Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006113

Physical Location & Seq

Genomic Coordinates Reverse (-)

4732676 .. 4735045

Gene Structure 2370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G043100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCGGCCATTGCTCCACCTTCTTCCGCCTCAAAACCCTCTCCTTTCCCTGTTTCTTCCAAATCCTCAAACCCCATTTCCAGATTCACCCTCCCCTTCTCTCCTCATCCCCAAAAACCCACTTTCCTCCGCCACCTCCAAATCTCCAACTCTCTCTCCTCCAAGACCGCCACCACCACCATCACCACCACTAACCCTCCAGACCCAGAAACCAAAATTTCCCGATTTGCCCCTGACGAGCCCAGAAAAGGCGCCGACGTCCTCGTTGAGGCGCTCGAGCGGCAAGGCGTGACCAATGTATTCGCCTACCCTGGCGGCGCGTCCATGGAGATCCACCAAGCACTCACGCGCTCCTCCACCATCCGCAACGTCCTCCCGCGCCACGAACAAGGCGGCGTGTTTGCGGCAGAGGGCTACGCGCGTGCGTCGGGACGTCCCGGCGTGTGCATTGCAACCTCCGGGCCGGGCGCAACAAACTTGGTCAGCGGCCTCGCCGACGCGCTCATGGACAGCATTCCGGTGGTGGCAATCACCGGCCAAGTTCCCCGAAGAATGATCGGTACGGACGCGTTCCAGGAGACCCCAATTGTTGAGGTAACAAGATCAATCACCAAGCACAATTATCTTGTTCTTGATGTAGAGGACATTCCTAGGGTTGTTAGTGAGGCCTTTTTCTTAGCTACCTCGGGTCGACCCGGCCCCGTGTTGATTGATATACCCAAAGATGTGCAACAACAGCTTGTGGTTCCCAATTGGGATCAACCCATTAGGTTACCTGGGTATATGTCTAGGTTGCCCAAGACCCCCAGTGAGGATCATTTGGAGCAGATTGTGAGGTTGGTGTCTGAGTCCAAGAGACCAGTGTTGTATGTTGGTGGCGGGTGTTTGAACTCCAGTGAGGAGTTAAGGCGGTTCGTGGAGCTTACTGGGATCCCGGTTGCCAGTACTTTGATGGGTCTCGGGGCATACCCGTGCAACGATGAAGAATTGTCACTCCAAATGCTTGGAATGCATGGGACTGTTTATGCTAATTATGCTGTGGATAAGTCTGATTTATTGCTCGCATTTGGGGTGAGGTTTGATGACCGAGTTACTGGGAAGTTAGAGGCCTTTGCTAGTCGGGCTAAGATTGTCCACATTGATATTGATTCGGCAGAGATTGGAAAGAACAAGCAGCCGCATGTGTCGGTTTGTGCTGATATCAAATTGGCGTTGGAAGGATTGAATAGGATATTGGAGGGGAAAGAGAGCAACGTCCAACTTGATTTTTCGGCTTGGAGGGCAGAGTTGAAAGAGCAGAAAGTGAAGTTTCCATTGGGTTTCAAGACTTTTGGAGAATCCATTTCTCCCCAGAATGCCATTCAGGTTCTTGATGAGTTAACTGATGGGAATGCTATTATAAGCACTGGTGTTGGGCAGCACCAAATGTGGGCAGCTCAGTTTTACAAGTATAAGAGGCCTCGCCAATGGTTGACATCTGGGGGATTAGGAGCTATGGGTTTTGGATTGCCTGCTGCTATTGGGGCTGCTGTTGCAAACCCGGATTCTATCGTTGTTGATATTGATGGTGATGGAAGTTTCATTATGAATGTCCAGGAATTGGCCACCATCAGTGTGGAGAAACTTCCCATTAAGATTTTGCTGTTGAATAATCAACATTTGGGTATGGTTGTGCAATGGGAGGATCGCTTCTATAAGGCTAACAGGGCTCACACTTACTTAGGGAACCCATCAAATGAATCTGAGATATTCCCGAATATGCTGCAGTTTGCAGATGCTTGTGGGATACCGGCTGCCCGTGTGACGAAGAAGCAAGATCTTAAAGCAGCAATTCAGAAAATGTTGGACACACCTGGTCCGTACTTGTTGGATGTAATCGTACCCCATCAAGAGCATGTCCTGCCTATGATTCCAAGCGGCGGTGCCTTCAAAGACGTGATAACTGAGGGTGATGGGAGATCAAGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003984 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006573 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009099 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016740 GO:0016744 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

