Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0006650

Physical Location & Seq

Genomic Coordinates Reverse (-)

29740488 .. 29744146

Gene Structure 3659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1200800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2817 bp

ATGGATTTATTAAGTATGGTGGAAATGCCACAGATTCAGGGAGACGTCACATATCAAGGGGCGTCCACAGTTGCTTCTTTCCAATCTCTAAGCCCGGTTGTTTTTGAAGAATCTCAGATTCTTGATTTGGACTCATCTCACCATTTTGAAGTCCTCATTAGTACACAAACAGCAAATGAACCAGAAACCTGTGACTGGATGTTTAGTGGAGACATAAACTTCAATACTTTGATTGTTAGTCATGAGCTAGCCCTGGTCGATGACACATTCAAATCATTGCCCGTGCCTGTTCTCTCTGATCATGAAAAGATATGTTCATCATATGTTGTTATGGAGGAAACACTAACTTACCGCTGCTGCCCCTATCTGCATCAGATAGGATTTACTTGGATTGGCATTTTCTCGAGAAAGATAAATGTAATTGTGTATGATTTTGCTTTCTCCGATGATGCTGTAGAGGAGTTTACTACAGAAGAAAACAAAGAATTACAGGAGTTGCCCTCTGATGGTATTCCTATGCTTGCTGGTCATCTTGGAGATACTTCAGCCGAATTGTCAGGCAGCACTTTTGCACAGAAAAAAAATGGAGAGCAGATTGATAAAAGAGGTGCTGAGAGGGCTTCCTCACTTTTCAAGTCTATGTCACGATTCAATGATATCGACTTTTTCTTGAATCCCCAGAAGGCCTCTACAGGTGGAAACAGTAATTGTGCAGTTACCACAGTTGCTAATGCTACATTTCCAAAGGGAGAGCAGTCTTATTCTATATCTCCTCCAGTTGTGAACATGAATGATCAGCAATCAGAGGAACTCTTGGACATTTTTCCTGGTCATGAAAAGAATGATATGACATATAAAGAAGGTGCAGATGAAGAAGAAGCTAGCAGTATGCCCCTACCTAATCTTTCTATGCCATCTGCAATGGAAGCTGAGCTTTTTCAGCACAGCATGGCTTCTTTCCCTGAGATTGTCATTGTTGTAAACACTCAAAATCTTGATAAGGAAGTGATAGTGTCTAGAAGAAGTACCTACAAAAAAAATTCTTGCAATGGAGAAAGAAGGGTGTGGTATGACTGCAAAAACATTGGACAGAAAGCAACCACTCTTGATGAAGCTTCTTCATACTTACCTCTGTGCATTGAGAACATTGCCACAAATGTTTTGACGTTGCTGAGTTTCACTTTCAGTGGCTGCTTTATGCTTTTCAACTCGTATTCATCTGAGTTGACTGATGAAATTGTACTGAGCTGCATGGGACATGCCCCGAAGTTGACAAGGTTTATGTATCCTCGAATGCCTGAGTTGGAAAGTCTTGCAGAATCATTCCTTACCAAACTTCCTTCAGTAAATGCTTTGACAGCTCATGCAATACTGTCTTCAGGAGGCTTGCTCAAAGAGTTTCTTGAATCGTCCCATGAAACCAGGATGAGTGTACTCCAAAAATATCACGTTCCTGATGAAAGTATCACACTATTTAGTGCTTTATGCAAATATGGTGAACCGGCAGATTCTAAATCAATTATGACAGACTGCTCCTCTTCAGTGTCTTCAAGTCCGGACTCAGGAAGATATAATTTGAATATTGTTTCGGAAAGAAAGAAGCGAAAATACAATGGTAGTCCTGACAAATATGAGTTACCAACGAATGAATTCTTGCACCTGGAGCCGTTCAACCAATTCAGTACCCGCATCTTGCATCCTTCAACAGCTTCCAAGCTAACTGATTCATGTATGTCAAAAAGCCCCAAAATAATTGATAGAGGTTTGGATATGGATATGATGATGTATCCTTCTAAGGTTTTCAAGCCATATGATTCTCAAATCTCCAAAGGGCCTCAGGTATTAAACGAGATAAAAAGGTCCTGTTCATCGTTGAAGGATAAGCTGTCAGGTCAGAAACGGGGATCAGATATGCCTATCATGAAGAATTTTGATTGCTATAACAAGAAGAACACTGAAGTTCTGCATGAGGACCTAAAAGGGGAAGTTATTGACCTAACAGACAGTCTTGTATTAGATGAGGACTTTTCTTTTATTGGCAACTCCATGAACTTCTCATCTCAGATGCCTGAGTTGGAAATGGATTCCACAAGGAGGTCTAAAGCTGCAAGAAAATTGTCATTTGCTTCGAGCAGTCGCCTTACTTTCCCAACAGCTGCTGAAATCAACTCAACTCCAACTGTTTGGTGTTCTGCAGAAGGCCTGAGAAAAATTTCGCAAGTTGGAGCAACAATTACTCAGATACAGATCTCGAACATGATTTCTGGGGGAAAATCCCAAGGGATACATTTTCACGAGAATGATATATCACCTTATGGACGAAAGCAAGGGCTACATATCTACCAGAATGATATATCACATTATGGTGGAACACCACTCTCAAAAGCTCTTCGCTCAGGCAGTTCACAGCAAAATACTCCCTGGACAATAGAGTTTCTGAACAGAATCAAGGAAAAGAGCAGGTTGCGTCAGCAGTCCCTTCCTGGTGACTTAACCGGCCCTAATTTGGGTTATCCAGGGAATGTATCGAAGGTTACCAAGAGAAGAAGTCAGTCTATTCTTGATTTTTACAAGTACCAAGGTGGCAACACTCCAAGAAAATTACCAGAAGGAAAGAGGCAGAAGCGACCTTTACAATCTTCAAGGTCACCCAAAAATGAAAATAACTCAGCTCCTCCCCTTACTGCGTGGACACCTCTTGACAAAAGAGCAAGACAGACACTATCTTTTGCAACGAATGATAGTGGAAACCCAACTAAGCTGGCGTGGAGTGATGGAGGTCATGGAGTCGGGAAAATGTTTCAGATTCAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0005575 GO:0005911 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0030054 GO:0034641 GO:0035825 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0046483 GO:0048285 GO:0051304 GO:0051307 GO:0051321 GO:0055044 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

939

Amino Acids

104.51

Weight (kDa)

5.72

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52290
fragaria_vesca	FvH4_7g29470 FvH4_7g29470
malus_domestica	MD01G1200800.v1.1 MD01G1200900.v1.1 MD07G1268700.v1.1
prunus_persica	Prupe.2G294300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0377251
rosa_laevigata	RLG00000007673 RLG00000026528 RLG00000026529 RLG00000026531 RLG00000035471
rosa_multiflora	Rmu_sc0000689.1_g000011 Rmu_sc0009231.1_g000001 Rmu_sc0017163.1_g000002 Rmu_sc0022060.1_g000002
rosa_roxburghii	Rroxscaffold_4G00281340
rosa_rugosa	Rorug01G0402700 Rorug01G0402700
rosa_samantha	Rh1AG419900 Rh1BG378900 Rh1CG392900 Rh1DG409500 Rh1DG409900
rosa_wichuraiana	Rw1G036840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	48
Acc36I	ACCTGC	1 cut(s)	2451
AccIII	TCCGGA	1 cut(s)	1555
AciI	CCGC	2 cut(s)	352, 1687
AclWI	GGATC	1 cut(s)	1912
AcsI	RAATTY	4 cut(s)	1039, 1649, 1927, 2211
AcuI	CTGAAG	5 cut(s)	528, 1326, 1362, 1524, 1977
