Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003417

Physical Location & Seq

Genomic Coordinates Reverse (-)

86801501 .. 86802580

Gene Structure 1080 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00149180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGTACTCCCCCTACCCCCTGAGCGGCGTCTCCGTCAACTCTGACGTCACCAATGCCAACAGCCCCTACCACCTCAACGAGGCTCTGGCCACTCTCCAGCGCTACTTGCCTTCCAACGAGGCTTCCGACCCGGACCCGGACTCGGACTCCGAGATTTCGGGTATGGACTCGGACTCTCCGGTCGACGCCTACTCCTGCGACCATTTTCGGATGTTTGAGTTCAAGGTCCGTCGCTGCGCACGTGGCAGGTCCCATGACTGGACCGACTGCCCCTTCGCCCACCCGGGCGAGAAGGCCCGCCGCCGCGACCCGAGGAAGTACCACTATTCGGGTTCCGCCTGCCCCGATTTCCGAAAGGGCCACTGCAAGAAGGGAGACTCGTGCGAGTTCGCTCACGGCGTTTTCGAGTGCTGGCTCCACCCTGCGCGTTATCGGACTCAGCCCTGTAAAGATGGTACTAGCTGCAAGAGGAGAGTGTGCTTCTTCGCTCACACGCCGGAGCAGCTTAGGGTTTTGCCCCAGCAGAGTCCCCGAGGGTCAGCTTCGGTCAACTCGGCCGAGTCGTACGACGGGTCGCCGCTGAGGCAGGCCATGGAGGCGGCGTCGTTGGGGAAAGGTATGCCGTTTATGTCGTCGCCGCCGTCGATTTCGCCGGAAGATTCGCCGCCGGTGTCTCCGATGACCAGGTCGGTGAGCCGGTCTCTGGGTTCGAGCTCGATTAATGAAATGGTGGCGTCGCTGAGGAACTTGCAGCTGGGGAAGGTCAAGTCTCTGCCCACTTCATGGAATGTTCAAGTCGGGTCGCCCGGGTTCGTTTCTCCACGCGGGTCGATGCTCCGTCCCGGGTTCTGTAGCCTGCCGTCCACTCCGACCCGGATTCCGACCCGCTCTGCTATTGGGTTTCTGGATTTCTGTGACGAGGGTTGCGAGGAGGAGGCGCCGATGGAGAGGGTGGAGTCTGGGAGGGACTTGAGGGCCAAGATGTTCGAGAGATTGAGGGAGGAGAATTCTCTGGAGCGGGTCGACCCGACCCAGGCACAGGCTCCGGATGTTGGATGGGTTTCTGAGCTGGTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008270 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0080090 GO:0090693 GO:0099402 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

359

Amino Acids

39.74

Weight (kDa)

6.52

Isoelectric Point (pI)

