No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G52290 |
| fragaria_vesca | FvH4_7g29470 FvH4_7g29470 |
| malus_domestica | MD01G1200800.v1.1 MD01G1200900.v1.1 MD07G1268700.v1.1 |
| prunus_persica | Prupe.2G294300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0377251 |
| rosa_laevigata | RLG00000007673 RLG00000026528 RLG00000026529 RLG00000026531 RLG00000035471 |
| rosa_multiflora | Rmu_sc0000689.1_g000011 Rmu_sc0009231.1_g000001 Rmu_sc0017163.1_g000002 Rmu_sc0022060.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00281340 |
| rosa_rugosa | Rorug01G0402700 Rorug01G0402700 |
| rosa_samantha | Rh1AG419900 Rh1BG378900 Rh1CG392900 Rh1DG409500 Rh1DG409900 |
| rosa_wichuraiana | Rw1G036840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1376 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 754, 3250 |
| AatII | GACGTC | 1 cut(s) | 225 |
| Acc36I | ACCTGC | 3 cut(s) | 1376, 3363, 3849 |
| AccBSI | CCGCTC | 2 cut(s) | 135, 1417 |
| AccI | GTMKAC | 1 cut(s) | 246 |
| AccII | CGCG | 2 cut(s) | 200, 254 |
| AccIII | TCCGGA | 1 cut(s) | 290 |
| AciI | CCGC | 6 cut(s) | 133, 195, 198, 254, 1310, 1415 |
| AclWI | GGATC | 8 cut(s) | 143, 517, 645, 919, 2767, 2780, 3035, 3048 |
| AcoI | YGGCCR | 1 cut(s) | 369 |
| AcsI | RAATTY | 8 cut(s) | 395, 742, 1055, 1670, 2226, 3320, 3443, 3962 |
| AcuI | CTGAAG | 6 cut(s) | 558, 2673, 2871, 2880, 3091, 3359 |
| AcyI | GRCGYC | 1 cut(s) | 222 |
| AfaI | GTAC | 8 cut(s) | 456, 1230, 1930, 2215, 2431, 2954, 3491, 4032 |
| AgeI | ACCGGT | 1 cut(s) | 1709 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 619 |
| AjnI | CCWGG | 3 cut(s) | 1197, 2529, 3818 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1382, 1414 |
| AleI | CACNNNNGTG | 1 cut(s) | 445 |
| Alw21I | GWGCWC | 1 cut(s) | 2254 |
| Alw44I | GTGCAC | 1 cut(s) | 2250 |
| AlwI | GGATC | 8 cut(s) | 143, 517, 645, 919, 2767, 2780, 3035, 3048 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2445, 3551, 3819, 4114 |
| Ama87I | CYCGRG | 2 cut(s) | 920, 3194 |
| Aor13HI | TCCGGA | 1 cut(s) | 290 |
| AoxI | GGCC | 4 cut(s) | 265, 369, 916, 2900 |
| ApaI | GGGCCC | 1 cut(s) | 269 |
| ApaLI | GTGCAC | 1 cut(s) | 2250 |
| ApeKI | GCWGC | 8 cut(s) | 2445, 2516, 2519, 2522, 2545, 2595, 3050, 3497 |
| ApoI | RAATTY | 8 cut(s) | 395, 742, 1055, 1670, 2226, 3320, 3443, 3962 |
| AsiGI | ACCGGT | 1 cut(s) | 1709 |
| AspLEI | GCGC | 3 cut(s) | 202, 3867, 3925 |
