Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Forward (+)

5370469 .. 5371626

Gene Structure 1158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG071100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGATCGGCGAACCTCACCGTTCGAATCCGACCATCCACGTCCCCCCGTGGCTCACCCTCGACGATCCAACGGCCGAGATGTACTCCCCCTACCCCCTGAGCGGCGTCTCCGTCAACTCTGACGTCACCAATGCCAACAGCCCCTACCACCTCAACGAGGCTCTCGCCACTCTCCAGCGCTACTTGCCTTCCAACGAGGCTTCCGACCCGGACCCGGACTCCGACTGCGAGATTTCGGGTATGGACTCGGACTCTCCGGTGGACGCCTACTCCTGCGACCATTTTCGGATGTTTGAGTTCAAGGTTCGTCGCTGCGCACGTGGCAGGTCCCATGACTGGACCGACTGCCCCTTCGCCCACCCGGGCGAGAAGGCCCGCCGCCGCGACCCGAGGAAGTACCACTATTCGGGTTCCGCCTGCCCCGATTTTCGAAAGGGCCACTGCAAGAAGGGAGACTCGTGCGAGTTCGCTCACGGCGTTTTCGAGTGCTGGCTCCACCCTGCGCGTTATCGGACTCAGCCCTGTAAAGATGGTACTAGCTGCAAGAGGAGAGTGTGCTTCTTCGCTCACACGCCGGAGCAGCTTAGGGTTTTGCCCCAGCAGAGTCCCCGAGGGTCAACCTCGGCCGAGTCGTACGACGGGTCGCCGCTGAGGCAGGCCATGGAGGCGGCGTCGTTGGGGAAAGGCATGCCGTTTATGTCGTCGCCGCCGTCGATTTCGCCGGAAGATTCGCCGCCGGTGTCTCCGATGACCCGGTCGGTGAGCCGGTCTCTGGGTTCGAGCTCGATTAATGAAATGGTGGCGTCGCTGAGGAACTTGCAGCTGGGGAAGGTCAAGTCTCTGCCCACTTCATGGAATGTTCAAGTCGGGTCGCCCGGGTTCGTTTCTCCACGCGGGTCGATGCTCCGTCCCGGGTTCTGTAGCCTACCTTCGACTCCGACCCGGATTCCGACCCGCTCTGCAATTGGGTTTCTGGATTTCTGTGACGAGGGTTGCGAGGAGGAGCCGCCGATGGAGAGGGTGGAGTCTGGGAGGGACTTGAGGGCCAAGATGTTCGAGAGGTTGAGGGAGGAGAATTCTCTGGAGCGGGTCGACCCGACCGAGCCACAGGCTTCCGGTGCTCCGGATGTTGGATGGGTTTCTGAGCTGGTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

385

Amino Acids

42.66

Weight (kDa)

6.03

Isoelectric Point (pI)

