FvH4_7g18270

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0007094
Physical Location & Seq
Forward (+)
15288594 .. 15292403
3810 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18270.t1

Sequence Viewer

Length: 1875 bp
ATGTCGGCTCGATATCTGAAGAAAGTTCTCAAAGAAGAAGAACAACAAGACCGCCAACCGGAATCAGACCACGAAGAAGAAGAAGAAGACGACCACCCCCAGCTCAATGGCAAAGCTAAGGTCAACCCTTTCGACCTTCTCAACGACGACGCCGACGCCGACGACCAGGAGGATGAGCCGGAAAGTGTTGATGAACCTTTGAGTGTGGTGCCTGAGCCGAAGCCAGGTGCTGATGCGGTTTCGACTTCAAGTCAAAAAACCAAGAAGAAGAAGAAGAAGAAAGGCAAAGAGGGCTCTTCTTCTAACTCAGCTGCACCGAAAGTGAAAAAGTCTGGGGATGAGGTAGTGGAAGAGTTTTATGCGCATGCGCATGAGAGACAGGCGGAGATGAGAGCTAGTGATGGTGTGGTTAAGAATTCGTATAAGAAGTGTGTGCCCTTTATATTGCAAGTGGATCCCAAGTACTTGAATGCCGACAATGAGATGCGGAGGATTTTTGGGTCAAAAGTGGTGAAGTCGTTTGAGAAGAATCAACAGAGTGGTAGCTCTAGAATGGCGCGTGGTGGAAGACGTGGCGTGGTTCATAGGAAGTCTTTCCTTGTCACTCCGTTGGATCATTGGCCTCGCTGGGACGGCGCCATGAACATGGTACTCCTTCACTCTCCCAACGGATACTACGATTACAGATATACATATTCGTCAGCCTACCGTCACGCTCAGAGTGCATTTGAATCTGCCAAAGCTATACATGATCTCAATGCCATTGCAAATGTTTTGTTGCACTATCCTTATCATTTAGATTCGCTACTAACCATGGCAGAGTACTTTAAGTTTGTGGGTGAGCATCAAATGTCAGCAGATGCTATCTCTAAGTGCTTGTATGCTTTGGAATGTGCATGGAATCCAATGTTCACCCCCTTTAAGGGTGATTGCCAAGTGAAATACAGTTATGATGAAAACAAGCCTCTGTTCGTTGCACTGTTTACTCACATGAAAAGTATGGACAGACGTGGCTGTCATCGATCTGCTTTAGAAGTTTGCAAGTTTTTACTGTCACTAGATACTGACGATCCAATGGGGGCCATGTTCTGTATTGACTATTTTGCGGTGAGAGCAGAGGAGTATGCATGGCTAGAACGGTTCTCTGAAGAATATAAAAGTGATAACACCCTATGGTTGTTTCCAAATTTTTCGTATTCTCTTGCCGTATGCCGATTGTATCTTGAGAAAGCGGAATCTTCAAAAGATTCAGCTGCGGAAACCACCAAGGCTACTTCAACCGATCTTATGAAGCAGGCATTGATGCTTCATCCCACGGTTCTAAAGAAACTAGTGGCAAAGGTACCTTTGAAAGAACGGGTGTGGACGGATATACTCAAGAATGCATTTTTCCAAGCAGATGAAGTAGGAATCCCATCCTTGGACCACCTGATTAACATATATGTTGAGAGTAATCATATTATATGGAGGCTTCCAGAATTGCAGAAATTGCTGCGGGATGCAGTGCAACTGGTAATTGAGACTCTAAGACAGAATAGCAGCGAAAAGAATGACTGGGCATGTGTGAGAAAAGAAGCATTCTCATCTGATAAGAATGAGTACTCCCACTTGTTGGTATCAGATTTCTCGTATACATTGCCAGCTGCCCCACCTGAAAACTTGCAACATTTTATGGCCAACGCAAGGATGGGAGACGTTATGCATAACGAGCAGGATCTTGTCAATCTAAATGAGGGTGGCCCTGCTCCCCGTGATGTTGCAAATCGAAATCCATTAGCGGTCTTGTTTGAGTCGGTGCTACCGTGGGTTCATTATGGTGTAGAAATTGAGGAGGAAAACCAACAAAATGGCCATGGTCCGGGGAATGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcf25

Protein Analysis

625

Amino Acids

71.15

Weight (kDa)

