Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006650

Physical Location & Seq

Genomic Coordinates Forward (+)

3671303 .. 3677341

Gene Structure 6039 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00281340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4143 bp

ATGCGAACTCGGTTCCTCAACATCGACTACTTCACCCCCACTCCACTCCAAACCCTAGAAACCCTAACCTTCCTCCACCTCCCCATCCCCATCCCCAAACTCCCTCCTCACCCCAACCTCTCCACCTCCGATGTCTTCCGCTCCCTACGCCTCGATCCCGTCCTCCAAGTCTCCCTCCAAATCGAACAGTTGCCGATCACCGCCGCGCTCTCCAAGTTCTTCTCCGACGTGCTCCCTCAGAACCTCCCCGTCGAGCTGGTGGACTTCGAGGCTGCTCCGAAACGGCGCAGTTTCGGTTCCGGAAGCAGTGCGGTTCTGGTTTCGGAGGTAATTCGCTGTATCCGAGTAGAGATTTGGCTTATCGGATTAGAAATTGGGAGATTGTTCATAGCGGCTTTGATTCTGGAACAGGAAGCCGATGTTCTTAGAAAAGAGAAGGGACTGGAGAATCAGATAACTGCCGGTTCAGAGTCTCTGGAGGCTGAATTTCAAAAAGAGGATAGTGGCAGAAGAGATGGGGATAGTGATGCACTCCAGTGTGAAGTACTCCAATTTGAAACACGAGAGCTGGATGTATTCTTGGAAAATGCTTACATTTATGAGAAAGATGAGATCCCGATTCTTTCTGAAGTTCCAGAGGAAACTCTCAATCTTACAATGCAGTATCATTTGGATATTCATGAATTGGTGCATATAGTTGAAGACTTAAAGTCAGAGTATCCCATGGATCAAAATGCTTATTCATTCGAAGATGATGGTTCTTGTCTGGACCAAATGCCCTCTTCTCAGATAGCTTTTCCTATGTTAGAAGCAAATGAGATACCTCTGCAGAATTTGACAGCTCTGTCTATGGAGGATGAACTTTCTTCTGTTTATGAAAATATTGAGCCACAACATTTGGCTCAAAGTGATAACCTAAATGGCAAGGAGCTTTTGGGTTCAAAGGATTATGGGATGTTAGAGCTTCTTTCAGATAATTGTCTATCAAAGCCGTGTGTTGGATCTGGCCTCTGGTCCCTCGACATTCCCCCTGAGATGGACTTGTTAAGCATGGTGGAGATGTCCCAGATTCAGGGAAAGATCATATATCAAGGGGCAAGCATAGGTTCCCGTTTCCAGTCTGCATGCCCAGTTGTTTTTCAGGAATTTCAGATTCTTGATTTGGACTCATCCCTAATTTTTGAAGACCTCTTTAAAGCACAAACAGCAAATGAACCACAAACTTGTGACTGGATGTTTAATGGAGACAAGAGCTTCAACAATTTGATTGTTAGTCCTGAGCTAGCCCTGGTTGATGATACATTCAAATCATTGCCTGTACCTGTTCTAAATGATAATGAAAGGATGAGTTCATCATATGTTGTTATTGAGGAAAAGCTTACTGACGTAAAGCCACAGCCGCTATCTGCATCAGATAGGATTTACTTGGATTGGCATCTTCTTGAGAAAGATAGCACCTGCCATGATTATTCCTGTCAGAAGAAGATGTTGGAGGATATGAATTCGCTCAGCATTGGTTCCTTTTGGGATTCATTTGATGATGGAAAGTTCTATGACTTGGTTTTCTCTGATGATGCTGTAGAGAACACAGAAGAAATGGAATTACAGGTGTTTCTTTCTGATGCCATGCCTATGCTTACTGGTCATCCTGGAGATGCTTCAACCAGATTGTCTTGTGACAATTTTCCACTGACAAAGAAAGCAGAGCATATAGATAAAAAAAGTGCTGTAGATGGATTAAACAAAGATGAAAGCAAGGAATTTCAGGAGTTGCTTTCTGATGGCATTGATATTCATACCGGTCATATTGGAGATGCTTCAACAAAATTGTCTGATGGCAATTTTCTACAGCCAAAAAATAGACAGCAGAGAGAGAAAAAGGGTGCTGAGAGGGCTTCATTGCTTTTCAAGTCCATGTCACAATTCAATGATATTGACTTTTTCCTGAATCCTCGGACGGCCTCTGCGGCTGGAAATAGTGATTGTGCAGTTACAGCAGTTGATAAGATTGCTTCATGTACCAAGGGTGAACAATCTCATTCTATATGTGCTAAAGTTGAGCATAGGAATGAGCAGAAGTCAAAGGAACTCTTGAACAGTTTTCCGTGTCAGGAAGAGTATAATACAAGATCTAAAGAGGATTCGGATGAAGTTGAAGCTTGCAGTATCACCCCACCTATTCCTTCTATGCCATTTGCAATGGAAGCTGACTATATTCAGCAGAGCATCATGTCTTTCCCTGAGACGGTCATTGTTGTAAACACTCAAAATCTAGATAAGGAAATGATAGTCTCCAGAAGAAGTACTTATCAAAAAATTCTTGCAATGGAGAAAAAAGGTGCACAAGTCGTAGAACGTGATTCAGAGCTACCAGTGGACATTATACTCAGTCCTGCAGTATGTTTAGTGTGGTATGACTGCAGAAACATTGGAAAGAAAGCAACTTCTCTTGATGAAGCTTCTTCATGCTTACCTTTGTGCATTGAGAACATCGCCACAAATGTTTTGACATTGCTGAGTACTACTTTCAGTAGCTGCATTCTGGTCTTTGAAGGAGACACCAGCTTCCAGTCCACTGTAATGGAGTCCTCAGATGGACTTTATGCTGCAGCAGCAAGCCTGGGAATTGATTTGCAACTGTTCAACTCCTATTCATCCGAGTTGACTGATGAGATTATATTGAGCTGCATTGAACAAGCCACAAAGCTGATAAGGGGCGTATTTCCTCAAATGCCTGAATCAGAATCTCTTGCAGAATCATTCCTTACCAAGTTTCCTTCAGTTAATGCTTTGTCAGCTCATGCAATAGTGTCTTCTGGAGTGTCTCTCATTGAGTTTTTTAAATGGTCTCATGAAAAGAGGATCCATGCAATCCAAAAGTATCATGTTCCTGATGAAAGTATCAGACTATTTAATGCTTTATGCAGATATGGTGAACGTGGAGATTCTAAATCAATAATGACAGACTGCTCCTCTTCAGTGTCTTCAGGGCCAGACTCAGGAAGATATAACTTAAATGTTTCTGAAAGAAAAAGACGGAAGTACAATTGTAGTCCTGACAAATATGACATACGAAGGAATGACTCCTTGCATCTGGAGCCGATAAACATACCCATTGATGCCATTTCGGATCCTCCTGCAGCTTCCAAGCTACATGATTCCTGTATGTCAAAAAGCCCTCACATAATTGATGAGTTCAGAAAGCCTAGATTCACTCACAATGATTTGTTTGATCAAGAACAGGTTTTGGATATGGCTATGATGAAGAATCCTTTTAGGGTTCCCGAGCAATATGATTCTCAGATCTCCAAAGAGCCTCAGTTATTAAGTGGGACAAAAAGGTCCGTTTTTTCTTTGAAGGATAAGATATCAGGTCAGAAACAGGGACCAAATGGGGCTATGATGAACAAATTTGATTTCAGAGACCTGAAGAACTCTGAAAACCTGCATGAGGATATAAAAGGAGAAGTTATTGATCTAACAGACAGTCCTGTATTTGATGTGGACTTTTCTTCTATTGCCAACTCCATGGAATTCTCATCTTTGATGCCTGAGCTTGAAATGGATACCACAAGAAAGTACAAAGCTGCAAGAAAGTTGTCTTCTGGTTCAAGCAGTCACCGAACTTTCCCAACAGTTGCTGAAATAGACTCAAGCACAACTATTTGGGGTCCTGTAAAGGAACCTAGACAAAGTTCGCAAGTTGGAGCCAACAATTATGCAGATACGGAGATTGAAAATGATGTTTTTCCTTCAAGACAACAAAACAATTTCTTAGAGGAGAGTTTCAGGCAGAGGTCCAGTGGAGTATCTCAAAGGATACATCTCCACGAGAATGATATATCAGCTTATGGAGGAACACAGCTCTCAAATGCTCTCCATTCAGGCACTCCACAACAAAACAGTCCCTGGACAATAGAGTTTCTAAACAAAATCAAGGAAAAGAGCAGGTTGCGCCAGCAGTCCTTTCCACGGGACTTATCTAGCCCAATATTGGGGTATTCAGGCAATGCGCTGAAAGTTAATAAGAGAAGAAGTCCATCCATTCTTGAATTTTTCAAGTATGAAGGTGGTAACACATCCGAGAAAGTTACCAGAACGGAAAAGACAAAAGCGACCAGTACAACGCTCATCCAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0005575 GO:0005911 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0030054 GO:0034641 GO:0035825 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0046483 GO:0048285 GO:0051304 GO:0051307 GO:0051321 GO:0055044 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1380