70.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	94 - 127	2.3e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	138 - 159	6.2e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	126
Acc16I	TGCGCA	1 cut(s)	316
Acc36I	ACCTGC	1 cut(s)	315
AccB7I	CCANNNNNTGG	1 cut(s)	852
AccBSI	CCGCTC	3 cut(s)	102, 957, 1087
AccI	GTMKAC	1 cut(s)	1092
AccII	CGCG	3 cut(s)	384, 505, 894
AccIII	TCCGGA	1 cut(s)	1123
AclWI	GGATC	1 cut(s)	59
AcoI	YGGCCR	2 cut(s)	72, 624
AcsI	RAATTY	1 cut(s)	1075
AcvI	CACGTG	1 cut(s)	320
AcyI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
AfaI	GTAC	4 cut(s)	83, 398, 535, 635
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
AgsI	TTSAA	2 cut(s)	301, 863
AjiI	CACGTC	1 cut(s)	40
AluBI	AGCT	5 cut(s)	540, 583, 783, 823, 1147
AluI	AGCT	5 cut(s)	540, 583, 783, 823, 1147
Alw21I	GWGCWC	2 cut(s)	785, 1123
Alw26I	GTCTC	5 cut(s)	112, 447, 747, 774, 843
AlwI	GGATC	1 cut(s)	59
Ama87I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
Aor13HI	TCCGGA	1 cut(s)	1123
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	6 cut(s)	72, 372, 436, 624, 657, 1044
ApeKI	GCWGC	4 cut(s)	312, 540, 580, 820
ApoI	RAATTY	1 cut(s)	1075
ArsI	GACNNNNNNTTYG	2 cut(s)	335, 367
AseI	ATTAAT	1 cut(s)	789
AspLEI	GCGC	3 cut(s)	180, 317, 505
AspS9I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
AsuHPI	GGTGA	4 cut(s)	8, 46, 118, 772
AsuII	TTCGAA	2 cut(s)	23, 430
AvaI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
AvaII	GGWCC	3 cut(s)	211, 327, 339
BanII	GRGCYC	1 cut(s)	785
BarI	GAAGNNNNNNTAC	2 cut(s)	913, 945
BauI	CACGAG	1 cut(s)	457
BbrPI	CACGTG	1 cut(s)	320
Bbv12I	GWGCWC	2 cut(s)	785, 1123
BbvCI	CCTCAGC	2 cut(s)	650, 809
BbvI	GCAGC	4 cut(s)	299, 527, 592, 832
BccI	CCATC	4 cut(s)	41, 524, 1006, 1128
BceAI	ACGGC	4 cut(s)	87, 490, 676, 694
BcoDI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BfaI	CTAG	1 cut(s)	537
BfmI	CTRYAG	1 cut(s)	919
BfoI	RGCGCY	1 cut(s)	181
BfuAI	ACCTGC	1 cut(s)	315
BglI	GCCNNNNNGGC	2 cut(s)	652, 665
Bme18I	GGWCC	3 cut(s)	211, 327, 339
BmeT110I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
BmgBI	CACGTC	1 cut(s)	40
BmgT120I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
BmiI	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
BmsI	GCATC	1 cut(s)	891
BplI	GAGNNNNNCTC	4 cut(s)	68, 100, 754, 786
BpmI	CTGGAG	2 cut(s)	158, 1103
Bpu10I	CCTNAGC	4 cut(s)	98, 584, 650, 809
Bpu14I	TTCGAA	2 cut(s)	23, 430
BpuEI	CTTGAG	1 cut(s)	1060
BsaAI	YACGTR	1 cut(s)	320
BsaHI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BsaI	GGTCTC	1 cut(s)	774
BsaJI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BsaWI	WCCGGW	3 cut(s)	256, 1115, 1123
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 254, 284, 656, 686
Bsc4I	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
Bse118I	RCCGGY	2 cut(s)	736, 765
Bse1I	ACTGG	1 cut(s)	341
BseAI	TCCGGA	1 cut(s)	1123
BseDI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BseGI	GGATG	4 cut(s)	33, 294, 1132, 1139
BseLI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
BseMII	CTCAG	5 cut(s)	89, 530, 641, 800, 1134
BseNI	ACTGG	1 cut(s)	341
BseRI	GAGGAG	4 cut(s)	562, 1013, 1016, 1085
BseX3I	CGGCCG	2 cut(s)	72, 624
BseXI	GCAGC	4 cut(s)	299, 527, 592, 832
BseYI	CCCAGC	2 cut(s)	597, 823
Bsh1236I	CGCG	3 cut(s)	384, 505, 894
Bsh1285I	CGRYCG	4 cut(s)	75, 627, 758, 1101
BshFI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BsiEI	CGRYCG	4 cut(s)	75, 627, 758, 1101
BsiHKAI	GWGCWC	2 cut(s)	785, 1123
BsiHKCI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
BsiWI	CGTACG	1 cut(s)	633
BslFI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
BslI	CCNNNNNNNGG	8 cut(s)	101, 157, 214, 336, 406, 772, 852, 1130
BsmAI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
BsnI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
Bso31I	GGTCTC	1 cut(s)	774
BsoBI	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
Bsp119I	TTCGAA	2 cut(s)	23, 430
Bsp1286I	GDGCHC	2 cut(s)	785, 1123
Bsp13I	TCCGGA	1 cut(s)	1123
Bsp143I	GATC	2 cut(s)	3, 64
Bsp19I	CCATGG	1 cut(s)	660
BspANI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BspCNI	CTCAG	5 cut(s)	90, 529, 642, 801, 1135
BspEI	TCCGGA	1 cut(s)	1123
BspFNI	CGCG	3 cut(s)	384, 505, 894
BspLI	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	1 cut(s)	59
BspT104I	TTCGAA	2 cut(s)	23, 430
BspTNI	GGTCTC	1 cut(s)	774
BsrBI	CCGCTC	3 cut(s)	102, 957, 1087
BsrFI	RCCGGY	2 cut(s)	736, 765
BsrI	ACTGG	1 cut(s)	341
BssAI	RCCGGY	2 cut(s)	736, 765
BssECI	CCNNGG	8 cut(s)	47, 361, 389, 610, 621, 660, 875, 911
BssMI	GATC	2 cut(s)	3, 64
BssNI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BssSI	CACGAG	1 cut(s)	457
BssT1I	CCWWGG	1 cut(s)	660
Bst2BI	CACGAG	1 cut(s)	457
Bst4CI	ACNGT	1 cut(s)	20
BstACI	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
BstBAI	YACGTR	1 cut(s)	320
BstBI	TTCGAA	2 cut(s)	23, 430
BstC8I	GCNNGC	5 cut(s)	376, 418, 491, 657, 689
BstDEI	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
BstDSI	CCRYGG	2 cut(s)	47, 660
BstENI	CCTNNNNNAGG	1 cut(s)	155
BstF5I	GGATG	4 cut(s)	33, 294, 1132, 1139
BstFNI	CGCG	3 cut(s)	384, 505, 894
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	3 cut(s)	180, 317, 505
BstKTI	GATC	2 cut(s)	6, 67
BstMAI	GTCTC	5 cut(s)	112, 447, 747, 774, 843
BstMBI	GATC	2 cut(s)	3, 64
BstMCI	CGRYCG	4 cut(s)	75, 627, 758, 1101
BstMWI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
BstNSI	RCATGY	1 cut(s)	691
BstSFI	CTRYAG	1 cut(s)	919
BstUI	CGCG	3 cut(s)	384, 505, 894
BstV1I	GCAGC	4 cut(s)	299, 527, 592, 832
BstZI	CGGCCG	2 cut(s)	72, 624
BsuRI	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
BtgI	CCRYGG	2 cut(s)	47, 660
BtrI	CACGTC	1 cut(s)	40
BtsCI	GGATG	4 cut(s)	33, 294, 1132, 1139
BtsI	GCAGTG	1 cut(s)	439
BtsIMutI	CAGTG	1 cut(s)	439
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	5 cut(s)	376, 418, 491, 657, 689
CfoI	GCGC	3 cut(s)	180, 317, 505
Cfr10I	RCCGGY	2 cut(s)	736, 765
Cfr13I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
Cfr9I	CCCGGG	3 cut(s)	361, 875, 911
