Rh1DG295600

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0007094
Physical Location & Seq
Forward (+)
52128217 .. 52131394
3178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG295600.1

Sequence Viewer

Length: 1887 bp
ATGTCTGCTCGGTATCTGAAGAAAGTTCTCAAGGAAGAACAAGAAGAGCGACAACTGGAATCAGACCACGAAGAAGAAGAAGAAGAAGACGACGACGACCACCGCCAGCTCAACGGCAAAGCAAAGGTCAACCCTTTCGACCTCCTCAACGAAGAGGAAGACGATGCCGACGACCACCAGGAGGATGAGTCAGAAACTGTTGATGAACCCTCGAGTGTGGTGAAGCCTAGTGCTGATGTGGTTTCGACATCCAGTCAAAAATCCAAGAAGAAGAAGAAGAAGAAAGGCAAAGAGGGCTCTTCTTCTAATGCAGCTGCACCGAGAGTTAAAAAGTCGCCGGATGAGGTTCTGGAAGAATTCTATGAGTATGCGCATGAAAGACAAGCCGAGACGAGGGCTGGTGGTGATGCGGTTAAGCATTCGTATGAAAAGTATGTGCCCTTCATATTGCAAGTGGATCCCAAGTACTTGAATGCCGACAATGAGATGCGAAGAATCTTTGGGGCTAAGGTGGTCAAGTCGTTTGAGAAGAATCAACAGAGTGGAAGCTCTAGAATGGCGCGTGGTGGAAGACGCGGCGCAGTTCATAGGAAGTCTTTCCTTGTCACTCCGTTGGAGCATTGGCCTCGCTGGGACGGTGCTATGAACATGGAACTCCTTCACTCCCCCAATGGATACTATGATTATCGATATACCTATTCGTCAGCCTACCGTCAAGCTCAGAGTGCATTTGAATCTGCCAAAGCTATACATGATCTCAATGCCATTGCAAGTGTTTTATTATACTATCCTTACCATTTAGATTCGCTACTAACCATGGCAGAGTACTTTAAGTTTGTGGGTGAGCATCAAATGTCAGCAGATGCTATCTCGAAGTGCTTATATGCTTTGGAATGTGCATGGTCTCCAATGTTCACCCCCTTTAAGGGTGATTGCCAAGTGAAATACAGCCATGAAGCAAACAAACCTCTGTTCGTTGCACTTTTTACTCACATGAAAAGTATGGACAGACGTGGCTGTCATCGATCTGCTTTAGAAGTTTGCAAGTTTTTACTGTCACTAGATACTGACGATCCAATGGGGGCCATGTTCTGTATTGACTATTTTGCGGTGAGGGCAGAGGAGTATGCATGGCTAGAACGTTTCTCTGAAGAATATAAAAGTGATAACACCCTATGGTTGTTTCCAAATTTTTCATATTCCCTTGCCGTATGCCGATTGTATCTTGAGAAAGCGGAATCTTCGAAAGATCCAGCTATGGAAACCACCAAGGCTACTTCGACTGATCTTATGAAGCAGGCATTGATGCTTCATCCCACAGTCCTCAAGAAACTAGTGGCAAAGGTACCTTTGAAGGAACGGGTGTGGACGGATATACTCAAAAATGCATTCTTCCAAGCAGATGAAGTAGGAATCCCATCCTTGGACCACCTGGTTAACATATATGTTGAGAGTAATCATATTATATGGAGGCTTCCAGAATTGCAGAAATTGCTGCGGGAAGCTTCACAGCTGGTGATCGAGACTCTAAGACAGAATAGTAGCGAAAAGAATGATTGGGCATGTGTGAGAAAAGAAGCATTCTCATCTGACAAGAATGAGTATTCCCACTTGTTGGTTTCAGATTTCTCTTATACATTGCCTGCTGCCCCACCTGAAAATTTGCAACATTTTATGGCCAATGCAAGGATGGAGGATGTTGTGCATAATGAGCAGCAACTTGTCAATCTAAATGAGGGTGGCCATGCTCCCCGTGATGTTGCAAATCGAAATCCATTAGCGGTCTTGTTTGAGTCGGTCTTACCATGGGTTCATTATGGGGAAGGAGCGGTTGTTGAGGAGGAAGACCAACAAAATGGCCATGGTCCGGGCAATCAAGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcf25

Protein Analysis

