Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0006113

Physical Location & Seq

Genomic Coordinates Forward (+)

6778712 .. 6781060

Gene Structure 2349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g06770.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCGGCCACCACCATAGCTCCACCCTCCTCCTTCTCCAAAACCTCTCTTCTCTCCTCCAACAAATCCTCACACCCACTTTCCCGATTTAACCTCATCCCCTACTCCTCTGTCCCCCATTTCCGCCCTCTCCAAATCTCCTCCTCCCTCTCCCCCAAATCCGCCGCCGCCGCCGCCACAACCACCGCCGCTCCTCCAGACCCATCTATTTTGGTTCCCCGTTTTGCCCCCGACGAGCCCAGAAAAGGCGCCGATGTCCTCGTGGAGGCCCTGGAGCGCCAGGGCGTCACCACCGTCTTCGCCTACCCCGGCGGCGCGTCCATGGAGATCCACCAGGCCCTCACGCGCTCCACCACCATCCGCAACGTCCTCCCCCGCCACGAGCAGGGCGGCGTCTTCGCCGCCGAGGGATACGCGCGCGCGTCTGGCCTCCCCGGTGTCTGCATTGCCACCTCCGGCCCCGGCGCCACCAATCTCGTCAGCGGCCTCGCCGACGCGCTCATGGACAGCATTCCCATGGTGGCCATCACCGGACAGGTCCCCCGCCGCATGATCGGAACCGACGCCTTTCAGGAGACTCCCATTGTTGAGGTAACCAGATCCATCACCAAGCACAATTACCTTGTTCTTGATGTTGATGACATTCCTAGGATTGTTAAAGAGGCCTTTTTCCTAGCCACGTCGGGTAGACCTGGCCCGGTTTTGATTGATATACCCAAAGATGTGCAGCAACAGCTTGTGGTTCCTGATTGGGACCAACCCATTAGGTTAGCTGGGTATATGTCTAGGTTGCCCCAGAGCCCCAGTGAGGTTCATTTGGAGCAGATTGTGAGGTTGGTTTCCGAGTCTAAGAAACCGGTTTTGTATGTTGGTGGAGGGTGTTTGAATTCCAGTGAGGAGTTGAGGCGGTTTGTGGAGCTTACTGGGATCCCGGTTACTAGTACTTTGATGGGTCTCGGGACTTACCCCAGCTCCGATGAGGATGATTTGTCACTGCAGATGCTTGGGATGCATGGGACTGTTTATGCTAACTATGCTGTCGACAAGGCTGACTTGTTGCTGGCTTTTGGTGTGAGGTTTGATGATAGGGTGACCGGGAAGCTGGAGGCATTTGCTAGCCGGGCGAAGATTGTGCACATTGATATTGATTCTGCAGAGATTGGGAAGAACAAGCAGCCTCATGTGTCTGTTTGTGCTGATGTGAAACCGGCGTTGCAAGGGTTGAACAGGATATTGGAGGCAAAATTGGAGAAGCTTAAACTTGATTTTTCAGCTTGGAGGGCGGAGCTGAAAGAGCAGAAGCTGAAGTTTCCGTTGGGTTACAAGACTTTCGAGGAGGCCATCCCTCCTCAGTATGCCATTCAGGTTCTTGATGAGTTAACTGAAGGGAAGGCTATTATAAGCACTGGTGTTGGGCAACATCAGATGTGGGCGGCTCAACACTATAAGTATCTTAGGCCTCGACAGTGGTTGACTTCGGGGGGTTTAGGAGCCATGGGTTTTGGATTGCCAGCTGCTATGGGGGCTGCTGCGGCAAATCCAGATGCTATTGTTGTTGATATAGATGGTGATGGAAGTTTTATGATGAATGTCCAAGAATTGGCAACAATCAAGGTGGAGAATCTTCCGGTCAAAATTCTTCTGTTAAACAATCAGCATTTGGGTATGGTTGTTCAGTGGGAGGATCGCTTCTATAAGGCAAACAGGGCTCACACATACTTGGGCAACCCAGCAAATGAGTCTGAGATTTTCCCGAATATGCTAAAGTTTGCAGAAGCTTGTGGTGTACCAGCTGCCCGTGTGACAAAGAAGCAAGACCTCAAAGCAGCAATCCAGAAAATGTTGGATACGCCTGGACCATACTTGTTGGATGTCATAGTACCCCATCAAGAGCATGTGTTGCCTATGATCCCAAGTGGTGGTGCCTTCAAAGATGTGATAACTGAGGGCGATGGAAGAAGAAGTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003984 