AcyI	GRCGYC	2 cut(s)	45, 62
AfaI	GTAC	6 cut(s)	163, 1027, 1242, 1434, 1684, 2576
AfiI	CCNNNNNNNGG	7 cut(s)	195, 506, 1562, 1981, 2094, 2506, 2507
AjnI	CCWGG	7 cut(s)	252, 826, 1421, 1659, 2420, 2482, 2515
Alw26I	GTCTC	2 cut(s)	36, 204
AlwI	GGATC	1 cut(s)	1912
AlwNI	CAGNNNCTG	2 cut(s)	1191, 2159
Ama87I	CYCGRG	1 cut(s)	403
Aor13HI	TCCGGA	1 cut(s)	1555
AoxI	GGCC	4 cut(s)	684, 1832, 2200, 2497
ApeKI	GCWGC	7 cut(s)	354, 357, 561, 1191, 1248, 2105, 2156
ApoI	RAATTY	4 cut(s)	1039, 1649, 1927, 2211
Asp700I	GAANNNNTTC	2 cut(s)	1649, 2212
AspS9I	GGNCC	4 cut(s)	1832, 1860, 1972, 2498
AsuC2I	CCSGG	1 cut(s)	95
AsuHPI	GGTGA	5 cut(s)	131, 1508, 2301, 2498, 2640
AsuNHI	GCTAGC	2 cut(s)	247, 881
AvaI	CYCGRG	1 cut(s)	403
AvaII	GGWCC	2 cut(s)	1860, 1972
AxyI	CCTNAGG	1 cut(s)	1836
BarI	GAAGNNNNNNTAC	2 cut(s)	1592, 1624
BauI	CACGAG	1 cut(s)	2294
BbsI	GAAGAC	2 cut(s)	1368, 1539
BbvI	GCAGC	7 cut(s)	341, 344, 573, 1178, 1235, 2092, 2143
BccI	CCATC	3 cut(s)	500, 922, 2768
BceAI	ACGGC	1 cut(s)	1651
BciT130I	CCWGG	7 cut(s)	254, 828, 1423, 1661, 2422, 2484, 2517
BciVI	GTATCC	3 cut(s)	1296, 1797, 2277
BclI	TGATCA	2 cut(s)	298, 793
BcnI	CCSGG	1 cut(s)	95
BcoDI	GTCTC	2 cut(s)	36, 204
BfaI	CTAG	3 cut(s)	248, 882, 1017
BfmI	CTRYAG	4 cut(s)	453, 468, 690, 2193
BfuAI	ACCTGC	1 cut(s)	2451
BfuI	GTATCC	3 cut(s)	1296, 1797, 2277
BglII	AGATCT	1 cut(s)	2247
BisI	GCNGC	7 cut(s)	355, 358, 562, 1192, 1249, 2106, 2157
BlpI	GCTNAGC	1 cut(s)	930
BlsI	GCNGC	7 cut(s)	356, 359, 563, 1193, 1250, 2107, 2158
Bme1390I	CCNGG	8 cut(s)	95, 254, 828, 1423, 1661, 2422, 2484, 2517
Bme18I	GGWCC	2 cut(s)	1860, 1972
BmeT110I	CYCGRG	1 cut(s)	403
BmgT120I	GGNCC	4 cut(s)	1832, 1860, 1972, 2498
BmiI	GGNNCC	1 cut(s)	1665
BmrFI	CCNGG	8 cut(s)	95, 254, 828, 1423, 1661, 2422, 2484, 2517
BmsI	GCATC	5 cut(s)	379, 439, 1698, 1705, 2055
BmtI	GCTAGC	2 cut(s)	251, 885
BpiI	GAAGAC	2 cut(s)	1368, 1539
BplI	GAGNNNNNCTC	4 cut(s)	485, 517, 1374, 1406
BpmI	CTGGAG	2 cut(s)	759, 1682
Bpu10I	CCTNAGC	1 cut(s)	2395
Bpu1102I	GCTNAGC	1 cut(s)	930
BpuMI	CCSGG	1 cut(s)	95
BsaBI	GATNNNNATC	1 cut(s)	2246
BsaHI	GRCGYC	2 cut(s)	45, 62
BsaJI	CCNNGG	5 cut(s)	252, 2278, 2420, 2516, 2578
BsaWI	WCCGGW	1 cut(s)	1555
