pycom06g12870

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
17970324 .. 17972820
2497 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g12870.2

Sequence Viewer

Length: 1305 bp
ATGGGGGATACCAGTGACCATACCTTTGAGCTTATTGTAAAGAAGGAAGAACCTACTCTGGTGCCTCCTGAATCCGAAACGGAGAAGGGTCTGTACTACCTCTCGAACCTGGACCAGAACATTGCGGTCATAGTCCGAACCATGTACTGCTTCAAATCGGATTCAAAAGGGAACGAAGAAGCTGCGGAAGTCATAAAGAATGCATTGTCAAAAATTCTTGTTCACTATTACCCTTTTGCAGGAAAGTTAACTATCAGCGCAGAAGGGAAGCTGATTATCGATTGCACAGGAGACGGTGCTATGTTTGTTGAAGCTGAAGCCAACTGCGAAATGGAAAAGATAGGTGACACAACAAAGCCTGATCCTAAGACTCTTGGGAATCTGGTTCATGATATTCCTGGTGCCAAGAACATACTTGAGATTCCTCTTTTGACAGTTCAGGTGACTAAATTCACATGTGGAGGGTTTGCTCTAGGGCTATGTATCAACCATTGTACGTCTGATGGTATCTCTGTAATGGAATTTATCAATTCATGGGGGGATACCGCAAGAGGCTTGCCGCTCAAGGTTGTGCCATTTCTTGACAGAAACATACTCAAACCCAGAAACCCACCAAAGATAGAGTTTACTCATGACGAATTCCTTCAGATCAAAGACATATCGGAAAACTCCAAGCTCTATGAGGAAGAAGAACTGCTATACAGCACCTTCTGTTTCAACCCCGAGAAGCTCGAAAAGCTGAAGAAAATGGCCATGGAAGATGGGGTTCTTGAAAACTGCACAACATTTAAAGCGCTCTCCGCTTTTGTGTGGAGAGCTAGAACTAAGGCCTTGAGAATGAGACCGGATCAAAAAATGAAGCTCCTTTTCGCCGTTGATGGCCGCTCAAAACTTAAGCCACCAGTACCAGAAGGGTACTTTGGGAATGCAATTTTGTTGACACATGCACTGTGCAGTGCTGGGGAGTTACTGGAAAATCCGTTGTCATTTGCAGTTGGGTTAGTTGATAAGGCGGTTAAAATGGTGACGAGCAGTTATATGAGGTCGGTGGTCGATTACTTTGAAATGACAAGAGCTAGGCCTTCTTTGGCAGCAACCCTTTTGATAACAGCTTGGTCCAAGCTTAGTTTCCACACAACTGACTTTGGCTGGGGAGAGCCTGTGTTTTCAGGGCCGGTGGGTTTGCCTGAGAAGGAAGTAAGTTTGTTTCTACCTCGTGGAGAAGACAGGAAAAGCATAAATGTGCTTTTGGGTTTGCCAGCTTCTGCTATGGAGATCTTTGAAGATCTGACGAGGCAGATTTAA

Protein Analysis

435

Amino Acids

48.28

Weight (kDa)