| AsuHPI | GGTGA | 5 cut(s) | 25, 95, 184, 1949, 3521 |
| AsuII | TTCGAA | 1 cut(s) | 657 |
| AsuNHI | GCTAGC | 2 cut(s) | 1192, 2069 |
| AvaI | CYCGRG | 2 cut(s) | 920, 3194 |
| AvaII | GGWCC | 8 cut(s) | 679, 924, 2158, 3252, 3296, 3581, 3708, 4178 |
| BaeGI | GKGCMC | 2 cut(s) | 269, 2254 |
| BamHI | GGATCC | 2 cut(s) | 2772, 3040 |
| BanII | GRGCYC | 1 cut(s) | 269 |
| BauI | CACGAG | 2 cut(s) | 471, 3740 |
| BbsI | GAAGAC | 4 cut(s) | 121, 618, 1101, 2886 |
| Bbv12I | GWGCWC | 1 cut(s) | 2254 |
| BbvI | GCAGC | 8 cut(s) | 2432, 2503, 2531, 2534, 2557, 2582, 3062, 3484 |
| BceAI | ACGGC | 5 cut(s) | 384, 886, 1893, 1920, 3180 |
| BciT130I | CCWGG | 3 cut(s) | 1199, 2531, 3820 |
| BciVI | GTATCC | 6 cut(s) | 585, 639, 2087, 3154, 3469, 3723 |
| BclI | TGATCA | 1 cut(s) | 3142 |
| BfaI | CTAG | 6 cut(s) | 56, 1193, 2070, 2183, 3117, 3894 |
| BfmI | CTRYAG | 7 cut(s) | 1488, 1638, 1757, 2304, 2329, 2517, 3048 |
| BfuAI | ACCTGC | 3 cut(s) | 1376, 3363, 3849 |
| BfuI | GTATCC | 6 cut(s) | 585, 639, 2087, 3154, 3469, 3723 |
| BglII | AGATCT | 2 cut(s) | 2039, 3213 |
| BlpI | GCTNAGC | 1 cut(s) | 1418 |
| BmcAI | AGTACT | 3 cut(s) | 456, 2215, 2431 |
| Bme1390I | CCNGG | 3 cut(s) | 1199, 2531, 3820 |
| Bme18I | GGWCC | 8 cut(s) | 679, 924, 2158, 3252, 3296, 3581, 3708, 4178 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 619 |
| BmeT110I | CYCGRG | 2 cut(s) | 920, 3194 |
| BmrFI | CCNGG | 3 cut(s) | 1199, 2531, 3820 |
| BmrI | ACTGGG | 1 cut(s) | 1034 |
| BmtI | GCTAGC | 2 cut(s) | 1196, 2073 |
| BmuI | ACTGGG | 1 cut(s) | 1034 |
| BpiI | GAAGAC | 4 cut(s) | 121, 618, 1101, 2886 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2721, 2753 |
| BpmI | CTGGAG | 6 cut(s) | 374, 407, 428, 2188, 2748, 3026 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1188, 3462 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1418 |
| Bpu14I | TTCGAA | 1 cut(s) | 657 |
| BpuEI | CTTGAG | 2 cut(s) | 1373, 3547 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1344, 1410 |
| BsaHI | GRCGYC | 1 cut(s) | 222 |
| BsaI | GGTCTC | 3 cut(s) | 1876, 2763, 3327 |
| BsaJI | CCNNGG | 9 cut(s) | 633, 919, 1197, 1862, 1932, 2530, 3438, 3818, 3881 |
| BsaWI | WCCGGW | 2 cut(s) | 290, 1709 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 25, 55, 224, 254 |
| Bse118I | RCCGGY | 2 cut(s) | 371, 1709 |
| Bse3DI | GCAATG | 5 cut(s) | 1220, 2115, 2241, 2420, 3925 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1344, 1410 |
