Rh1CG283700

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0007094
Physical Location & Seq
Forward (+)
55488435 .. 55491933
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG283700.1

Sequence Viewer

Length: 1884 bp
ATGTCTGCTCGGTATCTGAAGAAAGTGTTGAAGGAAGAACAAGAGGAGCGACAATTGGAATCAGACCACGAAGAAGAAGAAGAAGACGACGACCACCGCCAGCTCAACGGCAAAGCAAAGATCAACCCTTTCGACCTCCTCAACGACGACGACAACGACGCCGACGACCCCCAGGAGGATGAGTCAGAAACTGCTGTTGATGAACCCTCGAGTGTGGTGAAGCCTAGTGCTGATGTGGTTTCGACATCCAGTCAAAAATCCAAGAAGAAGAAGAAGAAGAAAGGCAAAGAGGGCCCTTCTTCTAATGCAGCTGCACCGAGAGTTAAAAAGTCGCCGGATGAGGTTCTGGAAGAATTCTATGAGTATGCGCATGAAAGACAAGCCGAGACGAGGGCTAGTGGTGATGCGGTTAAGCATTCGTATGAAAAGTATGTGCCCTTCATATTGCAAGTGGATCCCAAGTACTTGAATGCTGACAATGAGATGCGAAGAATCTTTGGGGCTAAGGTGGTCAAGTCGTTTGAGAAGAATCAACAGAGTGGTAGCTCTAGAATGGCGCGTGGTGGAAGACGCGGTGCGGTTCATAGGAAGTCTTTCCTTGTCACTCCGTTGGAGCATTGGCCTCGCTGGGACGGTGCTATGAACATGGAACTCCTTCACTCCCCCAATGGATACTATGATTACCGATATACCTATTCATCAGCCTACCATCAAGCTCAGAGTGCATTTGAATCTGCCAAAGCTATACATGATCTCAATGCCATTGCAAGTGTTTTATTATACTATCCTTACCATTTGGATTCGCTACTAACCATGGCAGAGTACTTTAAGTTTGTGGGTGAGCATCAAATGTCAGCAGATGCTATCTCGAAGTGCTTATATGCTTTGGAATGTGCATGGTCTCCAATGTTCACCCCCTTTAAGGGTGATTGCCAAGTGAAATACAGCCATGAAGCAAACAAACCTCTGTTCGTTGCACTTTTTACTCACATGAAAAGTATGGACAGACGTGGCTGTCATCGATCTGCTTTAGAAGTTTGCAAGTTTTTACTGTCACTAGATACTGACGATCCAATGGGGGCCATGTTCTGTATTGACTATTTTGCGGTGAGGGCAGAGGAGTATGCATGGCTAGAACGTTTCTCTGAAGAATATAAAAGTGATAACACCCTATGGTTGTTTCCAAATTTTTCATATTCCCTTGCCGTATGCCGATTGTATCTTGAGAAAGCCAAATCTTCCAAAGATCCAGCTATGGAAACCACCAAGGCTACTTCAACTGATCTTATGAAGCAGGCATTGATGCTTCATCCCACAGTCCTCAAGAAACTAGTGGCAAAAGTACCTTTGAAGGAACGGGTGTGGACAGATATACTCAAAAATGCATTCTTCCAAGCAGATGAAGTAGGAATCCCATCCTTGGACCACCTGATTAACATATACGTTGAGAGTAATCATATTATATGGAGGCTTCCAGAATTGCAGAAATTGCTGCGGGAAGCAGCACAGCTGGTGATCGAGACTCTAAGACAGAATAGTAGCGAAAAGAATGATTGGGCATGTGTGAGAAAAGAAGCATTCTCATCTGACAAGAATGAGTATTCCCACTTGTTGGTTTCAGACTTCTCTTATACATTGCCTGCTGCCCCACCTGAAAATTTGCAACATTTTATGGCCAATGCAAGGATGGAGGATGTTGTGCATAATGAGCAGCATCTTGTCAATCTAAATGAGGGTGGCCATGCTCCCCGTGATGTTGCAAATCGAAATCCATTAGCGGTCTTGTTTGAGTCGGTGTTACCATGGGTTCATTATGGGGAAGGAGCGTTTGTTGAGGAGGAAGACCAACAAAATGGCCATGGTCCGGGCAATCAAGAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tcf25

Protein Analysis

627

Amino Acids

71.79

Weight (kDa)

5.58

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tcf25 PF04910 228 - 552 1.2e-68 Transcriptional repressor TCF25
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1014
Acc16I TGCGCA 1 cut(s) 369
AccB7I CCANNNNNTGG 1 cut(s) 1612