628

Amino Acids

71.96

Weight (kDa)

5.4

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcf25 PF04910 229 - 553 4.6e-69 Transcriptional repressor TCF25
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1017
Acc16I TGCGCA 1 cut(s) 372
Acc65I GGTACC 1 cut(s) 1345
AccB1I GGYRCC 1 cut(s) 1345
AccB7I CCANNNNNTGG 1 cut(s) 1615
AccBSI CCGCTC 1 cut(s) 1829
AccII CGCG 2 cut(s) 562, 576
AciI CCGC 8 cut(s) 103, 410, 576, 1109, 1235, 1498, 1781, 1829
AclI AACGTT 1 cut(s) 1141
AclWI GGATC 4 cut(s) 452, 465, 1067, 1244
AcoI YGGCCR 3 cut(s) 1677, 1741, 1858
AcsI RAATTY 3 cut(s) 356, 1189, 1660
AcuI CTGAAG 2 cut(s) 38, 1170
AfaI GTAC 3 cut(s) 467, 827, 1347
AfiI CCNNNNNNNGG 8 cut(s) 181, 393, 925, 926, 1423, 1615, 1686, 1867
AgsI TTSAA 3 cut(s) 472, 734, 1354
AhdI GACNNNNNGTC 1 cut(s) 252
AhlI ACTAGT 1 cut(s) 1333
AjiI CACGTC 1 cut(s) 1013
AjnI CCWGG 2 cut(s) 177, 1431
AluBI AGCT 8 cut(s) 109, 314, 549, 719, 746, 1256, 1505, 1513
AluI AGCT 8 cut(s) 109, 314, 549, 719, 746, 1256, 1505, 1513
Alw26I GTCTC 3 cut(s) 383, 909, 1517
AlwI GGATC 4 cut(s) 452, 465, 1067, 1244
AlwNI CAGNNNCTG 1 cut(s) 197
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 5 cut(s) 623, 1083, 1677, 1741, 1858
ApeKI GCWGC 5 cut(s) 311, 314, 1495, 1646, 1714
ApoI RAATTY 3 cut(s) 356, 1189, 1660
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
Asp700I GAANNNNTTC 2 cut(s) 596, 657
Asp718I GGTACC 1 cut(s) 1345
AspLEI GCGC 3 cut(s) 373, 562, 581
AspS9I GGNCC 3 cut(s) 1083, 1426, 1865
AsuC2I CCSGG 1 cut(s) 1869
AsuHPI GGTGA 7 cut(s) 232, 416, 854, 907, 941, 1123, 1528
AsuII TTCGAA 1 cut(s) 1244
AvaI CYCGRG 1 cut(s) 211
AvaII GGWCC 2 cut(s) 1426, 1865
BaeGI GKGCMC 1 cut(s) 441
BalI TGGCCA 3 cut(s) 1679, 1743, 1860
BamHI GGATCC 1 cut(s) 457
BanI GGYRCC 1 cut(s) 1345
BanII GRGCYC 1 cut(s) 299
BarI GAAGNNNNNNTAC 2 cut(s) 425, 457
BbsI GAAGAC 4 cut(s) 93, 165, 577, 1851
BbvI GCAGC 5 cut(s) 301, 323, 1482, 1633, 1726
BccI CCATC 2 cut(s) 1426, 1684
BceAI ACGGC 2 cut(s) 130, 1193
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BciT130I CCWGG 2 cut(s) 179, 1433
BciVI GTATCC 1 cut(s) 668
BcnI CCSGG 1 cut(s) 1869
BcoDI GTCTC 3 cut(s) 383, 909, 1517
BcuI ACTAGT 1 cut(s) 1333