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006573 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009099 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016740 GO:0016744 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

657

Amino Acids

71.11

Weight (kDa)

6.34

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPP_enzyme_N	PF02776	82 - 192	5.5e-37	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_M	PF00205	273 - 408	1.9e-44	Thiamine pyrophosphate enzyme, central domain
TPP_enzyme_C	PF02775	470 - 625	2.7e-51	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48560
fragaria_vesca	FvH4_7g06770
malus_domestica	MD06G1028700.v1.1 MD10G1013700.v1.1
prunus_persica	Prupe.5G043100_v2.0.a1 Prupe.8G001300_v2.0.a1 Prupe.8G001300_v2.0.a1
pyrus_communis	pycom06g02280 pycom10g00840
rosa_chinensis	RchiOBHm_Chr7g0208791
rosa_laevigata	RLG00000003195 RLG00000015583
rosa_multiflora	Rmu_co8493263.1_g000001 Rmu_sc0000278.1_g000002 Rmu_sc0008663.1_g000001 Rmu_sc0018750.1_g000002
rosa_roxburghii	Rroxscaffold_3G00250260 Rroxscaffold_7G00217760
rosa_rugosa	Rorug05G0492000 Rorug07G0105800
rosa_samantha	Rh6AG001800 Rh7AG241000 Rh7BG235900 Rh7CG255600 Rh7DG247000
rosa_wichuraiana	Rw6G000240 Rw7G020440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1400
AccB1I	GGYRCC	3 cut(s)	248, 464, 1922
AccB7I	CCANNNNNTGG	2 cut(s)	1600, 1919
AccBSI	CCGCTC	1 cut(s)	191
AccI	GTMKAC	2 cut(s)	688, 1041
AccII	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
AclWI	GGATC	6 cut(s)	322, 594, 922, 935, 1692, 1903
AcoI	YGGCCR	2 cut(s)	6, 522
AcsI	RAATTY	2 cut(s)	886, 1635
AcuI	CTGAAG	2 cut(s)	1325, 1404
AcyI	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
AfaI	GTAC	3 cut(s)	943, 1788, 1881
AfiI	CCNNNNNNNGG	6 cut(s)	245, 265, 385, 808, 1600, 1919
AgeI	ACCGGT	1 cut(s)	856
AgsI	TTSAA	3 cut(s)	886, 1225, 1930
AhlI	ACTAGT	1 cut(s)	938
AjiI	CACGTC	1 cut(s)	681
AjnI	CCWGG	5 cut(s)	270, 279, 333, 691, 1852
AjuI	GAANNNNNNNTTGG	4 cut(s)	1217, 1249, 1298, 1330