AccII CGCG 2 cut(s) 559, 573
AciI CCGC 7 cut(s) 97, 407, 573, 578, 1106, 1495, 1778
AclI AACGTT 1 cut(s) 1138
AclWI GGATC 4 cut(s) 449, 462, 1064, 1241
AcoI YGGCCR 3 cut(s) 1674, 1738, 1855
AcsI RAATTY 3 cut(s) 353, 1186, 1657
AcuI CTGAAG 2 cut(s) 38, 1167
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 3 cut(s) 464, 824, 1344
AfiI CCNNNNNNNGG 8 cut(s) 175, 390, 922, 923, 1420, 1612, 1683, 1864
AgsI TTSAA 5 cut(s) 31, 469, 731, 1278, 1351
AhdI GACNNNNNGTC 1 cut(s) 249
AhlI ACTAGT 1 cut(s) 1330
AjiI CACGTC 1 cut(s) 1010
AjnI CCWGG 1 cut(s) 171
AluBI AGCT 7 cut(s) 103, 311, 546, 716, 743, 1253, 1510
AluI AGCT 7 cut(s) 103, 311, 546, 716, 743, 1253, 1510
Alw26I GTCTC 3 cut(s) 380, 906, 1514
AlwI GGATC 4 cut(s) 449, 462, 1064, 1241
AlwNI CAGNNNCTG 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 208
AoxI GGCC 6 cut(s) 292, 620, 1080, 1674, 1738, 1855
ApaI GGGCCC 1 cut(s) 296
ApeKI GCWGC 6 cut(s) 308, 311, 1492, 1502, 1643, 1711
ApoI RAATTY 3 cut(s) 353, 1186, 1657
Asp700I GAANNNNTTC 2 cut(s) 593, 654
AspLEI GCGC 2 cut(s) 370, 559
AspS9I GGNCC 5 cut(s) 292, 293, 1080, 1423, 1862
AsuC2I CCSGG 1 cut(s) 1866
AsuHPI GGTGA 7 cut(s) 229, 413, 851, 904, 938, 1120, 1525
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 2 cut(s) 1423, 1862
BaeGI GKGCMC 2 cut(s) 296, 438
BalI TGGCCA 3 cut(s) 1676, 1740, 1857
BamHI GGATCC 1 cut(s) 454
BanII GRGCYC 1 cut(s) 296
BarI GAAGNNNNNNTAC 2 cut(s) 422, 454
BbsI GAAGAC 3 cut(s) 90, 574, 1848
BbvI GCAGC 6 cut(s) 298, 320, 1479, 1514, 1630, 1723
BccI CCATC 3 cut(s) 717, 1423, 1681
BceAI ACGGC 2 cut(s) 124, 1190
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BciT130I CCWGG 1 cut(s) 173
BciVI GTATCC 1 cut(s) 665
BcnI CCSGG 1 cut(s) 1866
BcoDI GTCTC 3 cut(s) 380, 906, 1514
BcuI ACTAGT 1 cut(s) 1330
BfaI CTAG 6 cut(s) 225, 396, 549, 1058, 1133, 1331
BfuI GTATCC 1 cut(s) 665
BisI GCNGC 6 cut(s) 309, 312, 1493, 1503, 1644, 1712
BlsI GCNGC 6 cut(s) 310, 313, 1494, 1504, 1645, 1713
BmcAI AGTACT 2 cut(s) 464, 824
Bme1390I CCNGG 2 cut(s) 173, 1866
Bme18I GGWCC 2 cut(s) 1423, 1862
BmeRI GACNNNNNGTC 1 cut(s) 249
BmeT110I CYCGRG 1 cut(s) 208
BmgBI CACGTC 1 cut(s) 1010
BmgT120I GGNCC 5 cut(s) 292, 293, 1080, 1423, 1862
BmiI GGNNCC 3 cut(s) 294, 456, 1081
BmrFI CCNGG 2 cut(s) 173, 1866
BmsI GCATC 6 cut(s) 394, 474, 850, 853, 1293, 1723
BpiI GAAGAC 3 cut(s) 90, 574, 1848
Bpu10I CCTNAGC 1 cut(s) 504
BpuEI CTTGAG 2 cut(s) 1244, 1307
BpuMI CCSGG 1 cut(s) 1866
Bsa29I ATCGAT 1 cut(s) 1021