| BseAI | TCCGGA | 1 cut(s) | 290 |
| BseBI | CCWGG | 3 cut(s) | 1199, 2531, 3820 |
| BseDI | CCNNGG | 9 cut(s) | 633, 919, 1197, 1862, 1932, 2530, 3438, 3818, 3881 |
| BseJI | GATNNNNATC | 2 cut(s) | 1344, 1410 |
| BseMI | GCAATG | 5 cut(s) | 1220, 2115, 2241, 2420, 3925 |
| BseRI | GAGGAG | 4 cut(s) | 90, 134, 2872, 3704 |
| BseSI | GKGCMC | 2 cut(s) | 269, 2254 |
| BseX3I | CGGCCG | 1 cut(s) | 369 |
| BseXI | GCAGC | 8 cut(s) | 2432, 2503, 2531, 2534, 2557, 2582, 3062, 3484 |
| BsgI | GTGCAG | 1 cut(s) | 1917 |
| Bsh1236I | CGCG | 2 cut(s) | 200, 254 |
| Bsh1285I | CGRYCG | 1 cut(s) | 372 |
| BshFI | GGCC | 4 cut(s) | 267, 371, 918, 2902 |
| BshTI | ACCGGT | 1 cut(s) | 1709 |
| BsiEI | CGRYCG | 1 cut(s) | 372 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2254 |
| BsiHKCI | CYCGRG | 2 cut(s) | 920, 3194 |
| BsiSI | CCGG | 3 cut(s) | 291, 372, 1710 |
| BslFI | GGGAC | 9 cut(s) | 80, 363, 910, 958, 2949, 3256, 3309, 3801, 3899 |
| BsmBI | CGTCTC | 1 cut(s) | 2147 |
| BsmFI | GGGAC | 9 cut(s) | 80, 363, 910, 958, 2949, 3256, 3309, 3801, 3899 |
| BsmI | GAATGC | 1 cut(s) | 2448 |
| BsnI | GGCC | 4 cut(s) | 267, 371, 918, 2902 |
| Bso31I | GGTCTC | 3 cut(s) | 1876, 2763, 3327 |
| BsoBI | CYCGRG | 2 cut(s) | 920, 3194 |
| Bsp119I | TTCGAA | 1 cut(s) | 657 |
| Bsp120I | GGGCCC | 1 cut(s) | 265 |
| Bsp1286I | GDGCHC | 2 cut(s) | 269, 2254 |
| Bsp13I | TCCGGA | 1 cut(s) | 290 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1418 |
| Bsp19I | CCATGG | 2 cut(s) | 633, 3438 |
| BspACI | CCGC | 6 cut(s) | 133, 195, 198, 254, 1310, 1415 |
| BspANI | GGCC | 4 cut(s) | 267, 371, 918, 2902 |
| BspEI | TCCGGA | 1 cut(s) | 290 |
| BspFNI | CGCG | 2 cut(s) | 200, 254 |
| BspHI | TCATGA | 2 cut(s) | 589, 2761 |
| BspMAI | CTGCAG | 4 cut(s) | 2308, 2333, 2521, 3052 |
| BspMI | ACCTGC | 3 cut(s) | 1376, 3363, 3849 |
| BspOI | GCTAGC | 2 cut(s) | 1196, 2073 |
| BspPI | GGATC | 8 cut(s) | 143, 517, 645, 919, 2767, 2780, 3035, 3048 |
| BspT104I | TTCGAA | 1 cut(s) | 657 |
| BspTNI | GGTCTC | 3 cut(s) | 1876, 2763, 3327 |
| BsrBI | CCGCTC | 2 cut(s) | 135, 1417 |
| BsrDI | GCAATG | 5 cut(s) | 1220, 2115, 2241, 2420, 3925 |
| BsrFI | RCCGGY | 2 cut(s) | 371, 1709 |
| BssAI | RCCGGY | 2 cut(s) | 371, 1709 |
| BssECI | CCNNGG | 9 cut(s) | 633, 919, 1197, 1862, 1932, 2530, 3438, 3818, 3881 |
| BssNI | GRCGYC | 1 cut(s) | 222 |
| BssSI | CACGAG | 2 cut(s) | 471, 3740 |
