Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0018750.1

Orthogroup ID

OG0006113

Physical Location & Seq

Genomic Coordinates Forward (+)

2635 .. 4575

Gene Structure 1941 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0018750.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

atggcggccattgctccactctcttcctccttgtcgaaatcgaaaccctcggctttcccttcttcctcaacaaatgccatttccagatgtactttccgccccttcccgcccattacccaccgacctctgcacatttctagttccctccctcctaaagccgcgactgccccttcggactcacaaagtttcacttcccgatttgcccctgacgagcccagaaaaggctccgatgtcctggtggaggccctcgaacgccaaggcgtcaccgacgtattcgcctaccccggaggcgcatccatggagatccatcaggccctcacgcgctcctccaccatccgcaatgttctcccccgccacgagcaaggtggcatcttcgctgctgagggctacgcgcgcgcctcgggccttcccggcgtctgtatcgcaacctcgggccctggcgctaccaacttagtcagtggccttgctgacgcactccttgacagcgttccggtcgtcgctatcaccggacaagtcccccgccggatgatcggcaccgacgcttttcaagagaccccaattgtagaggtaaccaggtccattacaaagcataactatcttgttcttgatgttgaagaaattcctagaattgttagtgaggcatttttcttggccacctccggccgccccggcccagttttgatagatataccaaaagacatacagcaacagcttgttgttccggattggaatcaacccattagattagcggggtacctgtctaggctgcccaatcctcccaatgaggcccatttggagcagattgtaaggttggtttccgaatccaagaagcctgtgttgtatgttggtggagggtgcttgaactcgagtgaggaattgaggcgatttgtggagtttactgggatccctgtcgcgactaccttgatgggtctcggggcatatcctagctcagatgagctgtcactccaaatgttgggaatgcatgggacagtgcatgctaattatgcagtggataagtctgacttgttgcttgcatttggggttaggtttgatgaccgggttacagggaagctcgaagcttttgctagccgagctaagattgttcacattgatattgattctgcagagattggaaagaataagcagcctcatgtatctgtttgtgcagatgtgagattggcattgggagggataaacagggtattggagggaaaaggatacaagttcaaacttgatttctcagcctggagggaggagctgaaagagcagaaaattagttatccattaaattataagacatttggtgacgccattcctcctcagtgtgctattcaggttcttgatgaattaactgatgggaatgcaatcataagcaccggtgtcgggcagcatcaaatgtgggcagctcaattttacaaatataagaggcctagacagtggttgacatcaggaggtttaggagctatgggttttggattgcctgctgctattggggcagctgtggcaaatccagatgccattgttgttgatattgatggtgatggaagcttcatgatgaatgttcaggaattagcaactatcagggtggaaaatcttcccattaagataatgctgttgaataatcagcatttgggtatggttgttcaatgggaggatcgcttctataaggcgaatagggctcacacttatttagggaacccattaaatgagtctgagatattccctaatatgctcaagttcgcagaagcttgtgggataccagctgcccgtgtgacaaagaaggaacatcttaaagaggcaattcagaaaatgttggacactcctggtccgtacttgttggatgtagtagtacctcatcaagagcatgtcttgcccatgattccgagtggtggtgcttttaaagatgtgataactgagggtgatggaagatcttcttattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003984 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006573 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009099 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016740 GO:0016744 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

TPP_enzyme_C TPP_enzyme_M TPP_enzyme_N

Protein Analysis

646

Amino Acids

70.08

Weight (kDa)