5.57

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcf25 PF04910 228 - 552 7.5e-71 Transcriptional repressor TCF25
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1014
Acc16I TGCGCA 2 cut(s) 363, 369
Acc65I GGTACC 1 cut(s) 1342
AccB1I GGYRCC 3 cut(s) 208, 635, 1342
AccB7I CCANNNNNTGG 1 cut(s) 1612
AccI GTMKAC 1 cut(s) 1631
AccII CGCG 1 cut(s) 559
AciI CCGC 9 cut(s) 52, 236, 383, 487, 1106, 1232, 1256, 1495, 1778
AclWI GGATC 5 cut(s) 449, 462, 621, 1064, 1722
AcoI YGGCCR 2 cut(s) 1674, 1849
AcsI RAATTY 2 cut(s) 415, 1186
AcuI CTGAAG 2 cut(s) 38, 1167
AcyI GRCGYC 3 cut(s) 150, 156, 636
AfaI GTAC 5 cut(s) 464, 651, 824, 1344, 1601
AfiI CCNNNNNNNGG 8 cut(s) 58, 224, 922, 923, 1420, 1612, 1683, 1858
AgsI TTSAA 6 cut(s) 249, 469, 731, 1242, 1278, 1351
AhdI GACNNNNNGTC 1 cut(s) 249
AhlI ACTAGT 1 cut(s) 1330
AjiI CACGTC 2 cut(s) 572, 1010
AjnI CCWGG 2 cut(s) 165, 223
AluBI AGCT 8 cut(s) 103, 116, 311, 395, 546, 743, 1253, 1643
AluI AGCT 8 cut(s) 103, 116, 311, 395, 546, 743, 1253, 1643
Alw26I GTCTC 3 cut(s) 370, 1514, 1686
AlwI GGATC 5 cut(s) 449, 462, 621, 1064, 1722
AlwNI CAGNNNCTG 1 cut(s) 230
AoxI GGCC 5 cut(s) 620, 1080, 1674, 1738, 1849
ApeKI GCWGC 5 cut(s) 311, 1253, 1492, 1539, 1643
ApoI RAATTY 2 cut(s) 415, 1186
ArsI GACNNNNNNTTYG 2 cut(s) 105, 137
Asp700I GAANNNNTTC 1 cut(s) 593
Asp718I GGTACC 1 cut(s) 1342
AspLEI GCGC 4 cut(s) 364, 370, 559, 638
AspS9I GGNCC 4 cut(s) 1080, 1423, 1739, 1856
AsuC2I CCSGG 1 cut(s) 1860
AsuHPI GGTGA 5 cut(s) 523, 851, 904, 938, 1120
AvaII GGWCC 2 cut(s) 1423, 1856
BaeGI GKGCMC 1 cut(s) 438
BalI TGGCCA 2 cut(s) 1676, 1851
BamHI GGATCC 1 cut(s) 454
BanI GGYRCC 3 cut(s) 208, 635, 1342
BanII GRGCYC 1 cut(s) 296
BbsI GAAGAC 2 cut(s) 93, 574
BbvI GCAGC 5 cut(s) 298, 1240, 1479, 1551, 1630
BccI CCATC 3 cut(s) 395, 1423, 1681
BceAI ACGGC 2 cut(s) 649, 1190
BciT130I CCWGG 2 cut(s) 167, 225
BciVI GTATCC 1 cut(s) 665
BcnI CCSGG 1 cut(s) 1860
BcoDI GTCTC 3 cut(s) 370, 1514, 1686
BcuI ACTAGT 1 cut(s) 1330
BfaI CTAG 5 cut(s) 396, 549, 1058, 1133, 1331
BfoI RGCGCY 1 cut(s) 639
BfuI GTATCC 1 cut(s) 665
BisI GCNGC 5 cut(s) 312, 1254, 1493, 1540, 1644
BlsI GCNGC 5 cut(s) 313, 1255, 1494, 1541, 1645
BmcAI AGTACT 3 cut(s) 464, 824, 1601
