Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Forward (+)

5653118 .. 5654335

Gene Structure 1218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1069500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGATGCTCGGAGAACCACACCGTCCTAATCCAACGGTTCACGTCCCACCGTGGCTTCAGCTGGACGATCCTACGGCCGAGATGTACTCCCCGTACCCGCTCAGCGGCGTCTCCGTTAACTCCGACGGCAATGCAAGCGGCGCCGACTTCAACAGCCCGTACTACCTCGACGATGCCCTAACGACGCTCCAGCGCTTCTTGCCGTCCAACGAGACCGACCTGGATTCCGACTCCGACATTTCTGGCCGCGAATCCGACGCGCCGGTCGACGCCTACTCCTGCGACCACTTCAGGATGTTCGATTTCAAGGTCAGGAGGTGCGCACGTGGAAGGTCACATGACTGGACCGAGTGTCCGTACGCCCACCCGGGTGAGAAGGCCCGGAGGCGCGACCCGAGGAAGTATCACTATTCGGGTACGGCCTGCCCCGATTTCCGAAAAGGTCATTGCAAGAAGGGCGACACGTGTGAGTTCGCGCACGGGGTTTTCGAGTGCTGGCTCCACCCGGCTCGCTACCGCACTCAGCCGTGCAAGGACGGCACCAGCTGCAAGCGGAGGGTTTGTTTCTTTGCTCACACGCCGGAGCAGCTTAGGGTTTTGCCTCAGCAGAGCCCCAGAGGAGGAGCCAACTCGCTCAACTCGGCCGAATCGTATGACGGGTCGCCGCTGAGGCAGGCGATAGAGGCCGCTGCCGCCTCGTGCGTGAAAACGATGCCTTTCATGTCCTCCCCGCCGGAAGACTCGCCGGATGTGTCGCCGCCGATGTCTCCGATGGGCCGGACAATGAGCCGGTCTCTCGGGTCGAGCTCGATAAACGAAATGGTGGTTTCCCTGAGGAACTTGCAGCTCGGAAAGGTCAAGTCTCTGCCCTCCTCTTGGAACGTTCAGGTGGGAGGATCTTCCGGATTCGGGTCTCCAGTATCTTCCGGGTTCGGGTCTCCGGGCTCTTCCGCATTCGGATCTCCACGCATGTCCATGCTCCGACCCGGATTCTGCAGCCTGCCTTCAACGCCGACCCGGGTCCCGGCCCGTTCCGGAATCGGGTATTTGGATTTCTGCGAGGAGGAGCCTGCAATGGAGAGGGTGGAGTCTGGAAGGGGGCTGAGAGCCAGGATGTTAGAGAAGCTGAGGGAGGAGAATTCGTTGGGCCGGGTCGACCCGGGTCCGAACTGTACCGGTGCTCCGGATGTTGGGTGGGTTTCTGAGCTGGTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

406

Amino Acids

44.32

Weight (kDa)

6.56

Isoelectric Point (pI)

72.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	96 - 129	2.9e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	140 - 161	6.4e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	263
Acc16I	TGCGCA	1 cut(s)	322
AccB1I	GGYRCC	2 cut(s)	140, 539
AccBSI	CCGCTC	1 cut(s)	100
AccI	GTMKAC	2 cut(s)	267, 1155
AccII	CGCG	4 cut(s)	249, 260, 390, 476
AccIII	TCCGGA	3 cut(s)	902, 1034, 1183
AclI	AACGTT	1 cut(s)	882
AclWI	GGATC	3 cut(s)	62, 904, 967
AcoI	YGGCCR	3 cut(s)	75, 244, 642
AcsI	RAATTY	1 cut(s)	1138
AcuI	CTGAAG	2 cut(s)	41, 274
AcvI	CACGTG	2 cut(s)	326, 465
AcyI	GRCGYC	3 cut(s)	108, 141, 270
AfaI	GTAC	6 cut(s)	86, 95, 161, 359, 418, 1174
AfeI	AGCGCT	1 cut(s)	194
AfiI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
AflIII	ACRYGT	2 cut(s)	462, 464
AgeI	ACCGGT	1 cut(s)	1175
AgsI	TTSAA	3 cut(s)	151, 307, 1008
AhdI	GACNNNNNGTC	1 cut(s)	351
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	2 cut(s)	219, 1109