6.37

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48560
fragaria_vesca	FvH4_7g06770
malus_domestica	MD06G1028700.v1.1 MD10G1013700.v1.1
prunus_persica	Prupe.5G043100_v2.0.a1 Prupe.8G001300_v2.0.a1 Prupe.8G001300_v2.0.a1
pyrus_communis	pycom06g02280 pycom10g00840
rosa_chinensis	RchiOBHm_Chr7g0208791
rosa_laevigata	RLG00000003195 RLG00000015583
rosa_multiflora	Rmu_co8493263.1_g000001 Rmu_sc0000278.1_g000002 Rmu_sc0008663.1_g000001 Rmu_sc0018750.1_g000002
rosa_roxburghii	Rroxscaffold_3G00250260 Rroxscaffold_7G00217760
rosa_rugosa	Rorug05G0492000 Rorug07G0105800
rosa_samantha	Rh6AG001800 Rh7AG241000 Rh7BG235900 Rh7CG255600 Rh7DG247000
rosa_wichuraiana	Rw6G000240 Rw7G020440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1293
Acc65I	GGTACC	1 cut(s)	753
AccB1I	GGYRCC	2 cut(s)	533, 753
AccB7I	CCANNNNNTGG	1 cut(s)	973
AccII	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
AccIII	TCCGGA	1 cut(s)	721
AciI	CCGC	9 cut(s)	5, 97, 107, 159, 337, 352, 520, 664, 749
AclWI	GGATC	4 cut(s)	298, 898, 911, 1662
AcoI	YGGCCR	3 cut(s)	6, 651, 661
AcsI	RAATTY	1 cut(s)	618
AcyI	GRCGYC	3 cut(s)	261, 414, 1308
AfaI	GTAC	4 cut(s)	91, 755, 1832, 1851
AfiI	CCNNNNNNNGG	5 cut(s)	221, 241, 973, 1383, 1889
AgeI	ACCGGT	1 cut(s)	1376
AgsI	TTSAA	6 cut(s)	548, 614, 862, 1228, 1618, 1646
AjnI	CCWGG	5 cut(s)	234, 436, 572, 1244, 1822
Alw26I	GTCTC	2 cut(s)	545, 935
AlwI	GGATC	4 cut(s)	298, 898, 911, 1662
Ama87I	CYCGRG	4 cut(s)	400, 430, 865, 932
Aor13HI	TCCGGA	1 cut(s)	721
ApaI	GGGCCC	1 cut(s)	437
ApeKI	GCWGC	8 cut(s)	377, 766, 1144, 1387, 1403, 1484, 1496, 1763
ApoI	RAATTY	1 cut(s)	618
ArsI	GACNNNNNNTTYG	2 cut(s)	154, 186
AsiGI	ACCGGT	1 cut(s)	1376
Asp700I	GAANNNNTTC	3 cut(s)	618, 1593, 1930
Asp718I	GGTACC	1 cut(s)	753
AspLEI	GCGC	6 cut(s)	293, 324, 394, 396, 398, 443
AspS9I	GGNCC	9 cut(s)	244, 313, 403, 433, 434, 576, 671, 787, 1826
AsuC2I	CCSGG	4 cut(s)	285, 411, 669, 1058
AsuHPI	GGTGA	5 cut(s)	256, 496, 1316, 1550, 1931
AsuNHI	GCTAGC	1 cut(s)	1085
AvaI	CYCGRG	4 cut(s)	400, 430, 865, 932
AvaII	GGWCC	2 cut(s)	576, 1826
BaeGI	GKGCMC	1 cut(s)	437
BalI	TGGCCA	1 cut(s)	653