Amino Acids

154.87

Weight (kDa)

4.79

Isoelectric Point (pI)

56.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52290
fragaria_vesca	FvH4_7g29470 FvH4_7g29470
malus_domestica	MD01G1200800.v1.1 MD01G1200900.v1.1 MD07G1268700.v1.1
prunus_persica	Prupe.2G294300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0377251
rosa_laevigata	RLG00000007673 RLG00000026528 RLG00000026529 RLG00000026531 RLG00000035471
rosa_multiflora	Rmu_sc0000689.1_g000011 Rmu_sc0009231.1_g000001 Rmu_sc0017163.1_g000002 Rmu_sc0022060.1_g000002
rosa_roxburghii	Rroxscaffold_4G00281340
rosa_rugosa	Rorug01G0402700 Rorug01G0402700
rosa_samantha	Rh1AG419900 Rh1BG378900 Rh1CG392900 Rh1DG409500 Rh1DG409900
rosa_wichuraiana	Rw1G036840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1466
AasI	GACNNNNNNGTC	2 cut(s)	844, 3340
Acc36I	ACCTGC	3 cut(s)	1466, 3453, 3939
AccBSI	CCGCTC	1 cut(s)	141
AccII	CGCG	1 cut(s)	206
AccIII	TCCGGA	1 cut(s)	299
AciI	CCGC	7 cut(s)	139, 201, 204, 311, 392, 1400, 1967
AclWI	GGATC	8 cut(s)	149, 607, 735, 1009, 2857, 2870, 3125, 3138
AcsI	RAATTY	9 cut(s)	485, 832, 1145, 1501, 1760, 2316, 3410, 3533, 4052
AcuI	CTGAAG	5 cut(s)	648, 2763, 2961, 2970, 3449
AfaI	GTAC	8 cut(s)	546, 1320, 2020, 2305, 2521, 3044, 3581, 4123
AfiI	CCNNNNNNNGG	9 cut(s)	998, 1036, 1072, 2245, 2999, 3451, 3972, 3994, 3995
AgeI	ACCGGT	1 cut(s)	1799
AhdI	GACNNNNNGTC	1 cut(s)	709
AjiI	CACGTC	1 cut(s)	229
AjnI	CCWGG	4 cut(s)	1287, 1648, 2619, 3908
AjuI	GAANNNNNNNTTGG	2 cut(s)	1472, 1504
AleI	CACNNNNGTG	1 cut(s)	535
Alw21I	GWGCWC	2 cut(s)	234, 2344
Alw26I	GTCTC	9 cut(s)	175, 477, 1239, 2237, 2296, 2550, 2829, 2853, 3417
Alw44I	GTGCAC	1 cut(s)	2340
AlwI	GGATC	8 cut(s)	149, 607, 735, 1009, 2857, 2870, 3125, 3138
AlwNI	CAGNNNCTG	3 cut(s)	2535, 3641, 3909
Ama87I	CYCGRG	1 cut(s)	3284
Aor13HI	TCCGGA	1 cut(s)	299
AoxI	GGCC	3 cut(s)	1006, 1959, 2990
ApaLI	GTGCAC	1 cut(s)	2340
ApeKI	GCWGC	8 cut(s)	272, 2535, 2606, 2609, 2612, 2685, 3140, 3587
ApoI	RAATTY	9 cut(s)	485, 832, 1145, 1501, 1760, 2316, 3410, 3533, 4052
AsiGI	ACCGGT	1 cut(s)	1799
AspLEI	GCGC	4 cut(s)	208, 288, 3957, 4015
