MD09G1007600.v1.1

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
539012 .. 541142
2131 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1007600.v1.1.491

Sequence Viewer

Length: 1338 bp
ATGGTTGCTGAATTCGGAGACTCTGCCGCAATGGACAGCAACAACACCAATGGCGACGCGTTCCAGCTGAGAGTGAAGCAAGGAGAGCCAACTCTGGTTCCCCCTGCGGTTGAAACTGAGAAGGGTTTGTACTTCCTCTCGAACCTCGATCAGAACATTGCGGTGACTGTTCGTACTATTTACTGCTTCAAGTCGGATGCAAAGGGAAATGATAAGGCAGGGGAAGTGATCAAGGATGCTTTGAAGAAGGTTCTTGTCCACTACTACCCTCTCGCCGGACGATTAGCAATCAGCGCGGAGGGAAAGCTCATTGTGGATTGCACCGGGGAAGGAGCTGTTTTCGTTGAGGCTGAAGCAGATTGCGCGATAGAAGAGATTGGAGACATAACAAAGCCGGACCCCGAGACTCTTGGGAAGCTGGTTTATGATGTTCCTGGTGCAAAGAACATGCTGGAGATTCCTCCTCTGGTGGCTCAGGTGACTAAATTCAAATGTGGAGGATTTGCTCTTGGCCTGTGCATGAATCATTGTATGTTTGATGGCATTGGCGCTATGGAATTCGTGAACTCGTGGGCTAAAATCGCCAGAGGTTTACAATTGACAGATCCTCCGTTTTTAGACAGAAGCATACTCAAAGCGCGAAACCCACCTAAGATAGAGTACCTGCATCAAGAATTCTCAGAGATTACTGGCACTTCTAGCACCAACAATGACCTTTGTGATGAAAAAATGTTGTACAGATCCTTCTGTTTCAACAGTGAGAAGCTTGAAAAACTCAAAACGAAGGCCAGGGAAGACGGGGCGCTTGAAAATTGCACTACATTCGAAGCCCTCTCTGCATTTGTGTGGAAAGCTCGGACCAGAGCGCTAAATATGCTGCCTGAACAACAAATAAAGCTCATGTTTGCTGTTGACGGGAGGCCTAAATTCAGCCCGCCGCTGCCAAAATGGTACTTTGGCAACGGCATTGTGCTGACAAATTCCATCTGCCAGGCAGGTGACTTGCTGGACAAGCCACTGTCAAATGCAGTCGGACTAGTTCAAGATGCAATCAAGATGGTCACTGACAGTTACATGAGATCTGCCATAGATTATTTCGAGCTGACGCGAGCCAGGCCTTCGTTGGCCTCCACACTCTTGATCACGACTTGGTCTAGGCTGTCGTTCTACACGACTGATTTTGGTTGGGGAGAGCCTGTGCTGTCGGGCCCGGTGGCATTGCCGGAGAAGGAAGTGATCTTGTTCCTTTCTAATGGAACAGAAAAGAAGAACATAAACGTGCTTCTGGGGCTTCCAGCTTCTGCCATGAATGTCTTTGAAGAACTGATGAATGTCTAG

Protein Analysis

446

Amino Acids

48.96

Weight (kDa)