Bsc4I	CCNNNNNNNGG	7 cut(s)	195, 506, 1562, 1981, 2094, 2506, 2507
Bse118I	RCCGGY	2 cut(s)	1501, 2495
Bse1I	ACTGG	2 cut(s)	200, 776
Bse21I	CCTNAGG	1 cut(s)	1836
Bse3DI	GCAATG	4 cut(s)	275, 927, 1054, 1146
Bse8I	GATNNNNATC	1 cut(s)	2246
BseAI	TCCGGA	1 cut(s)	1555
BseBI	CCWGG	7 cut(s)	254, 828, 1423, 1661, 2422, 2484, 2517
BseDI	CCNNGG	5 cut(s)	252, 2278, 2420, 2516, 2578
BseGI	GGATG	3 cut(s)	204, 1431, 1696
BseJI	GATNNNNATC	1 cut(s)	2246
BseLI	CCNNNNNNNGG	7 cut(s)	195, 506, 1562, 1981, 2094, 2506, 2507
BseMI	GCAATG	4 cut(s)	275, 927, 1054, 1146
BseNI	ACTGG	2 cut(s)	200, 776
BseRI	GAGGAG	4 cut(s)	473, 762, 1525, 2664
BseXI	GCAGC	7 cut(s)	341, 344, 573, 1178, 1235, 2092, 2143
BsgI	GTGCAG	2 cut(s)	732, 885
BshFI	GGCC	4 cut(s)	686, 1834, 2202, 2499
BsiHKCI	CYCGRG	1 cut(s)	403
BsiSI	CCGG	4 cut(s)	95, 1502, 1556, 2496
BslFI	GGGAC	3 cut(s)	1269, 1396, 2461
BslI	CCNNNNNNNGG	7 cut(s)	195, 506, 1562, 1981, 2094, 2506, 2507
BsmAI	GTCTC	2 cut(s)	36, 204
BsmBI	CGTCTC	1 cut(s)	36
BsmFI	GGGAC	3 cut(s)	1269, 1396, 2461
BsmI	GAATGC	1 cut(s)	1299
BsnI	GGCC	4 cut(s)	686, 1834, 2202, 2499
BsoBI	CYCGRG	1 cut(s)	403
Bsp13I	TCCGGA	1 cut(s)	1555
Bsp143I	GATC	4 cut(s)	298, 793, 1904, 2247
Bsp1720I	GCTNAGC	1 cut(s)	930
BspACI	CCGC	2 cut(s)	352, 1687
BspANI	GGCC	4 cut(s)	686, 1834, 2202, 2499
BspEI	TCCGGA	1 cut(s)	1555
BspHI	TCATGA	4 cut(s)	241, 301, 832, 1920
BspLI	GGNNCC	1 cut(s)	1665
BspMAI	CTGCAG	1 cut(s)	2197
BspMI	ACCTGC	1 cut(s)	2451
BspOI	GCTAGC	2 cut(s)	251, 885
BspPI	GGATC	1 cut(s)	1912
BspQI	GCTCTTC	1 cut(s)	2394
BsrDI	GCAATG	4 cut(s)	275, 927, 1054, 1146
BsrFI	RCCGGY	2 cut(s)	1501, 2495
BsrI	ACTGG	2 cut(s)	200, 776
BssAI	RCCGGY	2 cut(s)	1501, 2495
BssECI	CCNNGG	5 cut(s)	252, 2278, 2420, 2516, 2578
BssMI	GATC	4 cut(s)	298, 793, 1904, 2247
BssNI	GRCGYC	2 cut(s)	45, 62
BssSI	CACGAG	1 cut(s)	2294
BssT1I	CCWWGG	2 cut(s)	2278, 2578
Bst2BI	CACGAG	1 cut(s)	2294
Bst2UI	CCWGG	7 cut(s)	254, 828, 1423, 1661, 2422, 2484, 2517
Bst4CI	ACNGT	6 cut(s)	70, 704, 724, 1374, 2006, 2182
Bst6I	CTCTTC	2 cut(s)	1543, 2394
BstACI	GRCGYC	2 cut(s)	45, 62
BstC8I	GCNNGC	5 cut(s)	249, 522, 883, 1388, 2763
BstEII	GGTNACC	2 cut(s)	2533, 2646
BstF5I	GGATG	3 cut(s)	204, 1431, 1696
BstKTI	GATC	4 cut(s)	301, 796, 1907, 2250