AleI	CACNNNNGTG	1 cut(s)	369
AluBI	AGCT	7 cut(s)	61, 546, 589, 807, 847, 1126, 1207
AluI	AGCT	7 cut(s)	61, 546, 589, 807, 847, 1126, 1207
Alw21I	GWGCWC	2 cut(s)	809, 1183
Alw26I	GTCTC	7 cut(s)	115, 206, 771, 798, 867, 918, 942
AlwI	GGATC	3 cut(s)	62, 904, 967
Ama87I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
Aor13HI	TCCGGA	3 cut(s)	902, 1034, 1183
Aor51HI	AGCGCT	1 cut(s)	194
AoxI	GGCC	9 cut(s)	75, 244, 378, 420, 642, 684, 775, 1026, 1147
ApeKI	GCWGC	5 cut(s)	546, 586, 689, 844, 996
ApoI	RAATTY	1 cut(s)	1138
AsiGI	ACCGGT	1 cut(s)	1175
AspLEI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
AspS9I	GGNCC	7 cut(s)	345, 379, 775, 1021, 1027, 1147, 1163
AsuHPI	GGTGA	1 cut(s)	383
AvaI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
AvaII	GGWCC	3 cut(s)	345, 1021, 1163
AxyI	CCTNAGG	1 cut(s)	833
BanI	GGYRCC	2 cut(s)	140, 539
BanII	GRGCYC	3 cut(s)	614, 809, 947
BauI	CACGAG	1 cut(s)	697
BbrPI	CACGTG	2 cut(s)	326, 465
BbsI	GAAGAC	1 cut(s)	744
Bbv12I	GWGCWC	2 cut(s)	809, 1183
BbvCI	CCTCAGC	3 cut(s)	603, 668, 1127
BbvI	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
BccI	CCATC	1 cut(s)	766
BceAI	ACGGC	6 cut(s)	90, 142, 187, 435, 511, 553
BcgI	CGANNNNNNTGC	2 cut(s)	113, 147
BciT130I	CCWGG	2 cut(s)	221, 1111
BcoDI	GTCTC	7 cut(s)	115, 206, 771, 798, 867, 918, 942
BfmI	CTRYAG	1 cut(s)	994
BfoI	RGCGCY	2 cut(s)	144, 196
BglI	GCCNNNNNGGC	1 cut(s)	670
BlpI	GCTNAGC	1 cut(s)	101
Bme18I	GGWCC	3 cut(s)	345, 1021, 1163
BmeRI	GACNNNNNGTC	1 cut(s)	351
BmeT110I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	7 cut(s)	345, 379, 775, 1021, 1027, 1147, 1163
BmiI	GGNNCC	8 cut(s)	142, 500, 541, 625, 1022, 1023, 1068, 1164
BmsI	GCATC	2 cut(s)	163, 702
BoxI	GACNNNNGTC	2 cut(s)	1019, 1161
BpiI	GAAGAC	1 cut(s)	744
BplI	GAGNNNNNCTC	4 cut(s)	71, 103, 778, 810
BpmI	CTGGAG	2 cut(s)	173, 900
Bpu10I	CCTNAGC	4 cut(s)	590, 603, 668, 1127
Bpu1102I	GCTNAGC	1 cut(s)	101
BsaAI	YACGTR	2 cut(s)	326, 465
BsaHI	GRCGYC	3 cut(s)	108, 141, 270
BsaI	GGTCTC	4 cut(s)	206, 798, 918, 942
BsaJI	CCNNGG	5 cut(s)	50, 367, 395, 1017, 1159
BsaWI	WCCGGW	4 cut(s)	902, 1034, 1175, 1183
BsaXI	ACNNNNNCTCC	8 cut(s)	260, 290, 547, 577, 1127, 1157, 1165, 1195
Bsc4I	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
Bse118I	RCCGGY	3 cut(s)	262, 789, 1175
Bse1I	ACTGG	2 cut(s)	347, 917
Bse21I	CCTNAGG	1 cut(s)	833
Bse3DI	GCAATG	3 cut(s)	136, 445, 1080
BseAI	TCCGGA	3 cut(s)	902, 1034, 1183
BseBI	CCWGG	2 cut(s)	221, 1111
BseDI	CCNNGG	5 cut(s)	50, 367, 395, 1017, 1159