BfaI CTAG 5 cut(s) 228, 552, 1061, 1136, 1334
BfuI GTATCC 1 cut(s) 668
BisI GCNGC 6 cut(s) 312, 315, 577, 1496, 1647, 1715
BlsI GCNGC 6 cut(s) 313, 316, 578, 1497, 1648, 1716
BmcAI AGTACT 2 cut(s) 467, 827
Bme1390I CCNGG 3 cut(s) 179, 1433, 1869
Bme18I GGWCC 2 cut(s) 1426, 1865
BmeRI GACNNNNNGTC 1 cut(s) 252
BmeT110I CYCGRG 1 cut(s) 211
BmgBI CACGTC 1 cut(s) 1013
BmgT120I GGNCC 3 cut(s) 1083, 1426, 1865
BmiI GGNNCC 3 cut(s) 459, 1084, 1347
BmrFI CCNGG 3 cut(s) 179, 1433, 1869
BmsI GCATC 6 cut(s) 154, 397, 477, 853, 856, 1296
BpiI GAAGAC 4 cut(s) 93, 165, 577, 1851
Bpu10I CCTNAGC 1 cut(s) 507
Bpu14I TTCGAA 1 cut(s) 1244
BpuEI CTTGAG 3 cut(s) 14, 1247, 1310
BpuMI CCSGG 1 cut(s) 1869
Bsa29I ATCGAT 2 cut(s) 688, 1024
BsaI GGTCTC 1 cut(s) 909
BsaJI CCNNGG 5 cut(s) 816, 1269, 1422, 1805, 1861
BsaXI ACNNNNNCTCC 4 cut(s) 173, 203, 1818, 1848
Bsc4I CCNNNNNNNGG 8 cut(s) 181, 393, 925, 926, 1423, 1615, 1686, 1867
Bse1I ACTGG 2 cut(s) 60, 252
Bse3DI GCAATG 2 cut(s) 765, 1637
BseBI CCWGG 2 cut(s) 179, 1433
BseCI ATCGAT 2 cut(s) 688, 1024
BseDI CCNNGG 5 cut(s) 816, 1269, 1422, 1805, 1861
BseGI GGATG 7 cut(s) 190, 248, 346, 1312, 1418, 1695, 1702
BseLI CCNNNNNNNGG 8 cut(s) 181, 393, 925, 926, 1423, 1615, 1686, 1867
BseMI GCAATG 2 cut(s) 765, 1637
BseMII CTCAG 1 cut(s) 734
BseNI ACTGG 2 cut(s) 60, 252
BseRI GAGGAG 3 cut(s) 134, 1136, 1853
BseSI GKGCMC 1 cut(s) 441
BseXI GCAGC 5 cut(s) 301, 323, 1482, 1633, 1726
BseYI CCCAGC 1 cut(s) 630
BsgI GTGCAG 1 cut(s) 300
Bsh1236I CGCG 2 cut(s) 562, 576
BshFI GGCC 5 cut(s) 625, 1085, 1679, 1743, 1860
BshNI GGYRCC 1 cut(s) 1345
BshVI ATCGAT 2 cut(s) 688, 1024
BsiHKCI CYCGRG 1 cut(s) 211
BsiSI CCGG 2 cut(s) 338, 1868
BslFI GGGAC 1 cut(s) 647
BslI CCNNNNNNNGG 8 cut(s) 181, 393, 925, 926, 1423, 1615, 1686, 1867
BsmAI GTCTC 3 cut(s) 383, 909, 1517
BsmBI CGTCTC 1 cut(s) 383
BsmFI GGGAC 1 cut(s) 647
BsmI GAATGC 4 cut(s) 418, 478, 1388, 1580
BsnI GGCC 5 cut(s) 625, 1085, 1679, 1743, 1860
Bso31I GGTCTC 1 cut(s) 909
BsoBI CYCGRG 1 cut(s) 211
Bsp119I TTCGAA 1 cut(s) 1244
Bsp1286I GDGCHC 2 cut(s) 299, 441
Bsp143I GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
Bsp19I CCATGG 3 cut(s) 816, 1805, 1861
BspACI CCGC 8 cut(s) 103, 410, 576, 1109, 1235, 1498, 1781, 1829