Alw21I	GWGCWC	1 cut(s)	1137
Alw26I	GTCTC	2 cut(s)	569, 959
Alw44I	GTGCAC	1 cut(s)	1133
AlwI	GGATC	6 cut(s)	322, 594, 922, 935, 1692, 1903
AlwNI	CAGNNNCTG	1 cut(s)	1303
Ama87I	CYCGRG	1 cut(s)	956
ApaLI	GTGCAC	1 cut(s)	1133
ApeKI	GCWGC	7 cut(s)	727, 1174, 1514, 1526, 1529, 1793, 1826
ApoI	RAATTY	2 cut(s)	886, 1635
AsiGI	ACCGGT	1 cut(s)	856
AspA2I	CCTAGG	1 cut(s)	647
AspLEI	GCGC	9 cut(s)	251, 279, 317, 348, 418, 420, 422, 467, 499
AspS9I	GGNCC	7 cut(s)	268, 337, 458, 538, 695, 754, 1856
AsuC2I	CCSGG	7 cut(s)	309, 435, 462, 698, 932, 1096, 1121
AsuHPI	GGTGA	5 cut(s)	280, 520, 598, 1102, 1580
AsuNHI	GCTAGC	1 cut(s)	1115
AvaI	CYCGRG	1 cut(s)	956
AvaII	GGWCC	3 cut(s)	538, 754, 1856
AvrII	CCTAGG	1 cut(s)	647
BaeGI	GKGCMC	1 cut(s)	1137
BalI	TGGCCA	1 cut(s)	524
BamHI	GGATCC	1 cut(s)	927
BanI	GGYRCC	3 cut(s)	248, 464, 1922
BanII	GRGCYC	3 cut(s)	240, 803, 1711
BauI	CACGAG	2 cut(s)	260, 380
BbsI	GAAGAC	2 cut(s)	289, 388
Bbv12I	GWGCWC	1 cut(s)	1137
BbvI	GCAGC	7 cut(s)	739, 1186, 1501, 1513, 1516, 1780, 1838
BcgI	CGANNNNNNTGC	2 cut(s)	1114, 1148
BciT130I	CCWGG	5 cut(s)	272, 281, 335, 693, 1854
BciVI	GTATCC	2 cut(s)	404, 1840
BcnI	CCSGG	7 cut(s)	309, 435, 462, 698, 932, 1096, 1121
BcoDI	GTCTC	2 cut(s)	569, 959
BcuI	ACTAGT	1 cut(s)	938
BfaI	CTAG	5 cut(s)	648, 674, 786, 939, 1116
BfmI	CTRYAG	2 cut(s)	995, 1152
BfoI	RGCGCY	3 cut(s)	252, 280, 468
BfuI	GTATCC	2 cut(s)	404, 1840
BlnI	CCTAGG	1 cut(s)	647
BmcAI	AGTACT	1 cut(s)	943
Bme18I	GGWCC	3 cut(s)	538, 754, 1856
BmeT110I	CYCGRG	1 cut(s)	956
BmgBI	CACGTC	1 cut(s)	681
BmgT120I	GGNCC	7 cut(s)	268, 337, 458, 538, 695, 754, 1856
BmrI	ACTGGG	2 cut(s)	798, 933
BmsI	GCATC	3 cut(s)	990, 999, 1534
BmtI	GCTAGC	1 cut(s)	1119
BmuI	ACTGGG	2 cut(s)	798, 933
BpiI	GAAGAC	2 cut(s)	289, 388
BpmI	CTGGAG	3 cut(s)	180, 293, 1124
BpuMI	CCSGG	7 cut(s)	309, 435, 462, 698, 932, 1096, 1121
BsaHI	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
BsaI	GGTCTC	1 cut(s)	959
BsaWI	WCCGGW	3 cut(s)	530, 856, 1627
BsaXI	ACNNNNNCTCC	5 cut(s)	34, 175, 205, 956, 986
Bsc4I	CCNNNNNNNGG	6 cut(s)	245, 265, 385, 808, 1600, 1919
Bse118I	RCCGGY	2 cut(s)	856, 1207
Bse1I	ACTGG	4 cut(s)	804, 891, 928, 1411
Bse3DI	GCAATG	1 cut(s)	444