BseGI	GGATG	4 cut(s)	300, 754, 1119, 1192
BseLI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
BseMI	GCAATG	3 cut(s)	136, 445, 1080
BseMII	CTCAG	8 cut(s)	115, 536, 617, 659, 824, 1094, 1118, 1194
BseNI	ACTGG	2 cut(s)	347, 917
BseRI	GAGGAG	6 cut(s)	633, 636, 862, 1076, 1079, 1148
BseX3I	CGGCCG	2 cut(s)	75, 642
BseXI	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
Bsh1236I	CGCG	4 cut(s)	249, 260, 390, 476
Bsh1285I	CGRYCG	3 cut(s)	78, 267, 645
BshFI	GGCC	9 cut(s)	77, 246, 380, 422, 644, 686, 777, 1028, 1149
BshNI	GGYRCC	2 cut(s)	140, 539
BshTI	ACCGGT	1 cut(s)	1175
BsiEI	CGRYCG	3 cut(s)	78, 267, 645
BsiHKAI	GWGCWC	2 cut(s)	809, 1183
BsiHKCI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
BsiWI	CGTACG	1 cut(s)	357
BslFI	GGGAC	2 cut(s)	29, 1007
BslI	CCNNNNNNNGG	8 cut(s)	104, 620, 876, 909, 933, 1024, 1041, 1190
BsmAI	GTCTC	7 cut(s)	115, 206, 771, 798, 867, 918, 942
BsmBI	CGTCTC	1 cut(s)	115
BsmFI	GGGAC	2 cut(s)	29, 1007
BsmI	GAATGC	1 cut(s)	953
BsnI	GGCC	9 cut(s)	77, 246, 380, 422, 644, 686, 777, 1028, 1149
Bso31I	GGTCTC	4 cut(s)	206, 798, 918, 942
BsoBI	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
Bsp1286I	GDGCHC	4 cut(s)	614, 809, 947, 1183
Bsp13I	TCCGGA	3 cut(s)	902, 1034, 1183
Bsp143I	GATC	3 cut(s)	67, 896, 959
Bsp1720I	GCTNAGC	1 cut(s)	101
BspANI	GGCC	9 cut(s)	77, 246, 380, 422, 644, 686, 777, 1028, 1149
BspCNI	CTCAG	8 cut(s)	114, 535, 616, 660, 825, 1095, 1119, 1195
BspEI	TCCGGA	3 cut(s)	902, 1034, 1183
BspFNI	CGCG	4 cut(s)	249, 260, 390, 476
BspLI	GGNNCC	8 cut(s)	142, 500, 541, 625, 1022, 1023, 1068, 1164
BspMAI	CTGCAG	1 cut(s)	998
BspPI	GGATC	3 cut(s)	62, 904, 967
BspQI	GCTCTTC	1 cut(s)	952
BspT107I	GGYRCC	2 cut(s)	140, 539
BspTNI	GGTCTC	4 cut(s)	206, 798, 918, 942
BsrBI	CCGCTC	1 cut(s)	100
BsrDI	GCAATG	3 cut(s)	136, 445, 1080
BsrFI	RCCGGY	3 cut(s)	262, 789, 1175
BsrI	ACTGG	2 cut(s)	347, 917
BssAI	RCCGGY	3 cut(s)	262, 789, 1175
BssECI	CCNNGG	5 cut(s)	50, 367, 395, 1017, 1159
BssMI	GATC	3 cut(s)	67, 896, 959
BssNI	GRCGYC	3 cut(s)	108, 141, 270
BssSI	CACGAG	1 cut(s)	697
Bst2BI	CACGAG	1 cut(s)	697
Bst2UI	CCWGG	2 cut(s)	221, 1111
Bst4CI	ACNGT	4 cut(s)	23, 37, 51, 1172
Bst6I	CTCTTC	1 cut(s)	952
BstACI	GRCGYC	3 cut(s)	108, 141, 270
BstAPI	GCANNNNNTGC	1 cut(s)	546
BstBAI	YACGTR	2 cut(s)	326, 465
BstC8I	GCNNGC	8 cut(s)	136, 424, 497, 511, 551, 675, 1001, 1071
BstDEI	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
BstDSI	CCRYGG	1 cut(s)	50
BstF5I	GGATG	4 cut(s)	300, 754, 1119, 1192
BstFNI	CGCG	4 cut(s)	249, 260, 390, 476