BamHI	GGATCC	1 cut(s)	903
BanI	GGYRCC	2 cut(s)	533, 753
BanII	GRGCYC	3 cut(s)	216, 437, 1681
BauI	CACGAG	1 cut(s)	356
BbvCI	CCTCAGC	1 cut(s)	381
BbvI	GCAGC	8 cut(s)	364, 753, 1156, 1399, 1415, 1471, 1508, 1750
BccI	CCATC	7 cut(s)	315, 341, 919, 1349, 1529, 1535, 1916
BcgI	CGANNNNNNTGC	4 cut(s)	1064, 1098, 1363, 1397
BciT130I	CCWGG	5 cut(s)	236, 438, 574, 1246, 1824
BciVI	GTATCC	2 cut(s)	1211, 1749
BcnI	CCSGG	4 cut(s)	285, 411, 669, 1058
BcoDI	GTCTC	2 cut(s)	545, 935
BfaI	CTAG	6 cut(s)	138, 624, 762, 945, 1086, 1431
BfmI	CTRYAG	1 cut(s)	1122
BfoI	RGCGCY	1 cut(s)	444
BfuI	GTATCC	2 cut(s)	1211, 1749
BglI	GCCNNNNNGGC	2 cut(s)	411, 669
BglII	AGATCT	1 cut(s)	1928
Bme1390I	CCNGG	9 cut(s)	236, 285, 411, 438, 574, 669, 1058, 1246, 1824
Bme18I	GGWCC	2 cut(s)	576, 1826
BmeT110I	CYCGRG	4 cut(s)	400, 430, 865, 932
BmgT120I	GGNCC	9 cut(s)	244, 313, 403, 433, 434, 576, 671, 787, 1826
BmiI	GGNNCC	6 cut(s)	226, 435, 535, 755, 905, 1697
BmrFI	CCNGG	9 cut(s)	236, 285, 411, 438, 574, 669, 1058, 1246, 1824
BmrI	ACTGGG	2 cut(s)	668, 909
BmsI	GCATC	4 cut(s)	302, 378, 1399, 1504
BmtI	GCTAGC	1 cut(s)	1089
BmuI	ACTGGG	2 cut(s)	668, 909
BpmI	CTGGAG	1 cut(s)	1267
Bpu10I	CCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	1 cut(s)	1718
BpuMI	CCSGG	4 cut(s)	285, 411, 669, 1058
BsaBI	GATNNNNATC	1 cut(s)	729
BsaHI	GRCGYC	3 cut(s)	261, 414, 1308
BsaI	GGTCTC	2 cut(s)	545, 935
BsaJI	CCNNGG	8 cut(s)	48, 256, 283, 297, 399, 429, 436, 667
BsaWI	WCCGGW	4 cut(s)	490, 506, 721, 1376
Bsc4I	CCNNNNNNNGG	5 cut(s)	221, 241, 973, 1383, 1889
Bse118I	RCCGGY	1 cut(s)	1376
Bse1I	ACTGG	2 cut(s)	674, 904
Bse3DI	GCAATG	2 cut(s)	9, 346
Bse8I	GATNNNNATC	1 cut(s)	729
BseAI	TCCGGA	1 cut(s)	721
BseBI	CCWGG	5 cut(s)	236, 438, 574, 1246, 1824
BseDI	CCNNGG	8 cut(s)	48, 256, 283, 297, 399, 429, 436, 667
BseGI	GGATG	4 cut(s)	293, 333, 531, 1846
BseJI	GATNNNNATC	1 cut(s)	729
BseLI	CCNNNNNNNGG	5 cut(s)	221, 241, 973, 1383, 1889
BseMI	GCAATG	2 cut(s)	9, 346
BseMII	CTCAG	6 cut(s)	372, 963, 1254, 1334, 1704, 1905
BseNI	ACTGG	2 cut(s)	674, 904
BsePI	GCGCGC	2 cut(s)	392, 394
BseRI	GAGGAG	3 cut(s)	316, 1268, 1308