BseBI	CCWGG	5 cut(s)	272, 281, 335, 693, 1854
BseGI	GGATG	6 cut(s)	96, 357, 988, 1014, 1341, 1876
BseLI	CCNNNNNNNGG	6 cut(s)	245, 265, 385, 808, 1600, 1919
BseMI	GCAATG	1 cut(s)	444
BseMII	CTCAG	3 cut(s)	1364, 1734, 1935
BseNI	ACTGG	4 cut(s)	804, 891, 928, 1411
BsePI	GCGCGC	2 cut(s)	416, 418
BseRI	GAGGAG	9 cut(s)	19, 46, 97, 130, 133, 183, 911, 1338, 1349
BseSI	GKGCMC	1 cut(s)	1137
BseXI	GCAGC	7 cut(s)	739, 1186, 1501, 1513, 1516, 1780, 1838
BseYI	CCCAGC	3 cut(s)	773, 968, 1729
BsgI	GTGCAG	1 cut(s)	746
Bsh1236I	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
BshNI	GGYRCC	3 cut(s)	248, 464, 1922
BshTI	ACCGGT	1 cut(s)	856
BsiHKAI	GWGCWC	1 cut(s)	1137
BsiHKCI	CYCGRG	1 cut(s)	956
BslFI	GGGAC	5 cut(s)	98, 524, 767, 973, 1030
BslI	CCNNNNNNNGG	6 cut(s)	245, 265, 385, 808, 1600, 1919
BsmAI	GTCTC	2 cut(s)	569, 959
BsmFI	GGGAC	5 cut(s)	98, 524, 767, 973, 1030
BsmI	GAATGC	1 cut(s)	510
Bso31I	GGTCTC	1 cut(s)	959
BsoBI	CYCGRG	1 cut(s)	956
Bsp1286I	GDGCHC	4 cut(s)	240, 803, 1137, 1711
Bsp143I	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
Bsp19I	CCATGG	3 cut(s)	321, 516, 1494
BspCNI	CTCAG	3 cut(s)	1363, 1735, 1936
BspFNI	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
BspMAI	CTGCAG	2 cut(s)	999, 1156
BspOI	GCTAGC	1 cut(s)	1119
BspPI	GGATC	6 cut(s)	322, 594, 922, 935, 1692, 1903
BspT107I	GGYRCC	3 cut(s)	248, 464, 1922
BspTNI	GGTCTC	1 cut(s)	959
BsrBI	CCGCTC	1 cut(s)	191
BsrDI	GCAATG	1 cut(s)	444
BsrFI	RCCGGY	2 cut(s)	856, 1207
BsrI	ACTGG	4 cut(s)	804, 891, 928, 1411
BssAI	RCCGGY	2 cut(s)	856, 1207
BssHII	GCGCGC	2 cut(s)	416, 418
BssMI	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
BssNI	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
BssSI	CACGAG	2 cut(s)	260, 380
BssT1I	CCWWGG	4 cut(s)	321, 516, 647, 1494
Bst2BI	CACGAG	2 cut(s)	260, 380
Bst2UI	CCWGG	5 cut(s)	272, 281, 335, 693, 1854
Bst4CI	ACNGT	3 cut(s)	295, 1021, 1467
Bst6I	CTCTTC	1 cut(s)	54
BstACI	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
BstAPI	GCANNNNNTGC	1 cut(s)	1900
BstC8I	GCNNGC	5 cut(s)	418, 420, 1062, 1117, 1512
BstDEI	CTNAG	5 cut(s)	849, 1350, 1454, 1743, 1944
BstDSI	CCRYGG	3 cut(s)	321, 516, 1494