Bme1390I CCNGG 3 cut(s) 167, 225, 1860
Bme18I GGWCC 2 cut(s) 1423, 1856
BmeRI GACNNNNNGTC 1 cut(s) 249
BmgBI CACGTC 2 cut(s) 572, 1010
BmgT120I GGNCC 4 cut(s) 1080, 1423, 1739, 1856
BmiI GGNNCC 5 cut(s) 210, 456, 637, 1081, 1344
BmrFI CCNGG 3 cut(s) 167, 225, 1860
BmrI ACTGGG 1 cut(s) 1564
BmsI GCATC 6 cut(s) 223, 474, 850, 853, 1293, 1489
BmuI ACTGGG 1 cut(s) 1564
BpiI GAAGAC 2 cut(s) 93, 574
Bpu10I CCTNAGC 2 cut(s) 117, 213
BpuEI CTTGAG 2 cut(s) 1244, 1361
BpuMI CCSGG 1 cut(s) 1860
Bsa29I ATCGAT 1 cut(s) 1021
BsaHI GRCGYC 3 cut(s) 150, 156, 636
BsaJI CCNNGG 7 cut(s) 813, 1266, 1314, 1419, 1802, 1852, 1859
BsaWI WCCGGW 1 cut(s) 58
Bsc4I CCNNNNNNNGG 8 cut(s) 58, 224, 922, 923, 1420, 1612, 1683, 1858
Bse1I ACTGG 2 cut(s) 1515, 1559
Bse3DI GCAATG 2 cut(s) 762, 1634
BseBI CCWGG 2 cut(s) 167, 225
BseCI ATCGAT 1 cut(s) 1021
BseDI CCNNGG 7 cut(s) 813, 1266, 1314, 1419, 1802, 1852, 1859
BseGI GGATG 6 cut(s) 178, 343, 1309, 1415, 1504, 1692
BseLI CCNNNNNNNGG 8 cut(s) 58, 224, 922, 923, 1420, 1612, 1683, 1858
BseMI GCAATG 2 cut(s) 762, 1634
BseMII CTCAG 3 cut(s) 204, 321, 731
BseNI ACTGG 2 cut(s) 1515, 1559
BseRI GAGGAG 2 cut(s) 1133, 1844
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 5 cut(s) 298, 1240, 1479, 1551, 1630
BseYI CCCAGC 2 cut(s) 99, 627
BsgI GTGCAG 1 cut(s) 297
Bsh1236I CGCG 1 cut(s) 559
BshFI GGCC 5 cut(s) 622, 1082, 1676, 1740, 1851
BshNI GGYRCC 3 cut(s) 208, 635, 1342
BshVI ATCGAT 1 cut(s) 1021
BsiSI CCGG 3 cut(s) 59, 179, 1859
BslFI GGGAC 1 cut(s) 644
BslI CCNNNNNNNGG 8 cut(s) 58, 224, 922, 923, 1420, 1612, 1683, 1858
BsmAI GTCTC 3 cut(s) 370, 1514, 1686
BsmBI CGTCTC 1 cut(s) 1686
BsmFI GGGAC 1 cut(s) 644
BsmI GAATGC 3 cut(s) 475, 1387, 1577
BsnI GGCC 5 cut(s) 622, 1082, 1676, 1740, 1851
Bsp1286I GDGCHC 2 cut(s) 296, 438
Bsp143I GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
Bsp19I CCATGG 2 cut(s) 813, 1852
BspACI CCGC 9 cut(s) 52, 236, 383, 487, 1106, 1232, 1256, 1495, 1778
BspANI GGCC 5 cut(s) 622, 1082, 1676, 1740, 1851
BspCNI CTCAG 3 cut(s) 205, 320, 730
BspDI ATCGAT 1 cut(s) 1021
BspFNI CGCG 1 cut(s) 559
BspLI GGNNCC 5 cut(s) 210, 456, 637, 1081, 1344
BspPI GGATC 5 cut(s) 449, 462, 621, 1064, 1722
BspQI GCTCTTC 1 cut(s) 301
BspT107I GGYRCC 3 cut(s) 208, 635, 1342