5.12

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 29 - 443 3.3e-95 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 986
Acc36I ACCTGC 2 cut(s) 672, 986
AccII CGCG 5 cut(s) 59, 296, 365, 640, 1108
AciI CCGC 6 cut(s) 27, 107, 161, 296, 935, 938
AclWI GGATC 2 cut(s) 599, 735
AcsI RAATTY 6 cut(s) 11, 485, 557, 674, 926, 979
AcuI CTGAAG 1 cut(s) 372
AfaI GTAC 5 cut(s) 131, 175, 662, 737, 953
AfeI AGCGCT 1 cut(s) 867
AfiI CCNNNNNNNGG 1 cut(s) 275
AflIII ACRYGT 1 cut(s) 57
AgsI TTSAA 9 cut(s) 113, 190, 244, 490, 754, 770, 809, 1043, 1319
AhlI ACTAGT 1 cut(s) 1036
AjnI CCWGG 4 cut(s) 433, 788, 990, 1112
AluBI AGCT 9 cut(s) 67, 307, 335, 418, 766, 854, 898, 1102, 1298
AluI AGCT 9 cut(s) 67, 307, 335, 418, 766, 854, 898, 1102, 1298
Alw26I GTCTC 3 cut(s) 12, 375, 398
AlwI GGATC 2 cut(s) 599, 735
AlwNI CAGNNNCTG 1 cut(s) 1301
Ama87I CYCGRG 1 cut(s) 401
Aor51HI AGCGCT 1 cut(s) 867
AoxI GGCC 6 cut(s) 511, 786, 920, 1115, 1125, 1207
ApaI GGGCCC 1 cut(s) 1211
ApeKI GCWGC 2 cut(s) 877, 940
ApoI RAATTY 6 cut(s) 11, 485, 557, 674, 926, 979
AspLEI GCGC 6 cut(s) 296, 365, 551, 640, 805, 868
AspS9I GGNCC 4 cut(s) 397, 858, 1207, 1208
AsuC2I CCSGG 2 cut(s) 325, 1211
AsuHPI GGTGA 3 cut(s) 175, 490, 1010
AsuII TTCGAA 1 cut(s) 825
AvaI CYCGRG 1 cut(s) 401
AvaII GGWCC 2 cut(s) 397, 858
BaeGI GKGCMC 1 cut(s) 1211
BanII GRGCYC 1 cut(s) 1211
BarI GAAGNNNNNNTAC 4 cut(s) 113, 145, 728, 760
BauI CACGAG 1 cut(s) 568
BbsI GAAGAC 1 cut(s) 801
BbvI GCAGC 2 cut(s) 864, 927
BccI CCATC 3 cut(s) 533, 992, 1051
BceAI ACGGC 1 cut(s) 979
BcgI CGANNNNNNTGC 2 cut(s) 805, 839
BciT130I CCWGG 4 cut(s) 435, 790, 992, 1114
BclI TGATCA 2 cut(s) 228, 1140
BcnI CCSGG 2 cut(s) 325, 1211
BcoDI GTCTC 3 cut(s) 12, 375, 398
BcuI ACTAGT 1 cut(s) 1036
BfaI CTAG 4 cut(s) 699, 1037, 1155, 1336
BfoI RGCGCY 3 cut(s) 552, 806, 869
BfuAI ACCTGC 2 cut(s) 672, 986
BglII AGATCT 1 cut(s) 1079
BisI GCNGC 4 cut(s) 27, 878, 938, 941
BlsI GCNGC 4 cut(s) 28, 879, 939, 942
Bme1390I CCNGG 6 cut(s) 325, 435, 790, 992, 1114, 1211
Bme18I GGWCC 2 cut(s) 397, 858
BmeT110I CYCGRG 1 cut(s) 401
BmgT120I GGNCC 4 cut(s) 397, 858, 1207, 1208
BmiI GGNNCC 3 cut(s) 99, 399, 1209
BmrFI CCNGG 6 cut(s) 325, 435, 790, 992, 1114, 1211
BmsI GCATC 4 cut(s) 187, 226, 676, 1036
BpiI GAAGAC 1 cut(s) 801
BpmI CTGGAG 1 cut(s) 473
Bpu10I CCTNAGC 1 cut(s) 474
Bpu14I TTCGAA 1 cut(s) 825
BpuMI CCSGG 2 cut(s) 325, 1211
BsaJI CCNNGG 2 cut(s) 324, 789
BsaXI ACNNNNNCTCC 4 cut(s) 592, 622, 1182, 1212
Bsc4I CCNNNNNNNGG 1 cut(s) 275
Bse1I ACTGG 1 cut(s) 694
Bse3DI GCAATG 3 cut(s) 36, 156, 1217
BseBI CCWGG 4 cut(s) 435, 790, 992, 1114
BseDI CCNNGG 2 cut(s) 324, 789
BseGI GGATG 2 cut(s) 202, 241
BseLI CCNNNNNNNGG 1 cut(s) 275
BseMI GCAATG 3 cut(s) 36, 156, 1217