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 906
BsaJI CCNNGG 6 cut(s) 171, 813, 1266, 1419, 1802, 1858
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 1815, 1845
Bsc4I CCNNNNNNNGG 8 cut(s) 175, 390, 922, 923, 1420, 1612, 1683, 1864
Bse1I ACTGG 1 cut(s) 249
Bse3DI GCAATG 2 cut(s) 762, 1634
BseBI CCWGG 1 cut(s) 173
BseCI ATCGAT 1 cut(s) 1021
BseDI CCNNGG 6 cut(s) 171, 813, 1266, 1419, 1802, 1858
BseGI GGATG 7 cut(s) 184, 245, 343, 1309, 1415, 1692, 1699
BseLI CCNNNNNNNGG 8 cut(s) 175, 390, 922, 923, 1420, 1612, 1683, 1864
BseMI GCAATG 2 cut(s) 762, 1634
BseMII CTCAG 1 cut(s) 731
BseNI ACTGG 1 cut(s) 249
BseRI GAGGAG 4 cut(s) 59, 128, 1133, 1850
BseSI GKGCMC 2 cut(s) 296, 438
BseXI GCAGC 6 cut(s) 298, 320, 1479, 1514, 1630, 1723
BseYI CCCAGC 1 cut(s) 627
BsgI GTGCAG 1 cut(s) 297
Bsh1236I CGCG 2 cut(s) 559, 573
BshFI GGCC 6 cut(s) 294, 622, 1082, 1676, 1740, 1857
BshVI ATCGAT 1 cut(s) 1021
BsiHKCI CYCGRG 1 cut(s) 208
BsiSI CCGG 2 cut(s) 335, 1865
BslFI GGGAC 1 cut(s) 644
BslI CCNNNNNNNGG 8 cut(s) 175, 390, 922, 923, 1420, 1612, 1683, 1864
BsmAI GTCTC 3 cut(s) 380, 906, 1514
BsmBI CGTCTC 1 cut(s) 380
BsmFI GGGAC 1 cut(s) 644
BsmI GAATGC 4 cut(s) 415, 475, 1385, 1577
BsnI GGCC 6 cut(s) 294, 622, 1082, 1676, 1740, 1857
Bso31I GGTCTC 1 cut(s) 906
BsoBI CYCGRG 1 cut(s) 208
Bsp120I GGGCCC 1 cut(s) 292
Bsp1286I GDGCHC 2 cut(s) 296, 438
Bsp143I GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
Bsp19I CCATGG 3 cut(s) 813, 1802, 1858
BspACI CCGC 7 cut(s) 97, 407, 573, 578, 1106, 1495, 1778
BspANI GGCC 6 cut(s) 294, 622, 1082, 1676, 1740, 1857
BspCNI CTCAG 1 cut(s) 730
BspDI ATCGAT 1 cut(s) 1021
BspFNI CGCG 2 cut(s) 559, 573
BspLI GGNNCC 3 cut(s) 294, 456, 1081
BspPI GGATC 4 cut(s) 449, 462, 1064, 1241
BspTNI GGTCTC 1 cut(s) 906
BsrDI GCAATG 2 cut(s) 762, 1634
BsrI ACTGG 1 cut(s) 249
BssECI CCNNGG 6 cut(s) 171, 813, 1266, 1419, 1802, 1858
BssMI GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 5 cut(s) 813, 1266, 1419, 1802, 1858
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 3 cut(s) 635, 1053, 1318
BstACI GRCGYC 1 cut(s) 159
BstAPI GCANNNNNTGC 1 cut(s) 1489
BstC8I GCNNGC 3 cut(s) 101, 1296, 1641
BstDEI CTNAG 3 cut(s) 504, 717, 1526
BstDSI CCRYGG 3 cut(s) 813, 1802, 1858
BstF5I GGATG 7 cut(s) 184, 245, 343, 1309, 1415, 1692, 1699
BstFNI CGCG 2 cut(s) 559, 573
BstHHI GCGC 2 cut(s) 370, 559
BstKTI GATC 8 cut(s) 123, 457, 754, 1025, 1072, 1249, 1285, 1518
BstMAI GTCTC 3 cut(s) 380, 906, 1514