BstEII	GGTNACC	2 cut(s)	592, 1090
BstENI	CCTNNNNNAGG	1 cut(s)	263
BstF5I	GGATG	6 cut(s)	96, 357, 988, 1014, 1341, 1876
BstFNI	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
BstH2I	RGCGCY	3 cut(s)	252, 280, 468
BstHHI	GCGC	9 cut(s)	251, 279, 317, 348, 418, 420, 422, 467, 499
BstKTI	GATC	6 cut(s)	330, 555, 602, 930, 1687, 1911
BstMAI	GTCTC	2 cut(s)	569, 959
BstMBI	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
BstNI	CCWGG	5 cut(s)	272, 281, 335, 693, 1854
BstNSI	RCATGY	1 cut(s)	1898
BstPI	GGTNACC	2 cut(s)	592, 1090
BstSFI	CTRYAG	2 cut(s)	995, 1152
BstSLI	GKGCMC	1 cut(s)	1137
BstUI	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
BstV1I	GCAGC	7 cut(s)	739, 1186, 1501, 1513, 1516, 1780, 1838
BstV2I	GAAGAC	2 cut(s)	289, 388
BstX2I	RGATCY	3 cut(s)	327, 599, 927
BstYI	RGATCY	3 cut(s)	327, 599, 927
BsuI	GTATCC	2 cut(s)	404, 1840
BtgI	CCRYGG	3 cut(s)	321, 516, 1494
BtgZI	GCGATG	1 cut(s)	1965
BtrI	CACGTC	1 cut(s)	681
BtsCI	GGATG	6 cut(s)	96, 357, 988, 1014, 1341, 1876
BtsI	GCAGTG	1 cut(s)	992
BtsIMutI	CAGTG	6 cut(s)	811, 898, 992, 1404, 1472, 1682
Cac8I	GCNNGC	5 cut(s)	418, 420, 1062, 1117, 1512
CaiI	CAGNNNCTG	1 cut(s)	1303
CfoI	GCGC	9 cut(s)	251, 279, 317, 348, 418, 420, 422, 467, 499
Cfr10I	RCCGGY	2 cut(s)	856, 1207
Cfr13I	GGNCC	7 cut(s)	268, 337, 458, 538, 695, 754, 1856
CseI	GACGC	6 cut(s)	274, 306, 382, 411, 503, 572
Csp6I	GTAC	3 cut(s)	942, 1787, 1880
CspAI	ACCGGT	1 cut(s)	856
CspCI	CAANNNNNGTGG	2 cut(s)	1596, 1631
CviAII	CATG	8 cut(s)	322, 502, 517, 550, 1013, 1181, 1495, 1895
CviQI	GTAC	3 cut(s)	942, 1787, 1880
DdeI	CTNAG	5 cut(s)	849, 1350, 1454, 1743, 1944
DinI	GGCGCC	2 cut(s)	250, 466
DpnI	GATC	6 cut(s)	329, 554, 601, 929, 1686, 1910
DpnII	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
EaeI	YGGCCR	2 cut(s)	6, 522
Eam1104I	CTCTTC	1 cut(s)	54
EarI	CTCTTC	1 cut(s)	54
EciI	GGCGGA	3 cut(s)	113, 151, 1298
Eco130I	CCWWGG	4 cut(s)	321, 516, 647, 1494
Eco147I	AGGCCT	2 cut(s)	665, 1459
Eco24I	GRGCYC	3 cut(s)	240, 803, 1711
Eco31I	GGTCTC	1 cut(s)	959
Eco47I	GGWCC	3 cut(s)	538, 754, 1856
Eco57I	CTGAAG	2 cut(s)	1325, 1404
Eco88I	CYCGRG	1 cut(s)	956
Eco91I	GGTNACC	2 cut(s)	592, 1090
EcoNI	CCTNNNNNAGG	1 cut(s)	263