BseMII CTCAG 4 cut(s) 59, 108, 488, 693
BseNI ACTGG 1 cut(s) 694
BseRI GAGGAG 1 cut(s) 453
BseSI GKGCMC 1 cut(s) 1211
BseXI GCAGC 2 cut(s) 864, 927
Bsh1236I CGCG 5 cut(s) 59, 296, 365, 640, 1108
BshFI GGCC 6 cut(s) 513, 788, 922, 1117, 1127, 1209
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 5 cut(s) 276, 324, 395, 1211, 1223
BslI CCNNNNNNNGG 1 cut(s) 275
BsmAI GTCTC 3 cut(s) 12, 375, 398
BsnI GGCC 6 cut(s) 513, 788, 922, 1117, 1127, 1209
BsoBI CYCGRG 1 cut(s) 401
Bsp119I TTCGAA 1 cut(s) 825
Bsp120I GGGCCC 1 cut(s) 1207
Bsp1286I GDGCHC 1 cut(s) 1211
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
BspACI CCGC 6 cut(s) 27, 107, 161, 296, 935, 938
BspANI GGCC 6 cut(s) 513, 788, 922, 1117, 1127, 1209
BspCNI CTCAG 4 cut(s) 60, 109, 487, 692
BspFNI CGCG 5 cut(s) 59, 296, 365, 640, 1108
BspLI GGNNCC 3 cut(s) 99, 399, 1209
BspMI ACCTGC 2 cut(s) 672, 986
BspPI GGATC 2 cut(s) 599, 735
BspT104I TTCGAA 1 cut(s) 825
BsrDI GCAATG 3 cut(s) 36, 156, 1217
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 1 cut(s) 694
BssECI CCNNGG 2 cut(s) 324, 789
BssMI GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
BssSI CACGAG 1 cut(s) 568
Bst2BI CACGAG 1 cut(s) 568
Bst2UI CCWGG 4 cut(s) 435, 790, 992, 1114
Bst4CI ACNGT 4 cut(s) 169, 758, 1020, 1070
Bst6I CTCTTC 1 cut(s) 366
BstAUI TGTACA 1 cut(s) 735
BstBI TTCGAA 1 cut(s) 825
BstC8I GCNNGC 2 cut(s) 935, 1110
BstDEI CTNAG 5 cut(s) 68, 117, 474, 651, 679
BstF5I GGATG 2 cut(s) 202, 241
BstFNI CGCG 5 cut(s) 59, 296, 365, 640, 1108
BstH2I RGCGCY 3 cut(s) 552, 806, 869
BstHHI GCGC 6 cut(s) 296, 365, 551, 640, 805, 868
BstKTI GATC 7 cut(s) 151, 231, 607, 743, 1082, 1143, 1239
BstMAI GTCTC 3 cut(s) 12, 375, 398
BstMBI GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
BstNI CCWGG 4 cut(s) 435, 790, 992, 1114
BstNSI RCATGY 1 cut(s) 451
BstSCI CCNGG 6 cut(s) 323, 433, 788, 990, 1112, 1209
BstSLI GKGCMC 1 cut(s) 1211
BstUI CGCG 5 cut(s) 59, 296, 365, 640, 1108
BstV1I GCAGC 2 cut(s) 864, 927
BstV2I GAAGAC 1 cut(s) 801
BstX2I RGATCY 3 cut(s) 604, 740, 1079
BstYI RGATCY 3 cut(s) 604, 740, 1079
BsuRI GGCC 6 cut(s) 513, 788, 922, 1117, 1127, 1209
BtsCI GGATG 2 cut(s) 202, 241
BtsIMutI CAGTG 3 cut(s) 763, 1016, 1062
BveI ACCTGC 2 cut(s) 672, 986
Cac8I GCNNGC 2 cut(s) 935, 1110
CaiI CAGNNNCTG 1 cut(s) 1301
CfoI GCGC 6 cut(s) 296, 365, 551, 640, 805, 868
Cfr13I GGNCC 4 cut(s) 397, 858, 1207, 1208
CseI GACGC 2 cut(s) 65, 1114
Csp6I GTAC 5 cut(s) 130, 174, 661, 736, 952
CviAII CATG 5 cut(s) 448, 520, 901, 1075, 1306
CviQI GTAC 5 cut(s) 130, 174, 661, 736, 952
DdeI CTNAG 5 cut(s) 68, 117, 474, 651, 679
DpnI GATC 7 cut(s) 150, 230, 606, 742, 1081, 1142, 1238
DpnII GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