657

Amino Acids

71.17

Weight (kDa)

6.2

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48560
fragaria_vesca	FvH4_7g06770
malus_domestica	MD06G1028700.v1.1 MD10G1013700.v1.1
prunus_persica	Prupe.5G043100_v2.0.a1 Prupe.8G001300_v2.0.a1 Prupe.8G001300_v2.0.a1
pyrus_communis	pycom06g02280 pycom10g00840
rosa_chinensis	RchiOBHm_Chr7g0208791
rosa_laevigata	RLG00000003195 RLG00000015583
rosa_multiflora	Rmu_co8493263.1_g000001 Rmu_sc0000278.1_g000002 Rmu_sc0008663.1_g000001 Rmu_sc0018750.1_g000002
rosa_roxburghii	Rroxscaffold_3G00250260 Rroxscaffold_7G00217760
rosa_rugosa	Rorug05G0492000 Rorug07G0105800
rosa_samantha	Rh6AG001800 Rh7AG241000 Rh7BG235900 Rh7CG255600 Rh7DG247000
rosa_wichuraiana	Rw6G000240 Rw7G020440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1400
AatII	GACGTC	2 cut(s)	261, 436
AccB1I	GGYRCC	2 cut(s)	251, 1922
AccB7I	CCANNNNNTGG	1 cut(s)	1600
AccBSI	CCGCTC	1 cut(s)	280
AccI	GTMKAC	1 cut(s)	691
AccII	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
AclWI	GGATC	6 cut(s)	325, 765, 822, 925, 938, 1692
AcoI	YGGCCR	3 cut(s)	6, 535, 1602
AcsI	RAATTY	1 cut(s)	216
AcyI	GRCGYC	3 cut(s)	252, 258, 433
AfaI	GTAC	4 cut(s)	562, 946, 1862, 1881
AfiI	CCNNNNNNNGG	6 cut(s)	248, 268, 811, 1429, 1600, 1919
AflIII	ACRYGT	1 cut(s)	567
AgsI	TTSAA	6 cut(s)	889, 1225, 1291, 1324, 1648, 1930
AjiI	CACGTC	1 cut(s)	1936
AjnI	CCWGG	5 cut(s)	310, 573, 775, 1593, 1852
AjuI	GAANNNNNNNTTGG	4 cut(s)	1217, 1249, 1298, 1330
AluBI	AGCT	5 cut(s)	680, 739, 922, 1436, 1493
AluI	AGCT	5 cut(s)	680, 739, 922, 1436, 1493
Alw26I	GTCTC	3 cut(s)	572, 850, 962
AlwI	GGATC	6 cut(s)	325, 765, 822, 925, 938, 1692
Ama87I	CYCGRG	3 cut(s)	275, 685, 959
AoxI	GGCC	9 cut(s)	6, 461, 487, 535, 666, 697, 1107, 1457, 1602
ApeKI	GCWGC	8 cut(s)	1174, 1417, 1433, 1514, 1526, 1762, 1793, 1826
ApoI	RAATTY	1 cut(s)	216
AspA2I	CCTAGG	1 cut(s)	650
AspLEI	GCGC	8 cut(s)	254, 274, 320, 351, 381, 421, 470, 502
AspS9I	GGNCC	3 cut(s)	461, 698, 1856
AsuC2I	CCSGG	6 cut(s)	438, 460, 465, 696, 935, 1541
AsuHPI	GGTGA	7 cut(s)	79, 175, 523, 601, 1084, 1580, 1961
AvaI	CYCGRG	3 cut(s)	275, 685, 959
AvaII	GGWCC	1 cut(s)	1856
AvrII	CCTAGG	1 cut(s)	650
BalI	TGGCCA	1 cut(s)	1604
BamHI	GGATCC	1 cut(s)	930
BanI	GGYRCC	2 cut(s)	251, 1922