EcoO109I	RGGNCCY	3 cut(s)	268, 337, 538
EcoO65I	GGTNACC	2 cut(s)	592, 1090
EcoRI	GAATTC	1 cut(s)	886
EcoRII	CCWGG	5 cut(s)	270, 279, 333, 691, 1852
EcoT14I	CCWWGG	4 cut(s)	321, 516, 647, 1494
EcoT22I	ATGCAT	1 cut(s)	1014
EcoT38I	GRGCYC	3 cut(s)	240, 803, 1711
EgeI	GGCGCC	2 cut(s)	250, 466
EheI	GGCGCC	2 cut(s)	250, 466
ErhI	CCWWGG	4 cut(s)	321, 516, 647, 1494
FaeI	CATG	8 cut(s)	325, 505, 520, 553, 1016, 1184, 1498, 1898
FalI	AAGNNNNNCTT	2 cut(s)	1037, 1069
FaqI	GGGAC	5 cut(s)	98, 524, 767, 973, 1030
FatI	CATG	8 cut(s)	321, 501, 516, 549, 1012, 1180, 1494, 1894
FauI	CCCGC	2 cut(s)	383, 551
FblI	GTMKAC	2 cut(s)	688, 1041
FokI	GGATG	6 cut(s)	83, 344, 995, 1021, 1328, 1883
FriOI	GRGCYC	3 cut(s)	240, 803, 1711
FspBI	CTAG	5 cut(s)	648, 674, 786, 939, 1116
GlaI	GCGC	9 cut(s)	250, 278, 316, 347, 417, 419, 421, 466, 498
GsaI	CCCAGC	3 cut(s)	777, 972, 1733
GsuI	CTGGAG	3 cut(s)	180, 293, 1124
HaeII	RGCGCY	3 cut(s)	252, 280, 468
HgaI	GACGC	6 cut(s)	274, 306, 382, 411, 503, 572
HhaI	GCGC	9 cut(s)	251, 279, 317, 348, 418, 420, 422, 467, 499
Hin1I	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
Hin1II	CATG	8 cut(s)	325, 505, 520, 553, 1016, 1184, 1498, 1898
Hin6I	GCGC	9 cut(s)	249, 277, 315, 346, 416, 418, 420, 465, 497
HinP1I	GCGC	9 cut(s)	249, 277, 315, 346, 416, 418, 420, 465, 497
HincII	GTYRAC	3 cut(s)	1042, 1380, 1473
HindII	GTYRAC	3 cut(s)	1042, 1380, 1473
HindIII	AAGCTT	2 cut(s)	1253, 1776
HinfI	GANTC	5 cut(s)	577, 845, 1148, 1621, 1739
HpaI	GTTAAC	1 cut(s)	1380
HphI	GGTGA	5 cut(s)	280, 520, 598, 1102, 1580
Hpy166II	GTNNAC	6 cut(s)	689, 1042, 1135, 1380, 1473, 1787
Hpy188I	TCNGA	5 cut(s)	557, 844, 976, 1425, 1744
Hpy8I	GTNNAC	6 cut(s)	689, 1042, 1135, 1380, 1473, 1787
Hpy99I	CGWCG	4 cut(s)	236, 497, 566, 685
HpyAV	CCTTC	4 cut(s)	43, 1379, 1384, 1936
HpyCH4III	ACNGT	3 cut(s)	295, 1021, 1467
HpyCH4IV	ACGT	2 cut(s)	366, 680
HpyCH4V	TGCA	8 cut(s)	444, 727, 997, 1012, 1135, 1154, 1216, 1772
HpyF3I	CTNAG	5 cut(s)	849, 1350, 1454, 1743, 1944
HpySE526I	ACGT	2 cut(s)	366, 680
Hsp92I	GRCGYC	5 cut(s)	249, 285, 393, 465, 564
Hsp92II	CATG	8 cut(s)	325, 505, 520, 553, 1016, 1184, 1498, 1898