BstH2I	RGCGCY	2 cut(s)	144, 196
BstHHI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
BstKTI	GATC	3 cut(s)	70, 899, 962
BstMAI	GTCTC	7 cut(s)	115, 206, 771, 798, 867, 918, 942
BstMBI	GATC	3 cut(s)	67, 896, 959
BstMCI	CGRYCG	3 cut(s)	78, 267, 645
BstNI	CCWGG	2 cut(s)	221, 1111
BstNSI	RCATGY	1 cut(s)	973
BstPAI	GACNNNNGTC	2 cut(s)	1019, 1161
BstSFI	CTRYAG	1 cut(s)	994
BstUI	CGCG	4 cut(s)	249, 260, 390, 476
BstV1I	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	896, 959
BstYI	RGATCY	2 cut(s)	896, 959
BstZI	CGGCCG	2 cut(s)	75, 642
Bsu36I	CCTNAGG	1 cut(s)	833
BsuRI	GGCC	9 cut(s)	77, 246, 380, 422, 644, 686, 777, 1028, 1149
BtgI	CCRYGG	1 cut(s)	50
BtrI	CACGTC	1 cut(s)	43
BtsCI	GGATG	4 cut(s)	300, 754, 1119, 1192
Cac8I	GCNNGC	8 cut(s)	136, 424, 497, 511, 551, 675, 1001, 1071
CfoI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
Cfr10I	RCCGGY	3 cut(s)	262, 789, 1175
Cfr13I	GGNCC	7 cut(s)	345, 379, 775, 1021, 1027, 1147, 1163
Cfr9I	CCCGGG	3 cut(s)	367, 1017, 1159
CseI	GACGC	4 cut(s)	97, 193, 266, 278
Csp6I	GTAC	6 cut(s)	85, 94, 160, 358, 417, 1173
CspAI	ACCGGT	1 cut(s)	1175
CviAII	CATG	4 cut(s)	338, 721, 970, 976
CviQI	GTAC	6 cut(s)	85, 94, 160, 358, 417, 1173
DdeI	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
DinI	GGCGCC	1 cut(s)	142
DpnI	GATC	3 cut(s)	69, 898, 961
DpnII	GATC	3 cut(s)	67, 896, 959
DrdI	GACNNNNNNGTC	1 cut(s)	263
DriI	GACNNNNNGTC	1 cut(s)	351
DseDI	GACNNNNNNGTC	1 cut(s)	263
EaeI	YGGCCR	3 cut(s)	75, 244, 642
EagI	CGGCCG	2 cut(s)	75, 642
Eam1104I	CTCTTC	1 cut(s)	952
Eam1105I	GACNNNNNGTC	1 cut(s)	351
EarI	CTCTTC	1 cut(s)	952
Ecl136II	GAGCTC	1 cut(s)	807
EclXI	CGGCCG	2 cut(s)	75, 642
Eco24I	GRGCYC	3 cut(s)	614, 809, 947
Eco31I	GGTCTC	4 cut(s)	206, 798, 918, 942
Eco47I	GGWCC	3 cut(s)	345, 1021, 1163
Eco47III	AGCGCT	1 cut(s)	194
Eco52I	CGGCCG	2 cut(s)	75, 642
Eco53kI	GAGCTC	1 cut(s)	807
Eco57I	CTGAAG	2 cut(s)	41, 274
Eco72I	CACGTG	2 cut(s)	326, 465
Eco81I	CCTNAGG	1 cut(s)	833
Eco88I	CYCGRG	5 cut(s)	367, 394, 797, 1017, 1159
EcoICRI	GAGCTC	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	1021
EcoRI	GAATTC	1 cut(s)	1138
EcoRII	CCWGG	2 cut(s)	219, 1109
EcoT38I	GRGCYC	3 cut(s)	614, 809, 947
EgeI	GGCGCC	1 cut(s)	142
EheI	GGCGCC	1 cut(s)	142
Esp3I	CGTCTC	1 cut(s)	115
FaeI	CATG	4 cut(s)	341, 724, 973, 979
FaiI	YATR	5 cut(s)	339, 654, 722, 971, 977
FaqI	GGGAC	2 cut(s)	29, 1007
FatI	CATG	4 cut(s)	337, 720, 969, 975
FauI	CCCGC	2 cut(s)	105, 738
FblI	GTMKAC	2 cut(s)	267, 1155
FokI	GGATG	4 cut(s)	307, 761, 1126, 1199