BspANI GGCC 5 cut(s) 625, 1085, 1679, 1743, 1860
BspCNI CTCAG 1 cut(s) 733
BspDI ATCGAT 2 cut(s) 688, 1024
BspFNI CGCG 2 cut(s) 562, 576
BspLI GGNNCC 3 cut(s) 459, 1084, 1347
BspPI GGATC 4 cut(s) 452, 465, 1067, 1244
BspQI GCTCTTC 2 cut(s) 39, 304
BspT104I TTCGAA 1 cut(s) 1244
BspT107I GGYRCC 1 cut(s) 1345
BspTNI GGTCTC 1 cut(s) 909
BsrBI CCGCTC 1 cut(s) 1829
BsrDI GCAATG 2 cut(s) 765, 1637
BsrI ACTGG 2 cut(s) 60, 252
BssECI CCNNGG 5 cut(s) 816, 1269, 1422, 1805, 1861
BssMI GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
BssT1I CCWWGG 5 cut(s) 816, 1269, 1422, 1805, 1861
Bst2UI CCWGG 2 cut(s) 179, 1433
Bst4CI ACNGT 5 cut(s) 199, 638, 713, 1056, 1321
Bst6I CTCTTC 3 cut(s) 39, 147, 304
BstAPI GCANNNNNTGC 1 cut(s) 1492
BstBI TTCGAA 1 cut(s) 1244
BstC8I GCNNGC 3 cut(s) 107, 1299, 1644
BstDEI CTNAG 3 cut(s) 507, 720, 1529
BstDSI CCRYGG 3 cut(s) 816, 1805, 1861
BstF5I GGATG 7 cut(s) 190, 248, 346, 1312, 1418, 1695, 1702
BstFNI CGCG 2 cut(s) 562, 576
BstHHI GCGC 3 cut(s) 373, 562, 581
BstKTI GATC 7 cut(s) 460, 757, 1028, 1075, 1252, 1288, 1521
BstMAI GTCTC 3 cut(s) 383, 909, 1517
BstMBI GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
BstMWI GCNNNNNNNGC 5 cut(s) 294, 725, 1115, 1492, 1711
BstNI CCWGG 2 cut(s) 179, 1433
BstNSI RCATGY 1 cut(s) 1566
BstSCI CCNGG 3 cut(s) 177, 1431, 1867
BstSLI GKGCMC 1 cut(s) 441
BstUI CGCG 2 cut(s) 562, 576
BstV1I GCAGC 5 cut(s) 301, 323, 1482, 1633, 1726
BstV2I GAAGAC 4 cut(s) 93, 165, 577, 1851
BstX2I RGATCY 2 cut(s) 457, 1249
BstXI CCANNNNNNTGG 1 cut(s) 1856
BstYI RGATCY 2 cut(s) 457, 1249
Bsu15I ATCGAT 2 cut(s) 688, 1024
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 5 cut(s) 625, 1085, 1679, 1743, 1860
BsuTUI ATCGAT 2 cut(s) 688, 1024
BtgI CCRYGG 3 cut(s) 816, 1805, 1861
BtrI CACGTC 1 cut(s) 1013
BtsCI GGATG 7 cut(s) 190, 248, 346, 1312, 1418, 1695, 1702
Cac8I GCNNGC 3 cut(s) 107, 1299, 1644
CaiI CAGNNNCTG 1 cut(s) 197
CfoI GCGC 3 cut(s) 373, 562, 581
Cfr13I GGNCC 3 cut(s) 1083, 1426, 1865
ClaI ATCGAT 2 cut(s) 688, 1024
CseI GACGC 1 cut(s) 582
CsiI ACCWGGT 1 cut(s) 1431
Csp6I GTAC 3 cut(s) 466, 826, 1346
CviQI GTAC 3 cut(s) 466, 826, 1346
DdeI CTNAG 3 cut(s) 507, 720, 1529