BsrDI GCAATG 2 cut(s) 762, 1634
BsrI ACTGG 2 cut(s) 1515, 1559
BssECI CCNNGG 7 cut(s) 813, 1266, 1314, 1419, 1802, 1852, 1859
BssMI GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
BssNAI GTATAC 1 cut(s) 1632
BssNI GRCGYC 3 cut(s) 150, 156, 636
BssT1I CCWWGG 4 cut(s) 813, 1266, 1419, 1852
Bst1107I GTATAC 1 cut(s) 1632
Bst2UI CCWGG 2 cut(s) 167, 225
Bst4CI ACNGT 7 cut(s) 710, 947, 981, 1053, 1140, 1318, 1803
Bst6I CTCTTC 2 cut(s) 301, 345
BstACI GRCGYC 3 cut(s) 150, 156, 636
BstAPI GCANNNNNTGC 1 cut(s) 1489
BstC8I GCNNGC 3 cut(s) 366, 1296, 1641
BstDEI CTNAG 6 cut(s) 117, 213, 307, 717, 870, 1526
BstDSI CCRYGG 4 cut(s) 813, 1314, 1802, 1852
BstF5I GGATG 6 cut(s) 178, 343, 1309, 1415, 1504, 1692
BstFNI CGCG 1 cut(s) 559
BstH2I RGCGCY 1 cut(s) 639
BstHHI GCGC 4 cut(s) 364, 370, 559, 638
BstKTI GATC 7 cut(s) 457, 616, 754, 1025, 1072, 1285, 1717
BstMAI GTCTC 3 cut(s) 370, 1514, 1686
BstMBI GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
BstMWI GCNNNNNNNGC 6 cut(s) 291, 633, 722, 1112, 1489, 1708
BstNI CCWGG 2 cut(s) 167, 225
BstNSI RCATGY 2 cut(s) 368, 1563
BstSCI CCNGG 3 cut(s) 165, 223, 1858
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 1 cut(s) 559
BstV1I GCAGC 5 cut(s) 298, 1240, 1479, 1551, 1630
BstV2I GAAGAC 2 cut(s) 93, 574
BstX2I RGATCY 2 cut(s) 454, 1714
BstXI CCANNNNNNTGG 3 cut(s) 107, 646, 1847
BstYI RGATCY 2 cut(s) 454, 1714
BstZ17I GTATAC 1 cut(s) 1632
Bsu15I ATCGAT 1 cut(s) 1021
BsuI GTATCC 1 cut(s) 665
BsuRI GGCC 5 cut(s) 622, 1082, 1676, 1740, 1851
BsuTUI ATCGAT 1 cut(s) 1021
BtgI CCRYGG 4 cut(s) 813, 1314, 1802, 1852
BtrI CACGTC 2 cut(s) 572, 1010
BtsCI GGATG 6 cut(s) 178, 343, 1309, 1415, 1504, 1692
BtsI GCAGTG 1 cut(s) 1509
BtsIMutI CAGTG 2 cut(s) 977, 1509
Cac8I GCNNGC 3 cut(s) 366, 1296, 1641
CaiI CAGNNNCTG 1 cut(s) 230
CfoI GCGC 4 cut(s) 364, 370, 559, 638
Cfr13I GGNCC 4 cut(s) 1080, 1423, 1739, 1856
ClaI ATCGAT 1 cut(s) 1021
CseI GACGC 2 cut(s) 158, 164
Csp6I GTAC 5 cut(s) 463, 650, 823, 1343, 1600
CviQI GTAC 5 cut(s) 463, 650, 823, 1343, 1600
DdeI CTNAG 6 cut(s) 117, 213, 307, 717, 870, 1526
DinI GGCGCC 1 cut(s) 637
DpnI GATC 7 cut(s) 456, 615, 753, 1024, 1071, 1284, 1716
DpnII GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