70.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	68 - 101	2.1e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	112 - 133	5.7e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19810 AT4G29190
fragaria_vesca	FvH4_1g06640 FvH4_2g32360
malus_domestica	MD02G1069500.v1.1 MD02G1304100.v1.1 MD08G1075000.v1.1 MD15G1062500.v1.1 MD15G1201300.v1.1
prunus_persica	Prupe.1G416500_v2.0.a1 Prupe.7G216200_v2.0.a1
pyrus_communis	pycom02g05500 pycom08g06180 pycom15g05920 pycom15g17880
rosa_chinensis	RchiOBHm_Chr2g0092381 RchiOBHm_Chr6g0310331
rosa_laevigata	RLG00000010491 RLG00000016304
rosa_multiflora	Rmu_co8369329.1_g000001 Rmu_sc0001195.1_g000002 Rmu_sc0002348.1_g000009
rosa_roxburghii	Rroxscaffold_2G00149180 Rroxscaffold_7G00158660
rosa_rugosa	Rorug02G0025600 Rorug06G0379100
rosa_samantha	Rh2AG071400 Rh2BG071100 Rh2CG072500 Rh2DG069800 Rh6AG493300 Rh6BG502900 Rh6CG507900 Rh6DG494000
rosa_wichuraiana	Rw2G006100 Rw6G042920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	179
AatII	GACGTC	1 cut(s)	48
Acc16I	TGCGCA	1 cut(s)	238
Acc36I	ACCTGC	1 cut(s)	237
AccB1I	GGYRCC	1 cut(s)	937
AccB7I	CCANNNNNTGG	1 cut(s)	783
AccBSI	CCGCTC	3 cut(s)	24, 888, 1018
AccI	GTMKAC	2 cut(s)	183, 1023
AccII	CGCG	3 cut(s)	306, 427, 825
AccIII	TCCGGA	1 cut(s)	1045
AcoI	YGGCCR	2 cut(s)	87, 555
AcsI	RAATTY	1 cut(s)	1006
AcvI	CACGTG	1 cut(s)	242
AcyI	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
AfaI	GTAC	4 cut(s)	5, 320, 457, 566
AfeI	AGCGCT	1 cut(s)	101
AgsI	TTSAA	2 cut(s)	223, 794
AjnI	CCWGG	2 cut(s)	683, 1032
AluBI	AGCT	6 cut(s)	462, 505, 542, 714, 754, 1069
AluI	AGCT	6 cut(s)	462, 505, 542, 714, 754, 1069
Alw21I	GWGCWC	1 cut(s)	716
Alw26I	GTCTC	5 cut(s)	34, 369, 678, 705, 774
Ama87I	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
Aor13HI	TCCGGA	1 cut(s)	1045
Aor51HI	AGCGCT	1 cut(s)	101
AoxI	GGCC	6 cut(s)	87, 294, 358, 555, 588, 975
ApeKI	GCWGC	4 cut(s)	234, 462, 502, 751
ApoI	RAATTY	1 cut(s)	1006
ArsI	GACNNNNNNTTYG	2 cut(s)	257, 289
AseI	ATTAAT	1 cut(s)	720
AspLEI	GCGC	4 cut(s)	102, 239, 427, 940
AspS9I	GGNCC	7 cut(s)	133, 226, 249, 261, 295, 358, 975
AsuC2I	CCSGG	9 cut(s)	131, 137, 284, 285, 807, 808, 843, 844, 874
AsuHPI	GGTGA	2 cut(s)	40, 703
AvaI	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
AvaII	GGWCC	4 cut(s)	133, 226, 249, 261
BalI	TGGCCA	1 cut(s)	89
BanI	GGYRCC	1 cut(s)	937
BanII	GRGCYC	1 cut(s)	716
BauI	CACGAG	1 cut(s)	379
BbrPI	CACGTG	1 cut(s)	242
Bbv12I	GWGCWC	1 cut(s)	716
BbvCI	CCTCAGC	2 cut(s)	581, 740
BbvI	GCAGC	4 cut(s)	221, 449, 514, 763