DpnI GATC 7 cut(s) 459, 756, 1027, 1074, 1251, 1287, 1520
DpnII GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
DrdI GACNNNNNNGTC 1 cut(s) 1017
DriI GACNNNNNGTC 1 cut(s) 252
DseDI GACNNNNNNGTC 1 cut(s) 1017
EaeI YGGCCR 3 cut(s) 1677, 1741, 1858
Eam1104I CTCTTC 3 cut(s) 39, 147, 304
Eam1105I GACNNNNNGTC 1 cut(s) 252
EarI CTCTTC 3 cut(s) 39, 147, 304
Eco130I CCWWGG 5 cut(s) 816, 1269, 1422, 1805, 1861
Eco24I GRGCYC 1 cut(s) 299
Eco31I GGTCTC 1 cut(s) 909
Eco47I GGWCC 2 cut(s) 1426, 1865
Eco57I CTGAAG 2 cut(s) 38, 1170
Eco88I CYCGRG 1 cut(s) 211
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 2 cut(s) 177, 1431
EcoT14I CCWWGG 5 cut(s) 816, 1269, 1422, 1805, 1861
EcoT22I ATGCAT 2 cut(s) 1132, 1390
EcoT38I GRGCYC 1 cut(s) 299
ErhI CCWWGG 5 cut(s) 816, 1269, 1422, 1805, 1861
Esp3I CGTCTC 1 cut(s) 383
FaqI GGGAC 1 cut(s) 647
FauI CCCGC 1 cut(s) 1491
Fnu4HI GCNGC 6 cut(s) 312, 315, 577, 1496, 1647, 1715
FokI GGATG 7 cut(s) 197, 235, 353, 1299, 1405, 1702, 1709
FriOI GRGCYC 1 cut(s) 299
Fsp4HI GCNGC 6 cut(s) 312, 315, 577, 1496, 1647, 1715
FspAI RTGCGCAY 1 cut(s) 372
FspBI CTAG 5 cut(s) 228, 552, 1061, 1136, 1334
FspI TGCGCA 1 cut(s) 372
GlaI GCGC 3 cut(s) 372, 561, 580
GluI GCNGC 6 cut(s) 312, 315, 577, 1496, 1647, 1715
GsaI CCCAGC 1 cut(s) 634
HaeIII GGCC 5 cut(s) 625, 1085, 1679, 1743, 1860
HapII CCGG 2 cut(s) 338, 1868
HgaI GACGC 1 cut(s) 582
HhaI GCGC 3 cut(s) 373, 562, 581
Hin6I GCGC 3 cut(s) 371, 560, 579
HinP1I GCGC 3 cut(s) 371, 560, 579
HincII GTYRAC 2 cut(s) 130, 1438
HindII GTYRAC 2 cut(s) 130, 1438
HindIII AAGCTT 1 cut(s) 1503
HpaI GTTAAC 1 cut(s) 1438
HpaII CCGG 2 cut(s) 338, 1868
HphI GGTGA 7 cut(s) 232, 416, 854, 907, 941, 1123, 1528
Hpy166II GTNNAC 4 cut(s) 130, 915, 1368, 1438
Hpy188I TCNGA 7 cut(s) 18, 64, 193, 723, 1150, 1591, 1624
Hpy188III TCNNGA 8 cut(s) 350, 552, 871, 1226, 1327, 1478, 1522, 1877
Hpy8I GTNNAC 4 cut(s) 130, 915, 1368, 1438
Hpy99I CGWCG 3 cut(s) 95, 98, 173
HpyAV CCTTC 4 cut(s) 451, 668, 1348, 1817
HpyCH4III ACNGT 5 cut(s) 199, 638, 713, 1056, 1321
HpyCH4IV ACGT 2 cut(s) 1012, 1141
HpyF10VI GCNNNNNNNGC 5 cut(s) 294, 725, 1115, 1492, 1711
HpyF3I CTNAG 3 cut(s) 507, 720, 1529
HpySE526I ACGT 2 cut(s) 1012, 1141