AspS9I	GGNCC	7 cut(s)	769, 1014, 2990, 3342, 3386, 3671, 3798
AsuHPI	GGTGA	7 cut(s)	25, 101, 190, 2039, 2161, 2945, 3611
AsuII	TTCGAA	1 cut(s)	747
AsuNHI	GCTAGC	1 cut(s)	1282
AvaI	CYCGRG	1 cut(s)	3284
AvaII	GGWCC	6 cut(s)	769, 1014, 3342, 3386, 3671, 3798
BaeGI	GKGCMC	1 cut(s)	2344
BamHI	GGATCC	2 cut(s)	2862, 3130
BauI	CACGAG	2 cut(s)	561, 3830
BbsI	GAAGAC	6 cut(s)	127, 708, 1191, 2805, 2976, 3594
Bbv12I	GWGCWC	2 cut(s)	234, 2344
BbvI	GCAGC	8 cut(s)	259, 2522, 2593, 2621, 2624, 2672, 3152, 3574
BceAI	ACGGC	3 cut(s)	299, 976, 1974
BciT130I	CCWGG	4 cut(s)	1289, 1650, 2621, 3910
BciVI	GTATCC	4 cut(s)	350, 729, 3559, 3813
BclI	TGATCA	1 cut(s)	3232
BcoDI	GTCTC	9 cut(s)	175, 477, 1239, 2237, 2296, 2550, 2829, 2853, 3417
BfaI	CTAG	6 cut(s)	56, 1283, 2273, 3207, 3687, 3984
BfmI	CTRYAG	8 cut(s)	827, 1578, 1728, 1847, 2394, 2419, 2607, 3138
BfuAI	ACCTGC	3 cut(s)	1466, 3453, 3939
BfuI	GTATCC	4 cut(s)	350, 729, 3559, 3813
BglI	GCCNNNNNGGC	1 cut(s)	1967
BglII	AGATCT	2 cut(s)	2129, 3303
BlpI	GCTNAGC	1 cut(s)	1508
BmcAI	AGTACT	3 cut(s)	546, 2305, 2521
Bme1390I	CCNGG	4 cut(s)	1289, 1650, 2621, 3910
Bme18I	GGWCC	6 cut(s)	769, 1014, 3342, 3386, 3671, 3798
BmeRI	GACNNNNNGTC	1 cut(s)	709
BmeT110I	CYCGRG	1 cut(s)	3284
BmgBI	CACGTC	1 cut(s)	229
BmgT120I	GGNCC	7 cut(s)	769, 1014, 2990, 3342, 3386, 3671, 3798
BmrFI	CCNGG	4 cut(s)	1289, 1650, 2621, 3910
BmrI	ACTGGG	1 cut(s)	1124
BmtI	GCTAGC	1 cut(s)	1286
BmuI	ACTGGG	1 cut(s)	1124
BpiI	GAAGAC	6 cut(s)	127, 708, 1191, 2805, 2976, 3594
BplI	GAGNNNNNCTC	2 cut(s)	2811, 2843
BpmI	CTGGAG	7 cut(s)	464, 497, 518, 1671, 2278, 2838, 3116
Bpu10I	CCTNAGC	2 cut(s)	1278, 3552
Bpu1102I	GCTNAGC	1 cut(s)	1508
Bpu14I	TTCGAA	1 cut(s)	747
BpuEI	CTTGAG	2 cut(s)	1463, 3637
BsaBI	GATNNNNATC	1 cut(s)	1434
BsaI	GGTCTC	2 cut(s)	2853, 3417
BsaJI	CCNNGG	8 cut(s)	723, 1287, 1952, 2022, 2620, 3528, 3908, 3971
BsaWI	WCCGGW	2 cut(s)	299, 1799
BsaXI	ACNNNNNCTCC	2 cut(s)	25, 55
Bsc4I	CCNNNNNNNGG	9 cut(s)	998, 1036, 1072, 2245, 2999, 3451, 3972, 3994, 3995
Bse118I	RCCGGY	2 cut(s)	461, 1799
Bse3DI	GCAATG	6 cut(s)	1310, 1898, 2205, 2331, 2510, 4015
Bse8I	GATNNNNATC	1 cut(s)	1434
BseAI	TCCGGA	1 cut(s)	299
BseBI	CCWGG	4 cut(s)	1289, 1650, 2621, 3910
BseDI	CCNNGG	8 cut(s)	723, 1287, 1952, 2022, 2620, 3528, 3908, 3971
BseJI	GATNNNNATC	1 cut(s)	1434