BanII	GRGCYC	2 cut(s)	243, 1711
BbvI	GCAGC	8 cut(s)	1186, 1429, 1445, 1501, 1513, 1749, 1780, 1838
BcgI	CGANNNNNNTGC	2 cut(s)	1744, 1778
BciT130I	CCWGG	5 cut(s)	312, 575, 777, 1595, 1854
BciVI	GTATCC	1 cut(s)	1779
BcnI	CCSGG	6 cut(s)	438, 460, 465, 696, 935, 1541
BcoDI	GTCTC	3 cut(s)	572, 850, 962
BfaI	CTAG	3 cut(s)	651, 789, 1116
BfmI	CTRYAG	1 cut(s)	1763
BfoI	RGCGCY	2 cut(s)	255, 275
BfuI	GTATCC	1 cut(s)	1779
BglII	AGATCT	1 cut(s)	1816
BlnI	CCTAGG	1 cut(s)	650
BmcAI	AGTACT	1 cut(s)	946
Bme18I	GGWCC	1 cut(s)	1856
BmeT110I	CYCGRG	3 cut(s)	275, 685, 959
BmgBI	CACGTC	1 cut(s)	1936
BmgT120I	GGNCC	3 cut(s)	461, 698, 1856
BmiI	GGNNCC	6 cut(s)	253, 700, 747, 932, 1727, 1924
BmrI	ACTGGG	3 cut(s)	801, 936, 1104
BmsI	GCATC	1 cut(s)	1765
BmuI	ACTGGG	3 cut(s)	801, 936, 1104
BpmI	CTGGAG	2 cut(s)	183, 877
BpuMI	CCSGG	6 cut(s)	438, 460, 465, 696, 935, 1541
BsaHI	GRCGYC	3 cut(s)	252, 258, 433
BsaI	GGTCTC	3 cut(s)	572, 850, 962
BsaJI	CCNNGG	5 cut(s)	310, 324, 650, 684, 776
BsaWI	WCCGGW	1 cut(s)	517
BsaXI	ACNNNNNCTCC	5 cut(s)	140, 170, 181, 211, 1948
Bsc4I	CCNNNNNNNGG	6 cut(s)	248, 268, 811, 1429, 1600, 1919
Bse118I	RCCGGY	2 cut(s)	533, 1789
Bse1I	ACTGG	7 cut(s)	807, 860, 894, 931, 942, 1099, 1411
Bse3DI	GCAATG	3 cut(s)	9, 447, 1682
BseBI	CCWGG	5 cut(s)	312, 575, 777, 1595, 1854
BseDI	CCNNGG	5 cut(s)	310, 324, 650, 684, 776
BseGI	GGATG	3 cut(s)	106, 360, 1876
BseLI	CCNNNNNNNGG	6 cut(s)	248, 268, 811, 1429, 1600, 1919
BseMI	GCAATG	3 cut(s)	9, 447, 1682
BseMII	CTCAG	4 cut(s)	837, 1451, 1734, 1935
BseNI	ACTGG	7 cut(s)	807, 860, 894, 931, 942, 1099, 1411
BseRI	GAGGAG	4 cut(s)	93, 148, 343, 914
BseXI	GCAGC	8 cut(s)	1186, 1429, 1445, 1501, 1513, 1749, 1780, 1838
Bsh1236I	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
BshFI	GGCC	9 cut(s)	8, 463, 489, 537, 668, 699, 1109, 1459, 1604
BshNI	GGYRCC	2 cut(s)	251, 1922
BsiHKCI	CYCGRG	3 cut(s)	275, 685, 959
BsiSI	CCGG	9 cut(s)	438, 459, 464, 518, 534, 696, 935, 1541, 1790
BslFI	GGGAC	3 cut(s)	420, 444, 1030
BslI	CCNNNNNNNGG	6 cut(s)	248, 268, 811, 1429, 1600, 1919
BsmAI	GTCTC	3 cut(s)	572, 850, 962
BsmFI	GGGAC	3 cut(s)	420, 444, 1030
BsmI	GAATGC	4 cut(s)	513, 1014, 1360, 1396
BsnI	GGCC	9 cut(s)	8, 463, 489, 537, 668, 699, 1109, 1459, 1604
Bso31I	GGTCTC	3 cut(s)	572, 850, 962
BsoBI	CYCGRG	3 cut(s)	275, 685, 959
Bsp1286I	GDGCHC	2 cut(s)	243, 1711
Bsp143I	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
Bsp19I	CCATGG	1 cut(s)	324