5.42

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 61, 401
AccBSI CCGCTC 2 cut(s) 562, 885
AciI CCGC 7 cut(s) 125, 185, 546, 560, 801, 883, 1013
AclWI GGATC 2 cut(s) 356, 855
AcoI YGGCCR 2 cut(s) 750, 880
AcsI RAATTY 4 cut(s) 213, 449, 521, 638
AcuI CTGAAG 3 cut(s) 336, 629, 761
AfaI GTAC 5 cut(s) 95, 146, 496, 906, 917
AfeI AGCGCT 1 cut(s) 795
AfiI CCNNNNNNNGG 1 cut(s) 239
AflII CTTAAG 1 cut(s) 893
AflIII ACRYGT 1 cut(s) 455
AgsI TTSAA 7 cut(s) 154, 165, 311, 718, 773, 1064, 1283
AjnI CCWGG 2 cut(s) 108, 397
AjuI GAANNNNNNNTTGG 4 cut(s) 903, 935, 1112, 1144
Alw26I GTCTC 2 cut(s) 285, 835
AlwI GGATC 2 cut(s) 356, 855
AlwNI CAGNNNCTG 1 cut(s) 1265
Ama87I CYCGRG 1 cut(s) 722
Aor51HI AGCGCT 1 cut(s) 795
AoxI GGCC 5 cut(s) 750, 828, 880, 1079, 1172
ApeKI GCWGC 2 cut(s) 182, 1091
ApoI RAATTY 4 cut(s) 213, 449, 521, 638
ArsI GACNNNNNNTTYG 2 cut(s) 8, 40
Asp700I GAANNNNTTC 1 cut(s) 642
AspLEI GCGC 2 cut(s) 260, 796
AspS9I GGNCC 3 cut(s) 112, 1116, 1172
AsuHPI GGTGA 3 cut(s) 356, 454, 1036
AvaI CYCGRG 1 cut(s) 722
AvaII GGWCC 2 cut(s) 112, 1116
BalI TGGCCA 1 cut(s) 752
BanI GGYRCC 2 cut(s) 61, 401
BarI GAAGNNNNNNTAC 2 cut(s) 77, 109
BauI CACGAG 1 cut(s) 1215
BbsI GAAGAC 1 cut(s) 1230
BbvI GCAGC 2 cut(s) 169, 1103
BccI CCATC 3 cut(s) 497, 755, 872
BceAI ACGGC 1 cut(s) 857
BcgI CGANNNNNNTGC 2 cut(s) 164, 198
BciT130I CCWGG 2 cut(s) 110, 399
BciVI GTATCC 1 cut(s) 535
BcoDI GTCTC 2 cut(s) 285, 835
BfaI CTAG 3 cut(s) 473, 819, 1077
BfoI RGCGCY 1 cut(s) 797
BfrI CTTAAG 1 cut(s) 893
BfuI GTATCC 1 cut(s) 535
BglII AGATCT 2 cut(s) 1275, 1285
BisI GCNGC 4 cut(s) 183, 560, 883, 1092
BlsI GCNGC 4 cut(s) 184, 561, 884, 1093
Bme1390I CCNGG 2 cut(s) 110, 399
Bme18I GGWCC 2 cut(s) 112, 1116
BmeT110I CYCGRG 1 cut(s) 722
BmgT120I GGNCC 3 cut(s) 112, 1116, 1172
BmiI GGNNCC 2 cut(s) 63, 403
BmrFI CCNGG 2 cut(s) 110, 399
BpiI GAAGAC 1 cut(s) 1230
BpuEI CTTGAG 3 cut(s) 437, 548, 853
Bsa29I ATCGAT 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 835
BsaJI CCNNGG 1 cut(s) 753
BsaWI WCCGGW 1 cut(s) 844
BsaXI ACNNNNNCTCC 2 cut(s) 1146, 1176
Bsc4I CCNNNNNNNGG 1 cut(s) 239
Bse118I RCCGGY 1 cut(s) 1174
Bse1I ACTGG 3 cut(s) 12, 902, 975
Bse3DI GCAATG 1 cut(s) 120
BseBI CCWGG 2 cut(s) 110, 399
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 1 cut(s) 753
BseLI CCNNNNNNNGG 1 cut(s) 239
BseMI GCAATG 1 cut(s) 120
BseMII CTCAG 1 cut(s) 1179
BseNI ACTGG 3 cut(s) 12, 902, 975
BseXI GCAGC 2 cut(s) 169, 1103
BseYI CCCAGC 2 cut(s) 959, 1149
BsgI GTGCAG 2 cut(s) 763, 973
BshFI GGCC 5 cut(s) 752, 830, 882, 1081, 1174
BshNI GGYRCC 2 cut(s) 61, 401
BshVI ATCGAT 1 cut(s) 279