DrdI GACNNNNNNGTC 1 cut(s) 1014
DriI GACNNNNNGTC 1 cut(s) 249
DseDI GACNNNNNNGTC 1 cut(s) 1014
EaeI YGGCCR 2 cut(s) 1674, 1849
Eam1104I CTCTTC 2 cut(s) 301, 345
Eam1105I GACNNNNNGTC 1 cut(s) 249
EarI CTCTTC 2 cut(s) 301, 345
EciI GGCGGA 1 cut(s) 398
Eco130I CCWWGG 4 cut(s) 813, 1266, 1419, 1852
Eco24I GRGCYC 1 cut(s) 296
Eco32I GATATC 1 cut(s) 14
Eco47I GGWCC 2 cut(s) 1423, 1856
Eco57I CTGAAG 2 cut(s) 38, 1167
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 2 cut(s) 165, 223
EcoRV GATATC 1 cut(s) 14
EcoT14I CCWWGG 4 cut(s) 813, 1266, 1419, 1852
EcoT22I ATGCAT 3 cut(s) 1129, 1387, 1704
EcoT38I GRGCYC 1 cut(s) 296
EgeI GGCGCC 1 cut(s) 637
EheI GGCGCC 1 cut(s) 637
ErhI CCWWGG 4 cut(s) 813, 1266, 1419, 1852
Esp3I CGTCTC 1 cut(s) 1686
FaqI GGGAC 1 cut(s) 644
FauI CCCGC 1 cut(s) 1488
FblI GTMKAC 1 cut(s) 1631
Fnu4HI GCNGC 5 cut(s) 312, 1254, 1493, 1540, 1644
FokI GGATG 6 cut(s) 185, 350, 1296, 1402, 1511, 1699
FriOI GRGCYC 1 cut(s) 296
Fsp4HI GCNGC 5 cut(s) 312, 1254, 1493, 1540, 1644
FspAI RTGCGCAY 2 cut(s) 363, 369
FspBI CTAG 5 cut(s) 396, 549, 1058, 1133, 1331
FspI TGCGCA 2 cut(s) 363, 369
GlaI GCGC 4 cut(s) 363, 369, 558, 637
GluI GCNGC 5 cut(s) 312, 1254, 1493, 1540, 1644
GsaI CCCAGC 2 cut(s) 103, 631
HaeII RGCGCY 1 cut(s) 639
HaeIII GGCC 5 cut(s) 622, 1082, 1676, 1740, 1851
HapII CCGG 3 cut(s) 59, 179, 1859
HgaI GACGC 2 cut(s) 158, 164
HhaI GCGC 4 cut(s) 364, 370, 559, 638
Hin1I GRCGYC 3 cut(s) 150, 156, 636
Hin6I GCGC 4 cut(s) 362, 368, 557, 636
HinP1I GCGC 4 cut(s) 362, 368, 557, 636
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HpaII CCGG 3 cut(s) 59, 179, 1859
HphI GGTGA 5 cut(s) 523, 851, 904, 938, 1120
Hpy166II GTNNAC 5 cut(s) 124, 912, 984, 1365, 1632
Hpy188I TCNGA 6 cut(s) 18, 67, 720, 1147, 1588, 1621
Hpy188III TCNNGA 4 cut(s) 549, 1223, 1378, 1475
Hpy8I GTNNAC 5 cut(s) 124, 912, 984, 1365, 1632
Hpy99I CGWCG 4 cut(s) 149, 152, 158, 164
HpyAV CCTTC 2 cut(s) 146, 665
HpyCH4III ACNGT 7 cut(s) 710, 947, 981, 1053, 1140, 1318, 1803
HpyCH4IV ACGT 3 cut(s) 571, 1009, 1695
HpyF10VI GCNNNNNNNGC 6 cut(s) 291, 633, 722, 1112, 1489, 1708
HpyF3I CTNAG 6 cut(s) 117, 213, 307, 717, 870, 1526
HpySE526I ACGT 3 cut(s) 571, 1009, 1695
Hsp92I GRCGYC 3 cut(s) 150, 156, 636