HspAI	GCGC	9 cut(s)	249, 277, 315, 346, 416, 418, 420, 465, 497
KasI	GGCGCC	2 cut(s)	248, 464
KspAI	GTTAAC	1 cut(s)	1380
Kzo9I	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
LmnI	GCTCC	9 cut(s)	25, 196, 274, 353, 820, 916, 977, 1285, 1490
Lsp1109I	GCAGC	7 cut(s)	739, 1186, 1501, 1513, 1516, 1780, 1838
LweI	GCATC	3 cut(s)	990, 999, 1534
MaeI	CTAG	5 cut(s)	648, 674, 786, 939, 1116
MaeII	ACGT	2 cut(s)	366, 680
MaeIII	GTNAC	8 cut(s)	286, 592, 934, 990, 1090, 1319, 1801, 1964
MalI	GATC	6 cut(s)	329, 554, 601, 929, 1686, 1910
MauBI	CGCGCGCG	2 cut(s)	416, 418
MbiI	CCGCTC	1 cut(s)	191
MboI	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
MboII	GAAGA	9 cut(s)	41, 289, 388, 1138, 1177, 1616, 1631, 1968, 1971
MflI	RGATCY	3 cut(s)	327, 599, 927
MhlI	GDGCHC	4 cut(s)	240, 803, 1137, 1711
MlsI	TGGCCA	1 cut(s)	524
MluCI	AATT	5 cut(s)	616, 886, 1244, 1598, 1635
MluNI	TGGCCA	1 cut(s)	524
Mly113I	GGCGCC	2 cut(s)	249, 465
MlyI	GAGTC	3 cut(s)	571, 854, 1748
MmeI	TCCRAC	3 cut(s)	84, 1824, 1848
Mox20I	TGGCCA	1 cut(s)	524
Mph1103I	ATGCAT	1 cut(s)	1014
MscI	TGGCCA	1 cut(s)	524
MseI	TTAA	5 cut(s)	90, 657, 1257, 1379, 1646
MslI	CAYNNNNRTG	1 cut(s)	515
Msp20I	TGGCCA	1 cut(s)	524
MspA1I	CMGCKG	3 cut(s)	483, 1514, 1793
Mva1269I	GAATGC	1 cut(s)	510
MvaI	CCWGG	5 cut(s)	272, 281, 335, 693, 1854
MvnI	CGCG	7 cut(s)	317, 346, 416, 418, 420, 422, 497
NarI	GGCGCC	2 cut(s)	249, 465
NciI	CCSGG	7 cut(s)	309, 435, 462, 698, 932, 1096, 1121
NcoI	CCATGG	3 cut(s)	321, 516, 1494
NdeII	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
NheI	GCTAGC	1 cut(s)	1115
NlaIII	CATG	8 cut(s)	325, 505, 520, 553, 1016, 1184, 1498, 1898
NmeAIII	GCCGAG	1 cut(s)	430
NmuCI	GTSAC	4 cut(s)	286, 990, 1090, 1801
NsiI	ATGCAT	1 cut(s)	1014
NspI	RCATGY	1 cut(s)	1898
PauI	GCGCGC	2 cut(s)	416, 418
PceI	AGGCCT	2 cut(s)	665, 1459
PctI	GAATGC	1 cut(s)	510
PfeI	GAWTC	2 cut(s)	1148, 1621
PflMI	CCANNNNNTGG	2 cut(s)	1600, 1919
PinAI	ACCGGT	1 cut(s)	856
PleI	GAGTC	3 cut(s)	571, 853, 1747
PluTI	GGCGCC	2 cut(s)	252, 468
PpsI	GAGTC	3 cut(s)	571, 853, 1747
PpuMI	RGGWCCY	1 cut(s)	538
PsiI	TTATAA	1 cut(s)	1400
Psp5II	RGGWCCY	1 cut(s)	538
Psp6I	CCWGG	5 cut(s)	270, 279, 333, 691, 1852