CseI	GACGC	4 cut(s)	94, 272, 660, 792
Csp6I	GTAC	4 cut(s)	82, 397, 534, 634
CviAII	CATG	4 cut(s)	332, 661, 688, 852
CviQI	GTAC	4 cut(s)	82, 397, 534, 634
DdeI	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
DpnI	GATC	2 cut(s)	5, 66
DpnII	GATC	2 cut(s)	3, 64
EaeI	YGGCCR	2 cut(s)	72, 624
EagI	CGGCCG	2 cut(s)	72, 624
EciI	GGCGGA	1 cut(s)	403
Ecl136II	GAGCTC	1 cut(s)	783
EclXI	CGGCCG	2 cut(s)	72, 624
Eco130I	CCWWGG	1 cut(s)	660
Eco24I	GRGCYC	1 cut(s)	785
Eco31I	GGTCTC	1 cut(s)	774
Eco47I	GGWCC	3 cut(s)	211, 327, 339
Eco47III	AGCGCT	1 cut(s)	179
Eco52I	CGGCCG	2 cut(s)	72, 624
Eco53kI	GAGCTC	1 cut(s)	783
Eco72I	CACGTG	1 cut(s)	320
Eco88I	CYCGRG	5 cut(s)	361, 388, 609, 875, 911
EcoICRI	GAGCTC	1 cut(s)	783
EcoNI	CCTNNNNNAGG	1 cut(s)	155
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	1075
EcoT14I	CCWWGG	1 cut(s)	660
EcoT38I	GRGCYC	1 cut(s)	785
ErhI	CCWWGG	1 cut(s)	660
Esp3I	CGTCTC	1 cut(s)	112
FaeI	CATG	4 cut(s)	335, 664, 691, 855
FaiI	YATR	6 cut(s)	242, 333, 662, 689, 698, 853
FaqI	GGGAC	5 cut(s)	26, 313, 591, 894, 1049
FatI	CATG	4 cut(s)	331, 660, 687, 851
FauI	CCCGC	4 cut(s)	383, 887, 962, 1080
FblI	GTMKAC	1 cut(s)	1092
FokI	GGATG	4 cut(s)	20, 301, 1139, 1146
FriOI	GRGCYC	1 cut(s)	785
FspBI	CTAG	1 cut(s)	537
FspI	TGCGCA	1 cut(s)	316
GlaI	GCGC	3 cut(s)	179, 316, 504
GsaI	CCCAGC	2 cut(s)	601, 827
GsuI	CTGGAG	2 cut(s)	158, 1103
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	6 cut(s)	74, 374, 438, 626, 659, 1046
HgaI	GACGC	4 cut(s)	94, 272, 660, 792
HhaI	GCGC	3 cut(s)	180, 317, 505
Hin1I	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
Hin1II	CATG	4 cut(s)	335, 664, 691, 855
Hin6I	GCGC	3 cut(s)	178, 315, 503
HinP1I	GCGC	3 cut(s)	178, 315, 503
HincII	GTYRAC	3 cut(s)	115, 618, 1093
HindII	GTYRAC	3 cut(s)	115, 618, 1093
HphI	GGTGA	4 cut(s)	8, 46, 118, 772
Hpy166II	GTNNAC	4 cut(s)	115, 262, 618, 1093
Hpy188III	TCNNGA	4 cut(s)	974, 1057, 1082, 1124
Hpy8I	GTNNAC	4 cut(s)	115, 262, 618, 1093
Hpy99I	CGWCG	7 cut(s)	65, 312, 641, 676, 706, 715, 808
HpyAV	CCTTC	6 cut(s)	198, 361, 364, 442, 823, 939
HpyCH4III	ACNGT	1 cut(s)	20
HpyCH4IV	ACGT	3 cut(s)	39, 123, 319
HpyCH4V	TGCA	4 cut(s)	444, 543, 820, 962
HpyF10VI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
HpyF3I	CTNAG	6 cut(s)	98, 516, 584, 650, 809, 1143
HpySE526I	ACGT	3 cut(s)	39, 123, 319
Hsp92I	GRCGYC	5 cut(s)	105, 123, 264, 671, 803
Hsp92II	CATG	4 cut(s)	335, 664, 691, 855
HspAI	GCGC	3 cut(s)	178, 315, 503
Kpn2I	TCCGGA	1 cut(s)	1123
Kzo9I	GATC	2 cut(s)	3, 64
LmnI	GCTCC	6 cut(s)	498, 577, 909, 1003, 1084, 1126
Lsp1109I	GCAGC	4 cut(s)	299, 527, 592, 832
LweI	GCATC	1 cut(s)	891
MaeI	CTAG	1 cut(s)	537
MaeII	ACGT	3 cut(s)	39, 123, 319
MaeIII	GTNAC	2 cut(s)	124, 983
MalI	GATC	2 cut(s)	5, 66
MbiI	CCGCTC	3 cut(s)	102, 957, 1087
MboI	GATC	2 cut(s)	3, 64
MboII	GAAGA	2 cut(s)	553, 737
MfeI	CAATTG	1 cut(s)	963
MhlI	GDGCHC	2 cut(s)	785, 1123
MluCI	AATT	3 cut(s)	963, 1075, 1153
MlyI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 613, 638, 928, 1034