BspANI	GGCC	9 cut(s)	8, 463, 489, 537, 668, 699, 1109, 1459, 1604
BspCNI	CTCAG	4 cut(s)	838, 1450, 1735, 1936
BspFNI	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
BspLI	GGNNCC	6 cut(s)	253, 700, 747, 932, 1727, 1924
BspMAI	CTGCAG	1 cut(s)	1767
BspPI	GGATC	6 cut(s)	325, 765, 822, 925, 938, 1692
BspT107I	GGYRCC	2 cut(s)	251, 1922
BspTNI	GGTCTC	3 cut(s)	572, 850, 962
BsrBI	CCGCTC	1 cut(s)	280
BsrDI	GCAATG	3 cut(s)	9, 447, 1682
BsrFI	RCCGGY	2 cut(s)	533, 1789
BsrI	ACTGG	7 cut(s)	807, 860, 894, 931, 942, 1099, 1411
BssAI	RCCGGY	2 cut(s)	533, 1789
BssECI	CCNNGG	5 cut(s)	310, 324, 650, 684, 776
BssMI	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
BssNI	GRCGYC	3 cut(s)	252, 258, 433
BssT1I	CCWWGG	2 cut(s)	324, 650
Bst2UI	CCWGG	5 cut(s)	312, 575, 777, 1595, 1854
Bst4CI	ACNGT	1 cut(s)	1021
BstACI	GRCGYC	3 cut(s)	252, 258, 433
BstAPI	GCANNNNNTGC	1 cut(s)	1900
BstC8I	GCNNGC	3 cut(s)	423, 1062, 1512
BstDEI	CTNAG	7 cut(s)	676, 846, 1125, 1437, 1720, 1743, 1944
BstDSI	CCRYGG	1 cut(s)	324
BstEII	GGTNACC	1 cut(s)	771
BstENI	CCTNNNNNAGG	1 cut(s)	266
BstF5I	GGATG	3 cut(s)	106, 360, 1876
BstFNI	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
BstH2I	RGCGCY	2 cut(s)	255, 275
BstHHI	GCGC	8 cut(s)	254, 274, 320, 351, 381, 421, 470, 502
BstKTI	GATC	9 cut(s)	333, 558, 605, 760, 817, 933, 1687, 1819, 1961
BstMAI	GTCTC	3 cut(s)	572, 850, 962
BstMBI	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
BstNI	CCWGG	5 cut(s)	312, 575, 777, 1595, 1854
BstNSI	RCATGY	2 cut(s)	1184, 1898
BstPI	GGTNACC	1 cut(s)	771
BstSFI	CTRYAG	1 cut(s)	1763
BstUI	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
BstV1I	GCAGC	8 cut(s)	1186, 1429, 1445, 1501, 1513, 1749, 1780, 1838
BstX2I	RGATCY	3 cut(s)	330, 930, 1816
BstXI	CCANNNNNNTGG	2 cut(s)	1004, 1615
BstYI	RGATCY	3 cut(s)	330, 930, 1816
BsuI	GTATCC	1 cut(s)	1779
BsuRI	GGCC	9 cut(s)	8, 463, 489, 537, 668, 699, 1109, 1459, 1604
BtgI	CCRYGG	1 cut(s)	324
BtrI	CACGTC	1 cut(s)	1936
BtsCI	GGATG	3 cut(s)	106, 360, 1876
BtsIMutI	CAGTG	5 cut(s)	814, 867, 901, 1404, 1618
Cac8I	GCNNGC	3 cut(s)	423, 1062, 1512
CfoI	GCGC	8 cut(s)	254, 274, 320, 351, 381, 421, 470, 502
Cfr10I	RCCGGY	2 cut(s)	533, 1789
Cfr13I	GGNCC	3 cut(s)	461, 698, 1856
CseI	GACGC	4 cut(s)	309, 414, 506, 575
CsiI	ACCWGGT	1 cut(s)	1852
Csp6I	GTAC	4 cut(s)	561, 945, 1861, 1880
CviAII	CATG	5 cut(s)	325, 505, 1013, 1181, 1895
CviQI	GTAC	4 cut(s)	561, 945, 1861, 1880