HspAI GCGC 3 cut(s) 371, 560, 579
KpnI GGTACC 1 cut(s) 1349
KspAI GTTAAC 1 cut(s) 1438
Kzo9I GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
LguI GCTCTTC 2 cut(s) 39, 304
LmnI GCTCC 3 cut(s) 616, 1753, 1826
Lsp1109I GCAGC 5 cut(s) 301, 323, 1482, 1633, 1726
LweI GCATC 6 cut(s) 154, 397, 477, 853, 856, 1296
MabI ACCWGGT 1 cut(s) 1431
MaeI CTAG 5 cut(s) 228, 552, 1061, 1136, 1334
MaeII ACGT 2 cut(s) 1012, 1141
MaeIII GTNAC 2 cut(s) 604, 1056
MalI GATC 7 cut(s) 459, 756, 1027, 1074, 1251, 1287, 1520
MbiI CCGCTC 1 cut(s) 1829
MboI GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
MflI RGATCY 2 cut(s) 457, 1249
MhlI GDGCHC 2 cut(s) 299, 441
MlsI TGGCCA 3 cut(s) 1679, 1743, 1860
MluCI AATT 5 cut(s) 356, 1189, 1481, 1490, 1660
MluNI TGGCCA 3 cut(s) 1679, 1743, 1860
MlyI GAGTC 3 cut(s) 197, 1519, 1802
MmeI TCCRAC 1 cut(s) 594
Mox20I TGGCCA 3 cut(s) 1679, 1743, 1860
Mph1103I ATGCAT 2 cut(s) 1132, 1390
MroXI GAANNNNTTC 2 cut(s) 596, 657
MscI TGGCCA 3 cut(s) 1679, 1743, 1860
MseI TTAA 5 cut(s) 327, 414, 831, 924, 1437
MslI CAYNNNNRTG 1 cut(s) 423
Msp20I TGGCCA 3 cut(s) 1679, 1743, 1860
MspA1I CMGCKG 2 cut(s) 314, 1513
MspI CCGG 2 cut(s) 338, 1868
MspR9I CCNGG 3 cut(s) 179, 1433, 1869
Mva1269I GAATGC 4 cut(s) 418, 478, 1388, 1580
MvaI CCWGG 2 cut(s) 179, 1433
MvnI CGCG 2 cut(s) 562, 576
MwoI GCNNNNNNNGC 5 cut(s) 294, 725, 1115, 1492, 1711
NciI CCSGG 1 cut(s) 1869
NcoI CCATGG 3 cut(s) 816, 1805, 1861
NdeII GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
NlaIV GGNNCC 3 cut(s) 459, 1084, 1347
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 2 cut(s) 604, 1056
NsbI TGCGCA 1 cut(s) 372
NsiI ATGCAT 2 cut(s) 1132, 1390
NspI RCATGY 1 cut(s) 1566
NspV TTCGAA 1 cut(s) 1244
PaeR7I CTCGAG 1 cut(s) 211
PciSI GCTCTTC 2 cut(s) 39, 304
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PctI GAATGC 4 cut(s) 418, 478, 1388, 1580
PdmI GAANNNNTTC 2 cut(s) 596, 657
PfeI GAWTC 7 cut(s) 59, 495, 532, 734, 803, 1238, 1413
PflMI CCANNNNNTGG 1 cut(s) 1615
PkrI GCNGC 6 cut(s) 313, 316, 578, 1497, 1648, 1716
PleI GAGTC 3 cut(s) 196, 1519, 1801
PpsI GAGTC 3 cut(s) 196, 1519, 1801
Psp1406I AACGTT 1 cut(s) 1141
Psp6I CCWGG 2 cut(s) 177, 1431
PspFI CCCAGC 1 cut(s) 630