MmeI	TCCRAC	8 cut(s)	53, 92, 216, 228, 246, 962, 974, 1111
MroI	TCCGGA	1 cut(s)	1123
MseI	TTAA	1 cut(s)	789
MspA1I	CMGCKG	2 cut(s)	649, 823
MunI	CAATTG	1 cut(s)	963
MvnI	CGCG	3 cut(s)	384, 505, 894
MwoI	GCNNNNNNNGC	6 cut(s)	184, 321, 580, 652, 665, 1118
NcoI	CCATGG	1 cut(s)	660
NdeII	GATC	2 cut(s)	3, 64
NlaIII	CATG	4 cut(s)	335, 664, 691, 855
NlaIV	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
NmeAIII	GCCGAG	3 cut(s)	100, 602, 652
NmuCI	GTSAC	2 cut(s)	124, 983
NsbI	TGCGCA	1 cut(s)	316
NspI	RCATGY	1 cut(s)	691
NspV	TTCGAA	2 cut(s)	23, 430
PaeI	GCATGC	1 cut(s)	691
PcsI	WCGNNNNNNNCGW	9 cut(s)	201, 316, 474, 480, 629, 707, 710, 993, 1098
PfeI	GAWTC	3 cut(s)	25, 728, 946
Pfl23II	CGTACG	1 cut(s)	633
PflFI	GACNNNGTC	1 cut(s)	754
PflMI	CCANNNNNTGG	1 cut(s)	852
PleI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 612, 637, 928, 1033
PmaCI	CACGTG	1 cut(s)	320
PmlI	CACGTG	1 cut(s)	320
PpsI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 612, 637, 928, 1033
Ppu21I	YACGTR	1 cut(s)	320
PpuMI	RGGWCCY	1 cut(s)	327
PshBI	ATTAAT	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	785
Psp5II	RGGWCCY	1 cut(s)	327
PspCI	CACGTG	1 cut(s)	320
PspFI	CCCAGC	2 cut(s)	597, 823
PspLI	CGTACG	1 cut(s)	633
PspN4I	GGNNCC	5 cut(s)	213, 329, 412, 494, 1005
PspPI	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
PspPPI	RGGWCCY	1 cut(s)	327
PsyI	GACNNNGTC	1 cut(s)	754
PvuII	CAGCTG	1 cut(s)	823
RsaI	GTAC	4 cut(s)	83, 398, 535, 635
RsaNI	GTAC	4 cut(s)	82, 397, 534, 634
SacI	GAGCTC	1 cut(s)	785
SalI	GTCGAC	1 cut(s)	1091
SaqAI	TTAA	1 cut(s)	789
Sau3AI	GATC	2 cut(s)	3, 64
Sau96I	GGNCC	6 cut(s)	211, 327, 339, 373, 436, 1044
SchI	GAGTC	9 cut(s)	212, 239, 245, 449, 508, 613, 638, 928, 1034
SduI	GDGCHC	2 cut(s)	785, 1123
SfaNI	GCATC	1 cut(s)	891
SfcI	CTRYAG	1 cut(s)	919
SfuI	TTCGAA	2 cut(s)	23, 430
SgrAI	CRCCGGYG	1 cut(s)	736
SinI	GGWCC	3 cut(s)	211, 327, 339
SmaI	CCCGGG	3 cut(s)	363, 877, 913
SmlI	CTYRAG	1 cut(s)	1039
SmoI	CTYRAG	1 cut(s)	1039
SphI	GCATGC	1 cut(s)	691
Sse9I	AATT	3 cut(s)	963, 1075, 1153
SspMI	CTAG	1 cut(s)	537
SstI	GAGCTC	1 cut(s)	785
StyI	CCWWGG	1 cut(s)	660
TaaI	ACNGT	1 cut(s)	20
TaiI	ACGT	3 cut(s)	42, 126, 322
TaqII	GACCGA	2 cut(s)	356, 1115
TasI	AATT	3 cut(s)	963, 1075, 1153
TatI	WGTACW	1 cut(s)	81
TauI	GCSGC	8 cut(s)	105, 381, 384, 649, 671, 709, 736, 1009
TfiI	GAWTC	3 cut(s)	25, 728, 946
Tru1I	TTAA	1 cut(s)	789
Tru9I	TTAA	1 cut(s)	789
TscAI	CASTG	1 cut(s)	446
TseFI	GTSAC	2 cut(s)	124, 983
TseI	GCWGC	4 cut(s)	312, 540, 580, 820
Tsp45I	GTSAC	2 cut(s)	124, 983
TspDTI	ATGAA	2 cut(s)	807, 840
TspGWI	ACGGA	2 cut(s)	100, 896
TspMI	CCCGGG	3 cut(s)	361, 875, 911
TspRI	CASTG	1 cut(s)	446
Tth111I	GACNNNGTC	1 cut(s)	754
Van91I	CCANNNNNTGG	1 cut(s)	852
VpaK11BI	GGWCC	3 cut(s)	211, 327, 339
VspI	ATTAAT	1 cut(s)	789
XagI	CCTNNNNNAGG	1 cut(s)	155
XapI	RAATTY	1 cut(s)	1075
XceI	RCATGY	1 cut(s)	691
XmaI	CCCGGG	3 cut(s)	361, 875, 911
XmiI	GTMKAC	1 cut(s)	1092
XspI	CTAG	1 cut(s)	537
ZraI	GACGTC	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.