BccI	CCATC	3 cut(s)	446, 937, 1050
BceAI	ACGGC	4 cut(s)	412, 607, 625, 844
BciT130I	CCWGG	2 cut(s)	685, 1034
BcnI	CCSGG	9 cut(s)	131, 137, 284, 285, 807, 808, 843, 844, 874
BcoDI	GTCTC	5 cut(s)	34, 369, 678, 705, 774
BfaI	CTAG	1 cut(s)	459
BfmI	CTRYAG	1 cut(s)	850
BfoI	RGCGCY	2 cut(s)	103, 941
BfuAI	ACCTGC	1 cut(s)	237
BglI	GCCNNNNNGGC	2 cut(s)	583, 596
Bme18I	GGWCC	4 cut(s)	133, 226, 249, 261
BmeT110I	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
BmgT120I	GGNCC	7 cut(s)	133, 226, 249, 261, 295, 358, 975
BmiI	GGNNCC	6 cut(s)	135, 251, 334, 416, 939, 1044
BmsI	GCATC	1 cut(s)	822
BplI	GAGNNNNNCTC	2 cut(s)	685, 717
BpmI	CTGGAG	2 cut(s)	80, 1034
Bpu10I	CCTNAGC	4 cut(s)	20, 506, 581, 740
BpuEI	CTTGAG	1 cut(s)	991
BpuMI	CCSGG	9 cut(s)	131, 137, 284, 285, 807, 808, 843, 844, 874
BsaAI	YACGTR	1 cut(s)	242
BsaHI	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
BsaI	GGTCTC	1 cut(s)	705
BsaJI	CCNNGG	7 cut(s)	283, 311, 532, 591, 806, 842, 1032
BsaWI	WCCGGW	2 cut(s)	178, 1045
BsaXI	ACNNNNNCTCC	6 cut(s)	131, 161, 176, 206, 587, 617
Bse118I	RCCGGY	2 cut(s)	667, 696
Bse1I	ACTGG	1 cut(s)	263
BseAI	TCCGGA	1 cut(s)	1045
BseBI	CCWGG	2 cut(s)	685, 1034
BseDI	CCNNGG	7 cut(s)	283, 311, 532, 591, 806, 842, 1032
BseGI	GGATG	3 cut(s)	216, 1054, 1061
BseMII	CTCAG	5 cut(s)	11, 452, 572, 731, 1056
BseNI	ACTGG	1 cut(s)	263
BseRI	GAGGAG	4 cut(s)	484, 944, 947, 1016
BseX3I	CGGCCG	1 cut(s)	555
BseXI	GCAGC	4 cut(s)	221, 449, 514, 763
BseYI	CCCAGC	2 cut(s)	519, 754
Bsh1236I	CGCG	3 cut(s)	306, 427, 825
Bsh1285I	CGRYCG	2 cut(s)	183, 558
BshFI	GGCC	6 cut(s)	89, 296, 360, 557, 590, 977
BshNI	GGYRCC	1 cut(s)	937
BsiEI	CGRYCG	2 cut(s)	183, 558
BsiHKAI	GWGCWC	1 cut(s)	716
BsiHKCI	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
BsiWI	CGTACG	1 cut(s)	564
BslFI	GGGAC	4 cut(s)	235, 513, 825, 980
BsmAI	GTCTC	5 cut(s)	34, 369, 678, 705, 774
BsmBI	CGTCTC	1 cut(s)	34
BsmFI	GGGAC	4 cut(s)	235, 513, 825, 980
BsnI	GGCC	6 cut(s)	89, 296, 360, 557, 590, 977
Bso31I	GGTCTC	1 cut(s)	705
BsoBI	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
Bsp1286I	GDGCHC	1 cut(s)	716
Bsp13I	TCCGGA	1 cut(s)	1045
Bsp19I	CCATGG	1 cut(s)	591
BspANI	GGCC	6 cut(s)	89, 296, 360, 557, 590, 977
BspCNI	CTCAG	5 cut(s)	12, 451, 573, 732, 1057
BspEI	TCCGGA	1 cut(s)	1045
BspFNI	CGCG	3 cut(s)	306, 427, 825
BspLI	GGNNCC	6 cut(s)	135, 251, 334, 416, 939, 1044
BspMI	ACCTGC	1 cut(s)	237
BspT107I	GGYRCC	1 cut(s)	937
BspTNI	GGTCTC	1 cut(s)	705
BsrBI	CCGCTC	3 cut(s)	24, 888, 1018
BsrFI	RCCGGY	2 cut(s)	667, 696