HspAI GCGC 4 cut(s) 362, 368, 557, 636
KasI GGCGCC 1 cut(s) 635
KpnI GGTACC 1 cut(s) 1346
Kzo9I GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
LguI GCTCTTC 1 cut(s) 301
LmnI GCTCC 1 cut(s) 1750
Lsp1109I GCAGC 5 cut(s) 298, 1240, 1479, 1551, 1630
LweI GCATC 6 cut(s) 223, 474, 850, 853, 1293, 1489
MaeI CTAG 5 cut(s) 396, 549, 1058, 1133, 1331
MaeII ACGT 3 cut(s) 571, 1009, 1695
MaeIII GTNAC 3 cut(s) 601, 710, 1053
MalI GATC 7 cut(s) 456, 615, 753, 1024, 1071, 1284, 1716
MboI GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
MflI RGATCY 2 cut(s) 454, 1714
MhlI GDGCHC 2 cut(s) 296, 438
MlsI TGGCCA 2 cut(s) 1676, 1851
MluCI AATT 6 cut(s) 415, 1186, 1478, 1487, 1515, 1824
MluNI TGGCCA 2 cut(s) 1676, 1851
Mly113I GGCGCC 1 cut(s) 636
MlyI GAGTC 2 cut(s) 1516, 1799
MmeI TCCRAC 1 cut(s) 591
Mox20I TGGCCA 2 cut(s) 1676, 1851
Mph1103I ATGCAT 3 cut(s) 1129, 1387, 1704
MroXI GAANNNNTTC 1 cut(s) 593
MscI TGGCCA 2 cut(s) 1676, 1851
MseI TTAA 5 cut(s) 411, 828, 921, 1434, 1873
MslI CAYNNNNRTG 3 cut(s) 369, 644, 1815
Msp20I TGGCCA 2 cut(s) 1676, 1851
MspA1I CMGCKG 3 cut(s) 311, 1253, 1643
MspI CCGG 3 cut(s) 59, 179, 1859
MspR9I CCNGG 3 cut(s) 167, 225, 1860
Mva1269I GAATGC 3 cut(s) 475, 1387, 1577
MvaI CCWGG 2 cut(s) 167, 225
MvnI CGCG 1 cut(s) 559
MwoI GCNNNNNNNGC 6 cut(s) 291, 633, 722, 1112, 1489, 1708
NarI GGCGCC 1 cut(s) 636
NciI CCSGG 1 cut(s) 1860
NcoI CCATGG 2 cut(s) 813, 1852
NdeII GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
NlaIV GGNNCC 5 cut(s) 210, 456, 637, 1081, 1344
NmuCI GTSAC 3 cut(s) 601, 710, 1053
NsbI TGCGCA 2 cut(s) 363, 369
NsiI ATGCAT 3 cut(s) 1129, 1387, 1704
NspI RCATGY 2 cut(s) 368, 1563
PaeI GCATGC 1 cut(s) 368
PciSI GCTCTTC 1 cut(s) 301
PcsI WCGNNNNNNNCGW 4 cut(s) 150, 156, 675, 1799
PctI GAATGC 3 cut(s) 475, 1387, 1577
PdmI GAANNNNTTC 1 cut(s) 593
PfeI GAWTC 8 cut(s) 62, 529, 731, 800, 901, 1235, 1247, 1410
PflMI CCANNNNNTGG 1 cut(s) 1612
PkrI GCNGC 5 cut(s) 313, 1255, 1494, 1541, 1645
PleI GAGTC 2 cut(s) 1516, 1798
PluTI GGCGCC 1 cut(s) 639
PpsI GAGTC 2 cut(s) 1516, 1798
Psp6I CCWGG 2 cut(s) 165, 223
PspFI CCCAGC 2 cut(s) 99, 627
PspGI CCWGG 2 cut(s) 165, 223
PspN4I GGNNCC 5 cut(s) 210, 456, 637, 1081, 1344
PspPI GGNCC 4 cut(s) 1080, 1423, 1739, 1856