DdeI	CTNAG	7 cut(s)	676, 846, 1125, 1437, 1720, 1743, 1944
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	9 cut(s)	332, 557, 604, 759, 816, 932, 1686, 1818, 1960
DpnII	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
EaeI	YGGCCR	3 cut(s)	6, 535, 1602
EciI	GGCGGA	2 cut(s)	16, 119
Eco130I	CCWWGG	2 cut(s)	324, 650
Eco147I	AGGCCT	3 cut(s)	668, 1109, 1459
Eco24I	GRGCYC	2 cut(s)	243, 1711
Eco31I	GGTCTC	3 cut(s)	572, 850, 962
Eco32I	GATATC	1 cut(s)	1201
Eco47I	GGWCC	1 cut(s)	1856
Eco88I	CYCGRG	3 cut(s)	275, 685, 959
Eco91I	GGTNACC	1 cut(s)	771
EcoNI	CCTNNNNNAGG	1 cut(s)	266
EcoO65I	GGTNACC	1 cut(s)	771
EcoRII	CCWGG	5 cut(s)	310, 573, 775, 1593, 1852
EcoRV	GATATC	1 cut(s)	1201
EcoT14I	CCWWGG	2 cut(s)	324, 650
EcoT22I	ATGCAT	1 cut(s)	1014
EcoT38I	GRGCYC	2 cut(s)	243, 1711
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	2 cut(s)	324, 650
FaeI	CATG	5 cut(s)	328, 508, 1016, 1184, 1898
FaqI	GGGAC	3 cut(s)	420, 444, 1030
FatI	CATG	5 cut(s)	324, 504, 1012, 1180, 1894
FauI	CCCGC	2 cut(s)	384, 872
FblI	GTMKAC	1 cut(s)	691
FokI	GGATG	3 cut(s)	93, 347, 1883
FriOI	GRGCYC	2 cut(s)	243, 1711
FspBI	CTAG	3 cut(s)	651, 789, 1116
GlaI	GCGC	8 cut(s)	253, 273, 319, 350, 380, 420, 469, 501
GsuI	CTGGAG	2 cut(s)	183, 877
HaeII	RGCGCY	2 cut(s)	255, 275
HaeIII	GGCC	9 cut(s)	8, 463, 489, 537, 668, 699, 1109, 1459, 1604
HapII	CCGG	9 cut(s)	438, 459, 464, 518, 534, 696, 935, 1541, 1790
HgaI	GACGC	4 cut(s)	309, 414, 506, 575
HhaI	GCGC	8 cut(s)	254, 274, 320, 351, 381, 421, 470, 502
Hin1I	GRCGYC	3 cut(s)	252, 258, 433
Hin1II	CATG	5 cut(s)	328, 508, 1016, 1184, 1898
Hin6I	GCGC	8 cut(s)	252, 272, 318, 349, 379, 419, 468, 500
HinP1I	GCGC	8 cut(s)	252, 272, 318, 349, 379, 419, 468, 500
HincII	GTYRAC	3 cut(s)	692, 1380, 1473
HindII	GTYRAC	3 cut(s)	692, 1380, 1473
HinfI	GANTC	7 cut(s)	84, 848, 1148, 1337, 1544, 1739, 1909
HpaI	GTTAAC	1 cut(s)	1380
HpaII	CCGG	9 cut(s)	438, 459, 464, 518, 534, 696, 935, 1541, 1790
HphI	GGTGA	7 cut(s)	79, 175, 523, 601, 1084, 1580, 1961
Hpy166II	GTNNAC	4 cut(s)	692, 1135, 1380, 1473
Hpy188I	TCNGA	4 cut(s)	847, 1051, 1744, 1836
Hpy188III	TCNNGA	9 cut(s)	81, 200, 222, 429, 632, 1324, 1370, 1753, 1889
Hpy8I	GTNNAC	4 cut(s)	692, 1135, 1380, 1473
Hpy99I	CGWCG	3 cut(s)	260, 430, 500
HpyAV	CCTTC	4 cut(s)	30, 106, 1211, 1936
HpyCH4III	ACNGT	1 cut(s)	1021
HpyCH4IV	ACGT	5 cut(s)	258, 369, 433, 1254, 1935