FriOI	GRGCYC	3 cut(s)	614, 809, 947
FspAI	RTGCGCAY	1 cut(s)	322
FspI	TGCGCA	1 cut(s)	322
GlaI	GCGC	6 cut(s)	142, 194, 261, 322, 389, 477
GsuI	CTGGAG	2 cut(s)	173, 900
HaeII	RGCGCY	2 cut(s)	144, 196
HaeIII	GGCC	9 cut(s)	77, 246, 380, 422, 644, 686, 777, 1028, 1149
HgaI	GACGC	4 cut(s)	97, 193, 266, 278
HhaI	GCGC	6 cut(s)	143, 195, 262, 323, 390, 478
Hin1I	GRCGYC	3 cut(s)	108, 141, 270
Hin1II	CATG	4 cut(s)	341, 724, 973, 979
Hin6I	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
HinP1I	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
HincII	GTYRAC	3 cut(s)	118, 268, 1156
HindII	GTYRAC	3 cut(s)	118, 268, 1156
HinfI	GANTC	9 cut(s)	224, 230, 251, 647, 740, 906, 990, 1038, 1088
HpaI	GTTAAC	1 cut(s)	118
HphI	GGTGA	1 cut(s)	383
Hpy166II	GTNNAC	4 cut(s)	40, 118, 268, 1156
Hpy188III	TCNNGA	6 cut(s)	292, 313, 903, 1035, 1092, 1184
Hpy8I	GTNNAC	4 cut(s)	40, 118, 268, 1156
Hpy99I	CGWCG	5 cut(s)	128, 173, 187, 260, 272
HpyAV	CCTTC	5 cut(s)	324, 370, 448, 1014, 1089
HpyCH4III	ACNGT	4 cut(s)	23, 37, 51, 1172
HpyCH4IV	ACGT	4 cut(s)	42, 325, 464, 882
HpyCH4V	TGCA	7 cut(s)	134, 450, 531, 549, 844, 996, 1073
HpyF3I	CTNAG	9 cut(s)	101, 522, 590, 603, 668, 833, 1103, 1127, 1203
HpySE526I	ACGT	4 cut(s)	42, 325, 464, 882
Hsp92I	GRCGYC	3 cut(s)	108, 141, 270
Hsp92II	CATG	4 cut(s)	341, 724, 973, 979
HspAI	GCGC	6 cut(s)	141, 193, 260, 321, 388, 476
KasI	GGCGCC	1 cut(s)	140
KflI	GGGWCCC	1 cut(s)	1021
Kpn2I	TCCGGA	3 cut(s)	902, 1034, 1183
KspAI	GTTAAC	1 cut(s)	118
Kzo9I	GATC	3 cut(s)	67, 896, 959
LguI	GCTCTTC	1 cut(s)	952
LmnI	GCTCC	7 cut(s)	192, 504, 583, 623, 984, 1066, 1186
Lsp1109I	GCAGC	5 cut(s)	533, 598, 676, 856, 1008
LweI	GCATC	2 cut(s)	163, 702
MaeII	ACGT	4 cut(s)	42, 325, 464, 882
MaeIII	GTNAC	1 cut(s)	333
MalI	GATC	3 cut(s)	69, 898, 961
MbiI	CCGCTC	1 cut(s)	100
MboI	GATC	3 cut(s)	67, 896, 959
MboII	GAAGA	4 cut(s)	749, 891, 915, 939
MflI	RGATCY	2 cut(s)	896, 959
MhlI	GDGCHC	4 cut(s)	614, 809, 947, 1183
MluCI	AATT	1 cut(s)	1138
Mly113I	GGCGCC	1 cut(s)	141
MlyI	GAGTC	3 cut(s)	224, 734, 1097
MmeI	TCCRAC	7 cut(s)	56, 147, 231, 252, 258, 279, 1006
MroI	TCCGGA	3 cut(s)	902, 1034, 1183
MseI	TTAA	1 cut(s)	117
MslI	CAYNNNNRTG	2 cut(s)	369, 974
MspA1I	CMGCKG	5 cut(s)	61, 105, 546, 667, 689
Mva1269I	GAATGC	1 cut(s)	953
MvaI	CCWGG	2 cut(s)	221, 1111
MvnI	CGCG	4 cut(s)	249, 260, 390, 476
NarI	GGCGCC	1 cut(s)	141
NdeII	GATC	3 cut(s)	67, 896, 959
NlaIII	CATG	4 cut(s)	341, 724, 973, 979
NlaIV	GGNNCC	8 cut(s)	142, 500, 541, 625, 1022, 1023, 1068, 1164