BsiHKCI CYCGRG 1 cut(s) 722
BsiSI CCGG 2 cut(s) 845, 1175
BslI CCNNNNNNNGG 1 cut(s) 239
BsmAI GTCTC 2 cut(s) 285, 835
BsmBI CGTCTC 1 cut(s) 285
BsmI GAATGC 2 cut(s) 205, 931
BsnI GGCC 5 cut(s) 752, 830, 882, 1081, 1174
Bso31I GGTCTC 1 cut(s) 835
BsoBI CYCGRG 1 cut(s) 722
Bsp143I GATC 5 cut(s) 361, 648, 847, 1275, 1285
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 7 cut(s) 125, 185, 546, 560, 801, 883, 1013
BspANI GGCC 5 cut(s) 752, 830, 882, 1081, 1174
BspCNI CTCAG 1 cut(s) 1180
BspDI ATCGAT 1 cut(s) 279
BspHI TCATGA 2 cut(s) 388, 631
BspLI GGNNCC 2 cut(s) 63, 403
BspPI GGATC 2 cut(s) 356, 855
BspT107I GGYRCC 2 cut(s) 61, 401
BspTI CTTAAG 1 cut(s) 893
BspTNI GGTCTC 1 cut(s) 835
BsrBI CCGCTC 2 cut(s) 562, 885
BsrDI GCAATG 1 cut(s) 120
BsrFI RCCGGY 1 cut(s) 1174
BsrI ACTGG 3 cut(s) 12, 902, 975
BssAI RCCGGY 1 cut(s) 1174
BssECI CCNNGG 1 cut(s) 753
BssMI GATC 5 cut(s) 361, 648, 847, 1275, 1285
BssSI CACGAG 1 cut(s) 1215
BssT1I CCWWGG 1 cut(s) 753
Bst2BI CACGAG 1 cut(s) 1215
Bst2UI CCWGG 2 cut(s) 110, 399
Bst4CI ACNGT 3 cut(s) 296, 436, 951
BstAFI CTTAAG 1 cut(s) 893
BstC8I GCNNGC 2 cut(s) 557, 1260
BstDEI CTNAG 4 cut(s) 366, 825, 1124, 1188
BstDSI CCRYGG 1 cut(s) 753
BstENI CCTNNNNNAGG 1 cut(s) 237
BstH2I RGCGCY 1 cut(s) 797
BstHHI GCGC 2 cut(s) 260, 796
BstKTI GATC 5 cut(s) 364, 651, 850, 1278, 1288
BstMAI GTCTC 2 cut(s) 285, 835
BstMBI GATC 5 cut(s) 361, 648, 847, 1275, 1285
BstMWI GCNNNNNNNGC 2 cut(s) 736, 800
BstNI CCWGG 2 cut(s) 110, 399
BstNSI RCATGY 2 cut(s) 459, 947
BstSCI CCNGG 2 cut(s) 108, 397
BstV1I GCAGC 2 cut(s) 169, 1103
BstV2I GAAGAC 1 cut(s) 1230
BstX2I RGATCY 2 cut(s) 1275, 1285
BstYI RGATCY 2 cut(s) 1275, 1285
Bsu15I ATCGAT 1 cut(s) 279
BsuI GTATCC 1 cut(s) 535
BsuRI GGCC 5 cut(s) 752, 830, 882, 1081, 1174
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 1 cut(s) 753
BtsI GCAGTG 1 cut(s) 961
BtsIMutI CAGTG 3 cut(s) 19, 947, 961
Cac8I GCNNGC 2 cut(s) 557, 1260
CaiI CAGNNNCTG 1 cut(s) 1265
CciI TCATGA 2 cut(s) 388, 631
CfoI GCGC 2 cut(s) 260, 796
Cfr10I RCCGGY 1 cut(s) 1174
Cfr13I GGNCC 3 cut(s) 112, 1116, 1172
ClaI ATCGAT 1 cut(s) 279
Csp6I GTAC 5 cut(s) 94, 145, 495, 905, 916
CviAII CATG 7 cut(s) 142, 389, 456, 534, 632, 754, 944
CviQI GTAC 5 cut(s) 94, 145, 495, 905, 916
DdeI CTNAG 4 cut(s) 366, 825, 1124, 1188
DpnI GATC 5 cut(s) 363, 650, 849, 1277, 1287
DpnII GATC 5 cut(s) 361, 648, 847, 1275, 1285
DraI TTTAAA 1 cut(s) 790
EaeI YGGCCR 2 cut(s) 750, 880
Eco130I CCWWGG 1 cut(s) 753
Eco147I AGGCCT 2 cut(s) 830, 1081
Eco31I GGTCTC 1 cut(s) 835
Eco47I GGWCC 2 cut(s) 112, 1116
Eco47III AGCGCT 1 cut(s) 795