HpyCH4V	TGCA	9 cut(s)	447, 452, 730, 975, 1012, 1535, 1675, 1765, 1772
HpyF3I	CTNAG	7 cut(s)	676, 846, 1125, 1437, 1720, 1743, 1944
HpySE526I	ACGT	5 cut(s)	258, 369, 433, 1254, 1935
Hsp92I	GRCGYC	3 cut(s)	252, 258, 433
Hsp92II	CATG	5 cut(s)	328, 508, 1016, 1184, 1898
HspAI	GCGC	8 cut(s)	252, 272, 318, 349, 379, 419, 468, 500
KasI	GGCGCC	1 cut(s)	251
KspAI	GTTAAC	1 cut(s)	1380
Kzo9I	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
LmnI	GCTCC	5 cut(s)	19, 356, 823, 919, 1490
Lsp1109I	GCAGC	8 cut(s)	1186, 1429, 1445, 1501, 1513, 1749, 1780, 1838
LweI	GCATC	1 cut(s)	1765
MabI	ACCWGGT	1 cut(s)	1852
MaeI	CTAG	3 cut(s)	651, 789, 1116
MaeII	ACGT	5 cut(s)	258, 369, 433, 1254, 1935
MaeIII	GTNAC	6 cut(s)	289, 595, 771, 990, 1090, 1801
MalI	GATC	9 cut(s)	332, 557, 604, 759, 816, 932, 1686, 1818, 1960
MbiI	CCGCTC	1 cut(s)	280
MboI	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
MboII	GAAGA	5 cut(s)	15, 48, 561, 995, 1819
MfeI	CAATTG	2 cut(s)	585, 751
MflI	RGATCY	3 cut(s)	330, 930, 1816
MhlI	GDGCHC	2 cut(s)	243, 1711
MlsI	TGGCCA	1 cut(s)	1604
MluCI	AATT	9 cut(s)	216, 585, 619, 751, 986, 1030, 1205, 1598, 1830
MluI	ACGCGT	1 cut(s)	567
MluNI	TGGCCA	1 cut(s)	1604
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	1 cut(s)	857
MmeI	TCCRAC	5 cut(s)	171, 1194, 1282, 1824, 1848
Mox20I	TGGCCA	1 cut(s)	1604
Mph1103I	ATGCAT	1 cut(s)	1014
MscI	TGGCCA	1 cut(s)	1604
MseI	TTAA	4 cut(s)	905, 1379, 1632, 1821
MslI	CAYNNNNRTG	3 cut(s)	518, 970, 1613
Msp20I	TGGCCA	1 cut(s)	1604
MspA1I	CMGCKG	1 cut(s)	486
MspI	CCGG	9 cut(s)	438, 459, 464, 518, 534, 696, 935, 1541, 1790
MunI	CAATTG	2 cut(s)	585, 751
Mva1269I	GAATGC	4 cut(s)	513, 1014, 1360, 1396
MvaI	CCWGG	5 cut(s)	312, 575, 777, 1595, 1854
MvnI	CGCG	7 cut(s)	320, 349, 379, 419, 421, 500, 569
NarI	GGCGCC	1 cut(s)	252
NciI	CCSGG	6 cut(s)	438, 460, 465, 696, 935, 1541
NcoI	CCATGG	1 cut(s)	324
NdeII	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
NlaIII	CATG	5 cut(s)	328, 508, 1016, 1184, 1898
NlaIV	GGNNCC	6 cut(s)	253, 700, 747, 932, 1727, 1924
NmuCI	GTSAC	3 cut(s)	289, 990, 1801
NsiI	ATGCAT	1 cut(s)	1014
NspI	RCATGY	2 cut(s)	1184, 1898
PaeR7I	CTCGAG	1 cut(s)	275
PceI	AGGCCT	3 cut(s)	668, 1109, 1459
PctI	GAATGC	4 cut(s)	513, 1014, 1360, 1396
PfeI	GAWTC	6 cut(s)	84, 1148, 1337, 1544, 1739, 1909
PflMI	CCANNNNNTGG	1 cut(s)	1600
PfoI	TCCNGGA	2 cut(s)	573, 1593
PleI	GAGTC	1 cut(s)	856
PluTI	GGCGCC	1 cut(s)	255
PpsI	GAGTC	1 cut(s)	856