| BssT1I | CCWWGG | 4 cut(s) | 633, 1862, 1932, 3438 |
| Bst2BI | CACGAG | 2 cut(s) | 471, 3740 |
| Bst2UI | CCWGG | 3 cut(s) | 1199, 2531, 3820 |
| Bst4CI | ACNGT | 8 cut(s) | 183, 1870, 2009, 2158, 2488, 3547, 3815, 4116 |
| Bst6I | CTCTTC | 3 cut(s) | 415, 2019, 2890 |
| BstACI | GRCGYC | 1 cut(s) | 222 |
| BstBI | TTCGAA | 1 cut(s) | 657 |
| BstC8I | GCNNGC | 6 cut(s) | 1009, 1036, 1194, 2071, 2527, 3869 |
| BstDSI | CCRYGG | 3 cut(s) | 633, 3438, 3881 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3359 |
| BstFNI | CGCG | 2 cut(s) | 200, 254 |
| BstHHI | GCGC | 3 cut(s) | 202, 3867, 3925 |
| BstMCI | CGRYCG | 1 cut(s) | 372 |
| BstNI | CCWGG | 3 cut(s) | 1199, 2531, 3820 |
| BstSCI | CCNGG | 3 cut(s) | 1197, 2529, 3818 |
| BstSFI | CTRYAG | 7 cut(s) | 1488, 1638, 1757, 2304, 2329, 2517, 3048 |
| BstSLI | GKGCMC | 2 cut(s) | 269, 2254 |
| BstUI | CGCG | 2 cut(s) | 200, 254 |
| BstV1I | GCAGC | 8 cut(s) | 2432, 2503, 2531, 2534, 2557, 2582, 3062, 3484 |
| BstV2I | GAAGAC | 4 cut(s) | 121, 618, 1101, 2886 |
| BstX2I | RGATCY | 6 cut(s) | 522, 911, 2039, 2772, 3040, 3213 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2491, 3439 |
| BstYI | RGATCY | 6 cut(s) | 522, 911, 2039, 2772, 3040, 3213 |
| BstZI | CGGCCG | 1 cut(s) | 369 |
| BsuI | GTATCC | 6 cut(s) | 585, 639, 2087, 3154, 3469, 3723 |
| BsuRI | GGCC | 4 cut(s) | 267, 371, 918, 2902 |
| BtgI | CCRYGG | 3 cut(s) | 633, 3438, 3881 |
| BtgZI | GCGATG | 1 cut(s) | 2386 |
| BtsI | GCAGTG | 1 cut(s) | 304 |
| BtsIMutI | CAGTG | 9 cut(s) | 304, 452, 1598, 2289, 2484, 2895, 3024, 3718, 4112 |
| BveI | ACCTGC | 3 cut(s) | 1376, 3363, 3849 |
| Cac8I | GCNNGC | 6 cut(s) | 1009, 1036, 1194, 2071, 2527, 3869 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2445, 3551, 3819, 4114 |
| CciI | TCATGA | 2 cut(s) | 589, 2761 |
| CfoI | GCGC | 3 cut(s) | 202, 3867, 3925 |
| Cfr10I | RCCGGY | 2 cut(s) | 371, 1709 |
| Csp6I | GTAC | 8 cut(s) | 455, 1229, 1929, 2214, 2430, 2953, 3490, 4031 |
| CspAI | ACCGGT | 1 cut(s) | 1709 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 789, 824 |
| CviQI | GTAC | 8 cut(s) | 455, 1229, 1929, 2214, 2430, 2953, 3490, 4031 |
| DraI | TTTAAA | 1 cut(s) | 1105 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 754, 3250 |
| DriI | GACNNNNNGTC | 1 cut(s) | 619 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 754, 3250 |
| EaeI | YGGCCR | 1 cut(s) | 369 |