BstMBI GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
BstMWI GCNNNNNNNGC 5 cut(s) 291, 722, 1112, 1489, 1708
BstNI CCWGG 1 cut(s) 173
BstNSI RCATGY 1 cut(s) 1563
BstSCI CCNGG 2 cut(s) 171, 1864
BstSLI GKGCMC 2 cut(s) 296, 438
BstUI CGCG 2 cut(s) 559, 573
BstV1I GCAGC 6 cut(s) 298, 320, 1479, 1514, 1630, 1723
BstV2I GAAGAC 3 cut(s) 90, 574, 1848
BstX2I RGATCY 2 cut(s) 454, 1246
BstXI CCANNNNNNTGG 1 cut(s) 1853
BstYI RGATCY 2 cut(s) 454, 1246
Bsu15I ATCGAT 1 cut(s) 1021
BsuI GTATCC 1 cut(s) 665
BsuRI GGCC 6 cut(s) 294, 622, 1082, 1676, 1740, 1857
BsuTUI ATCGAT 1 cut(s) 1021
BtgI CCRYGG 3 cut(s) 813, 1802, 1858
BtrI CACGTC 1 cut(s) 1010
BtsCI GGATG 7 cut(s) 184, 245, 343, 1309, 1415, 1692, 1699
Cac8I GCNNGC 3 cut(s) 101, 1296, 1641
CaiI CAGNNNCTG 1 cut(s) 191
CfoI GCGC 2 cut(s) 370, 559
Cfr13I GGNCC 5 cut(s) 292, 293, 1080, 1423, 1862
ClaI ATCGAT 1 cut(s) 1021
CseI GACGC 2 cut(s) 167, 579
Csp6I GTAC 3 cut(s) 463, 823, 1343
CviQI GTAC 3 cut(s) 463, 823, 1343
DdeI CTNAG 3 cut(s) 504, 717, 1526
DpnI GATC 8 cut(s) 122, 456, 753, 1024, 1071, 1248, 1284, 1517
DpnII GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
DrdI GACNNNNNNGTC 1 cut(s) 1014
DriI GACNNNNNGTC 1 cut(s) 249
DseDI GACNNNNNNGTC 1 cut(s) 1014
EaeI YGGCCR 3 cut(s) 1674, 1738, 1855
Eam1105I GACNNNNNGTC 1 cut(s) 249
Eco130I CCWWGG 5 cut(s) 813, 1266, 1419, 1802, 1858
Eco24I GRGCYC 1 cut(s) 296
Eco31I GGTCTC 1 cut(s) 906
Eco47I GGWCC 2 cut(s) 1423, 1862
Eco57I CTGAAG 2 cut(s) 38, 1167
Eco88I CYCGRG 1 cut(s) 208
EcoO109I RGGNCCY 2 cut(s) 292, 293
EcoRI GAATTC 1 cut(s) 353
EcoRII CCWGG 1 cut(s) 171
EcoT14I CCWWGG 5 cut(s) 813, 1266, 1419, 1802, 1858
EcoT22I ATGCAT 2 cut(s) 1129, 1387
EcoT38I GRGCYC 1 cut(s) 296
ErhI CCWWGG 5 cut(s) 813, 1266, 1419, 1802, 1858
Esp3I CGTCTC 1 cut(s) 380
FaqI GGGAC 1 cut(s) 644
FauI CCCGC 1 cut(s) 1488
Fnu4HI GCNGC 6 cut(s) 309, 312, 1493, 1503, 1644, 1712
FokI GGATG 7 cut(s) 191, 232, 350, 1296, 1402, 1699, 1706
FriOI GRGCYC 1 cut(s) 296
Fsp4HI GCNGC 6 cut(s) 309, 312, 1493, 1503, 1644, 1712
FspAI RTGCGCAY 1 cut(s) 369
FspBI CTAG 6 cut(s) 225, 396, 549, 1058, 1133, 1331
FspI TGCGCA 1 cut(s) 369
GlaI GCGC 2 cut(s) 369, 558
GluI GCNGC 6 cut(s) 309, 312, 1493, 1503, 1644, 1712
GsaI CCCAGC 1 cut(s) 631
HaeIII GGCC 6 cut(s) 294, 622, 1082, 1676, 1740, 1857
HapII CCGG 2 cut(s) 335, 1865
HgaI GACGC 2 cut(s) 167, 579
HhaI GCGC 2 cut(s) 370, 559
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 2 cut(s) 368, 557