BseLI	CCNNNNNNNGG	9 cut(s)	998, 1036, 1072, 2245, 2999, 3451, 3972, 3994, 3995
BseMI	GCAATG	6 cut(s)	1310, 1898, 2205, 2331, 2510, 4015
BseRI	GAGGAG	3 cut(s)	96, 2962, 3794
BseSI	GKGCMC	1 cut(s)	2344
BseXI	GCAGC	8 cut(s)	259, 2522, 2593, 2621, 2624, 2672, 3152, 3574
BsgI	GTGCAG	1 cut(s)	2007
Bsh1236I	CGCG	1 cut(s)	206
BshFI	GGCC	3 cut(s)	1008, 1961, 2992
BshTI	ACCGGT	1 cut(s)	1799
BsiHKAI	GWGCWC	2 cut(s)	234, 2344
BsiHKCI	CYCGRG	1 cut(s)	3284
BsiSI	CCGG	3 cut(s)	300, 462, 1800
BslFI	GGGAC	7 cut(s)	453, 1000, 1048, 3346, 3399, 3891, 3989
BslI	CCNNNNNNNGG	9 cut(s)	998, 1036, 1072, 2245, 2999, 3451, 3972, 3994, 3995
BsmAI	GTCTC	9 cut(s)	175, 477, 1239, 2237, 2296, 2550, 2829, 2853, 3417
BsmBI	CGTCTC	1 cut(s)	2237
BsmFI	GGGAC	7 cut(s)	453, 1000, 1048, 3346, 3399, 3891, 3989
BsmI	GAATGC	1 cut(s)	2538
BsnI	GGCC	3 cut(s)	1008, 1961, 2992
Bso31I	GGTCTC	2 cut(s)	2853, 3417
BsoBI	CYCGRG	1 cut(s)	3284
Bsp119I	TTCGAA	1 cut(s)	747
Bsp1286I	GDGCHC	2 cut(s)	234, 2344
Bsp13I	TCCGGA	1 cut(s)	299
Bsp1720I	GCTNAGC	1 cut(s)	1508
Bsp19I	CCATGG	2 cut(s)	723, 3528
BspACI	CCGC	7 cut(s)	139, 201, 204, 311, 392, 1400, 1967
BspANI	GGCC	3 cut(s)	1008, 1961, 2992
BspEI	TCCGGA	1 cut(s)	299
BspFNI	CGCG	1 cut(s)	206
BspHI	TCATGA	2 cut(s)	679, 2851
BspMAI	CTGCAG	5 cut(s)	831, 2398, 2423, 2611, 3142
BspMI	ACCTGC	3 cut(s)	1466, 3453, 3939
BspOI	GCTAGC	1 cut(s)	1286
BspPI	GGATC	8 cut(s)	149, 607, 735, 1009, 2857, 2870, 3125, 3138
BspT104I	TTCGAA	1 cut(s)	747
BspTNI	GGTCTC	2 cut(s)	2853, 3417
BsrBI	CCGCTC	1 cut(s)	141
BsrDI	GCAATG	6 cut(s)	1310, 1898, 2205, 2331, 2510, 4015
BsrFI	RCCGGY	2 cut(s)	461, 1799
BssAI	RCCGGY	2 cut(s)	461, 1799
BssECI	CCNNGG	8 cut(s)	723, 1287, 1952, 2022, 2620, 3528, 3908, 3971
BssSI	CACGAG	2 cut(s)	561, 3830
BssT1I	CCWWGG	3 cut(s)	723, 2022, 3528
Bst2BI	CACGAG	2 cut(s)	561, 3830
Bst2UI	CCWGG	4 cut(s)	1289, 1650, 2621, 3910
Bst4CI	ACNGT	8 cut(s)	189, 2099, 2248, 2578, 2640, 3488, 3637, 3905
Bst6I	CTCTTC	4 cut(s)	505, 787, 2109, 2980
BstBI	TTCGAA	1 cut(s)	747
BstC8I	GCNNGC	6 cut(s)	1099, 1126, 1284, 2161, 2617, 3959
BstDSI	CCRYGG	3 cut(s)	723, 3528, 3971
BstENI	CCTNNNNNAGG	1 cut(s)	3449
BstFNI	CGCG	1 cut(s)	206
BstHHI	GCGC	4 cut(s)	208, 288, 3957, 4015
BstMAI	GTCTC	9 cut(s)	175, 477, 1239, 2237, 2296, 2550, 2829, 2853, 3417