| EagI | CGGCCG | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 3 cut(s) | 415, 2019, 2890 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 619 |
| EarI | CTCTTC | 3 cut(s) | 415, 2019, 2890 |
| EclXI | CGGCCG | 1 cut(s) | 369 |
| Eco130I | CCWWGG | 4 cut(s) | 633, 1862, 1932, 3438 |
| Eco24I | GRGCYC | 1 cut(s) | 269 |
| Eco31I | GGTCTC | 3 cut(s) | 1876, 2763, 3327 |
| Eco32I | GATATC | 1 cut(s) | 3279 |
| Eco47I | GGWCC | 8 cut(s) | 679, 924, 2158, 3252, 3296, 3581, 3708, 4178 |
| Eco52I | CGGCCG | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 6 cut(s) | 558, 2673, 2871, 2880, 3091, 3359 |
| Eco88I | CYCGRG | 2 cut(s) | 920, 3194 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3359 |
| EcoO109I | RGGNCCY | 3 cut(s) | 265, 924, 3581 |
| EcoRI | GAATTC | 1 cut(s) | 3443 |
| EcoRII | CCWGG | 3 cut(s) | 1197, 2529, 3818 |
| EcoRV | GATATC | 1 cut(s) | 3279 |
| EcoT14I | CCWWGG | 4 cut(s) | 633, 1862, 1932, 3438 |
| EcoT38I | GRGCYC | 1 cut(s) | 269 |
| ErhI | CCWWGG | 4 cut(s) | 633, 1862, 1932, 3438 |
| Esp3I | CGTCTC | 1 cut(s) | 2147 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1985, 2017, 2200, 2232 |
| FaqI | GGGAC | 9 cut(s) | 80, 363, 910, 958, 2949, 3256, 3309, 3801, 3899 |
| FbaI | TGATCA | 1 cut(s) | 3142 |
| FblI | GTMKAC | 1 cut(s) | 246 |
| FriOI | GRGCYC | 1 cut(s) | 269 |
| FspBI | CTAG | 6 cut(s) | 56, 1193, 2070, 2183, 3117, 3894 |
| GlaI | GCGC | 3 cut(s) | 201, 3866, 3924 |
| GsuI | CTGGAG | 6 cut(s) | 374, 407, 428, 2188, 2748, 3026 |
| HaeIII | GGCC | 4 cut(s) | 267, 371, 918, 2902 |
| HapII | CCGG | 3 cut(s) | 291, 372, 1710 |
| HhaI | GCGC | 3 cut(s) | 202, 3867, 3925 |
| Hin1I | GRCGYC | 1 cut(s) | 222 |
| Hin6I | GCGC | 3 cut(s) | 200, 3865, 3923 |
| HinP1I | GCGC | 3 cut(s) | 200, 3865, 3923 |
| HincII | GTYRAC | 3 cut(s) | 247, 2574, 3934 |
| HindII | GTYRAC | 3 cut(s) | 247, 2574, 3934 |
| HindIII | AAGCTT | 3 cut(s) | 1286, 2367, 4151 |
| HpaI | GTTAAC | 1 cut(s) | 3934 |
| HpaII | CCGG | 3 cut(s) | 291, 372, 1710 |
| HphI | GGTGA | 5 cut(s) | 25, 95, 184, 1949, 3521 |
| Hpy166II | GTNNAC | 9 cut(s) | 247, 1940, 2170, 2252, 2287, 2484, 2574, 3415, 3934 |
| Hpy8I | GTNNAC | 9 cut(s) | 247, 1940, 2170, 2252, 2287, 2484, 2574, 3415, 3934 |
| Hpy99I | CGWCG | 2 cut(s) | 224, 248 |
| HpyAV | CCTTC | 8 cut(s) | 79, 340, 2103, 2456, 2697, 3262, 3672, 3971 |
| HpyCH4III | ACNGT | 8 cut(s) | 183, 1870, 2009, 2158, 2488, 3547, 3815, 4116 |