BsrI	ACTGG	1 cut(s)	263
BssAI	RCCGGY	2 cut(s)	667, 696
BssECI	CCNNGG	7 cut(s)	283, 311, 532, 591, 806, 842, 1032
BssNI	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
BssSI	CACGAG	1 cut(s)	379
BssT1I	CCWWGG	1 cut(s)	591
Bst2BI	CACGAG	1 cut(s)	379
Bst2UI	CCWGG	2 cut(s)	685, 1034
BstACI	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
BstBAI	YACGTR	1 cut(s)	242
BstC8I	GCNNGC	5 cut(s)	298, 340, 413, 588, 857
BstDEI	CTNAG	6 cut(s)	20, 438, 506, 581, 740, 1065
BstDSI	CCRYGG	1 cut(s)	591
BstENI	CCTNNNNNAGG	1 cut(s)	77
BstF5I	GGATG	3 cut(s)	216, 1054, 1061
BstFNI	CGCG	3 cut(s)	306, 427, 825
BstH2I	RGCGCY	2 cut(s)	103, 941
BstHHI	GCGC	4 cut(s)	102, 239, 427, 940
BstMAI	GTCTC	5 cut(s)	34, 369, 678, 705, 774
BstMCI	CGRYCG	2 cut(s)	183, 558
BstMWI	GCNNNNNNNGC	5 cut(s)	106, 243, 502, 583, 596
BstNI	CCWGG	2 cut(s)	685, 1034
BstSFI	CTRYAG	1 cut(s)	850
BstUI	CGCG	3 cut(s)	306, 427, 825
BstV1I	GCAGC	4 cut(s)	221, 449, 514, 763
BstZI	CGGCCG	1 cut(s)	555
BsuRI	GGCC	6 cut(s)	89, 296, 360, 557, 590, 977
BtgI	CCRYGG	1 cut(s)	591
BtsCI	GGATG	3 cut(s)	216, 1054, 1061
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	1 cut(s)	361
BveI	ACCTGC	1 cut(s)	237
Cac8I	GCNNGC	5 cut(s)	298, 340, 413, 588, 857
CfoI	GCGC	4 cut(s)	102, 239, 427, 940
Cfr10I	RCCGGY	2 cut(s)	667, 696
Cfr13I	GGNCC	7 cut(s)	133, 226, 249, 261, 295, 358, 975
Cfr9I	CCCGGG	3 cut(s)	283, 806, 842
CseI	GACGC	4 cut(s)	16, 194, 591, 723
CsiI	ACCWGGT	1 cut(s)	683
Csp6I	GTAC	4 cut(s)	4, 319, 456, 565
CviAII	CATG	3 cut(s)	254, 592, 783
CviQI	GTAC	4 cut(s)	4, 319, 456, 565
DdeI	CTNAG	6 cut(s)	20, 438, 506, 581, 740, 1065
DinI	GGCGCC	1 cut(s)	939
DrdI	GACNNNNNNGTC	1 cut(s)	179
DseDI	GACNNNNNNGTC	1 cut(s)	179
EaeI	YGGCCR	2 cut(s)	87, 555
EagI	CGGCCG	1 cut(s)	555
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	1 cut(s)	714
EclXI	CGGCCG	1 cut(s)	555
Eco130I	CCWWGG	1 cut(s)	591
Eco24I	GRGCYC	1 cut(s)	716
Eco31I	GGTCTC	1 cut(s)	705
Eco47I	GGWCC	4 cut(s)	133, 226, 249, 261
Eco47III	AGCGCT	1 cut(s)	101
Eco52I	CGGCCG	1 cut(s)	555
Eco53kI	GAGCTC	1 cut(s)	714
Eco72I	CACGTG	1 cut(s)	242
Eco88I	CYCGRG	5 cut(s)	283, 310, 531, 806, 842
EcoICRI	GAGCTC	1 cut(s)	714
EcoNI	CCTNNNNNAGG	1 cut(s)	77
EcoO109I	RGGNCCY	1 cut(s)	249
EcoRI	GAATTC	1 cut(s)	1006
EcoRII	CCWGG	2 cut(s)	683, 1032
EcoT14I	CCWWGG	1 cut(s)	591
EcoT38I	GRGCYC	1 cut(s)	716
EgeI	GGCGCC	1 cut(s)	939
EheI	GGCGCC	1 cut(s)	939
ErhI	CCWWGG	1 cut(s)	591
Esp3I	CGTCTC	1 cut(s)	34
FaeI	CATG	3 cut(s)	257, 595, 786
FaiI	YATR	6 cut(s)	164, 255, 593, 620, 629, 784