BstMAI	GTCTC	2 cut(s)	36, 204
BstMBI	GATC	4 cut(s)	298, 793, 1904, 2247
BstMWI	GCNNNNNNNGC	5 cut(s)	617, 926, 940, 1358, 1663
BstNI	CCWGG	7 cut(s)	254, 828, 1423, 1661, 2422, 2484, 2517
BstNSI	RCATGY	1 cut(s)	1262
BstPI	GGTNACC	2 cut(s)	2533, 2646
BstSCI	CCNGG	8 cut(s)	93, 252, 826, 1421, 1659, 2420, 2482, 2515
BstSFI	CTRYAG	4 cut(s)	453, 468, 690, 2193
BstV1I	GCAGC	7 cut(s)	341, 344, 573, 1178, 1235, 2092, 2143
BstV2I	GAAGAC	2 cut(s)	1368, 1539
BstX2I	RGATCY	1 cut(s)	2247
BstXI	CCANNNNNNTGG	1 cut(s)	2184
BstYI	RGATCY	1 cut(s)	2247
Bsu36I	CCTNAGG	1 cut(s)	1836
BsuI	GTATCC	3 cut(s)	1296, 1797, 2277
BsuRI	GGCC	4 cut(s)	686, 1834, 2202, 2499
BtsCI	GGATG	3 cut(s)	204, 1431, 1696
BtsIMutI	CAGTG	3 cut(s)	1192, 1548, 1953
BveI	ACCTGC	1 cut(s)	2451
Cac8I	GCNNGC	5 cut(s)	249, 522, 883, 1388, 2763
CaiI	CAGNNNCTG	2 cut(s)	1191, 2159
CciI	TCATGA	4 cut(s)	241, 301, 832, 1920
Cfr10I	RCCGGY	2 cut(s)	1501, 2495
Cfr13I	GGNCC	4 cut(s)	1832, 1860, 1972, 2498
CseI	GACGC	2 cut(s)	51, 2456
Csp6I	GTAC	6 cut(s)	162, 1026, 1241, 1433, 1683, 2575
CviQI	GTAC	6 cut(s)	162, 1026, 1241, 1433, 1683, 2575
DpnI	GATC	4 cut(s)	300, 795, 1906, 2249
DpnII	GATC	4 cut(s)	298, 793, 1904, 2247
Eam1104I	CTCTTC	2 cut(s)	1543, 2394
EarI	CTCTTC	2 cut(s)	1543, 2394
Eco130I	CCWWGG	2 cut(s)	2278, 2578
Eco147I	AGGCCT	2 cut(s)	686, 2202
Eco32I	GATATC	1 cut(s)	658
Eco47I	GGWCC	2 cut(s)	1860, 1972
Eco57I	CTGAAG	5 cut(s)	528, 1326, 1362, 1524, 1977
Eco81I	CCTNAGG	1 cut(s)	1836
Eco88I	CYCGRG	1 cut(s)	403
Eco91I	GGTNACC	2 cut(s)	2533, 2646
EcoO109I	RGGNCCY	3 cut(s)	1832, 1860, 1972
EcoO65I	GGTNACC	2 cut(s)	2533, 2646
EcoRI	GAATTC	1 cut(s)	1649
EcoRII	CCWGG	7 cut(s)	252, 826, 1421, 1659, 2420, 2482, 2515
EcoRV	GATATC	1 cut(s)	658
EcoT14I	CCWWGG	2 cut(s)	2278, 2578
ErhI	CCWWGG	2 cut(s)	2278, 2578
Esp3I	CGTCTC	1 cut(s)	36
FalI	AAGNNNNNCTT	4 cut(s)	918, 950, 1386, 1418
FaqI	GGGAC	3 cut(s)	1269, 1396, 2461
FauI	CCCGC	1 cut(s)	1694
FauNDI	CATATG	2 cut(s)	322, 1810
FbaI	TGATCA	2 cut(s)	298, 793
Fnu4HI	GCNGC	7 cut(s)	355, 358, 562, 1192, 1249, 2106, 2157
FokI	GGATG	3 cut(s)	211, 1438, 1683
Fsp4HI	GCNGC	7 cut(s)	355, 358, 562, 1192, 1249, 2106, 2157
FspBI	CTAG	3 cut(s)	248, 882, 1017