| HpyCH4IV | ACGT | 5 cut(s) | 93, 222, 1296, 2266, 2848 |
| HpySE526I | ACGT | 5 cut(s) | 93, 222, 1296, 2266, 2848 |
| Hsp92I | GRCGYC | 1 cut(s) | 222 |
| HspAI | GCGC | 3 cut(s) | 200, 3865, 3923 |
| KflI | GGGWCCC | 1 cut(s) | 924 |
| Kpn2I | TCCGGA | 1 cut(s) | 290 |
| Ksp22I | TGATCA | 1 cut(s) | 3142 |
| KspAI | GTTAAC | 1 cut(s) | 3934 |
| LmnI | GCTCC | 8 cut(s) | 140, 276, 316, 838, 2885, 3007, 3617, 4169 |
| Lsp1109I | GCAGC | 8 cut(s) | 2432, 2503, 2531, 2534, 2557, 2582, 3062, 3484 |
| MaeI | CTAG | 6 cut(s) | 56, 1193, 2070, 2183, 3117, 3894 |
| MaeII | ACGT | 5 cut(s) | 93, 222, 1296, 2266, 2848 |
| MaeIII | GTNAC | 7 cut(s) | 1136, 1586, 1827, 1900, 3527, 3983, 3999 |
| MbiI | CCGCTC | 2 cut(s) | 135, 1417 |
| MfeI | CAATTG | 1 cut(s) | 2956 |
| MflI | RGATCY | 6 cut(s) | 522, 911, 2039, 2772, 3040, 3213 |
| MhlI | GDGCHC | 2 cut(s) | 269, 2254 |
| MlyI | GAGTC | 8 cut(s) | 389, 1070, 1460, 2504, 2900, 2987, 3554, 4207 |
| MmeI | TCCRAC | 4 cut(s) | 243, 889, 1380, 3595 |
| MroI | TCCGGA | 1 cut(s) | 290 |
| MslI | CAYNNNNRTG | 5 cut(s) | 445, 1977, 2489, 2984, 3744 |
| MspA1I | CMGCKG | 2 cut(s) | 2548, 4091 |
| MspI | CCGG | 3 cut(s) | 291, 372, 1710 |
| MspR9I | CCNGG | 3 cut(s) | 1199, 2531, 3820 |
| MunI | CAATTG | 1 cut(s) | 2956 |
| Mva1269I | GAATGC | 1 cut(s) | 2448 |
| MvaI | CCWGG | 3 cut(s) | 1199, 2531, 3820 |
| MvnI | CGCG | 2 cut(s) | 200, 254 |
| NcoI | CCATGG | 2 cut(s) | 633, 3438 |
| NheI | GCTAGC | 2 cut(s) | 1192, 2069 |
| NmuCI | GTSAC | 4 cut(s) | 1136, 1586, 1827, 3527 |
| NspV | TTCGAA | 1 cut(s) | 657 |
| OliI | CACNNNNGTG | 1 cut(s) | 445 |
| PagI | TCATGA | 2 cut(s) | 589, 2761 |
| PaqCI | CACCTGC | 1 cut(s) | 1376 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 927 |
| PctI | GAATGC | 1 cut(s) | 2448 |
| PflFI | GACNNNGTC | 1 cut(s) | 4114 |
| PinAI | ACCGGT | 1 cut(s) | 1709 |
| PleI | GAGTC | 8 cut(s) | 388, 1070, 1460, 2503, 2900, 2987, 3554, 4206 |
| PpsI | GAGTC | 8 cut(s) | 388, 1070, 1460, 2503, 2900, 2987, 3554, 4206 |
| PpuMI | RGGWCCY | 2 cut(s) | 924, 3581 |
| Psp5II | RGGWCCY | 2 cut(s) | 924, 3581 |
| Psp6I | CCWGG | 3 cut(s) | 1197, 2529, 3818 |
| PspGI | CCWGG | 3 cut(s) | 1197, 2529, 3818 |
| PspOMI | GGGCCC | 1 cut(s) | 265 |
| PspPPI | RGGWCCY | 2 cut(s) | 924, 3581 |
| PstI | CTGCAG | 4 cut(s) | 2308, 2333, 2521, 3052 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2445, 3551, 3819, 4114 |
| PsuI | RGATCY | 6 cut(s) | 522, 911, 2039, 2772, 3040, 3213 |