BstNI	CCWGG	4 cut(s)	1289, 1650, 2621, 3910
BstNSI	RCATGY	1 cut(s)	1128
BstSCI	CCNGG	4 cut(s)	1287, 1648, 2619, 3908
BstSFI	CTRYAG	8 cut(s)	827, 1578, 1728, 1847, 2394, 2419, 2607, 3138
BstSLI	GKGCMC	1 cut(s)	2344
BstUI	CGCG	1 cut(s)	206
BstV1I	GCAGC	8 cut(s)	259, 2522, 2593, 2621, 2624, 2672, 3152, 3574
BstV2I	GAAGAC	6 cut(s)	127, 708, 1191, 2805, 2976, 3594
BstX2I	RGATCY	6 cut(s)	612, 1001, 2129, 2862, 3130, 3303
BstXI	CCANNNNNNTGG	2 cut(s)	2581, 3529
BstYI	RGATCY	6 cut(s)	612, 1001, 2129, 2862, 3130, 3303
BsuI	GTATCC	4 cut(s)	350, 729, 3559, 3813
BsuRI	GGCC	3 cut(s)	1008, 1961, 2992
BtgI	CCRYGG	3 cut(s)	723, 3528, 3971
BtgZI	GCGATG	1 cut(s)	2476
BtrI	CACGTC	1 cut(s)	229
BtsI	GCAGTG	1 cut(s)	313
BtsIMutI	CAGTG	7 cut(s)	313, 542, 1688, 2379, 2574, 2985, 3808
BveI	ACCTGC	3 cut(s)	1466, 3453, 3939
Cac8I	GCNNGC	6 cut(s)	1099, 1126, 1284, 2161, 2617, 3959
CaiI	CAGNNNCTG	3 cut(s)	2535, 3641, 3909
CciI	TCATGA	2 cut(s)	679, 2851
CfoI	GCGC	4 cut(s)	208, 288, 3957, 4015
Cfr10I	RCCGGY	2 cut(s)	461, 1799
Cfr13I	GGNCC	7 cut(s)	769, 1014, 2990, 3342, 3386, 3671, 3798
Csp6I	GTAC	8 cut(s)	545, 1319, 2019, 2304, 2520, 3043, 3580, 4122
CspAI	ACCGGT	1 cut(s)	1799
CspCI	CAANNNNNGTGG	2 cut(s)	879, 914
CviQI	GTAC	8 cut(s)	545, 1319, 2019, 2304, 2520, 3043, 3580, 4122
DraI	TTTAAA	2 cut(s)	1195, 2842
DrdI	GACNNNNNNGTC	2 cut(s)	844, 3340
DriI	GACNNNNNGTC	1 cut(s)	709
DseDI	GACNNNNNNGTC	2 cut(s)	844, 3340
Eam1104I	CTCTTC	4 cut(s)	505, 787, 2109, 2980
Eam1105I	GACNNNNNGTC	1 cut(s)	709
EarI	CTCTTC	4 cut(s)	505, 787, 2109, 2980
Eco130I	CCWWGG	3 cut(s)	723, 2022, 3528
Eco31I	GGTCTC	2 cut(s)	2853, 3417
Eco32I	GATATC	1 cut(s)	3369
Eco47I	GGWCC	6 cut(s)	769, 1014, 3342, 3386, 3671, 3798
Eco57I	CTGAAG	5 cut(s)	648, 2763, 2961, 2970, 3449
Eco88I	CYCGRG	1 cut(s)	3284
EcoNI	CCTNNNNNAGG	1 cut(s)	3449
EcoO109I	RGGNCCY	1 cut(s)	3671
EcoRI	GAATTC	2 cut(s)	1501, 3533
EcoRII	CCWGG	4 cut(s)	1287, 1648, 2619, 3908
EcoRV	GATATC	1 cut(s)	3369
EcoT14I	CCWWGG	3 cut(s)	723, 2022, 3528
ErhI	CCWWGG	3 cut(s)	723, 2022, 3528
Esp3I	CGTCTC	1 cut(s)	2237
FalI	AAGNNNNNCTT	4 cut(s)	2075, 2107, 2290, 2322
FaqI	GGGAC	7 cut(s)	453, 1000, 1048, 3346, 3399, 3891, 3989
FauNDI	CATATG	1 cut(s)	1357
FbaI	TGATCA	1 cut(s)	3232
FspBI	CTAG	6 cut(s)	56, 1283, 2273, 3207, 3687, 3984
GlaI	GCGC	4 cut(s)	207, 287, 3956, 4014