GluI	GCNGC	7 cut(s)	355, 358, 562, 1192, 1249, 2106, 2157
GsuI	CTGGAG	2 cut(s)	759, 1682
HaeIII	GGCC	4 cut(s)	686, 1834, 2202, 2499
HapII	CCGG	4 cut(s)	95, 1502, 1556, 2496
HgaI	GACGC	2 cut(s)	51, 2456
Hin1I	GRCGYC	2 cut(s)	45, 62
HincII	GTYRAC	2 cut(s)	1227, 1272
HindII	GTYRAC	2 cut(s)	1227, 1272
HindIII	AAGCTT	1 cut(s)	1113
HpaII	CCGG	4 cut(s)	95, 1502, 1556, 2496
HphI	GGTGA	5 cut(s)	131, 1508, 2301, 2498, 2640
HpyCH4III	ACNGT	6 cut(s)	70, 704, 724, 1374, 2006, 2182
HpyCH4IV	ACGT	3 cut(s)	45, 1166, 1449
HpyF10VI	GCNNNNNNNGC	5 cut(s)	617, 926, 940, 1358, 1663
HpySE526I	ACGT	3 cut(s)	45, 1166, 1449
Hsp92I	GRCGYC	2 cut(s)	45, 62
Kpn2I	TCCGGA	1 cut(s)	1555
Ksp22I	TGATCA	2 cut(s)	298, 793
Kzo9I	GATC	4 cut(s)	298, 793, 1904, 2247
LguI	GCTCTTC	1 cut(s)	2394
LmnI	GCTCC	4 cut(s)	1538, 1663, 2225, 2677
Lsp1109I	GCAGC	7 cut(s)	341, 344, 573, 1178, 1235, 2092, 2143
LweI	GCATC	5 cut(s)	379, 439, 1698, 1705, 2055
MaeI	CTAG	3 cut(s)	248, 882, 1017
MaeII	ACGT	3 cut(s)	45, 1166, 1449
MaeIII	GTNAC	8 cut(s)	46, 191, 642, 715, 1635, 2486, 2533, 2646
MalI	GATC	4 cut(s)	300, 795, 1906, 2249
MboI	GATC	4 cut(s)	298, 793, 1904, 2247
MflI	RGATCY	1 cut(s)	2247
MlyI	GAGTC	3 cut(s)	125, 1553, 2796
MmeI	TCCRAC	4 cut(s)	1284, 2055, 2201, 2203
MroI	TCCGGA	1 cut(s)	1555
MroXI	GAANNNNTTC	2 cut(s)	1649, 2212
MseI	TTAA	3 cut(s)	11, 1844, 2492
MslI	CAYNNNNRTG	2 cut(s)	2298, 2364
MspA1I	CMGCKG	2 cut(s)	354, 2156
MspI	CCGG	4 cut(s)	95, 1502, 1556, 2496
MspR9I	CCNGG	8 cut(s)	95, 254, 828, 1423, 1661, 2422, 2484, 2517
Mva1269I	GAATGC	1 cut(s)	1299
MvaI	CCWGG	7 cut(s)	254, 828, 1423, 1661, 2422, 2484, 2517
MwoI	GCNNNNNNNGC	5 cut(s)	617, 926, 940, 1358, 1663
NciI	CCSGG	1 cut(s)	95
NdeI	CATATG	2 cut(s)	322, 1810
NdeII	GATC	4 cut(s)	298, 793, 1904, 2247
NheI	GCTAGC	2 cut(s)	247, 881
NlaIV	GGNNCC	1 cut(s)	1665
NmuCI	GTSAC	5 cut(s)	46, 191, 642, 2486, 2646
NspI	RCATGY	1 cut(s)	1262
PaeR7I	CTCGAG	1 cut(s)	403
PagI	TCATGA	4 cut(s)	241, 301, 832, 1920
PceI	AGGCCT	2 cut(s)	686, 2202
PciSI	GCTCTTC	1 cut(s)	2394
PctI	GAATGC	1 cut(s)	1299
PdmI	GAANNNNTTC	2 cut(s)	1649, 2212
PkrI	GCNGC	7 cut(s)	356, 359, 563, 1193, 1250, 2107, 2158
PleI	GAGTC	3 cut(s)	125, 1553, 2795
PpsI	GAGTC	3 cut(s)	125, 1553, 2795