| PsyI | GACNNNGTC | 1 cut(s) | 4114 |
| PvuII | CAGCTG | 2 cut(s) | 2548, 4091 |
| RsaI | GTAC | 8 cut(s) | 456, 1230, 1930, 2215, 2431, 2954, 3491, 4032 |
| RsaNI | GTAC | 8 cut(s) | 455, 1229, 1929, 2214, 2430, 2953, 3490, 4031 |
| RseI | CAYNNNNRTG | 5 cut(s) | 445, 1977, 2489, 2984, 3744 |
| SalI | GTCGAC | 1 cut(s) | 245 |
| ScaI | AGTACT | 3 cut(s) | 456, 2215, 2431 |
| SchI | GAGTC | 8 cut(s) | 389, 1070, 1460, 2504, 2900, 2987, 3554, 4207 |
| ScrFI | CCNGG | 3 cut(s) | 1199, 2531, 3820 |
| SduI | GDGCHC | 2 cut(s) | 269, 2254 |
| SfcI | CTRYAG | 7 cut(s) | 1488, 1638, 1757, 2304, 2329, 2517, 3048 |
| SfuI | TTCGAA | 1 cut(s) | 657 |
| SinI | GGWCC | 8 cut(s) | 679, 924, 2158, 3252, 3296, 3581, 3708, 4178 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 445, 1977, 2489, 2984, 3744 |
| SmlI | CTYRAG | 2 cut(s) | 1352, 3562 |
| SmoI | CTYRAG | 2 cut(s) | 1352, 3562 |
| SsiI | CCGC | 6 cut(s) | 133, 195, 198, 254, 1310, 1415 |
| SspI | AATATT | 2 cut(s) | 793, 3903 |
| SspMI | CTAG | 6 cut(s) | 56, 1193, 2070, 2183, 3117, 3894 |
| StyD4I | CCNGG | 3 cut(s) | 1197, 2529, 3818 |
| StyI | CCWWGG | 4 cut(s) | 633, 1862, 1932, 3438 |
| TaaI | ACNGT | 8 cut(s) | 183, 1870, 2009, 2158, 2488, 3547, 3815, 4116 |
| TaiI | ACGT | 5 cut(s) | 96, 225, 1299, 2269, 2851 |
| TaqI | TCGA | 7 cut(s) | 24, 147, 177, 246, 657, 930, 2618 |
| TatI | WGTACW | 6 cut(s) | 454, 2213, 2429, 2952, 3489, 4030 |
| TauI | GCSGC | 2 cut(s) | 200, 1312 |
| TscAI | CASTG | 9 cut(s) | 304, 452, 1605, 2289, 2491, 2895, 3031, 3718, 4119 |
| TseFI | GTSAC | 4 cut(s) | 1136, 1586, 1827, 3527 |
| TseI | GCWGC | 8 cut(s) | 2445, 2516, 2519, 2522, 2545, 2595, 3050, 3497 |
| Tsp45I | GTSAC | 4 cut(s) | 1136, 1586, 1827, 3527 |
| TspGWI | ACGGA | 6 cut(s) | 232, 289, 2004, 3244, 3653, 4024 |
| TspRI | CASTG | 9 cut(s) | 304, 452, 1605, 2289, 2491, 2895, 3031, 3718, 4119 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4114 |
| VneI | GTGCAC | 1 cut(s) | 2250 |
| VpaK11BI | GGWCC | 8 cut(s) | 679, 924, 2158, 3252, 3296, 3581, 3708, 4178 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3359 |
| XapI | RAATTY | 8 cut(s) | 395, 742, 1055, 1670, 2226, 3320, 3443, 3962 |
| XbaI | TCTAGA | 1 cut(s) | 2182 |
| XmiI | GTMKAC | 1 cut(s) | 246 |
| XspI | CTAG | 6 cut(s) | 56, 1193, 2070, 2183, 3117, 3894 |
| ZraI | GACGTC | 1 cut(s) | 223 |
| ZrmI | AGTACT | 3 cut(s) | 456, 2215, 2431 |