FaqI	GGGAC	4 cut(s)	235, 513, 825, 980
FatI	CATG	3 cut(s)	253, 591, 782
FauI	CCCGC	4 cut(s)	305, 818, 893, 1011
FblI	GTMKAC	2 cut(s)	183, 1023
FokI	GGATG	3 cut(s)	223, 1061, 1068
FriOI	GRGCYC	1 cut(s)	716
FspBI	CTAG	1 cut(s)	459
FspI	TGCGCA	1 cut(s)	238
GlaI	GCGC	4 cut(s)	101, 238, 426, 939
GsaI	CCCAGC	2 cut(s)	523, 758
GsuI	CTGGAG	2 cut(s)	80, 1034
HaeII	RGCGCY	2 cut(s)	103, 941
HaeIII	GGCC	6 cut(s)	89, 296, 360, 557, 590, 977
HgaI	GACGC	4 cut(s)	16, 194, 591, 723
HhaI	GCGC	4 cut(s)	102, 239, 427, 940
Hin1I	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
Hin1II	CATG	3 cut(s)	257, 595, 786
Hin6I	GCGC	4 cut(s)	100, 237, 425, 938
HinP1I	GCGC	4 cut(s)	100, 237, 425, 938
HincII	GTYRAC	4 cut(s)	37, 184, 550, 1024
HindII	GTYRAC	4 cut(s)	37, 184, 550, 1024
HphI	GGTGA	2 cut(s)	40, 703
Hpy166II	GTNNAC	5 cut(s)	37, 184, 550, 864, 1024
Hpy188III	TCNNGA	4 cut(s)	905, 988, 1013, 1046
Hpy8I	GTNNAC	5 cut(s)	37, 184, 550, 864, 1024
Hpy99I	CGWCG	7 cut(s)	188, 234, 572, 607, 637, 646, 739
HpyAV	CCTTC	5 cut(s)	120, 283, 286, 364, 754
HpyCH4IV	ACGT	2 cut(s)	45, 241
HpyCH4V	TGCA	3 cut(s)	366, 465, 751
HpyF10VI	GCNNNNNNNGC	5 cut(s)	106, 243, 502, 583, 596
HpyF3I	CTNAG	6 cut(s)	20, 438, 506, 581, 740, 1065
HpySE526I	ACGT	2 cut(s)	45, 241
Hsp92I	GRCGYC	6 cut(s)	27, 45, 186, 602, 734, 938
Hsp92II	CATG	3 cut(s)	257, 595, 786
HspAI	GCGC	4 cut(s)	100, 237, 425, 938
KasI	GGCGCC	1 cut(s)	937
Kpn2I	TCCGGA	1 cut(s)	1045
LmnI	GCTCC	5 cut(s)	420, 499, 840, 1015, 1048
Lsp1109I	GCAGC	4 cut(s)	221, 449, 514, 763
LweI	GCATC	1 cut(s)	822
MabI	ACCWGGT	1 cut(s)	683
MaeI	CTAG	1 cut(s)	459
MaeII	ACGT	2 cut(s)	45, 241
MaeIII	GTNAC	2 cut(s)	46, 914
MbiI	CCGCTC	3 cut(s)	24, 888, 1018
MboII	GAAGA	2 cut(s)	475, 668
MhlI	GDGCHC	1 cut(s)	716
MlsI	TGGCCA	1 cut(s)	89
MluCI	AATT	2 cut(s)	1006, 1075
MluNI	TGGCCA	1 cut(s)	89
Mly113I	GGCGCC	1 cut(s)	938
MlyI	GAGTC	9 cut(s)	134, 140, 161, 167, 371, 430, 535, 569, 965
MmeI	TCCRAC	5 cut(s)	138, 150, 893, 905, 1033
Mox20I	TGGCCA	1 cut(s)	89
MroI	TCCGGA	1 cut(s)	1045
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	1 cut(s)	720
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	2 cut(s)	580, 754
MvaI	CCWGG	2 cut(s)	685, 1034
MvnI	CGCG	3 cut(s)	306, 427, 825
MwoI	GCNNNNNNNGC	5 cut(s)	106, 243, 502, 583, 596
NarI	GGCGCC	1 cut(s)	938
NciI	CCSGG	9 cut(s)	131, 137, 284, 285, 807, 808, 843, 844, 874
NcoI	CCATGG	1 cut(s)	591
NlaIII	CATG	3 cut(s)	257, 595, 786
NlaIV	GGNNCC	6 cut(s)	135, 251, 334, 416, 939, 1044
NmeAIII	GCCGAG	2 cut(s)	533, 583
NmuCI	GTSAC	2 cut(s)	46, 914