HinP1I GCGC 2 cut(s) 368, 557
HinfI GANTC 9 cut(s) 59, 182, 492, 529, 731, 800, 1410, 1522, 1790
HpaII CCGG 2 cut(s) 335, 1865
HphI GGTGA 7 cut(s) 229, 413, 851, 904, 938, 1120, 1525
Hpy166II GTNNAC 2 cut(s) 912, 1365
Hpy188I TCNGA 7 cut(s) 18, 64, 187, 720, 1147, 1588, 1621
Hpy188III TCNNGA 8 cut(s) 347, 549, 868, 1223, 1324, 1475, 1519, 1874
Hpy8I GTNNAC 2 cut(s) 912, 1365
Hpy99I CGWCG 5 cut(s) 92, 149, 152, 161, 167
HpyAV CCTTC 6 cut(s) 25, 306, 448, 665, 1345, 1814
HpyCH4III ACNGT 3 cut(s) 635, 1053, 1318
HpyCH4IV ACGT 3 cut(s) 1009, 1138, 1443
HpyF10VI GCNNNNNNNGC 5 cut(s) 291, 722, 1112, 1489, 1708
HpyF3I CTNAG 3 cut(s) 504, 717, 1526
HpySE526I ACGT 3 cut(s) 1009, 1138, 1443
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 2 cut(s) 368, 557
Kzo9I GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
LmnI GCTCC 4 cut(s) 46, 613, 1750, 1823
Lsp1109I GCAGC 6 cut(s) 298, 320, 1479, 1514, 1630, 1723
LweI GCATC 6 cut(s) 394, 474, 850, 853, 1293, 1723
MaeI CTAG 6 cut(s) 225, 396, 549, 1058, 1133, 1331
MaeII ACGT 3 cut(s) 1009, 1138, 1443
MaeIII GTNAC 3 cut(s) 601, 1053, 1797
MalI GATC 8 cut(s) 122, 456, 753, 1024, 1071, 1248, 1284, 1517
MboI GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
MfeI CAATTG 1 cut(s) 53
MflI RGATCY 2 cut(s) 454, 1246
MhlI GDGCHC 2 cut(s) 296, 438
MlsI TGGCCA 3 cut(s) 1676, 1740, 1857
MluCI AATT 6 cut(s) 53, 353, 1186, 1478, 1487, 1657
MluNI TGGCCA 3 cut(s) 1676, 1740, 1857
MlyI GAGTC 3 cut(s) 191, 1516, 1799
MmeI TCCRAC 1 cut(s) 591
Mox20I TGGCCA 3 cut(s) 1676, 1740, 1857
Mph1103I ATGCAT 2 cut(s) 1129, 1387
MroXI GAANNNNTTC 2 cut(s) 593, 654
MscI TGGCCA 3 cut(s) 1676, 1740, 1857
MseI TTAA 5 cut(s) 324, 411, 828, 921, 1434
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 3 cut(s) 1676, 1740, 1857
MspA1I CMGCKG 2 cut(s) 311, 1510
MspI CCGG 2 cut(s) 335, 1865
MspR9I CCNGG 2 cut(s) 173, 1866
MunI CAATTG 1 cut(s) 53
Mva1269I GAATGC 4 cut(s) 415, 475, 1385, 1577
MvaI CCWGG 1 cut(s) 173
MvnI CGCG 2 cut(s) 559, 573
MwoI GCNNNNNNNGC 5 cut(s) 291, 722, 1112, 1489, 1708
NciI CCSGG 1 cut(s) 1866
NcoI CCATGG 3 cut(s) 813, 1802, 1858
NdeII GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
NlaIV GGNNCC 3 cut(s) 294, 456, 1081
NmeAIII GCCGAG 1 cut(s) 409
NmuCI GTSAC 2 cut(s) 601, 1053
NsbI TGCGCA 1 cut(s) 369
NsiI ATGCAT 2 cut(s) 1129, 1387
NspI RCATGY 1 cut(s) 1563
PaeR7I CTCGAG 1 cut(s) 208
PcsI WCGNNNNNNNCGW 2 cut(s) 153, 162
PctI GAATGC 4 cut(s) 415, 475, 1385, 1577