BseSI	GKGCMC	1 cut(s)	437
BseX3I	CGGCCG	1 cut(s)	661
BseXI	GCAGC	8 cut(s)	364, 753, 1156, 1399, 1415, 1471, 1508, 1750
BsgI	GTGCAG	2 cut(s)	113, 1185
Bsh1236I	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
Bsh1285I	CGRYCG	2 cut(s)	495, 664
BshNI	GGYRCC	2 cut(s)	533, 753
BshTI	ACCGGT	1 cut(s)	1376
BsiEI	CGRYCG	2 cut(s)	495, 664
BsiHKCI	CYCGRG	4 cut(s)	400, 430, 865, 932
BslFI	GGGAC	2 cut(s)	500, 1000
BslI	CCNNNNNNNGG	5 cut(s)	221, 241, 973, 1383, 1889
BsmAI	GTCTC	2 cut(s)	545, 935
BsmFI	GGGAC	2 cut(s)	500, 1000
BsmI	GAATGC	2 cut(s)	984, 1366
Bso31I	GGTCTC	2 cut(s)	545, 935
BsoBI	CYCGRG	4 cut(s)	400, 430, 865, 932
Bsp120I	GGGCCC	1 cut(s)	433
Bsp1286I	GDGCHC	3 cut(s)	216, 437, 1681
Bsp13I	TCCGGA	1 cut(s)	721
Bsp143I	GATC	5 cut(s)	303, 528, 903, 1654, 1928
Bsp19I	CCATGG	1 cut(s)	297
Bsp68I	TCGCGA	1 cut(s)	914
BspACI	CCGC	9 cut(s)	5, 97, 107, 159, 337, 352, 520, 664, 749
BspCNI	CTCAG	6 cut(s)	373, 962, 1253, 1333, 1705, 1906
BspEI	TCCGGA	1 cut(s)	721
BspFNI	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
BspHI	TCATGA	1 cut(s)	1551
BspLI	GGNNCC	6 cut(s)	226, 435, 535, 755, 905, 1697
BspMAI	CTGCAG	1 cut(s)	1126
BspOI	GCTAGC	1 cut(s)	1089
BspPI	GGATC	4 cut(s)	298, 898, 911, 1662
BspT107I	GGYRCC	2 cut(s)	533, 753
BspTNI	GGTCTC	2 cut(s)	545, 935
BsrDI	GCAATG	2 cut(s)	9, 346
BsrFI	RCCGGY	1 cut(s)	1376
BsrI	ACTGG	2 cut(s)	674, 904
BssAI	RCCGGY	1 cut(s)	1376
BssECI	CCNNGG	8 cut(s)	48, 256, 283, 297, 399, 429, 436, 667
BssHII	GCGCGC	2 cut(s)	392, 394
BssMI	GATC	5 cut(s)	303, 528, 903, 1654, 1928
BssNI	GRCGYC	3 cut(s)	261, 414, 1308
BssSI	CACGAG	1 cut(s)	356
BssT1I	CCWWGG	2 cut(s)	256, 297
Bst2BI	CACGAG	1 cut(s)	356
Bst2UI	CCWGG	5 cut(s)	236, 438, 574, 1246, 1824
Bst4CI	ACNGT	2 cut(s)	991, 1437
Bst6I	CTCTTC	1 cut(s)	28
BstACI	GRCGYC	3 cut(s)	261, 414, 1308
BstAPI	GCANNNNNTGC	1 cut(s)	1870
BstC8I	GCNNGC	6 cut(s)	394, 396, 996, 1032, 1087, 1482
BstDEI	CTNAG	8 cut(s)	381, 451, 949, 1095, 1240, 1320, 1713, 1914
BstDSI	CCRYGG	1 cut(s)	297
BstEII	GGTNACC	1 cut(s)	568
BstENI	CCTNNNNNAGG	1 cut(s)	239
BstF5I	GGATG	4 cut(s)	293, 333, 531, 1846