Eco57I CTGAAG 3 cut(s) 336, 629, 761
Eco88I CYCGRG 1 cut(s) 722
EcoNI CCTNNNNNAGG 1 cut(s) 237
EcoRI GAATTC 1 cut(s) 638
EcoRII CCWGG 2 cut(s) 108, 397
EcoT14I CCWWGG 1 cut(s) 753
EcoT22I ATGCAT 1 cut(s) 205
ErhI CCWWGG 1 cut(s) 753
Esp3I CGTCTC 1 cut(s) 285
FaeI CATG 7 cut(s) 145, 392, 459, 537, 635, 757, 947
FatI CATG 7 cut(s) 141, 388, 455, 533, 631, 753, 943
Fnu4HI GCNGC 4 cut(s) 183, 560, 883, 1092
Fsp4HI GCNGC 4 cut(s) 183, 560, 883, 1092
FspBI CTAG 3 cut(s) 473, 819, 1077
GlaI GCGC 2 cut(s) 259, 795
GluI GCNGC 4 cut(s) 183, 560, 883, 1092
GsaI CCCAGC 2 cut(s) 963, 1153
HaeII RGCGCY 1 cut(s) 797
HaeIII GGCC 5 cut(s) 752, 830, 882, 1081, 1174
HapII CCGG 2 cut(s) 845, 1175
HhaI GCGC 2 cut(s) 260, 796
Hin1II CATG 7 cut(s) 145, 392, 459, 537, 635, 757, 947
Hin6I GCGC 2 cut(s) 258, 794
HinP1I GCGC 2 cut(s) 258, 794
HincII GTYRAC 2 cut(s) 249, 939
HindII GTYRAC 2 cut(s) 249, 939
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 5 cut(s) 71, 161, 370, 379, 421
HpaI GTTAAC 1 cut(s) 249
HpaII CCGG 2 cut(s) 845, 1175
HphI GGTGA 3 cut(s) 356, 454, 1036
Hpy166II GTNNAC 4 cut(s) 223, 249, 627, 939
Hpy188I TCNGA 7 cut(s) 76, 137, 160, 502, 648, 664, 1290
Hpy188III TCNNGA 6 cut(s) 68, 103, 389, 581, 632, 770
Hpy8I GTNNAC 4 cut(s) 223, 249, 627, 939
HpyAV CCTTC 8 cut(s) 37, 79, 257, 653, 718, 905, 1092, 1186
HpyCH4III ACNGT 3 cut(s) 296, 436, 951
HpyCH4IV ACGT 1 cut(s) 497
HpyCH4V TGCA 8 cut(s) 203, 239, 285, 780, 929, 947, 954, 992
HpyF10VI GCNNNNNNNGC 2 cut(s) 736, 800
HpyF3I CTNAG 4 cut(s) 366, 825, 1124, 1188
HpySE526I ACGT 1 cut(s) 497
Hsp92II CATG 7 cut(s) 145, 392, 459, 537, 635, 757, 947
HspAI GCGC 2 cut(s) 258, 794
KspAI GTTAAC 1 cut(s) 249
Kzo9I GATC 5 cut(s) 361, 648, 847, 1275, 1285
LmnI GCTCC 1 cut(s) 867
Lsp1109I GCAGC 2 cut(s) 169, 1103
MaeI CTAG 3 cut(s) 473, 819, 1077
MaeII ACGT 1 cut(s) 497
MaeIII GTNAC 5 cut(s) 14, 344, 442, 966, 1024
MalI GATC 5 cut(s) 363, 650, 849, 1277, 1287
MbiI CCGCTC 2 cut(s) 562, 885
MboI GATC 5 cut(s) 361, 648, 847, 1275, 1285
MboII GAAGA 8 cut(s) 59, 188, 698, 701, 754, 770, 1235, 1295
MflI RGATCY 2 cut(s) 1275, 1285
MlsI TGGCCA 1 cut(s) 752
MluCI AATT 6 cut(s) 213, 449, 521, 529, 638, 930
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 1 cut(s) 364
MnlI CCTC 9 cut(s) 75, 110, 435, 455, 545, 676, 1035, 1224, 1287
Mox20I TGGCCA 1 cut(s) 752
Mph1103I ATGCAT 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 642
MscI TGGCCA 1 cut(s) 752
MseI TTAA 5 cut(s) 248, 789, 894, 1017, 1303
MslI CAYNNNNRTG 1 cut(s) 1241
Msp20I TGGCCA 1 cut(s) 752
MspCI CTTAAG 1 cut(s) 893
MspI CCGG 2 cut(s) 845, 1175