PdmI GAANNNNTTC 2 cut(s) 593, 654
PfeI GAWTC 6 cut(s) 59, 492, 529, 731, 800, 1410
PflMI CCANNNNNTGG 1 cut(s) 1612
PkrI GCNGC 6 cut(s) 310, 313, 1494, 1504, 1645, 1713
PleI GAGTC 3 cut(s) 190, 1516, 1798
PpsI GAGTC 3 cut(s) 190, 1516, 1798
Psp1406I AACGTT 1 cut(s) 1138
Psp6I CCWGG 1 cut(s) 171
PspFI CCCAGC 1 cut(s) 627
PspGI CCWGG 1 cut(s) 171
PspN4I GGNNCC 3 cut(s) 294, 456, 1081
PspOMI GGGCCC 1 cut(s) 292
PspPI GGNCC 5 cut(s) 292, 293, 1080, 1423, 1862
PspXI VCTCGAGB 1 cut(s) 208
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 2 cut(s) 454, 1246
PvuII CAGCTG 2 cut(s) 311, 1510
RsaI GTAC 3 cut(s) 464, 824, 1344
RsaNI GTAC 3 cut(s) 463, 823, 1343
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 5 cut(s) 324, 411, 828, 921, 1434
SatI GCNGC 6 cut(s) 309, 312, 1493, 1503, 1644, 1712
Sau3AI GATC 8 cut(s) 120, 454, 751, 1022, 1069, 1246, 1282, 1515
Sau96I GGNCC 5 cut(s) 292, 293, 1080, 1423, 1862
ScaI AGTACT 2 cut(s) 464, 824
SchI GAGTC 3 cut(s) 191, 1516, 1799
ScrFI CCNGG 2 cut(s) 173, 1866
SduI GDGCHC 2 cut(s) 296, 438
SfaNI GCATC 6 cut(s) 394, 474, 850, 853, 1293, 1723
Sfr274I CTCGAG 1 cut(s) 208
SinI GGWCC 2 cut(s) 1423, 1862
SlaI CTCGAG 1 cut(s) 208
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 3 cut(s) 208, 1223, 1322
SmoI CTYRAG 3 cut(s) 208, 1223, 1322
SpeI ACTAGT 1 cut(s) 1330
Sse9I AATT 6 cut(s) 53, 353, 1186, 1478, 1487, 1657
SsiI CCGC 7 cut(s) 97, 407, 573, 578, 1106, 1495, 1778
SspMI CTAG 6 cut(s) 225, 396, 549, 1058, 1133, 1331
StyD4I CCNGG 2 cut(s) 171, 1864
StyI CCWWGG 5 cut(s) 813, 1266, 1419, 1802, 1858
TaaI ACNGT 3 cut(s) 635, 1053, 1318
TaiI ACGT 3 cut(s) 1012, 1141, 1446
TaqI TCGA 7 cut(s) 132, 209, 242, 869, 1021, 1518, 1765
TasI AATT 6 cut(s) 53, 353, 1186, 1478, 1487, 1657
TatI WGTACW 2 cut(s) 462, 822
TfiI GAWTC 6 cut(s) 59, 492, 529, 731, 800, 1410
Tru1I TTAA 5 cut(s) 324, 411, 828, 921, 1434
Tru9I TTAA 5 cut(s) 324, 411, 828, 921, 1434
TseFI GTSAC 2 cut(s) 601, 1053
TseI GCWGC 6 cut(s) 308, 311, 1492, 1502, 1643, 1711
Tsp45I GTSAC 2 cut(s) 601, 1053
TspGWI ACGGA 1 cut(s) 597
Van91I CCANNNNNTGG 1 cut(s) 1612
VpaK11BI GGWCC 2 cut(s) 1423, 1862
XapI RAATTY 3 cut(s) 353, 1186, 1657
XbaI TCTAGA 1 cut(s) 548
XceI RCATGY 1 cut(s) 1563
XcmI CCANNNNNNNNNTGG 1 cut(s) 1684
XhoI CTCGAG 1 cut(s) 208
XmnI GAANNNNTTC 2 cut(s) 593, 654
XspI CTAG 6 cut(s) 225, 396, 549, 1058, 1133, 1331
ZrmI AGTACT 2 cut(s) 464, 824
Zsp2I ATGCAT 2 cut(s) 1129, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.