BstFNI	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
BstH2I	RGCGCY	1 cut(s)	444
BstHHI	GCGC	6 cut(s)	293, 324, 394, 396, 398, 443
BstKTI	GATC	5 cut(s)	306, 531, 906, 1657, 1931
BstMAI	GTCTC	2 cut(s)	545, 935
BstMBI	GATC	5 cut(s)	303, 528, 903, 1654, 1928
BstMCI	CGRYCG	2 cut(s)	495, 664
BstNI	CCWGG	5 cut(s)	236, 438, 574, 1246, 1824
BstNSI	RCATGY	2 cut(s)	998, 1868
BstPI	GGTNACC	1 cut(s)	568
BstSCI	CCNGG	9 cut(s)	234, 283, 409, 436, 572, 667, 1056, 1244, 1822
BstSFI	CTRYAG	1 cut(s)	1122
BstSLI	GKGCMC	1 cut(s)	437
BstUI	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
BstV1I	GCAGC	8 cut(s)	364, 753, 1156, 1399, 1415, 1471, 1508, 1750
BstX2I	RGATCY	3 cut(s)	303, 903, 1928
BstYI	RGATCY	3 cut(s)	303, 903, 1928
BstZI	CGGCCG	1 cut(s)	661
BsuI	GTATCC	2 cut(s)	1211, 1749
BtgI	CCRYGG	1 cut(s)	297
BtsCI	GGATG	4 cut(s)	293, 333, 531, 1846
BtsI	GCAGTG	1 cut(s)	1014
BtsIMutI	CAGTG	5 cut(s)	463, 996, 1014, 1328, 1442
BtuMI	TCGCGA	1 cut(s)	914
Cac8I	GCNNGC	6 cut(s)	394, 396, 996, 1032, 1087, 1482
CciI	TCATGA	1 cut(s)	1551
CfoI	GCGC	6 cut(s)	293, 324, 394, 396, 398, 443
Cfr10I	RCCGGY	1 cut(s)	1376
Cfr13I	GGNCC	9 cut(s)	244, 313, 403, 433, 434, 576, 671, 787, 1826
CseI	GACGC	5 cut(s)	250, 403, 479, 548, 1316
CsiI	ACCWGGT	1 cut(s)	572
Csp6I	GTAC	4 cut(s)	90, 754, 1831, 1850
CspAI	ACCGGT	1 cut(s)	1376
CviAII	CATG	7 cut(s)	298, 983, 995, 1151, 1552, 1865, 1876
CviQI	GTAC	4 cut(s)	90, 754, 1831, 1850
DdeI	CTNAG	8 cut(s)	381, 451, 949, 1095, 1240, 1320, 1713, 1914
DpnI	GATC	5 cut(s)	305, 530, 905, 1656, 1930
DpnII	GATC	5 cut(s)	303, 528, 903, 1654, 1928
DraI	TTTAAA	1 cut(s)	1900
EaeI	YGGCCR	3 cut(s)	6, 651, 661
EagI	CGGCCG	1 cut(s)	661
Eam1104I	CTCTTC	1 cut(s)	28
EarI	CTCTTC	1 cut(s)	28
EciI	GGCGGA	1 cut(s)	86
EclXI	CGGCCG	1 cut(s)	661
Eco130I	CCWWGG	2 cut(s)	256, 297
Eco147I	AGGCCT	1 cut(s)	1429
Eco24I	GRGCYC	3 cut(s)	216, 437, 1681
Eco31I	GGTCTC	2 cut(s)	545, 935
Eco47I	GGWCC	2 cut(s)	576, 1826
Eco52I	CGGCCG	1 cut(s)	661
Eco88I	CYCGRG	4 cut(s)	400, 430, 865, 932
Eco91I	GGTNACC	1 cut(s)	568
EcoNI	CCTNNNNNAGG	1 cut(s)	239
EcoO109I	RGGNCCY	3 cut(s)	244, 313, 434
