071
Zsp2I ATGCAT 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.