PpuMI	RGGWCCY	2 cut(s)	1860, 1972
Psp5II	RGGWCCY	2 cut(s)	1860, 1972
Psp6I	CCWGG	7 cut(s)	252, 826, 1421, 1659, 2420, 2482, 2515
PspEI	GGTNACC	2 cut(s)	2533, 2646
PspGI	CCWGG	7 cut(s)	252, 826, 1421, 1659, 2420, 2482, 2515
PspN4I	GGNNCC	1 cut(s)	1665
PspPI	GGNCC	4 cut(s)	1832, 1860, 1972, 2498
PspPPI	RGGWCCY	2 cut(s)	1860, 1972
PstI	CTGCAG	1 cut(s)	2197
PstNI	CAGNNNCTG	2 cut(s)	1191, 2159
PsuI	RGATCY	1 cut(s)	2247
PvuII	CAGCTG	1 cut(s)	2156
RsaI	GTAC	6 cut(s)	163, 1027, 1242, 1434, 1684, 2576
RsaNI	GTAC	6 cut(s)	162, 1026, 1241, 1433, 1683, 2575
RseI	CAYNNNNRTG	2 cut(s)	2298, 2364
SapI	GCTCTTC	1 cut(s)	2394
SaqAI	TTAA	3 cut(s)	11, 1844, 2492
SatI	GCNGC	7 cut(s)	355, 358, 562, 1192, 1249, 2106, 2157
Sau3AI	GATC	4 cut(s)	298, 793, 1904, 2247
Sau96I	GGNCC	4 cut(s)	1832, 1860, 1972, 2498
SchI	GAGTC	3 cut(s)	125, 1553, 2796
ScrFI	CCNGG	8 cut(s)	95, 254, 828, 1423, 1661, 2422, 2484, 2517
SfaNI	GCATC	5 cut(s)	379, 439, 1698, 1705, 2055
SfcI	CTRYAG	4 cut(s)	453, 468, 690, 2193
Sfr274I	CTCGAG	1 cut(s)	403
SinI	GGWCC	2 cut(s)	1860, 1972
SlaI	CTCGAG	1 cut(s)	403
SmiMI	CAYNNNNRTG	2 cut(s)	2298, 2364
SmlI	CTYRAG	1 cut(s)	403
SmoI	CTYRAG	1 cut(s)	403
SseBI	AGGCCT	2 cut(s)	686, 2202
SsiI	CCGC	2 cut(s)	352, 1687
SspI	AATATT	1 cut(s)	1582
SspMI	CTAG	3 cut(s)	248, 882, 1017
StuI	AGGCCT	2 cut(s)	686, 2202
StyD4I	CCNGG	8 cut(s)	93, 252, 826, 1421, 1659, 2420, 2482, 2515
StyI	CCWWGG	2 cut(s)	2278, 2578
TaaI	ACNGT	6 cut(s)	70, 704, 724, 1374, 2006, 2182
TaiI	ACGT	3 cut(s)	48, 1169, 1452
TaqI	TCGA	7 cut(s)	258, 404, 660, 1291, 2129, 2252, 2528
TatI	WGTACW	3 cut(s)	161, 1240, 1432
Tru1I	TTAA	3 cut(s)	11, 1844, 2492
Tru9I	TTAA	3 cut(s)	11, 1844, 2492
TscAI	CASTG	3 cut(s)	1192, 1548, 1960
TseFI	GTSAC	5 cut(s)	46, 191, 642, 2486, 2646
TseI	GCWGC	7 cut(s)	354, 357, 561, 1191, 1248, 2105, 2156
Tsp45I	GTSAC	5 cut(s)	46, 191, 642, 2486, 2646
TspRI	CASTG	3 cut(s)	1192, 1548, 1960
VpaK11BI	GGWCC	2 cut(s)	1860, 1972
XapI	RAATTY	4 cut(s)	1039, 1649, 1927, 2211
XbaI	TCTAGA	1 cut(s)	1016
XceI	RCATGY	1 cut(s)	1262
XhoI	CTCGAG	1 cut(s)	403
XmnI	GAANNNNTTC	2 cut(s)	1649, 2212
XspI	CTAG	3 cut(s)	248, 882, 1017
ZraI	GACGTC	1 cut(s)	46

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.