EcoO65I	GGTNACC	1 cut(s)	568
EcoRII	CCWGG	5 cut(s)	234, 436, 572, 1244, 1822
EcoT14I	CCWWGG	2 cut(s)	256, 297
EcoT22I	ATGCAT	1 cut(s)	984
EcoT38I	GRGCYC	3 cut(s)	216, 437, 1681
ErhI	CCWWGG	2 cut(s)	256, 297
FaeI	CATG	7 cut(s)	301, 986, 998, 1154, 1555, 1868, 1879
FalI	AAGNNNNNCTT	5 cut(s)	175, 207, 1007, 1039, 1918
FaqI	GGGAC	2 cut(s)	500, 1000
FatI	CATG	7 cut(s)	297, 982, 994, 1150, 1551, 1864, 1875
FauI	CCCGC	4 cut(s)	114, 359, 527, 742
FokI	GGATG	4 cut(s)	280, 320, 538, 1853
FriOI	GRGCYC	3 cut(s)	216, 437, 1681
FspBI	CTAG	6 cut(s)	138, 624, 762, 945, 1086, 1431
GlaI	GCGC	6 cut(s)	292, 323, 393, 395, 397, 442
GsuI	CTGGAG	1 cut(s)	1267
HaeII	RGCGCY	1 cut(s)	444
HgaI	GACGC	5 cut(s)	250, 403, 479, 548, 1316
HhaI	GCGC	6 cut(s)	293, 324, 394, 396, 398, 443
Hin1I	GRCGYC	3 cut(s)	261, 414, 1308
Hin1II	CATG	7 cut(s)	301, 986, 998, 1154, 1555, 1868, 1879
Hin6I	GCGC	6 cut(s)	291, 322, 392, 394, 396, 441
HinP1I	GCGC	6 cut(s)	291, 322, 392, 394, 396, 441
HincII	GTYRAC	1 cut(s)	1443
HindII	GTYRAC	1 cut(s)	1443
HindIII	AAGCTT	3 cut(s)	1077, 1546, 1746
HinfI	GANTC	6 cut(s)	176, 730, 821, 1118, 1709, 1879
HphI	GGTGA	5 cut(s)	256, 496, 1316, 1550, 1931
Hpy166II	GTNNAC	3 cut(s)	897, 1105, 1443
Hpy188I	TCNGA	8 cut(s)	175, 229, 820, 952, 1021, 1714, 1806, 1884
Hpy8I	GTNNAC	3 cut(s)	897, 1105, 1443
Hpy99I	CGWCG	3 cut(s)	272, 500, 542
HpyAV	CCTTC	5 cut(s)	69, 112, 180, 416, 1774
HpyCH4III	ACNGT	2 cut(s)	991, 1437
HpyCH4IV	ACGT	1 cut(s)	270
HpyCH4V	TGCA	8 cut(s)	130, 982, 994, 1007, 1034, 1124, 1166, 1364
HpyF3I	CTNAG	8 cut(s)	381, 451, 949, 1095, 1240, 1320, 1713, 1914
HpySE526I	ACGT	1 cut(s)	270
Hsp92I	GRCGYC	3 cut(s)	261, 414, 1308
Hsp92II	CATG	7 cut(s)	301, 986, 998, 1154, 1555, 1868, 1879
HspAI	GCGC	6 cut(s)	291, 322, 392, 394, 396, 441
Kpn2I	TCCGGA	1 cut(s)	721
KpnI	GGTACC	1 cut(s)	757
Kzo9I	GATC	5 cut(s)	303, 528, 903, 1654, 1928
LmnI	GCTCC	6 cut(s)	19, 230, 329, 796, 1255, 1460
Lsp1109I	GCAGC	8 cut(s)	364, 753, 1156, 1399, 1415, 1471, 1508, 1750
LweI	GCATC	4 cut(s)	302, 378, 1399, 1504
MabI	ACCWGGT	1 cut(s)	572
MaeI	CTAG	6 cut(s)	138, 624, 762, 945, 1086, 1431