PspGI CCWGG 2 cut(s) 177, 1431
PspN4I GGNNCC 3 cut(s) 459, 1084, 1347
PspPI GGNCC 3 cut(s) 1083, 1426, 1865
PspXI VCTCGAGB 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 197
PsuI RGATCY 2 cut(s) 457, 1249
PvuII CAGCTG 2 cut(s) 314, 1513
RsaI GTAC 3 cut(s) 467, 827, 1347
RsaNI GTAC 3 cut(s) 466, 826, 1346
RseI CAYNNNNRTG 1 cut(s) 423
SapI GCTCTTC 2 cut(s) 39, 304
SaqAI TTAA 5 cut(s) 327, 414, 831, 924, 1437
SatI GCNGC 6 cut(s) 312, 315, 577, 1496, 1647, 1715
Sau3AI GATC 7 cut(s) 457, 754, 1025, 1072, 1249, 1285, 1518
Sau96I GGNCC 3 cut(s) 1083, 1426, 1865
ScaI AGTACT 2 cut(s) 467, 827
SchI GAGTC 3 cut(s) 197, 1519, 1802
ScrFI CCNGG 3 cut(s) 179, 1433, 1869
SduI GDGCHC 2 cut(s) 299, 441
SexAI ACCWGGT 1 cut(s) 1431
SfaNI GCATC 6 cut(s) 154, 397, 477, 853, 856, 1296
Sfr274I CTCGAG 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 1244
SinI GGWCC 2 cut(s) 1426, 1865
SlaI CTCGAG 1 cut(s) 211
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 4 cut(s) 29, 211, 1226, 1325
SmoI CTYRAG 4 cut(s) 29, 211, 1226, 1325
SpeI ACTAGT 1 cut(s) 1333
Sse9I AATT 5 cut(s) 356, 1189, 1481, 1490, 1660
SsiI CCGC 8 cut(s) 103, 410, 576, 1109, 1235, 1498, 1781, 1829
SspMI CTAG 5 cut(s) 228, 552, 1061, 1136, 1334
StyD4I CCNGG 3 cut(s) 177, 1431, 1867
StyI CCWWGG 5 cut(s) 816, 1269, 1422, 1805, 1861
TaaI ACNGT 5 cut(s) 199, 638, 713, 1056, 1321
TaiI ACGT 2 cut(s) 1015, 1144
TaqII GACCGA 1 cut(s) 1786
TasI AATT 5 cut(s) 356, 1189, 1481, 1490, 1660
TatI WGTACW 2 cut(s) 465, 825
TauI GCSGC 1 cut(s) 579
TfiI GAWTC 7 cut(s) 59, 495, 532, 734, 803, 1238, 1413
Tru1I TTAA 5 cut(s) 327, 414, 831, 924, 1437
Tru9I TTAA 5 cut(s) 327, 414, 831, 924, 1437
TseFI GTSAC 2 cut(s) 604, 1056
TseI GCWGC 5 cut(s) 311, 314, 1495, 1646, 1714
Tsp45I GTSAC 2 cut(s) 604, 1056
TspGWI ACGGA 2 cut(s) 600, 1385
Van91I CCANNNNNTGG 1 cut(s) 1615
VpaK11BI GGWCC 2 cut(s) 1426, 1865
XapI RAATTY 3 cut(s) 356, 1189, 1660
XbaI TCTAGA 1 cut(s) 551
XceI RCATGY 1 cut(s) 1566
XcmI CCANNNNNNNNNTGG 1 cut(s) 1687
XhoI CTCGAG 1 cut(s) 211
XmnI GAANNNNTTC 2 cut(s) 596, 657
XspI CTAG 5 cut(s) 228, 552, 1061, 1136, 1334
ZrmI AGTACT 2 cut(s) 467, 827
Zsp2I ATGCAT 2 cut(s) 1132, 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.