Eam1104I CTCTTC 1 cut(s) 366
EarI CTCTTC 1 cut(s) 366
Eco147I AGGCCT 2 cut(s) 922, 1117
Eco24I GRGCYC 1 cut(s) 1211
Eco47I GGWCC 2 cut(s) 397, 858
Eco47III AGCGCT 1 cut(s) 867
Eco57I CTGAAG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 401
EcoRI GAATTC 3 cut(s) 11, 557, 674
EcoRII CCWGG 4 cut(s) 433, 788, 990, 1112
EcoT38I GRGCYC 1 cut(s) 1211
FaeI CATG 5 cut(s) 451, 523, 904, 1078, 1309
FatI CATG 5 cut(s) 447, 519, 900, 1074, 1305
FauI CCCGC 1 cut(s) 942
FbaI TGATCA 2 cut(s) 228, 1140
Fnu4HI GCNGC 4 cut(s) 27, 878, 938, 941
FokI GGATG 2 cut(s) 209, 248
FriOI GRGCYC 1 cut(s) 1211
Fsp4HI GCNGC 4 cut(s) 27, 878, 938, 941
FspBI CTAG 4 cut(s) 699, 1037, 1155, 1336
GlaI GCGC 6 cut(s) 295, 364, 550, 639, 804, 867
GluI GCNGC 4 cut(s) 27, 878, 938, 941
GsuI CTGGAG 1 cut(s) 473
HaeII RGCGCY 3 cut(s) 552, 806, 869
HaeIII GGCC 6 cut(s) 513, 788, 922, 1117, 1127, 1209
HapII CCGG 5 cut(s) 276, 324, 395, 1211, 1223
HgaI GACGC 2 cut(s) 65, 1114
HhaI GCGC 6 cut(s) 296, 365, 551, 640, 805, 868
Hin1II CATG 5 cut(s) 451, 523, 904, 1078, 1309
Hin6I GCGC 6 cut(s) 294, 363, 549, 638, 803, 866
HinP1I GCGC 6 cut(s) 294, 363, 549, 638, 803, 866
HincII GTYRAC 1 cut(s) 913
HindII GTYRAC 1 cut(s) 913
HindIII AAGCTT 1 cut(s) 764
HinfI GANTC 4 cut(s) 20, 406, 457, 523
HpaII CCGG 5 cut(s) 276, 324, 395, 1211, 1223
HphI GGTGA 3 cut(s) 175, 490, 1010
Hpy166II GTNNAC 4 cut(s) 259, 565, 593, 913
Hpy188I TCNGA 6 cut(s) 17, 153, 196, 682, 858, 1034
Hpy188III TCNNGA 7 cut(s) 139, 562, 671, 1043, 1054, 1138, 1144
Hpy8I GTNNAC 4 cut(s) 259, 565, 593, 913
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 7 cut(s) 115, 241, 323, 754, 778, 1128, 1222
HpyCH4III ACNGT 4 cut(s) 169, 758, 1020, 1070
HpyCH4IV ACGT 1 cut(s) 1278
HpyCH4V TGCA 9 cut(s) 200, 321, 440, 519, 667, 816, 839, 1028, 1049
HpyF3I CTNAG 5 cut(s) 68, 117, 474, 651, 679
HpySE526I ACGT 1 cut(s) 1278
Hsp92II CATG 5 cut(s) 451, 523, 904, 1078, 1309
HspAI GCGC 6 cut(s) 294, 363, 549, 638, 803, 866
Ksp22I TGATCA 2 cut(s) 228, 1140
Kzo9I GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
LmnI GCTCC 1 cut(s) 332
Lsp1109I GCAGC 2 cut(s) 864, 927
LweI GCATC 4 cut(s) 187, 226, 676, 1036
MaeI CTAG 4 cut(s) 699, 1037, 1155, 1336
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 5 cut(s) 163, 478, 998, 1060, 1070
MalI GATC 7 cut(s) 150, 230, 606, 742, 1081, 1142, 1238
MboI GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
MboII GAAGA 5 cut(s) 256, 383, 806, 1279, 1331
MfeI CAATTG 1 cut(s) 596
MflI RGATCY 3 cut(s) 604, 740, 1079
MhlI GDGCHC 1 cut(s) 1211
MluCI AATT 8 cut(s) 11, 485, 557, 596, 674, 811, 926, 979
MluI ACGCGT 1 cut(s) 57
MlyI GAGTC 2 cut(s) 14, 400
MmeI TCCRAC 2 cut(s) 174, 1012