MaeII	ACGT	1 cut(s)	270
MaeIII	GTNAC	6 cut(s)	262, 568, 960, 1060, 1304, 1771
MalI	GATC	5 cut(s)	305, 530, 905, 1656, 1930
MauBI	CGCGCGCG	1 cut(s)	392
MboI	GATC	5 cut(s)	303, 528, 903, 1654, 1928
MboII	GAAGA	7 cut(s)	15, 54, 364, 626, 1586, 1923, 1938
MfeI	CAATTG	1 cut(s)	558
MflI	RGATCY	3 cut(s)	303, 903, 1928
MhlI	GDGCHC	3 cut(s)	216, 437, 1681
MlsI	TGGCCA	1 cut(s)	653
MluNI	TGGCCA	1 cut(s)	653
MlyI	GAGTC	2 cut(s)	170, 1718
MmeI	TCCRAC	2 cut(s)	1794, 1818
Mox20I	TGGCCA	1 cut(s)	653
Mph1103I	ATGCAT	1 cut(s)	984
MroI	TCCGGA	1 cut(s)	721
MroXI	GAANNNNTTC	3 cut(s)	618, 1593, 1930
MscI	TGGCCA	1 cut(s)	653
MseI	TTAA	6 cut(s)	1286, 1349, 1602, 1703, 1791, 1899
Msp20I	TGGCCA	1 cut(s)	653
MspA1I	CMGCKG	2 cut(s)	1499, 1763
MspR9I	CCNGG	9 cut(s)	236, 285, 411, 438, 574, 669, 1058, 1246, 1824
MunI	CAATTG	1 cut(s)	558
Mva1269I	GAATGC	2 cut(s)	984, 1366
MvaI	CCWGG	5 cut(s)	236, 438, 574, 1246, 1824
MvnI	CGCG	6 cut(s)	161, 322, 392, 394, 396, 914
NciI	CCSGG	4 cut(s)	285, 411, 669, 1058
NcoI	CCATGG	1 cut(s)	297
NdeII	GATC	5 cut(s)	303, 528, 903, 1654, 1928
NheI	GCTAGC	1 cut(s)	1085
NlaIII	CATG	7 cut(s)	301, 986, 998, 1154, 1555, 1868, 1879
NlaIV	GGNNCC	6 cut(s)	226, 435, 535, 755, 905, 1697
NmeAIII	GCCGAG	2 cut(s)	29, 1115
NmuCI	GTSAC	4 cut(s)	262, 960, 1304, 1771
NruI	TCGCGA	1 cut(s)	914
NsiI	ATGCAT	1 cut(s)	984
NspI	RCATGY	2 cut(s)	998, 1868
PaeI	GCATGC	1 cut(s)	998
PaeR7I	CTCGAG	1 cut(s)	865
PagI	TCATGA	1 cut(s)	1551
PauI	GCGCGC	2 cut(s)	392, 394
PceI	AGGCCT	1 cut(s)	1429
PctI	GAATGC	2 cut(s)	984, 1366
PdmI	GAANNNNTTC	3 cut(s)	618, 1593, 1930
PfeI	GAWTC	4 cut(s)	730, 821, 1118, 1879
PflMI	CCANNNNNTGG	1 cut(s)	973
PinAI	ACCGGT	1 cut(s)	1376
PleI	GAGTC	2 cut(s)	170, 1717
PpsI	GAGTC	2 cut(s)	170, 1717
PsiI	TTATAA	1 cut(s)	1293
Psp6I	CCWGG	5 cut(s)	234, 436, 572, 1244, 1822
PspEI	GGTNACC	1 cut(s)	568
PspGI	CCWGG	5 cut(s)	234, 436, 572, 1244, 1822
PspN4I	GGNNCC	6 cut(s)	226, 435, 535, 755, 905, 1697
PspOMI	GGGCCC	1 cut(s)	433
PspPI	GGNCC	9 cut(s)	244, 313, 403, 433, 434, 576, 671, 787, 1826
PspXI	VCTCGAGB	1 cut(s)	865
PstI	CTGCAG	1 cut(s)	1126