PspEI	GGTNACC	2 cut(s)	592, 1090
PspFI	CCCAGC	3 cut(s)	773, 968, 1729
PspGI	CCWGG	5 cut(s)	270, 279, 333, 691, 1852
PspPI	GGNCC	7 cut(s)	268, 337, 458, 538, 695, 754, 1856
PspPPI	RGGWCCY	1 cut(s)	538
PstI	CTGCAG	2 cut(s)	999, 1156
PstNI	CAGNNNCTG	1 cut(s)	1303
PsuI	RGATCY	3 cut(s)	327, 599, 927
PteI	GCGCGC	2 cut(s)	416, 418
PvuII	CAGCTG	2 cut(s)	1514, 1793
RsaI	GTAC	3 cut(s)	943, 1788, 1881
RsaNI	GTAC	3 cut(s)	942, 1787, 1880
RseI	CAYNNNNRTG	1 cut(s)	515
SalI	GTCGAC	1 cut(s)	1040
SaqAI	TTAA	5 cut(s)	90, 657, 1257, 1379, 1646
Sau3AI	GATC	6 cut(s)	327, 552, 599, 927, 1684, 1908
Sau96I	GGNCC	7 cut(s)	268, 337, 458, 538, 695, 754, 1856
ScaI	AGTACT	1 cut(s)	943
SchI	GAGTC	3 cut(s)	571, 854, 1748
SduI	GDGCHC	4 cut(s)	240, 803, 1137, 1711
SfaNI	GCATC	3 cut(s)	990, 999, 1534
SfcI	CTRYAG	2 cut(s)	995, 1152
SfoI	GGCGCC	2 cut(s)	250, 466
SinI	GGWCC	3 cut(s)	538, 754, 1856
SmiMI	CAYNNNNRTG	1 cut(s)	515
SpeI	ACTAGT	1 cut(s)	938
Sse9I	AATT	5 cut(s)	616, 886, 1244, 1598, 1635
SseBI	AGGCCT	2 cut(s)	665, 1459
SspDI	GGCGCC	2 cut(s)	248, 464
SspMI	CTAG	5 cut(s)	648, 674, 786, 939, 1116
StuI	AGGCCT	2 cut(s)	665, 1459
StyI	CCWWGG	4 cut(s)	321, 516, 647, 1494
TaaI	ACNGT	3 cut(s)	295, 1021, 1467
TaiI	ACGT	2 cut(s)	369, 683
TaqI	TCGA	3 cut(s)	1041, 1332, 1462
TasI	AATT	5 cut(s)	616, 886, 1244, 1598, 1635
TatI	WGTACW	1 cut(s)	941
TfiI	GAWTC	2 cut(s)	1148, 1621
Tru1I	TTAA	5 cut(s)	90, 657, 1257, 1379, 1646
Tru9I	TTAA	5 cut(s)	90, 657, 1257, 1379, 1646
TscAI	CASTG	6 cut(s)	811, 898, 999, 1411, 1472, 1682
TseFI	GTSAC	4 cut(s)	286, 990, 1090, 1801
TseI	GCWGC	7 cut(s)	727, 1174, 1514, 1526, 1529, 1793, 1826
Tsp45I	GTSAC	4 cut(s)	286, 990, 1090, 1801
TspDTI	ATGAA	2 cut(s)	803, 1601
TspGWI	ACGGA	1 cut(s)	1302
TspRI	CASTG	6 cut(s)	811, 898, 999, 1411, 1472, 1682
Van91I	CCANNNNNTGG	2 cut(s)	1600, 1919
VneI	GTGCAC	1 cut(s)	1133
VpaK11BI	GGWCC	3 cut(s)	538, 754, 1856
XagI	CCTNNNNNAGG	1 cut(s)	263
XapI	RAATTY	2 cut(s)	886, 1635
XceI	RCATGY	1 cut(s)	1898
XmaJI	CCTAGG	1 cut(s)	647
XmiI	GTMKAC	2 cut(s)	688, 1041
XspI	CTAG	5 cut(s)	648, 674, 786, 939, 1116
ZrmI	AGTACT	1 cut(s)	943
Zsp2I	ATGCAT	1 cut(s)	1014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.