PsiI	TTATAA	1 cut(s)	1400
Psp6I	CCWGG	5 cut(s)	310, 573, 775, 1593, 1852
PspEI	GGTNACC	1 cut(s)	771
PspGI	CCWGG	5 cut(s)	310, 573, 775, 1593, 1852
PspN4I	GGNNCC	6 cut(s)	253, 700, 747, 932, 1727, 1924
PspPI	GGNCC	3 cut(s)	461, 698, 1856
PspXI	VCTCGAGB	1 cut(s)	275
PstI	CTGCAG	1 cut(s)	1767
PsuI	RGATCY	3 cut(s)	330, 930, 1816
RsaI	GTAC	4 cut(s)	562, 946, 1862, 1881
RsaNI	GTAC	4 cut(s)	561, 945, 1861, 1880
RseI	CAYNNNNRTG	3 cut(s)	518, 970, 1613
SalI	GTCGAC	1 cut(s)	690
SaqAI	TTAA	4 cut(s)	905, 1379, 1632, 1821
Sau3AI	GATC	9 cut(s)	330, 555, 602, 757, 814, 930, 1684, 1816, 1958
Sau96I	GGNCC	3 cut(s)	461, 698, 1856
ScaI	AGTACT	1 cut(s)	946
SchI	GAGTC	1 cut(s)	857
SduI	GDGCHC	2 cut(s)	243, 1711
SexAI	ACCWGGT	1 cut(s)	1852
SfaNI	GCATC	1 cut(s)	1765
SfcI	CTRYAG	1 cut(s)	1763
SfoI	GGCGCC	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	275
SinI	GGWCC	1 cut(s)	1856
SlaI	CTCGAG	1 cut(s)	275
SmiMI	CAYNNNNRTG	3 cut(s)	518, 970, 1613
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
Sse9I	AATT	9 cut(s)	216, 585, 619, 751, 986, 1030, 1205, 1598, 1830
SseBI	AGGCCT	3 cut(s)	668, 1109, 1459
SspDI	GGCGCC	1 cut(s)	251
SspMI	CTAG	3 cut(s)	651, 789, 1116
StuI	AGGCCT	3 cut(s)	668, 1109, 1459
StyI	CCWWGG	2 cut(s)	324, 650
TaaI	ACNGT	1 cut(s)	1021
TaiI	ACGT	5 cut(s)	261, 372, 436, 1257, 1938
TaqI	TCGA	2 cut(s)	276, 691
TaqII	GACCGA	1 cut(s)	1101
TasI	AATT	9 cut(s)	216, 585, 619, 751, 986, 1030, 1205, 1598, 1830
TatI	WGTACW	1 cut(s)	944
TauI	GCSGC	8 cut(s)	8, 283, 318, 396, 407, 489, 1180, 1920
TfiI	GAWTC	6 cut(s)	84, 1148, 1337, 1544, 1739, 1909
Tru1I	TTAA	4 cut(s)	905, 1379, 1632, 1821
Tru9I	TTAA	4 cut(s)	905, 1379, 1632, 1821
TscAI	CASTG	5 cut(s)	814, 867, 901, 1411, 1618
TseFI	GTSAC	3 cut(s)	289, 990, 1801
TseI	GCWGC	8 cut(s)	1174, 1417, 1433, 1514, 1526, 1762, 1793, 1826
Tsp45I	GTSAC	3 cut(s)	289, 990, 1801
TspDTI	ATGAA	4 cut(s)	996, 1570, 1601, 1752
TspGWI	ACGGA	2 cut(s)	578, 1848
TspRI	CASTG	5 cut(s)	814, 867, 901, 1411, 1618
Van91I	CCANNNNNTGG	1 cut(s)	1600
VpaK11BI	GGWCC	1 cut(s)	1856
XagI	CCTNNNNNAGG	1 cut(s)	266
XapI	RAATTY	1 cut(s)	216
XceI	RCATGY	2 cut(s)	1184, 1898
XcmI	CCANNNNNNNNNTGG	2 cut(s)	949, 1612
XhoI	CTCGAG	1 cut(s)	275
XmaJI	CCTAGG	1 cut(s)	650
XmiI	GTMKAC	1 cut(s)	691
XspI	CTAG	3 cut(s)	651, 789, 1116
ZraI	GACGTC	2 cut(s)	259, 434
ZrmI	AGTACT	1 cut(s)	946
Zsp2I	ATGCAT	1 cut(s)	1014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.