MspR9I CCNGG 2 cut(s) 110, 399
Mva1269I GAATGC 2 cut(s) 205, 931
MvaI CCWGG 2 cut(s) 110, 399
MwoI GCNNNNNNNGC 2 cut(s) 736, 800
NcoI CCATGG 1 cut(s) 753
NdeII GATC 5 cut(s) 361, 648, 847, 1275, 1285
NlaIII CATG 7 cut(s) 145, 392, 459, 537, 635, 757, 947
NlaIV GGNNCC 2 cut(s) 63, 403
NmuCI GTSAC 4 cut(s) 14, 344, 442, 1024
NsiI ATGCAT 1 cut(s) 205
NspI RCATGY 2 cut(s) 459, 947
PagI TCATGA 2 cut(s) 388, 631
PceI AGGCCT 2 cut(s) 830, 1081
PciI ACATGT 1 cut(s) 455
PctI GAATGC 2 cut(s) 205, 931
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 4 cut(s) 71, 161, 379, 421
PkrI GCNGC 4 cut(s) 184, 561, 884, 1093
PleI GAGTC 1 cut(s) 364
PpsI GAGTC 1 cut(s) 364
PscI ACATGT 1 cut(s) 455
Psp6I CCWGG 2 cut(s) 108, 397
PspFI CCCAGC 2 cut(s) 959, 1149
PspGI CCWGG 2 cut(s) 108, 397
PspN4I GGNNCC 2 cut(s) 63, 403
PspPI GGNCC 3 cut(s) 112, 1116, 1172
PstNI CAGNNNCTG 1 cut(s) 1265
PsuI RGATCY 2 cut(s) 1275, 1285
RsaI GTAC 5 cut(s) 95, 146, 496, 906, 917
RsaNI GTAC 5 cut(s) 94, 145, 495, 905, 916
RseI CAYNNNNRTG 1 cut(s) 1241
SaqAI TTAA 5 cut(s) 248, 789, 894, 1017, 1303
SatI GCNGC 4 cut(s) 183, 560, 883, 1092
Sau3AI GATC 5 cut(s) 361, 648, 847, 1275, 1285
Sau96I GGNCC 3 cut(s) 112, 1116, 1172
SchI GAGTC 1 cut(s) 364
ScrFI CCNGG 2 cut(s) 110, 399
SinI GGWCC 2 cut(s) 112, 1116
SmiMI CAYNNNNRTG 1 cut(s) 1241
SmlI CTYRAG 4 cut(s) 416, 563, 832, 893
SmoI CTYRAG 4 cut(s) 416, 563, 832, 893
Sse9I AATT 6 cut(s) 213, 449, 521, 529, 638, 930
SseBI AGGCCT 2 cut(s) 830, 1081
SsiI CCGC 7 cut(s) 125, 185, 546, 560, 801, 883, 1013
SspMI CTAG 3 cut(s) 473, 819, 1077
StuI AGGCCT 2 cut(s) 830, 1081
StyD4I CCNGG 2 cut(s) 108, 397
StyI CCWWGG 1 cut(s) 753
TaaI ACNGT 3 cut(s) 296, 436, 951
TaiI ACGT 1 cut(s) 500
TaqI TCGA 4 cut(s) 104, 279, 732, 1053
TasI AATT 6 cut(s) 213, 449, 521, 529, 638, 930
TatI WGTACW 2 cut(s) 93, 144
TauI GCSGC 2 cut(s) 562, 885
TfiI GAWTC 4 cut(s) 71, 161, 379, 421
Tru1I TTAA 5 cut(s) 248, 789, 894, 1017, 1303
Tru9I TTAA 5 cut(s) 248, 789, 894, 1017, 1303
TscAI CASTG 3 cut(s) 19, 954, 961
TseFI GTSAC 4 cut(s) 14, 344, 442, 1024
TseI GCWGC 2 cut(s) 182, 1091
Tsp45I GTSAC 4 cut(s) 14, 344, 442, 1024
TspDTI ATGAA 3 cut(s) 377, 522, 872
TspGWI ACGGA 2 cut(s) 95, 969
TspRI CASTG 3 cut(s) 19, 954, 961
Vha464I CTTAAG 1 cut(s) 893
VpaK11BI GGWCC 2 cut(s) 112, 1116
XagI CCTNNNNNAGG 1 cut(s) 237
XapI RAATTY 4 cut(s) 213, 449, 521, 638
XceI RCATGY 2 cut(s) 459, 947
XcmI CCANNNNNNNNNTGG 1 cut(s) 328
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 3 cut(s) 473, 819, 1077
Zsp2I ATGCAT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.