GsuI	CTGGAG	7 cut(s)	464, 497, 518, 1671, 2278, 2838, 3116
HaeIII	GGCC	3 cut(s)	1008, 1961, 2992
HapII	CCGG	3 cut(s)	300, 462, 1800
HhaI	GCGC	4 cut(s)	208, 288, 3957, 4015
Hin6I	GCGC	4 cut(s)	206, 286, 3955, 4013
HinP1I	GCGC	4 cut(s)	206, 286, 3955, 4013
HincII	GTYRAC	1 cut(s)	2664
HindII	GTYRAC	1 cut(s)	2664
HindIII	AAGCTT	3 cut(s)	1376, 2157, 2457
HpaII	CCGG	3 cut(s)	300, 462, 1800
HphI	GGTGA	7 cut(s)	25, 101, 190, 2039, 2161, 2945, 3611
Hpy166II	GTNNAC	9 cut(s)	262, 2030, 2260, 2342, 2377, 2574, 2664, 2936, 3505
Hpy8I	GTNNAC	9 cut(s)	262, 2030, 2260, 2342, 2377, 2574, 2664, 2936, 3505
Hpy99I	CGWCG	2 cut(s)	230, 254
HpyAV	CCTTC	9 cut(s)	79, 430, 2193, 2546, 2787, 3069, 3352, 3762, 4061
HpyCH4III	ACNGT	8 cut(s)	189, 2099, 2248, 2578, 2640, 3488, 3637, 3905
HpyCH4IV	ACGT	4 cut(s)	228, 1386, 2356, 2938
HpySE526I	ACGT	4 cut(s)	228, 1386, 2356, 2938
HspAI	GCGC	4 cut(s)	206, 286, 3955, 4013
Kpn2I	TCCGGA	1 cut(s)	299
Ksp22I	TGATCA	1 cut(s)	3232
LmnI	GCTCC	7 cut(s)	146, 237, 280, 928, 2975, 3097, 3707
Lsp1109I	GCAGC	8 cut(s)	259, 2522, 2593, 2621, 2624, 2672, 3152, 3574
MaeI	CTAG	6 cut(s)	56, 1283, 2273, 3207, 3687, 3984
MaeII	ACGT	4 cut(s)	228, 1386, 2356, 2938
MaeIII	GTNAC	7 cut(s)	1226, 1676, 1917, 1990, 3617, 4073, 4090
MbiI	CCGCTC	1 cut(s)	141
MfeI	CAATTG	1 cut(s)	3046
MflI	RGATCY	6 cut(s)	612, 1001, 2129, 2862, 3130, 3303
MhlI	GDGCHC	2 cut(s)	234, 2344
MlyI	GAGTC	6 cut(s)	479, 1160, 2594, 2990, 3077, 3644
MmeI	TCCRAC	4 cut(s)	249, 979, 1470, 3685
MroI	TCCGGA	1 cut(s)	299
MslI	CAYNNNNRTG	5 cut(s)	535, 1631, 2067, 2579, 3834
MspI	CCGG	3 cut(s)	300, 462, 1800
MspR9I	CCNGG	4 cut(s)	1289, 1650, 2621, 3910
MunI	CAATTG	1 cut(s)	3046
Mva1269I	GAATGC	1 cut(s)	2538
MvaI	CCWGG	4 cut(s)	1289, 1650, 2621, 3910
MvnI	CGCG	1 cut(s)	206
NcoI	CCATGG	2 cut(s)	723, 3528
NdeI	CATATG	1 cut(s)	1357
NheI	GCTAGC	1 cut(s)	1282
NmuCI	GTSAC	4 cut(s)	1226, 1676, 1917, 3617
NspI	RCATGY	1 cut(s)	1128
NspV	TTCGAA	1 cut(s)	747
OliI	CACNNNNGTG	1 cut(s)	535
PaeI	GCATGC	1 cut(s)	1128
PagI	TCATGA	2 cut(s)	679, 2851
PaqCI	CACCTGC	1 cut(s)	1466
PcsI	WCGNNNNNNNCGW	1 cut(s)	340
PctI	GAATGC	1 cut(s)	2538
PfoI	TCCNGGA	1 cut(s)	1648
PinAI	ACCGGT	1 cut(s)	1799
PleI	GAGTC	6 cut(s)	478, 1160, 2593, 2990, 3077, 3644
PpsI	GAGTC	6 cut(s)	478, 1160, 2593, 2990, 3077, 3644