PsuI	RGATCY	3 cut(s)	303, 903, 1928
PteI	GCGCGC	2 cut(s)	392, 394
PvuII	CAGCTG	2 cut(s)	1499, 1763
RruI	TCGCGA	1 cut(s)	914
RsaI	GTAC	4 cut(s)	91, 755, 1832, 1851
RsaNI	GTAC	4 cut(s)	90, 754, 1831, 1850
SaqAI	TTAA	6 cut(s)	1286, 1349, 1602, 1703, 1791, 1899
Sau3AI	GATC	5 cut(s)	303, 528, 903, 1654, 1928
Sau96I	GGNCC	9 cut(s)	244, 313, 403, 433, 434, 576, 671, 787, 1826
SchI	GAGTC	2 cut(s)	170, 1718
ScrFI	CCNGG	9 cut(s)	236, 285, 411, 438, 574, 669, 1058, 1246, 1824
SduI	GDGCHC	3 cut(s)	216, 437, 1681
SexAI	ACCWGGT	1 cut(s)	572
SfaNI	GCATC	4 cut(s)	302, 378, 1399, 1504
SfcI	CTRYAG	1 cut(s)	1122
SfiI	GGCCNNNNNGGCC	1 cut(s)	669
Sfr274I	CTCGAG	1 cut(s)	865
SgrAI	CRCCGGYG	1 cut(s)	1376
SinI	GGWCC	2 cut(s)	576, 1826
SlaI	CTCGAG	1 cut(s)	865
SmlI	CTYRAG	2 cut(s)	865, 1733
SmoI	CTYRAG	2 cut(s)	865, 1733
SphI	GCATGC	1 cut(s)	998
SseBI	AGGCCT	1 cut(s)	1429
SsiI	CCGC	9 cut(s)	5, 97, 107, 159, 337, 352, 520, 664, 749
SspMI	CTAG	6 cut(s)	138, 624, 762, 945, 1086, 1431
StuI	AGGCCT	1 cut(s)	1429
StyD4I	CCNGG	9 cut(s)	234, 283, 409, 436, 572, 667, 1056, 1244, 1822
StyI	CCWWGG	2 cut(s)	256, 297
TaaI	ACNGT	2 cut(s)	991, 1437
TaiI	ACGT	1 cut(s)	273
TaqI	TCGA	5 cut(s)	35, 41, 249, 866, 1074
TatI	WGTACW	1 cut(s)	89
TauI	GCSGC	3 cut(s)	8, 161, 666
TfiI	GAWTC	4 cut(s)	730, 821, 1118, 1879
Tru1I	TTAA	6 cut(s)	1286, 1349, 1602, 1703, 1791, 1899
Tru9I	TTAA	6 cut(s)	1286, 1349, 1602, 1703, 1791, 1899
TscAI	CASTG	5 cut(s)	463, 996, 1014, 1328, 1442
TseFI	GTSAC	4 cut(s)	262, 960, 1304, 1771
TseI	GCWGC	8 cut(s)	377, 766, 1144, 1387, 1403, 1484, 1496, 1763
Tsp45I	GTSAC	4 cut(s)	262, 960, 1304, 1771
TspDTI	ATGAA	3 cut(s)	1359, 1540, 1571
TspGWI	ACGGA	1 cut(s)	1818
TspRI	CASTG	5 cut(s)	463, 996, 1014, 1328, 1442
Van91I	CCANNNNNTGG	1 cut(s)	973
VpaK11BI	GGWCC	2 cut(s)	576, 1826
XagI	CCTNNNNNAGG	1 cut(s)	239
XapI	RAATTY	1 cut(s)	618
XceI	RCATGY	2 cut(s)	998, 1868
XcmI	CCANNNNNNNNNTGG	1 cut(s)	362
XhoI	CTCGAG	1 cut(s)	865
XmnI	GAANNNNTTC	3 cut(s)	618, 1593, 1930
XspI	CTAG	6 cut(s)	138, 624, 762, 945, 1086, 1431
Zsp2I	ATGCAT	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.