MslI CAYNNNNRTG 3 cut(s) 161, 844, 1277
MspA1I CMGCKG 2 cut(s) 67, 940
MspI CCGG 5 cut(s) 276, 324, 395, 1211, 1223
MspR9I CCNGG 6 cut(s) 325, 435, 790, 992, 1114, 1211
MunI CAATTG 1 cut(s) 596
MvaI CCWGG 4 cut(s) 435, 790, 992, 1114
MvnI CGCG 5 cut(s) 59, 296, 365, 640, 1108
NciI CCSGG 2 cut(s) 325, 1211
NdeII GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
NlaIII CATG 5 cut(s) 451, 523, 904, 1078, 1309
NlaIV GGNNCC 3 cut(s) 99, 399, 1209
NmuCI GTSAC 4 cut(s) 163, 478, 998, 1060
NspI RCATGY 1 cut(s) 451
NspV TTCGAA 1 cut(s) 825
PaqCI CACCTGC 1 cut(s) 986
PceI AGGCCT 2 cut(s) 922, 1117
PcsI WCGNNNNNNNCGW 1 cut(s) 1169
PfeI GAWTC 2 cut(s) 457, 523
PflFI GACNNNGTC 1 cut(s) 1150
PkrI GCNGC 4 cut(s) 28, 879, 939, 942
PleI GAGTC 2 cut(s) 14, 400
PpsI GAGTC 2 cut(s) 14, 400
Psp6I CCWGG 4 cut(s) 433, 788, 990, 1112
PspGI CCWGG 4 cut(s) 433, 788, 990, 1112
PspN4I GGNNCC 3 cut(s) 99, 399, 1209
PspOMI GGGCCC 1 cut(s) 1207
PspPI GGNCC 4 cut(s) 397, 858, 1207, 1208
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 3 cut(s) 604, 740, 1079
PsyI GACNNNGTC 1 cut(s) 1150
PvuII CAGCTG 1 cut(s) 67
RsaI GTAC 5 cut(s) 131, 175, 662, 737, 953
RsaNI GTAC 5 cut(s) 130, 174, 661, 736, 952
RseI CAYNNNNRTG 3 cut(s) 161, 844, 1277
SatI GCNGC 4 cut(s) 27, 878, 938, 941
Sau3AI GATC 7 cut(s) 148, 228, 604, 740, 1079, 1140, 1236
Sau96I GGNCC 4 cut(s) 397, 858, 1207, 1208
SchI GAGTC 2 cut(s) 14, 400
ScrFI CCNGG 6 cut(s) 325, 435, 790, 992, 1114, 1211
SduI GDGCHC 1 cut(s) 1211
SfaNI GCATC 4 cut(s) 187, 226, 676, 1036
SfuI TTCGAA 1 cut(s) 825
SinI GGWCC 2 cut(s) 397, 858
SmiMI CAYNNNNRTG 3 cut(s) 161, 844, 1277
SpeI ACTAGT 1 cut(s) 1036
Sse9I AATT 8 cut(s) 11, 485, 557, 596, 674, 811, 926, 979
SseBI AGGCCT 2 cut(s) 922, 1117
SsiI CCGC 6 cut(s) 27, 107, 161, 296, 935, 938
SspMI CTAG 4 cut(s) 699, 1037, 1155, 1336
StuI AGGCCT 2 cut(s) 922, 1117
StyD4I CCNGG 6 cut(s) 323, 433, 788, 990, 1112, 1209
TaaI ACNGT 4 cut(s) 169, 758, 1020, 1070
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 4 cut(s) 140, 147, 825, 1098
TasI AATT 8 cut(s) 11, 485, 557, 596, 674, 811, 926, 979
TatI WGTACW 2 cut(s) 129, 735
TauI GCSGC 2 cut(s) 29, 940
TfiI GAWTC 2 cut(s) 457, 523
TscAI CASTG 3 cut(s) 763, 1023, 1069
TseFI GTSAC 4 cut(s) 163, 478, 998, 1060
TseI GCWGC 2 cut(s) 877, 940
Tsp45I GTSAC 4 cut(s) 163, 478, 998, 1060
TspDTI ATGAA 3 cut(s) 536, 738, 1322
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 3 cut(s) 763, 1023, 1069
Tth111I GACNNNGTC 1 cut(s) 1150
VpaK11BI GGWCC 2 cut(s) 397, 858
XapI RAATTY 6 cut(s) 11, 485, 557, 674, 926, 979
XceI RCATGY 1 cut(s) 451
XcmI CCANNNNNNNNNTGG 1 cut(s) 1120
XspI CTAG 4 cut(s) 699, 1037, 1155, 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.