PpuMI	RGGWCCY	1 cut(s)	3671
Psp5II	RGGWCCY	1 cut(s)	3671
Psp6I	CCWGG	4 cut(s)	1287, 1648, 2619, 3908
PspGI	CCWGG	4 cut(s)	1287, 1648, 2619, 3908
PspPI	GGNCC	7 cut(s)	769, 1014, 2990, 3342, 3386, 3671, 3798
PspPPI	RGGWCCY	1 cut(s)	3671
PstI	CTGCAG	5 cut(s)	831, 2398, 2423, 2611, 3142
PstNI	CAGNNNCTG	3 cut(s)	2535, 3641, 3909
PsuI	RGATCY	6 cut(s)	612, 1001, 2129, 2862, 3130, 3303
RsaI	GTAC	8 cut(s)	546, 1320, 2020, 2305, 2521, 3044, 3581, 4123
RsaNI	GTAC	8 cut(s)	545, 1319, 2019, 2304, 2520, 3043, 3580, 4122
RseI	CAYNNNNRTG	5 cut(s)	535, 1631, 2067, 2579, 3834
Sau96I	GGNCC	7 cut(s)	769, 1014, 2990, 3342, 3386, 3671, 3798
ScaI	AGTACT	3 cut(s)	546, 2305, 2521
SchI	GAGTC	6 cut(s)	479, 1160, 2594, 2990, 3077, 3644
ScrFI	CCNGG	4 cut(s)	1289, 1650, 2621, 3910
SduI	GDGCHC	2 cut(s)	234, 2344
SfcI	CTRYAG	8 cut(s)	827, 1578, 1728, 1847, 2394, 2419, 2607, 3138
SfuI	TTCGAA	1 cut(s)	747
SinI	GGWCC	6 cut(s)	769, 1014, 3342, 3386, 3671, 3798
SmiMI	CAYNNNNRTG	5 cut(s)	535, 1631, 2067, 2579, 3834
SmlI	CTYRAG	2 cut(s)	1442, 3652
SmoI	CTYRAG	2 cut(s)	1442, 3652
SphI	GCATGC	1 cut(s)	1128
SsiI	CCGC	7 cut(s)	139, 201, 204, 311, 392, 1400, 1967
SspI	AATATT	2 cut(s)	883, 3993
SspMI	CTAG	6 cut(s)	56, 1283, 2273, 3207, 3687, 3984
StyD4I	CCNGG	4 cut(s)	1287, 1648, 2619, 3908
StyI	CCWWGG	3 cut(s)	723, 2022, 3528
TaaI	ACNGT	8 cut(s)	189, 2099, 2248, 2578, 2640, 3488, 3637, 3905
TaiI	ACGT	4 cut(s)	231, 1389, 2359, 2941
TaqI	TCGA	7 cut(s)	24, 153, 183, 252, 267, 747, 1020
TatI	WGTACW	6 cut(s)	544, 2303, 2519, 3042, 3579, 4121
TauI	GCSGC	4 cut(s)	206, 395, 1402, 1970
TscAI	CASTG	7 cut(s)	313, 542, 1695, 2379, 2581, 2985, 3808
TseFI	GTSAC	4 cut(s)	1226, 1676, 1917, 3617
TseI	GCWGC	8 cut(s)	272, 2535, 2606, 2609, 2612, 2685, 3140, 3587
Tsp45I	GTSAC	4 cut(s)	1226, 1676, 1917, 3617
TspGWI	ACGGA	5 cut(s)	2094, 3052, 3334, 3743, 4115
TspRI	CASTG	7 cut(s)	313, 542, 1695, 2379, 2581, 2985, 3808
VneI	GTGCAC	1 cut(s)	2340
VpaK11BI	GGWCC	6 cut(s)	769, 1014, 3342, 3386, 3671, 3798
XagI	CCTNNNNNAGG	1 cut(s)	3449
XapI	RAATTY	9 cut(s)	485, 832, 1145, 1501, 1760, 2316, 3410, 3533, 4052
XbaI	TCTAGA	1 cut(s)	2272
XceI	RCATGY	1 cut(s)	1128
XspI	CTAG	6 cut(s)	56, 1283, 2273, 3207, 3687, 3984
ZrmI	AGTACT	3 cut(s)	546, 2305, 2521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.