NsbI	TGCGCA	1 cut(s)	238
PcsI	WCGNNNNNNNCGW	8 cut(s)	123, 238, 396, 402, 560, 638, 641, 924
PfeI	GAWTC	2 cut(s)	659, 877
Pfl23II	CGTACG	1 cut(s)	564
PflFI	GACNNNGTC	1 cut(s)	685
PflMI	CCANNNNNTGG	1 cut(s)	783
PleI	GAGTC	9 cut(s)	134, 140, 161, 167, 371, 430, 534, 568, 964
PluTI	GGCGCC	1 cut(s)	941
PmaCI	CACGTG	1 cut(s)	242
PmlI	CACGTG	1 cut(s)	242
PpsI	GAGTC	9 cut(s)	134, 140, 161, 167, 371, 430, 534, 568, 964
Ppu21I	YACGTR	1 cut(s)	242
PpuMI	RGGWCCY	1 cut(s)	249
PshBI	ATTAAT	1 cut(s)	720
Psp124BI	GAGCTC	1 cut(s)	716
Psp5II	RGGWCCY	1 cut(s)	249
Psp6I	CCWGG	2 cut(s)	683, 1032
PspCI	CACGTG	1 cut(s)	242
PspFI	CCCAGC	2 cut(s)	519, 754
PspGI	CCWGG	2 cut(s)	683, 1032
PspLI	CGTACG	1 cut(s)	564
PspN4I	GGNNCC	6 cut(s)	135, 251, 334, 416, 939, 1044
PspPI	GGNCC	7 cut(s)	133, 226, 249, 261, 295, 358, 975
PspPPI	RGGWCCY	1 cut(s)	249
PsyI	GACNNNGTC	1 cut(s)	685
PvuII	CAGCTG	1 cut(s)	754
RsaI	GTAC	4 cut(s)	5, 320, 457, 566
RsaNI	GTAC	4 cut(s)	4, 319, 456, 565
SacI	GAGCTC	1 cut(s)	716
SalI	GTCGAC	2 cut(s)	182, 1022
SaqAI	TTAA	1 cut(s)	720
Sau96I	GGNCC	7 cut(s)	133, 226, 249, 261, 295, 358, 975
SchI	GAGTC	9 cut(s)	134, 140, 161, 167, 371, 430, 535, 569, 965
SduI	GDGCHC	1 cut(s)	716
SexAI	ACCWGGT	1 cut(s)	683
SfaNI	GCATC	1 cut(s)	822
SfcI	CTRYAG	1 cut(s)	850
SfoI	GGCGCC	1 cut(s)	939
SgrAI	CRCCGGYG	1 cut(s)	667
SinI	GGWCC	4 cut(s)	133, 226, 249, 261
SmaI	CCCGGG	3 cut(s)	285, 808, 844
SmlI	CTYRAG	1 cut(s)	970
SmoI	CTYRAG	1 cut(s)	970
Sse9I	AATT	2 cut(s)	1006, 1075
SspDI	GGCGCC	1 cut(s)	937
SspMI	CTAG	1 cut(s)	459
SstI	GAGCTC	1 cut(s)	716
StyI	CCWWGG	1 cut(s)	591
TaiI	ACGT	2 cut(s)	48, 244
TaqI	TCGA	8 cut(s)	183, 405, 644, 710, 716, 830, 987, 1023
TaqII	GACCGA	2 cut(s)	278, 535
TasI	AATT	2 cut(s)	1006, 1075
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	7 cut(s)	27, 303, 306, 580, 602, 640, 667
TfiI	GAWTC	2 cut(s)	659, 877
Tru1I	TTAA	1 cut(s)	720
Tru9I	TTAA	1 cut(s)	720
TscAI	CASTG	1 cut(s)	368
TseFI	GTSAC	2 cut(s)	46, 914
TseI	GCWGC	4 cut(s)	234, 462, 502, 751
Tsp45I	GTSAC	2 cut(s)	46, 914
TspDTI	ATGAA	2 cut(s)	738, 771
TspGWI	ACGGA	3 cut(s)	22, 218, 827
TspMI	CCCGGG	3 cut(s)	283, 806, 842
TspRI	CASTG	1 cut(s)	368
Tth111I	GACNNNGTC	1 cut(s)	685
Van91I	CCANNNNNTGG	1 cut(s)	783
VpaK11BI	GGWCC	4 cut(s)	133, 226, 249, 261
VspI	ATTAAT	1 cut(s)	720
XagI	CCTNNNNNAGG	1 cut(s)	77
XapI	RAATTY	1 cut(s)	1006
XmaI	CCCGGG	3 cut(s)	283, 806, 842
XmiI	GTMKAC	2 cut(s)	183, 1023
XspI	CTAG	1 cut(s)	459
ZraI	GACGTC	1 cut(s)	46

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.