NmeAIII	GCCGAG	2 cut(s)	103, 620
NmuCI	GTSAC	1 cut(s)	333
NsbI	TGCGCA	1 cut(s)	322
NspI	RCATGY	1 cut(s)	973
OliI	CACNNNNGTG	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	952
PcsI	WCGNNNNNNNCGW	3 cut(s)	264, 486, 647
PctI	GAATGC	1 cut(s)	953
PfeI	GAWTC	6 cut(s)	224, 251, 647, 906, 990, 1038
Pfl23II	CGTACG	1 cut(s)	357
PinAI	ACCGGT	1 cut(s)	1175
PleI	GAGTC	3 cut(s)	224, 734, 1096
PluTI	GGCGCC	1 cut(s)	144
PmaCI	CACGTG	2 cut(s)	326, 465
PmlI	CACGTG	2 cut(s)	326, 465
PpsI	GAGTC	3 cut(s)	224, 734, 1096
Ppu21I	YACGTR	2 cut(s)	326, 465
PpuMI	RGGWCCY	1 cut(s)	1021
PshAI	GACNNNNGTC	2 cut(s)	1019, 1161
Psp124BI	GAGCTC	1 cut(s)	809
Psp1406I	AACGTT	1 cut(s)	882
Psp5II	RGGWCCY	1 cut(s)	1021
Psp6I	CCWGG	2 cut(s)	219, 1109
PspCI	CACGTG	2 cut(s)	326, 465
PspGI	CCWGG	2 cut(s)	219, 1109
PspLI	CGTACG	1 cut(s)	357
PspN4I	GGNNCC	8 cut(s)	142, 500, 541, 625, 1022, 1023, 1068, 1164
PspPI	GGNCC	7 cut(s)	345, 379, 775, 1021, 1027, 1147, 1163
PspPPI	RGGWCCY	1 cut(s)	1021
PstI	CTGCAG	1 cut(s)	998
PsuI	RGATCY	2 cut(s)	896, 959
PvuII	CAGCTG	2 cut(s)	61, 546
RsaI	GTAC	6 cut(s)	86, 95, 161, 359, 418, 1174
RsaNI	GTAC	6 cut(s)	85, 94, 160, 358, 417, 1173
RseI	CAYNNNNRTG	2 cut(s)	369, 974
SacI	GAGCTC	1 cut(s)	809
SalI	GTCGAC	2 cut(s)	266, 1154
SapI	GCTCTTC	1 cut(s)	952
SaqAI	TTAA	1 cut(s)	117
Sau3AI	GATC	3 cut(s)	67, 896, 959
Sau96I	GGNCC	7 cut(s)	345, 379, 775, 1021, 1027, 1147, 1163
SchI	GAGTC	3 cut(s)	224, 734, 1097
SduI	GDGCHC	4 cut(s)	614, 809, 947, 1183
SfaNI	GCATC	2 cut(s)	163, 702
SfcI	CTRYAG	1 cut(s)	994
SfoI	GGCGCC	1 cut(s)	142
SinI	GGWCC	3 cut(s)	345, 1021, 1163
SmaI	CCCGGG	3 cut(s)	369, 1019, 1161
SmiMI	CAYNNNNRTG	2 cut(s)	369, 974
Sse9I	AATT	1 cut(s)	1138
SspDI	GGCGCC	1 cut(s)	140
SstI	GAGCTC	1 cut(s)	809
TaaI	ACNGT	4 cut(s)	23, 37, 51, 1172
TaiI	ACGT	4 cut(s)	45, 328, 467, 885
TaqI	TCGA	7 cut(s)	168, 267, 300, 489, 803, 809, 1155
TaqII	GACCGA	2 cut(s)	230, 362
TasI	AATT	1 cut(s)	1138
TatI	WGTACW	1 cut(s)	84
TauI	GCSGC	7 cut(s)	108, 141, 249, 667, 689, 695, 760
TfiI	GAWTC	6 cut(s)	224, 251, 647, 906, 990, 1038
Tru1I	TTAA	1 cut(s)	117
Tru9I	TTAA	1 cut(s)	117
TseFI	GTSAC	1 cut(s)	333
TseI	GCWGC	5 cut(s)	546, 586, 689, 844, 996
Tsp45I	GTSAC	1 cut(s)	333
TspDTI	ATGAA	1 cut(s)	709
TspGWI	ACGGA	2 cut(s)	103, 345
TspMI	CCCGGG	3 cut(s)	367, 1017, 1159
VpaK11BI	GGWCC	3 cut(s)	345, 1021, 1163
XapI	RAATTY	1 cut(s)	1138
XceI	RCATGY	1 cut(s)	973
XmaI	CCCGGG	3 cut(s)	367, 1017, 1159
XmiI	GTMKAC	2 cut(s)	267, 1155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.