PstNI CAGNNNCTG 1 cut(s) 230
PsuI RGATCY 2 cut(s) 454, 1714
PvuII CAGCTG 3 cut(s) 311, 1253, 1643
RsaI GTAC 5 cut(s) 464, 651, 824, 1344, 1601
RsaNI GTAC 5 cut(s) 463, 650, 823, 1343, 1600
RseI CAYNNNNRTG 3 cut(s) 369, 644, 1815
SapI GCTCTTC 1 cut(s) 301
SaqAI TTAA 5 cut(s) 411, 828, 921, 1434, 1873
SatI GCNGC 5 cut(s) 312, 1254, 1493, 1540, 1644
Sau3AI GATC 7 cut(s) 454, 613, 751, 1022, 1069, 1282, 1714
Sau96I GGNCC 4 cut(s) 1080, 1423, 1739, 1856
ScaI AGTACT 3 cut(s) 464, 824, 1601
SchI GAGTC 2 cut(s) 1516, 1799
ScrFI CCNGG 3 cut(s) 167, 225, 1860
SduI GDGCHC 2 cut(s) 296, 438
SfaNI GCATC 6 cut(s) 223, 474, 850, 853, 1293, 1489
SfoI GGCGCC 1 cut(s) 637
SinI GGWCC 2 cut(s) 1423, 1856
SmiMI CAYNNNNRTG 3 cut(s) 369, 644, 1815
SmlI CTYRAG 2 cut(s) 1223, 1376
SmoI CTYRAG 2 cut(s) 1223, 1376
SpeI ACTAGT 1 cut(s) 1330
SphI GCATGC 1 cut(s) 368
Sse9I AATT 6 cut(s) 415, 1186, 1478, 1487, 1515, 1824
SsiI CCGC 9 cut(s) 52, 236, 383, 487, 1106, 1232, 1256, 1495, 1778
SspDI GGCGCC 1 cut(s) 635
SspMI CTAG 5 cut(s) 396, 549, 1058, 1133, 1331
StyD4I CCNGG 3 cut(s) 165, 223, 1858
StyI CCWWGG 4 cut(s) 813, 1266, 1419, 1852
TaaI ACNGT 7 cut(s) 710, 947, 981, 1053, 1140, 1318, 1803
TaiI ACGT 3 cut(s) 574, 1012, 1698
TaqI TCGA 5 cut(s) 10, 132, 242, 1021, 1765
TasI AATT 6 cut(s) 415, 1186, 1478, 1487, 1515, 1824
TatI WGTACW 3 cut(s) 462, 822, 1599
TfiI GAWTC 8 cut(s) 62, 529, 731, 800, 901, 1235, 1247, 1410
Tru1I TTAA 5 cut(s) 411, 828, 921, 1434, 1873
Tru9I TTAA 5 cut(s) 411, 828, 921, 1434, 1873
TscAI CASTG 2 cut(s) 984, 1509
TseFI GTSAC 3 cut(s) 601, 710, 1053
TseI GCWGC 5 cut(s) 311, 1253, 1492, 1539, 1643
Tsp45I GTSAC 3 cut(s) 601, 710, 1053
TspDTI ATGAA 9 cut(s) 207, 572, 656, 969, 1007, 1298, 1304, 1416, 1799
TspGWI ACGGA 3 cut(s) 597, 684, 1382
TspRI CASTG 2 cut(s) 984, 1509
Van91I CCANNNNNTGG 1 cut(s) 1612
VpaK11BI GGWCC 2 cut(s) 1423, 1856
XapI RAATTY 2 cut(s) 415, 1186
XbaI TCTAGA 1 cut(s) 548
XceI RCATGY 2 cut(s) 368, 1563
XcmI CCANNNNNNNNNTGG 1 cut(s) 1684
XmiI GTMKAC 1 cut(s) 1631
XmnI GAANNNNTTC 1 cut(s) 593
XspI CTAG 5 cut(s) 396, 549, 1058, 1133, 1331
ZrmI AGTACT 3 cut(s) 464, 824, 1601
Zsp2I ATGCAT 3 cut(s) 1129, 1387, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.